mRNA_L-elsbetiae_contig5435.13675.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5435.13675.1 vs. uniprot
Match: D7G793_ECTSI (Mannitol 1-phosphate dehydrogenase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G793_ECTSI) HSP 1 Score: 431 bits (1107), Expect = 5.020e-146 Identity = 225/306 (73.53%), Postives = 245/306 (80.07%), Query Frame = 1 Query: 322 PKSEKVYKADDTLVRESDIENCRAYDECDISPETLGTPYGEDNKKASPAGGAAAQSAEYDRSRFHVHFGAGRLGLGLVVGSIAESKTPFGVVQRPKASWGGIISNGCGAQIEITVNGKPVVEDMTVISEGCDVEEYLKVGIAAMVVVGDRPTLLQLVRKATSFSCSLGAAMSIAMIPLLEQLEDKPLDERPVLYACENDHDAVRRVGKLVTSKVTTIPCMVDRICTGRQIGEFEVNVEAEPNFEGALVLLKPPKDPALVPFAGERVLIPTTEEEASYFYKRKFSIVNGMHTVLGFMTLREKAPGVR 1239 P ++VYKADDT+VRESDIENCR YDECD+SPETLGTP+G+ A + YDRSRFHVHFGAGRLGLGLVVG+IAESKTPFG+VQRPKASWGGIISNGCG+QIEITVNGKPVVED+TVISEGCDVEEYLKVG+AAMVVVGDRPTL QLV+KATSFSCSLGAAM IAMIPLLEQLED P ERPVLYACE ++VNVEAEPNFEGALVLL+PP D +LVPFAG+RVLIP+TEEEASYFYKRKFSIVNGMHTVLGFMTLREKAPG + Sbjct: 15 PDPKQVYKADDTIVRESDIENCRTYDECDLSPETLGTPFGDKTGXXXXXXXXAKEG--YDRSRFHVHFGAGRLGLGLVVGAIAESKTPFGIVQRPKASWGGIISNGCGSQIEITVNGKPVVEDVTVISEGCDVEEYLKVGVAAMVVVGDRPTLTQLVKKATSFSCSLGAAMGIAMIPLLEQLEDMPPAERPVLYACE-----------------------------------YDVNVEAEPNFEGALVLLQPPADKSLVPFAGDRVLIPSTEEEASYFYKRKFSIVNGMHTVLGFMTLREKAPGAK 283
BLAST of mRNA_L-elsbetiae_contig5435.13675.1 vs. uniprot
Match: A0A2Z4BWZ7_SACJA (Mannitol-1-phosphate dehydrogenase 2 n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2Z4BWZ7_SACJA) HSP 1 Score: 291 bits (745), Expect = 2.110e-92 Identity = 142/163 (87.12%), Postives = 154/163 (94.48%), Query Frame = 1 Query: 751 MVVVGDRPTLLQLVRKATSFSCSLGAAMSIAMIPLLEQLEDKPLDERPVLYACENDHDAVRRVGKLVTSKVTTIPCMVDRICTGRQIGEFEVNVEAEPNFEGALVLLKPPKDPALVPFAGERVLIPTTEEEASYFYKRKFSIVNGMHTVLGFMTLREKAPGVR 1239 MVVVGDRPTLLQLVRKATSFSCSLGAAM+IAMIPLL +LEDKP +ERPVLYACENDHDAVRRVG++VTSKVTT+PCMVDRICTGRQIGE+EVNVEAEPNF G+LVLL PP DP+LVPFAG VLIP+T EEASYFYKRKFS+VNGMHTVLGFMTLREKAPG + Sbjct: 1 MVVVGDRPTLLQLVRKATSFSCSLGAAMTIAMIPLLSELEDKPFEERPVLYACENDHDAVRRVGEMVTSKVTTVPCMVDRICTGRQIGEYEVNVEAEPNFGGSLVLLDPPSDPSLVPFAGTTVLIPSTREEASYFYKRKFSVVNGMHTVLGFMTLREKAPGAK 163
BLAST of mRNA_L-elsbetiae_contig5435.13675.1 vs. uniprot
