mRNA_L-elsbetiae_contig5385.13596.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5385.13596.1
Unique NamemRNA_L-elsbetiae_contig5385.13596.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5385.13596.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 4.630e-88
Identity = 145/298 (48.66%), Postives = 202/298 (67.79%), Query Frame = 1
Query:   31 GMSYCDKHVGGGDDLFWSYPYTDPPVLEPGLNLVFPNVNRLEIPFLSITAKPTPDFSEYWIGGIEGPVVRIPADDRNTKQIFDVVDLSELPL---FYLDFEEGLLDLAFDPMFSDN---NFFYISHTINTGTKGDVHRYNRISRFTHVPNNPADTLDTELVILTSAQKFNSIHSAGWLDFTPSAFRSPGNFN--DLYWTTGDGGPQTDPYGATQTLDNLLGSMIRISVPTFEGFESASGLPYNIPSGNYEDVTGTSAAPEVCAVGFRNPFRCSFDSLNDNLWCGDIGQVDVESIYIIE 900
            G SYCD H GGG+D FWSYPY +P + EPGLN VFP++   E P  +++ + TPD S++W+ GI G +  + +D+ +  ++  V+D+S       FY+D+EEGLLD+AF PMFS++   N+FY+S+T++     D+ + NR++RFT++P +P  T  +E V+LT+  K+NSIHSAGWL F PS +   GN +  DLYWTTGDGGPQTDP   +Q    +LG+M+RI+VP+        G  Y IPSGNY    G  A  E+CA+GFRNP+RCSFD  NDNL+CGD+G   VE I ++E
Sbjct:  131 GTSYCDHHTGGGNDFFWSYPYEEPEIFEPGLNEVFPDLGDGEQPDDTVSVRQTPDGSQWWLLGIAGEIYAVDSDNMDDSEL--VIDVSGSVTGGTFYVDYEEGLLDVAFGPMFSESGYPNYFYVSYTVDLND--DLMQRNRLARFTYIPGDPEGTKASEEVLLTTVPKYNSIHSAGWLGFKPSVY---GNSSPQDLYWTTGDGGPQTDPENHSQDTQTMLGAMMRITVPS-------DGDGYTIPSGNY----GGGALDEICAIGFRNPWRCSFDRENDNLYCGDVGHTFVEEIDLVE 410          
BLAST of mRNA_L-elsbetiae_contig5385.13596.1 vs. uniprot
Match: D7G962_ECTSI (GSDH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G962_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 8.330e-82
Identity = 139/295 (47.12%), Postives = 194/295 (65.76%), Query Frame = 1
Query:   34 MSYCDKHVGGGDDLFWSYPYTDPPVLEPGLNLVFPNVNRLEIPFLSITAKPTPDFSEYWIGGIEGPVVRIPADDRNTKQIFDVVDLSELPL---FYLDFEEGLLDLAFDPMFSDNNF---FYISHTINTGTKGDVHRYNRISRFTHVPNNPADTLDTELVILTSAQKFNSIHSAGWLDFTPSAFRSPGNFNDLYWTTGDGGPQTDPYGATQTLDNLLGSMIRISVPTFEGFESASGLPYNIPSGNYEDVTGTSAAPEVCAVGFRNPFRCSFDSLNDNLWCGDIGQVDVESIYIIE 900
            + YC KH GGGDDLFWSYPY +    +    L FP++   E P  +++ + TPD S++W+ GI G +  + +D  +  ++   V    +P    FY+DFEEGLLD+AF PMF DN++   FY+S+T+     G+  R NR++RFT+VP + A T  +E V+LT+  +F S+H+AGWL F PSA+ +PG + DLYWTTGDGGPQTDP+  +Q    +LG+M+RISVP       A G  Y IP GNY    G+ A  E+CA+G RNP+RCSFD LND+L+CGD+GQ+  E I ++E
