mRNA_L-elsbetiae_contig541.13641.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig541.13641.1 vs. uniprot
Match: D7FPZ9_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ9_ECTSI) HSP 1 Score: 284 bits (727), Expect = 2.910e-83 Identity = 185/333 (55.56%), Postives = 217/333 (65.17%), Query Frame = 1 Query: 2623 MPCLVAEAGAKRPGVDAIWG-GAAASTVSGSPGDLASSTGRA--GGPETKDGML-PAAISRVLHEEVFRVLALRRRDLDIVAHVSPELLQPAVAKSFWMFEDAISTRASHARALSNMGRLLENRGNPDEALLCFREASRADTGSAEALCYQAGNLQRRGDLDGAAIFFEGALARDASLWSAWYGLGQVKGTQGKHADAVEAFSKWLEGLKNADGEGRSDRSVSAANKPAREEVGGGAGEGAAMAKGLVQLGDAYRKLGQDKQAQSAYERAVSVDEGCSEAHFQLGSLLQ-----APALRSFALAVKAAGVAAVSAAGSGASQGPGGEPFPSFL 3594 MPCL+AE G+ VD GA ++T SG+ + +S+GR G T GML PA I+RVLHEEVFRVLAL RRDLDIVA VSPELLQ AV KSFWMFE+A+ T A+ + ALSNMGRLLE+RG+PDEALLCF+EAS AD RD S WSAW GLGQVKG Q K+A+AVEAFSKWL+G +G G ++ + + P E+V G MAKGLVQLG+A+ KLGQDKQA+SAYERAVS DE CSEAHFQLG+LLQ A AL++FA AVKAA VAA SGA +G E F SFL Sbjct: 1 MPCLMAEVGSV---VDVAGAEGAGSATASGTLAGVVASSGRRADGSSSTNYGMLLPAPIARVLHEEVFRVLALNRRDLDIVARVSPELLQSAVVKSFWMFEEAVFTAAARSHALSNMGRLLEDRGHPDEALLCFQEASTADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDESHWSAWCGLGQVKGAQAKYAEAVEAFSKWLQGGGGGEG-GAAENGNTGSGAPQAEKVAGAR----FMAKGLVQLGEAHVKLGQDKQARSAYERAVSADENCSEAHFQLGTLLQRCGQDAEALKAFASAVKAAAVAAARGPDSGAGEG-SKEAFSSFL 324
BLAST of mRNA_L-elsbetiae_contig541.13641.1 vs. uniprot
Match: A0A482S8G9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S8G9_9ARCH) HSP 1 Score: 85.9 bits (211), Expect = 4.390e-14 Identity = 63/227 (27.75%), Postives = 113/227 (49.78%), Query Frame = 1 Query: 85 ITVNMAG-KPIGLSLYPRLMSILATTDD-LNPHLRSSGWLLKRMDELRKAEQASFNAEEDYFNLDSGSRKH----LPFPAFAYKHFMNRHGIKRMVRSVCLDLMCNVQIYRKERPDVEVFARFMEEFYGQKELCFFLDLRAEAHRVARV-----CVPRVAAGTQ--AVLMTLPDCVRVAKGVFVDPTTLYFRDLIATMAADSAGAGGMWNSTRGRISLSAFLYLAMV 726 + V + G +P + YPR S++A D + P LR WL+K ++++ A F E++ + S L FP F + G+K ++ +C D++ +V YR++ ++E+FARF++EFY +L F+L +R+ +V V V G Q + M+ + V +A+ VF + +RD I + G+ TR RI ++ +L+L++V Sbjct: 97 VQVRIVGVEPFDYTAYPRFSSLIANRGDTVKPKLRPLSWLMKHVEDVY---DARFEHEKNEVEREDDSPAFDLILLIFPIFVVRKVGTNVGLKSLLDQMCWDILHSVNTYRRDYLELEIFARFLQEFYDHDDLLFYLYVRSVISKVLHVNFKNRWVKFDGPGRQPRSQWMSYREAVHIARIVFGSDSEDMYRDFILLITPQMIGSKTDTTDTR-RIDITEYLHLSVV 319
BLAST of mRNA_L-elsbetiae_contig541.13641.1 vs. uniprot
Match: A0A812U9B1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812U9B1_9DINO) HSP 1 Score: 85.1 bits (209), Expect = 6.600e-13 Identity = 64/220 (29.09%), Postives = 105/220 (47.73%), Query Frame = 1 Query: 121 SLYPRLMSILATTDDLNPHLRSSGWLLKRMDELRKAEQASFNAE-----EDYFNLDSG---SRKHLPFPAFAYKHFMNRHGIKRMVRSVCLDLMCNVQIYRKERPDVEVFARFMEEFYGQKELCFFLDLRAEAHRVARVC-------VPRVAAGT----QAVLMTLPDCVRVAKGVFV---DPTTLYFRDLIAT--MAADSAGAGGMWNSTRGRISLSAF 708 S+YP+ S+++ D++ P LR WL++ ++E+ A AE E + SR FP+F + F R+G+ +++ C DL+ NV RKE +VEVFARF+EE+Y +L FFL +R+ + R + + G +A+ M+ +C VA+ VF DP F L+ + A +A + ST G + + Sbjct: 96 SVYPKFYSLISLRDNIAPKLRPLSWLMRLIEEIYDNRYARDTAELREEAEGAAGATAAPPKSRGPSDFPSFVVEFFSKRYGLPQLIDQTCWDLLYNVHAARKEYLEVEVFARFLEEYYDPDDLLFFLYVRSVVQKELRFTFRSRWTELGKSVLGADKTPKAIFMSQRECQLVARVVFGAEGDPLYRTFMALVDSRLQAGPAAVSTRSGRSTGGELEARGY 315
BLAST of mRNA_L-elsbetiae_contig541.13641.1 vs. uniprot