Match: A0A6H5KKX3_9PHAE (M1PDH protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKX3_9PHAE) HSP 1 Score: 243 bits (619), Expect = 1.080e-73 Identity = 117/136 (86.03%), Postives = 127/136 (93.38%), Query Frame = 1 Query: 832 MSIAMIPLLEQLEDKPLDERPVLYACENDHDAVRRVGKLVTSKVTTIPCMVDRICTGRQIGEFEVNVEAEPNFEGALVLLKPPKDPALVPFAGERVLIPTTEEEASYFYKRKFSIVNGMHTVLGFMTLREKAPGVR 1239 M IAMIPLLEQLEDKP ERPVLYACENDHDA RRVG++V SKVTT+PCMVDRICTGRQ GE++VNVEAEPNFEGALVLL+PP D +LVPFAG+RVLIP+TEEEASYFYKRKFSIVNGMHTVLGFMTLREKAPG + Sbjct: 1 MGIAMIPLLEQLEDKPPAERPVLYACENDHDAARRVGEMVASKVTTVPCMVDRICTGRQXGEYDVNVEAEPNFEGALVLLQPPADKSLVPFAGDRVLIPSTEEEASYFYKRKFSIVNGMHTVLGFMTLREKAPGAK 136
BLAST of mRNA_L-elsbetiae_contig5435.13675.1 vs. uniprot
Match: A0A7S4DE76_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DE76_HETAK) HSP 1 Score: 214 bits (544), Expect = 3.880e-60 Identity = 110/236 (46.61%), Postives = 157/236 (66.53%), Query Frame = 1 Query: 511 FHVHFGAGRLGLGLVVGSIAESKTPFGVVQRPKASWGGIISNGCGAQIEITVNGKPVVEDMTVISEGCDVEEYLKVGIAAMVVVGDRPTLLQ-LVRKATSFSCSLGAAMSIAMIPLLEQLEDKPLDERPVLYACENDHDAVRRVGKLVTSKVTTIPCMVDRICTGRQIGEFEVNVEAEPNFEGALVLLKPPKDPALVPFAGERVLIPTTEEEASYFYKRKFSIVNGMHTVLGFMTL 1215 FH HFGAGRLGLGLV +I S P+ VVQRPK +W I G G+ + ITVNG+PVV++M V + +Y+ G ++ ++G +L+ L +++TSFSC+LG+A ++PL+ +L + +RP+LYACENDH V + K + +V I CMVDRICTGR I ++++AEP F G++VLL PP +VP GE V +P+++ EA +FY+RK +VNGMHT L F+TL Sbjct: 89 FHTHFGAGRLGLGLVAPAIERSGVPYCVVQRPKTTWKAISKTGSGSALAITVNGEPVVKEMKVALGDLEAADYI--GAQSLALLGSNLEVLKDLTQQSTSFSCALGSAAKKVLVPLMMELPVRGPGKRPILYACENDHGMVDIISKQLEGRVDVISCMVDRICTGRTIEANRIDIQAEP-FGGSIVLLDPPNRGHIVPLGGESVTVPSSKAEAEFFYERKLFLVNGMHTTLAFLTL 321
BLAST of mRNA_L-elsbetiae_contig5435.13675.1 vs. uniprot
Match: A0A7S1TN81_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TN81_9STRA) HSP 1 Score: 202 bits (514), Expect = 8.260e-56 Identity = 124/296 (41.89%), Postives = 177/296 (59.80%), Query Frame = 1 Query: 352 DTLVRESDIENCRAYDECDISPETLGTPYGED-------NKKASPAGGAAAQSAEYDRSRFHVHFGAGRLGLGLVVGSIAESKTPFGVVQRPKASWGGI-ISNGCGAQIEITVNGKPVVEDMTVISEGCDVEEYLKVGIAAMVVVGDRPTLLQLVRKATSFSCSLGAAMSIAMIPLLEQLEDKPLDERPVLYACENDHDAVRRVGKLVTSKVTTIPCMVDRICTGRQIGEFEVNVEAEPNFEGALVLLKPPKDPALVPFAGERVLIPTTEEEASYFYKRKFSIVNGMHTVLGFMTL 1215 +T S+I C D C++S E L G D ++A A A ++ HVHFGAGRLG+GLVV +IA + PF VVQRPK W + +S ++++ +N V + V++ D+ ++L +V G QL +AT+ SCSLGAAM+ M PLL+ L P+ E+PVLY CENDH AV R+ + + +V + CMVDR+CTGR+I + V+V+AEP ++GA+V+L+P + VPF+ E ++P T+ EA Y +RKFS+VNGMHTVL FMTL Sbjct: 207 ETAFTLSNIHRCIEEDICELSDEVLLRALGPDAEEQIAAREEAGNIEEAVAADTATVETKLHVHFGAGRLGMGLVVPAIAATGVPFAVVQRPKKRWQELWMSPHELDELDLCINDGVVAHRVRVVNSN-DMPDFLPP--QTLVFGGADEETKQLAGRATTLSCSLGAAMAKVMAPLLKDLPKVPIQEQPVLYCCENDHAAVARLSRTLAGRVRVVDCMVDRVCTGRRITKQGVHVDAEP-WKGAIVVLEPGLEN--VPFSDEIAVVPRTDREAQYLSERKFSLVNGMHTVLAFMTL 496
BLAST of mRNA_L-elsbetiae_contig5435.13675.1 vs. uniprot
Match: A0A7S1XK18_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XK18_9STRA) HSP 1 Score: 202 bits (514), Expect = 2.920e-55 Identity = 124/296 (41.89%), Postives = 177/296 (59.80%), Query Frame = 1 Query: 352 DTLVRESDIENCRAYDECDISPETLGTPYGED-------NKKASPAGGAAAQSAEYDRSRFHVHFGAGRLGLGLVVGSIAESKTPFGVVQRPKASWGGI-ISNGCGAQIEITVNGKPVVEDMTVISEGCDVEEYLKVGIAAMVVVGDRPTLLQLVRKATSFSCSLGAAMSIAMIPLLEQLEDKPLDERPVLYACENDHDAVRRVGKLVTSKVTTIPCMVDRICTGRQIGEFEVNVEAEPNFEGALVLLKPPKDPALVPFAGERVLIPTTEEEASYFYKRKFSIVNGMHTVLGFMTL 1215 +T S+I C D C++S E L G D ++A A A ++ HVHFGAGRLG+GLVV +IA + PF VVQRPK W + +S ++++ +N V + V++ D+ ++L +V G QL +AT+ SCSLGAAM+ M PLL+ L P+ E+PVLY CENDH AV R+ + + +V + CMVDR+CTGR+I + V+V+AEP ++GA+V+L+P + VPF+ E ++P T+ EA Y +RKFS+VNGMHTVL FMTL Sbjct: 64 ETAFTLSNIHRCIEEDICELSDEVLLRALGPDAEEQIAAREEAGNIEEAVAADTATVETKLHVHFGAGRLGMGLVVPAIAATGVPFAVVQRPKKRWQELWMSPHELDELDLCINDGVVAHRVRVVNSN-DMPDFLPP--QTLVFGGADEETKQLAGRATTLSCSLGAAMAKVMAPLLKDLPKVPIQEQPVLYCCENDHAAVARLSRTLAGRVRVVDCMVDRVCTGRRITKQGVHVDAEP-WKGAIVVLEPGLEN--VPFSDEIAVVPRTDREAQYLSERKFSLVNGMHTVLAFMTL 353
BLAST of mRNA_L-elsbetiae_contig5435.13675.1 vs. uniprot
Match: A0A7S2H2J6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2H2J6_9EUKA) HSP 1 Score: 190 bits (483), Expect = 3.500e-52 Identity = 111/261 (42.53%), Postives = 158/261 (60.54%), Query Frame = 1 Query: 505 SRFHVHFGAGRLGLGLVVGSIAESKTPFGVVQRPKASWGGIISNGCGAQ-----------------------IEITVNGKPVVEDMTVISEGCDVEEYLKVGIAAMVVVGDRPTLLQ-LVRKATSFSCSLGAAMSIAMIPLLEQLEDKPLDERPVLYACENDHDAVRRVGKLVTSKVTTIPCMVDRICTGRQIGEFEVNVEAEPNFEGALVLLKPPKDPALVPFAGERVLIPTTEEEASYFYKRKFSIVNGMHTVLGFMTL 1215 SRFHVHFGAGRLG+GLVV +I+ S F +VQR K W + G A+ ++IT N + VV ++ +I+ E I ++GD P +L + +ATSFSCSLG+ M A++P LE+L ++P D++P+L+ACENDH+AV + + + KV + CMVDR+CTGR+I E + V+AEP + G++V+L+P A +PF+ + +P TE EA Y RK S+VNGMHTVL FMTL Sbjct: 96 SRFHVHFGAGRLGMGLVVPAISASGIAFTIVQRSKPKWRYLFEKGLAAREKAQKPMPGLTEKEEEVEAWATGLDITSNEEVVVHNVQLITPEMAPEHMPPKSI----ILGDNPEMLHGVASRATSFSCSLGSGMIEALLPQLEKLPERPPDDQPLLFACENDHNAVYDLKQRLKDKVFVVDCMVDRVCTGREITENGIGVQAEP-WGGSIVILEPGVT-ARIPFSSKVATVPATEREAQYLSNRKLSLVNGMHTVLAFMTL 350