Sbjct:   60 VDYCTKHTGGGDDLFWSYPYEEAVTCDLYSKL-FPDLGANEQPDDTVSMRQTPDGSQWWLLGISGQIYAVNSDSMDESELVIHV-AGPVPSGGSFYVDFEEGLLDVAFGPMFGDNSYPQYFYVSYTVLLDD-GENQR-NRLARFTYVPGDAAATRASEEVLLTTVPRFISVHAAGWLGFKPSAYGNPG-YQDLYWTTGDGGPQTDPFNHSQDETTMLGAMMRISVP-------ADGTGYTIPPGNYH---GSKA--EICAIGLRNPWRCSFDRLNDDLYCGDVGQISAEEINLVE 337          
BLAST of mRNA_L-elsbetiae_contig5385.13596.1 vs. uniprot
Match: A0A6H5JZF5_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF5_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 4.590e-76
Identity = 137/298 (45.97%), Postives = 189/298 (63.42%), Query Frame = 1
Query:   31 GMSYCDKHVGGGDDLFWSYPYTDPPVLEPGLNLVFPNVNRLEIPFLSITAKPTPDFSEYWIGGIEGPVVRIPADDRNTKQIFDVVDLSELPL---FYLDFEEGLLDLAFDPMFSDN---NFFYISHTINTGTKGDVHRYNRISRFTHVPNNPADTLDTELVILTSAQKFNSIHSAGWLDFTPSAFRSPGNFN--DLYWTTGDGGPQTDPYGATQTLDNLLGSMIRISVPTFEGFESASGLPYNIPSGNYEDVTGTSAAPEVCAVGFRNPFRCSFDSLNDNLWCGDIGQVDVESIYIIE 900
            G+SYCD H GGG D FWSYPY +P + EPGLN +FP++   E P  +++ +                  ++ +D+ +   +  V+D+S       FY+D+EEGLLD+AF PMFS++   N+FY+S+T++    G+V R NR++RFT++P +PA T  +E V+LTSA K  SIHSAGWL F PS +   GN +  DLYWTTGDGGPQTD     Q   ++LG+M+RI+VP+        G  Y IPSGNY    G  A  E+CA+GFRNP+RCSFD   D+L+CGD+G   VE I ++E
Sbjct:   86 GVSYCDHHTGGGADFFWSYPYEEPEIFEPGLNELFPDLGDGEQPSDTVSMR------------------QVDSDNMDDSSL--VIDVSGSVTDGTFYVDYEEGLLDVAFGPMFSESDYPNYFYVSYTVDLND-GEVQR-NRLARFTYIPGDPAGTKASEEVLLTSAPKSTSIHSAGWLGFKPSVY---GNASPQDLYWTTGDGGPQTDYNNHAQDTQSMLGAMMRITVPS-------DGSGYTIPSGNY----GGGALDEICAIGFRNPWRCSFDRETDDLYCGDVGHTFVEEIDLVE 347          
BLAST of mRNA_L-elsbetiae_contig5385.13596.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 2.340e-70
Identity = 131/275 (47.64%), Postives = 182/275 (66.18%), Query Frame = 1
Query:   97 DPPVLEPGLNLVFPNVNRLEIPFLSITAKPTPDFSEYWIGGIEGPVVRIPADDRNTKQIFDVVDLS-ELPL---FYLDFEEGLLDLAFDPMFSDNNF---FYISHTINTGTKGDVHRYNRISRFTHVPNNPADTLDTELVILTSAQKFNSIHSAGWLDFTPSAFRSPGNFNDLYWTTGDGGPQTDPYGATQTLDNLLGSMIRISVPTFEGFESASGLPYNIPSGNYEDVTGTSAAPEVCAVGFRNPFRCSFDSLNDNLWCGDIGQVDVESIYIIE 900
            D  + EPGLN VFP++   + P  +++ + TPD S++W+ GI G +  + +D  +  ++  V+D+S  +P    FY DFEEGLLD+AF PMF DN++   FY+S+T+     G++ R NR+++FT+ P +P  T  +E V+LT+  K+NSIHSAGWL F PS + +PG ++DLYWTTGDGGPQTDP+  +Q    +LG+M+RISVP       A G  Y IPSGNY       A  EVCA+G RNP+RC FD LND+L+CGD+G   VE I  IE