Match: A0A7S3HLQ1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLQ1_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 4.400e-12 Identity = 57/213 (26.76%), Postives = 102/213 (47.89%), Query Frame = 1 Query: 127 YPRLMSILATTDD-LNPHLRSSGWLLKRMDELRKAEQASFNAEEDYFNLDSGSRKH----LPFPAFAYKHFMNRHGIKRMVRSVCLDLMCNVQIYRKERPDVEVFARFMEEFYGQKELCFFLDLRAEAHRVARVCVPR--------VAAGTQAVLMTLPDCVRVAKGVFVDPTTLYFRDLIATMAADSAGAGGMWNSTRGRISLSAFLYLAMV 726 YPR +++A D + P R W++K ++++ F+ E++ + S L FP F + G+K +V C DL+ NV +YRK+ ++EVF RF++EFY +L FFL +R+ +V + V+ +A+ ++ + VA+ VF FRD + + G +R RI ++ +L+L++V Sbjct: 108 YPRFTALIANNGDTVRPRQRPFTWVMKIVEDIF---DHRFSLEKNDIEREDESPSFDLMLLIFPVFVVRKIGTNVGLKTIVDQTCWDLLYNVNLYRKDYLELEVFGRFLQEFYDHDDLLFFLYVRSVLAKVLHISFKARWQKKFDGVSGQPKALWISYKEAAHVARIVFGSDNEGLFRDFMRLITPQMVGEKTASGDSR-RIDITEYLHLSVV 316
BLAST of mRNA_L-elsbetiae_contig541.13641.1 vs. uniprot
Match: A0A7S2E248_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E248_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 3.500e-9 Identity = 48/163 (29.45%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 271 DSGSRKHLPFPAFAYKHFMNRHGIKRMVRSVCLDLMCNVQIYRKERPDVEVFARFMEEFYGQKELCFFLDLRAEAHRVARVCV-------PRVAAGTQAVLMTLP--DCVRVAKGVFVDPTTLYFRDLIATMAADSAGAG--GMWNSTRGRISLSAFLYLAMV 726 ++ ++ FP F +HF RHG++ +V DL+ +V RK+R DVE+FARF++E Y +L FF+ LR+ ++ + R Q + L +CV VA+ VF + + D + + + G G TR RI ++ +LA+V Sbjct: 21 ENSEKEASSFPIFVIEHFAKRHGLQSLVDQFSWDLLYSVDSMRKDRLDVEIFARFLQEAYDTDDLLFFMYLRSVIQKMLNISFRNRWNTDSRRGQDRQPAQLWLSYRECVTVARTVFGNEDDAMYSDFLTVIESQLVGKKRHGHQADTR-RIDVNQLFHLAVV 182
BLAST of mRNA_L-elsbetiae_contig541.13641.1 vs. uniprot
Match: A0A2R5G9E0_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9E0_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.840e-8 Identity = 38/124 (30.65%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 127 YPRLMSILATTDDLNPHLRSSGWLLKRMDEL---RKAEQASFNAEEDYFNLDSGSRKHLPFPAFAYKHFMNRHGIKRMVRSVCLDLMCNVQIYRKERPDVEVFARFMEEFYGQKELCFFLDLRA 489 Y + S++ D L P RS WL ++++ R A ++ ++ EE FP F H R+G+++++ V D++ +V +R+ R +VEVFARF+EE+Y +++L F+L +R+ Sbjct: 162 YSKFCSLIEMRDKLEPRPRSLKWLNGLINDVYDDRAAVKSKYDLEELRI-----------FPVFVMDHLGKRYGLRQIIDQVAWDMVLSVHTHRRHRIEVEVFARFLEEYYDREDLRFYLRVRS 274 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig541.13641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig541.13641.1 >prot_L-elsbetiae_contig541.13641.1 ID=prot_L-elsbetiae_contig541.13641.1|Name=mRNA_L-elsbetiae_contig541.13641.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1200bp MYYIQYREEGTGGTGREEGGVGGQHPDGITVNMAGKPIGLSLYPRLMSILback to top mRNA from alignment at L-elsbetiae_contig541:28203..36631+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig541.13641.1 ID=mRNA_L-elsbetiae_contig541.13641.1|Name=mRNA_L-elsbetiae_contig541.13641.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8429bp|location=Sequence derived from alignment at L-elsbetiae_contig541:28203..36631+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig541:28203..36631+ >mRNA_L-elsbetiae_contig541.13641.1 ID=mRNA_L-elsbetiae_contig541.13641.1|Name=mRNA_L-elsbetiae_contig541.13641.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=7200bp|location=Sequence derived from alignment at L-elsbetiae_contig541:28203..36631+ (Laminarionema elsbetiae ELsaHSoW15)back to top |