BLAST of mRNA_L-elsbetiae_contig5435.13675.1 vs. uniprot
Match: A0A7S0R5K6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0R5K6_9CHLO) HSP 1 Score: 192 bits (488), Expect = 4.670e-52 Identity = 106/251 (42.23%), Postives = 151/251 (60.16%), Query Frame = 1 Query: 511 FHVHFGAGRLGLGLVVGSIAESKTPFGVVQRPKASWGGIISNGCGAQIEITVNGKPVV------------EDMTVISEG-CDVEEYLKVGIAAMVVVGDRPTLLQLVRKATSFSCSLGAAMSIAMIPLLEQLEDKP-LDERPVLYACENDHDAVRRVGKLVTSKVTTIPCMVDRICTGRQIGEFEVNVEAEPN-FEGALVLLK-PPKDPALVPFAGERVLIPTTEEEASYFYKRKFSIVNGMHTVLGFMTL 1215 FHVHFGAGRLGLGLV+ ++ ES P+ ++QRP W + N QI++ +N + V +D+ I E CD E + + +V+ D+P +L+++ATSFSCS+G + + PLL+QL K + RPVLYACENDH+AV ++ + + +V +PCMVDRIC R + + E F G++++LK PP DP +P G+ V +P E A YFYKRK +VNGMHT LGF+TL Sbjct: 88 FHVHFGAGRLGLGLVLPALQESAIPYAILQRPSKEWSSLAWNHKDPQIKVLLNDEEAVPGGMHLYTNNNDKDLPEIGEAECDPESPEECYESHLVLTNDKPAWSKLIKQATSFSCSVGPTVHEWLGPLLKQLPIKDDVSSRPVLYACENDHNAVTKLSEQLEGRVQVVPCMVDRICARRTVDSDNGRIVVETEEFSGSIIMLKAPPVDPHRIPLQGDAVFVPEDAEVAEYFYKRKLLLVNGMHTALGFLTL 338
BLAST of mRNA_L-elsbetiae_contig5435.13675.1 vs. uniprot
Match: A0A8J2S2V5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S2V5_9STRA) HSP 1 Score: 194 bits (493), Expect = 5.110e-52 Identity = 129/335 (38.51%), Postives = 176/335 (52.54%), Query Frame = 1 Query: 352 DTLVRESDIENCRAYDECDISPETLGTPYGED---NKKASPAGGAAAQSAEYDRSRFHVHFGAGRLGLGLVVGSIAESKTPFGVVQRPKASWGGIISNGCGAQIEITVNGKPVVEDMTVISEGCDVEEYLKVGIAAMVVVGDRPTLLQLVRKATSFSCSLGAAMSIAMIPLL------------------EQLEDKPL--------------------------DERPVLYACENDHDAVRRVGKLVTSKVTTIPCMVDRICTGRQIGEFEVNVEAEPNFEGALVLLKPPKDPALVPFAGERVLIPTTEEEASYFYKRKFSIVNGMHTVLGFMTL 1215 +TL +D E C A D C++S E + YG D KA+ A +RFHVHFGAGRLGLGLVV +IA S PF VVQRPK W + +N +I+++VNG+ ++ V++ E V ++V L L+ +ATSFSCSLGAAM M L EQL + L D RPVLY ENDH++V R+ + + ++V + CMVDR+CTGR+IG V ++AEP + G++V+L+P DP VPFA +P + A Y +RKFS+VNGMHTV+ F+TL Sbjct: 109 ETLFSLADYETCLADDVCEVSDEIVDKAYGPDVLEKIKAARGEEETASIPSAKAARFHVHFGAGRLGLGLVVPAIAASGVPFAVVQRPKPRWEQLFANS--EEIDVSVNGEVKMKGAQVLAAHERPPET--VPATSLVFGASSEDLASLLSRATSFSCSLGAAMRRVMTSTLSALPEVVSETDVAIETRKEQLRSRKLRKRRQFDPSYESATDRVYSGDLSPEKDPRPVLYCAENDHESVARLKRELRTRVRVVDCMVDRVCTGRRIGPQGVEIDAEP-WPGSIVVLEPGFDPRYVPFAPSVATLPESLRHADYLSERKFSLVNGMHTVVAFLTL 438
