mRNA_L-elsbetiae_contig541.13638.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig541.13638.1 vs. uniprot
Match: D7FQ19_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ19_ECTSI) HSP 1 Score: 448 bits (1153), Expect = 9.000e-152 Identity = 223/293 (76.11%), Postives = 254/293 (86.69%), Query Frame = 1 Query: 373 WFSTPLAPGASILLAAALLCTTSAQSPAETGWWPFSKR-PKSPFEDTVPRKAKRQRAKAEREMQEYLAKMRVPVQELIAGLRKGEVGREEFDKRMASFNNEVELATHRIIYGVSDPPDARRLFEAEHGSCRHTPDAIQAVSALSPLIEIGAGRGHWQRALSEAGAAVVSFDKWATNPGGGV--GTTAGIPQVGRVLPGDEHAIRLHRDKTLLLVYPPPGETAVRCLREYRGGALAYVGEGRGGVNASDAFFDGLDAEWEVTGVVELDPFPQCFERLYLLRRR-REAVDAQSPQ 1239 W S PLAPGASILLA AL C+ S SPAE GWWPFSKR P SPF +T+PR+AK+QRAKAE +M+ YLAKMR+PVQEL+AGLRKGEV REE+DKRM+ FN+EVELATHRII+GVSDPPDARR +EAEHG+CR+TP+AI+ +SALSPL+EIGAGRGHWQR LSEAGA V+SFDKWAT P G GTTAG+PQ+GRVLPGDEHA+RLHRDKTLLLVYPPPG+ A+RCL EYRG L YVGEGRGG NASD FFDGLDAEW+V +++LDPFPQCFERL+LLRRR R AV A S Q Sbjct: 55 WDSMPLAPGASILLAVAL-CSVSTDSPAEAGWWPFSKRQPSSPFSNTIPRQAKKQRAKAEVQMRNYLAKMRMPVQELMAGLRKGEVTREEYDKRMSVFNDEVELATHRIIFGVSDPPDARRRYEAEHGNCRYTPEAIRLMSALSPLVEIGAGRGHWQRGLSEAGATVISFDKWATTPSSGNERGTTAGMPQIGRVLPGDEHALRLHRDKTLLLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGANASDEFFDGLDAEWDVENILDLDPFPQCFERLFLLRRRQRTAVGASSQQ 346
BLAST of mRNA_L-elsbetiae_contig541.13638.1 vs. uniprot
Match: F2U2F6_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U2F6_SALR5) HSP 1 Score: 172 bits (435), Expect = 1.950e-46 Identity = 88/203 (43.35%), Postives = 131/203 (64.53%), Query Frame = 1 Query: 622 EVGREEFDKRMASFNNEVELATHRIIYGVSDPPDARRLFEAEHGSCRHTPDAIQAVSALSPLIEIGAGRGHWQRALSEAGAAVVSFDKWATNPGGGVGTTAGIPQVGRVLPGDEHAIRLHRDKTLLLVYPPPGETAVRCLREYRGGALAYVGEGRGGVNASDAFFDGLDAEWEVTGVVELDPFPQCFERLYLLRRRREAVDAQ 1230 ++ REEF +++ + + L + IIYG ++ AR+ + A++G R T DA+ +++ SPLIEIGAG+GHW +AL + G V++FD +T G V +V PGD I + +TLLLVYPP + A++C +E+RG L YVGE RGGVNA+DAFF+ +D +++ + +LDPFP+C ERLY+LRR+ E AQ Sbjct: 17 DMSREEFQQQLWALRERINLDSQIIIYGTAER-HARQKYLAKYGCARWTEDALNTIASFSPLIEIGAGQGHWAKALRKLGVDVMAFDNDSTEQ-------PGTAPVSQVRPGDHTKIGWYPRRTLLLVYPPETDMALQCAQEFRGNYLIYVGEARGGVNANDAFFNHVDEQFDCVHIQDLDPFPRCHERLYVLRRKPEHRTAQ 211
BLAST of mRNA_L-elsbetiae_contig541.13638.1 vs. uniprot