Sbjct:  106 DAEIFEPGLNEVFPDLADDQQPGDTVSMRQTPDGSQWWLLGISGQIYAVDSDSMDESEL--VIDVSGPVPSGGNFYDDFEEGLLDVAFGPMFGDNSYPQYFYVSYTVLLDD-GEMQR-NRLAKFTYFPEDPVATRASEEVLLTTVPKYNSIHSAGWLGFKPSDYGNPG-YSDLYWTTGDGGPQTDPFNHSQDETTMLGAMMRISVP-------ADGTGYTIPSGNYP-----GAKAEVCAIGLRNPWRCGFDRLNDDLYCGDVGHTLVEEINFIE 363          
BLAST of mRNA_L-elsbetiae_contig5385.13596.1 vs. uniprot
Match: D7G6T7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T7_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 9.900e-58
Identity = 116/244 (47.54%), Postives = 153/244 (62.70%), Query Frame = 1
Query:  187 TPDFSEYWIGGIEGPVVRIPADDRNTKQIFDVVDLSE---LPLFYLDFEEGLLDLAFDPMFSDNNF---FYISHTINTGTKGDVHRYNRISRFTHVPNNPADTLDTELVILTSAQKFNSIHSAGWLDFTPSAFRSPGNFNDLYWTTGDGGPQTDPYGATQTLDNLLGSMIRISVPTFEGFESASGLPYNIPSGNYEDVTGTSAAPEVCAVGFRNPFRCSFDSLNDNLWCGDIGQVDVESIYIIE 900
            TPD S YW+ G  G +  +  DD +T  +  VVD+S        Y+D+EEGLL LAF P+FS + +   FY+S+T+     G+  R NR+S+F +   +PA TL +E V+LTSA K  SIHSAGW+ F PSA+ +  +++D+YWTTGDG  QTDP    Q   NLLGS++RISVP       A G  Y IP+GN      + A PE+CA GFRNP+RCSFD   D L+CGD+G   VE I I+E
Sbjct:  119 TPDSSMYWLVGQAGEIKMVDLDDLST--MTTVVDISSGLSSGELYVDYEEGLLGLAFSPLFSTDGYPAYFYLSYTVELDD-GENQR-NRLSKFQYFAGDPAFTLASEEVLLTSAPKIGSIHSAGWVGFQPSAYGTIASYHDIYWTTGDGASQTDPENHGQDTTNLLGSVMRISVP-------ADGTGYEIPTGNL----ASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLVEEIDIVE 347          
BLAST of mRNA_L-elsbetiae_contig5385.13596.1 vs. uniprot
Match: D7FJN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN8_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 7.210e-57
Identity = 120/290 (41.38%), Postives = 171/290 (58.97%), Query Frame = 1
Query:   40 YCDKHVGGGDDLFWSYPYT-DPPVLEPGLNLVFPNVNRLEIPFLSITAKPTPDFSEYWIGGIEGPVVRIPADDRNTKQIFDVVDLSELPLFYLDFEEGLLDLAFDPMFSDNNFFYISHTINTGTKGDVHRYNRISRFTHVPNNPADTLDTELVILTSAQKFNSIHSAGWLDFTPSAFRSP--GNFNDLYWTTGDGGPQTDPYGATQTLDNLLGSMIRISVPTFEGFESASGLPYNIPSGNYEDVTGTSAAPEVCAVGFRNPFRCSFDSLNDNLWCGDIGQVDVESIYIIE 900
            YC+ H G   D +WSYP   D      GL   FP+++   IP   +  + TPD S++WI G++G +V +   D  + +   V+D+S L L+   FEEGLL +AF P F     FY S+       G     NR+SRF + PN+  +TL +E V++ S++K +++HSAGW+ F PS++ +   G  ++L+W  GD GPQ D +   Q  + L GS+IRI V +    E  SG  Y+IPSGN    +G     E+CA G RNP+RCSFD LND+L+CGD+G +DVESI  IE