BLAST of mRNA_L-elsbetiae_contig5435.13675.1 vs. uniprot
Match: D8LI09_ECTSI (Mannitol 1-phosphate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI09_ECTSI) HSP 1 Score: 191 bits (484), Expect = 1.530e-51 Identity = 111/266 (41.73%), Postives = 153/266 (57.52%), Query Frame = 1 Query: 475 AAAQSAEYDRSRFHVHFGAGRLGLGLVVGSIAESKTPFGVVQRPKASWGGIISNGCGAQIEITVNGKPVVEDMTVISEGCDVEEYLKVGIAAMVVVG------------DRPTLLQLVRKATSFSCSLGAAMSIAMIPLLEQLEDKPLDERPVLYACENDHDAVRRVGKLVTSKVTTIPCMVDRICTGRQIGEFEVNVEAEPNFEGALVLLKPPKDPALVPFAGERVLIPTTEEEASYFYKRKFSIVNGMHTVLGFMTLREKAPGV 1236 AA +A + FHVH GAGRLGLGLV+ +I S P+ +VQRP SW + G ++ + VNG+P +E M V+ G + G+AA+ G + +L L +AT+FS SLG +MS ++PLL +E K ERP LYACENDHDAV ++ + + +V + CMVDRICT R I + + EP+ G +V++ PP+ L PF G+ V IP EA YF +RK +VNGMHT L F+TL + GV Sbjct: 140 AALHAAVARLTTFHVHIGAGRLGLGLVIPAIHASGKPYAIVQRPSRSWAAVTDKE-GTEVGLKVNGEPTIEKMDVLKNG------MVGGVAALPGGGLGEESRVFACTDEAESLKALAERATTFSISLGPSMSDVVLPLLSCIEPKADGERPALYACENDHDAVHKLQEALEGRVDVVSCMVDRICTERTITADWIEMGTEPS-SGEIVVIAPPQGAPLPPFKGDHVQIPRIPAEAEYFCRRKILLVNGMHTTLAFITLCKLESGV 397 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5435.13675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5435.13675.1 >prot_L-elsbetiae_contig5435.13675.1 ID=prot_L-elsbetiae_contig5435.13675.1|Name=mRNA_L-elsbetiae_contig5435.13675.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=413bp APLALRAGKSHALSLCSAVPASLCHDMKKPSLMYRDRVLVLACLMLWPMRback to top mRNA from alignment at L-elsbetiae_contig5435:6233..12181+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5435.13675.1 ID=mRNA_L-elsbetiae_contig5435.13675.1|Name=mRNA_L-elsbetiae_contig5435.13675.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5949bp|location=Sequence derived from alignment at L-elsbetiae_contig5435:6233..12181+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5435:6233..12181+ >mRNA_L-elsbetiae_contig5435.13675.1 ID=mRNA_L-elsbetiae_contig5435.13675.1|Name=mRNA_L-elsbetiae_contig5435.13675.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2478bp|location=Sequence derived from alignment at L-elsbetiae_contig5435:6233..12181+ (Laminarionema elsbetiae ELsaHSoW15)back to top |