Match: A0A250XG93_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XG93_9CHLO) HSP 1 Score: 176 bits (445), Expect = 6.830e-46 Identity = 89/198 (44.95%), Postives = 125/198 (63.13%), Query Frame = 1 Query: 619 GEVGREEFDKRMASFNNEVELATHRIIYGVSDPPDARRLFEAEHGSCRHTPDAIQAVSALSPLIEIGAGRGHWQRALSEAGAAVVSFDKWATNPGGGVGTTAGIPQVGRVLPGDEHAIRLHRDKTLLLVYPPPGETAVRCLREYRGGALAYVGEGRGGVNASDAFFDGLDAEWEVTGVVELDPFPQCFERLYLLRRRR 1212 GE G + F + + EV+L + +II+GV D P+AR+ + +G R T +A+Q + + SPLIEIG G GHWQ+AL+ GA V++FD + P G+ VG V G+E IR H +TLLLVYP P + + CL EYRG L YVGE RGG+N ++ FF+ L+ EW VV LDPFP +E+LY+L+R++ Sbjct: 185 GERGEKWFQEELRKLEPEVDLQSQKIIFGV-DEPNARKSYLERYGCTRWTEEALQVIKSFSPLIEIGGGHGHWQKALTSIGADVLAFDDGSALP------VLGMDNVGEVQKGNEKEIRRHPRRTLLLVYPGPTDMGLNCLNEYRGRYLLYVGEPRGGINGNEQFFNELEREWTCERVVPLDPFPDGYEQLYILKRKQ 375
BLAST of mRNA_L-elsbetiae_contig541.13638.1 vs. uniprot
Match: A0A061SI58_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SI58_9CHLO) HSP 1 Score: 167 bits (423), Expect = 1.760e-43 Identity = 91/189 (48.15%), Postives = 120/189 (63.49%), Query Frame = 1 Query: 643 DKRMASFNNEVELATHRIIYGVSDPPDARRLFEAEHGSCRHTPDAIQAVSALSPLIEIGAGRGHWQRALSEAGAAVVSFDKWATNPGGGVGTTAGIPQVGRVLPGDEHAIRLHRDKTLLLVYPPPGETAVRCLREYRGGALAYVGEGRGGVNASDAFFDGLDAEWEVTGVVELDPFPQCFERLYLLRRR 1209 ++R+ +F +EV+ T I+YGV + AR + A++G + +AI+AV+ SPLIEIGAG+G WQ LS GA +++FD A P +P VG V GD +R HR +TLLL YP GE A +CL Y G L YVGEGRGGVNA+D FF L+AEW V++L PFP FERL++LRRR Sbjct: 126 ERRLGAFRDEVDQETQIILYGVRER-GARARYMAKYGCAAWSEEAIRAVAGFSPLIEIGAGKGQWQAELSRRGADIIAFDNGAAVP------CPELPAVGEVRHGDHRELRRHRGRTLLLCYPE-GEMAEQCLELYGGEWLLYVGEGRGGVNATDEFFRRLEAEWVCEQVIQLQPFPGNFERLFVLRRR 306
BLAST of mRNA_L-elsbetiae_contig541.13638.1 vs. uniprot
Match: A0A7S1RWX2_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RWX2_ALECA) HSP 1 Score: 153 bits (386), Expect = 1.610e-38 Identity = 78/179 (43.58%), Postives = 111/179 (62.01%), Query Frame = 1 Query: 679 LATHRIIYGVSDPPDARRLFEAEHGSCRHTPDAIQAVSALSPLIEIGAGRGHWQRALSEAGAAVVSFDKWATNPGGGVGTTAGIPQVGRVLPGDEHAIRLHRDKTLLLVYPPPGETAVRCLREYRGGALAYVGEGRGGVNASDAFFDGLDAEWEVTGVVELDPFPQCFERLYLLRRRRE 1215 LA HR++Y P + RR E E+G+ + T A+ A A+SPL+E+GAGRG WQRAL+ GA V+++D ++ T G+ +G+V G E +R H D+ +LLVYP PG A CL Y G L YVGEGRGGVN DAFFD + A+W++ +D P +E +Y+L+R ++ Sbjct: 127 LAAHRLLYPTLSPEELRRRRE-EYGAVKWTEAALHAAVAVSPLVEVGAGRGQWQRALAGLGADVLAYDDMSSPS-----TRLGL--IGQVSQGSEDVVRRHADRAMLLVYPNPGPMAYNCLGNYAGDTLVYVGEGRGGVNGDDAFFDAVSADWKLIRSEPVDRLPGGYEHMYILQRLKK 297
BLAST of mRNA_L-elsbetiae_contig541.13638.1 vs. uniprot
Match: A0A835Z4B6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B6_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.010e-37 Identity = 91/209 (43.54%), Postives = 119/209 (56.94%), Query Frame = 1 Query: 682 ATHRIIYGVSDPPDARRLFEAEHGSCRHTPDAIQAVSALSPLIEIGAGRGHWQRALSEAGAAVVSF--------------DKWATNPGGGVGTTAGIPQVGRVLPGDEHAIRLHRDKTL--------LLVYPPPGETAVRCLREYRGGALAYVGEGRGGVNASDAFFDGLDAEWEVTGVVELDPFPQCFERLYLLRRR-REAVDAQSPQ 1239 AT RI YGV+D AR +E + G R T A+ A +A SPLIE + L+ A AA F D A + G A +P VG+V PGDE A+ H D+TL LLVYPPPG+ A+RC+R Y G + YVGEGRGGVNA +AFF L+ W+V V+ L+PFP+CFER+++LRR+ ++A D S Q Sbjct: 126 ATQRIAYGVTDD-GARARYERDFGCARWTEAALAAAAAYSPLIEAS----NAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQQAADPPSKQ 329
BLAST of mRNA_L-elsbetiae_contig541.13638.1 vs. uniprot
Match: A0A7S4Q4L8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q4L8_9DINO) HSP 1 Score: 145 bits (365), Expect = 8.990e-36 Identity = 75/156 (48.08%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 679 LATHRIIY-GVSDPPDARRLFEAEHGSCRHTPDAIQAVSALSPLIEIGAGRGHWQRALSEAGAAVVSFDKWATNPGGGVGTTAGIPQVGRVLPGDEHAIRLHRDKTLLLVYPPPGETAVRCLREYRGGALAYVGEGRGGVNASDAFFDGLDAEWEV 1143 L HR++Y G+S P+ R EHG+ + T A+Q A+SPL+E+GAGRG WQ+AL+E GA V+++D ++ T + +G+V G+E +R H D+ LLLVYP PG A +CL Y G AL YVGEGRGGVN DAFFD L AEW + Sbjct: 130 LEAHRLLYPGLS--PEELRTRRQEHGAVKWTEKALQVAVAMSPLLEVGAGRGQWQKALTERGANVLAYDDMSS-------PTVRLGLIGQVNRGNEEVVRRHADRALLLVYPNPGPMARKCLENYAGDALVYVGEGRGGVNGDDAFFDLLSAEWRL 276
BLAST of mRNA_L-elsbetiae_contig541.13638.1 vs. uniprot
Match: A9V137_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V137_MONBE) HSP 1 Score: 140 bits (353), Expect = 5.930e-34 Identity = 77/194 (39.69%), Postives = 107/194 (55.15%), Query Frame = 1 Query: 673 VELATHRIIYGVSDPPDARRL----------------FEAEHGSCRHTPDAIQAVSALSPLIEIGAGRGHWQRALSEAGAAVVSFDKWATNPGGGVGTTAGIPQVGRVLPGDEHAIRLHRDKTLLLVYPPPGETAVRCLREYRGGALAYVGEGRGGVNASDAFFDGLDAEWEVTGVVELDPFPQCFERLYLLRR 1206 E+ I G S+P D +R + +G R T A++ + SP++E+GAG+G WQRAL+EAGA VV+FD ++ VG+V GDE + + +TLLLVYPP + A R L Y+G L YVGE RGGVNA++ FFD L+A+W+ L PF +C+ERLY+ RR Sbjct: 89 AEMREKFIKLGASEPDDLKRAELYAKFREDVLRDTQAYLDTYGCARWTDSALELIKEFSPIVELGAGQGQWQRALTEAGANVVAFDNESS-------LQPSNQPVGKVYSGDEQKLGWYPYRTLLLVYPPDSDMAQRALDRYKGRYLIYVGEARGGVNANEEFFDTLEADWDCVHRENLAPFSRCYERLYVFRR 275
BLAST of mRNA_L-elsbetiae_contig541.13638.1 vs. uniprot
Match: A0A2R5GST6_9STRA (MFS_1_like domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GST6_9STRA) HSP 1 Score: 142 bits (359), Expect = 2.740e-32 Identity = 82/242 (33.88%), Postives = 139/242 (57.44%), Query Frame = 1 Query: 490 KSPFEDTVPRKAKRQRAKAEREMQEYLAKMRVPVQELIAGLRKGEVGREEFDKRMASFNNEVELATHRIIYGVS-DPPDARRLFEAEHGSCRHTPDAIQAVSALSPLIEIGAGRGHWQRALSEAGAA-VVSFDKWATNPGGGVGTTAGIPQVGRVLPGDEHAIRLHRDKTLLLVYPPPGETAVRCLREYRGGALAYVGEGRGGVNASDAFFDGLDAEWEVTGVVELDPFPQCFERLYLLRRR 1209 KSPF K + R ERE+ + A+ R + L + +GE+ E+ + V R+I+GVS + AR + +G + + A+Q ++AL P++E+GAG G W++ L++ ++++D ++ + + + G VL G+E +R HRD+TLLLV PPP E A +C+ YRG L YVGEGRGG +A FF+ L+++WEV ++++ PF +C+E+ ++L+R+ Sbjct: 465 KSPFMYPELEKGIKVREARERELLDLRARARNRIFLLQERVGRGELSEREYRMEIHKLKEAVNRDAQRLIFGVSPEQAHARDEYLQAYGCVKWSEQAMQKIAALGPIVELGAGYGQWRQELAQQHKVDIIAYDDYSQLY---LPSEKAREETG-VLEGNETVLRKHRDRTLLLVCPPPNEMASKCMSAYRGDRLVYVGEGRGGAHADSDFFNTLESKWEVEEIIDVLPFSECYEKCFILKRK 702
BLAST of mRNA_L-elsbetiae_contig541.13638.1 vs. uniprot
Match: A0A139AZJ9_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AZJ9_GONPJ) HSP 1 Score: 133 bits (335), Expect = 2.850e-32 Identity = 78/211 (36.97%), Postives = 112/211 (53.08%), Query Frame = 1 Query: 625 VGREEFDKRMASFNNEVELATHRIIYGVSDPPDARRLFEAEHGSCRHTPDAIQAVSALS-PLIEIGAGRGHWQRALSEAGAAVVSFDKWATNPGG---------------GVGTTAGIPQVGRVLPGDEHAIRLHRD-KTLLLVYPPPGETAVRCLREYRGGALAYVGEGRGGVNASDAFFDGLDAEWEVTGVVELDPFPQCFERLYLLRR 1206 + R F+ R+ + EVE + RI+YG + P +RR + + +G + T DA+ A++AL P++E+GAG GHW++AL AG VV++D W+ PG G VG+VL G H + LLLVYP P A L Y G L YVGE GG NA+ FF L W+V V+E++PF ER+++L+R Sbjct: 8 MARSVFEGRLDAMRKEVEKESERILYGPTAP--SRRAYLSSYGCTKPTTDAVSAIAALGQPIVEMGAGVGHWEKALRTAGVDVVAYDDWSAVPGADDEPVAKGRATEHSPGPCENESAALVGKVLHGTPDVTLPHNPGRALLLVYPGPDAMAEDSLTHYSGSTLVYVGENAGGANATPRFFQELQRAWKVVKVMEVEPFSGGCERMWILKR 216 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig541.13638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig541.13638.1 >prot_L-elsbetiae_contig541.13638.1 ID=prot_L-elsbetiae_contig541.13638.1|Name=mRNA_L-elsbetiae_contig541.13638.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=357bp MNRLAVAIAARSPSTLHRRVQQQGWPARLSKSRPRQATTTAIVHRLASTSback to top mRNA from alignment at L-elsbetiae_contig541:3652..6661+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig541.13638.1 ID=mRNA_L-elsbetiae_contig541.13638.1|Name=mRNA_L-elsbetiae_contig541.13638.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3010bp|location=Sequence derived from alignment at L-elsbetiae_contig541:3652..6661+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig541:3652..6661+ >mRNA_L-elsbetiae_contig541.13638.1 ID=mRNA_L-elsbetiae_contig541.13638.1|Name=mRNA_L-elsbetiae_contig541.13638.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2142bp|location=Sequence derived from alignment at L-elsbetiae_contig541:3652..6661+ (Laminarionema elsbetiae ELsaHSoW15)back to top |