Sbjct:  131 YCEVHAGPEGDQYWSYPLVIDDSFSTDGLVKAFPDLSDSSIPDEPVDMRMTPDGSKWWILGLKGQIVEVDVADPTSAKT--VLDMSSLILW--TFEEGLLSMAFSPAFHTTGVFYASYV-----NGPSFGTNRLSRFKYDPNSAENTLGSEEVLIISSEKQSNVHSAGWIGFKPSSYGNDAAGAVHELFWAMGDSGPQLDTFDRGQDPNILHGSIIRIGVSS----EMESG--YSIPSGN--PFSGGGGRGEICAQGMRNPYRCSFDRLNDDLYCGDVGHLDVESIKKIE 403          
BLAST of mRNA_L-elsbetiae_contig5385.13596.1 vs. uniprot
Match: D7G960_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G960_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 4.380e-54
Identity = 112/252 (44.44%), Postives = 146/252 (57.94%), Query Frame = 1
Query:  187 TPDFSEYWIGGIEGPVVRIPADDRNTKQIFDVVDLSELPL-----------FYLDFEEGLLDLAFDPMFSDNNF---FYISHTINTGTKGDVHRYNRISRFTHVPNNPADTLDTELVILTSAQKFNSIHSAGWLDFTPSAFRSPGNFNDLYWTTGDGGPQTDPYGATQTLDNLLGSMIRISVPTFEGFESASGLPYNIPSGNYEDVTGTSAAPEVCAVGFRNPFRCSFDSLNDNLWCGDIGQVDVESIYIIE 900
            T D+     G   G ++ +P      +   D +D SEL +           FY DFEEGLLD+AF PMF DN++   FY+S+T+     G+  R NR++RFT+VP + A T  +E V+LT+  K+NS+HSAGWL F PSA+ SPG + DLYWTTGDGGPQTDP+  +Q                        G  Y IP GNY       A  E+CA+G RNP+RCSFD LND+L+CGD+GQ+ VE I  IE
Sbjct:   28 TVDYCTKHTGRGGGLILVVPLRGSMRQVNLDSMDESELVIDVAGPVPSGGSFYGDFEEGLLDVAFGPMFGDNSYPQYFYVSYTVLLDD-GENQR-NRLARFTYVPGDAAATRASEEVLLTTVPKYNSVHSAGWLGFKPSAYGSPG-YQDLYWTTGDGGPQTDPFNHSQ-----------------------DGTGYTIPPGNYH-----GAKAEICAIGLRNPWRCSFDRLNDDLYCGDVGQISVEEINFIE 248          
BLAST of mRNA_L-elsbetiae_contig5385.13596.1 vs. uniprot
Match: A0A6H5KT40_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT40_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 3.630e-53
Identity = 124/312 (39.74%), Postives = 165/312 (52.88%), Query Frame = 1
Query:    4 VAFGGQAEF------GMSYCDKHVGGGDDLFWSYPYTDPPVLEPGLNLVFPNVNRLEIPFLSITAKPTPDFSEYWIGGIEGPVVRIPADDRNTKQIFDVVDLS-ELPL---FYLDFEEGLLDLAFDPMFSDNNF---FYISHTINTGTKGDVHRYNRISRFTHVPNNPADTLDTELVILTSAQKFNSIHSAGWLDFTPSAFRSPGNFNDLYWTTGDGGPQTDPYGATQTLDNLLGSMIRISVPTFEGFESASGLPYNIPSGNYEDVTGTSAAPEVCAVGFRNPFRCSFDSLNDNLWCGDIGQVDVESIYIIE 900
             A  GQ EF       + YC KH GGGDD FWSYPY +                R    FL +       +S +W+           +D  ++ ++  V+D++  +P    FY DFEEGLLD+ F PMFS  ++   FY+S+T+     G++ R NR++RFT+VP +P  T  TE V+LT+  K+NSIHSAGWL F PS + S                 TDP   +Q    +LG+M+RISVP+        G  Y IP GNY       A  EVCA+G RNP+RC FD LNDNL+CGD+G   VE I +IE
Sbjct:   42 TACDGQIEFPTYDSGSVDYCTKHTGGGDDFFWSYPYKE----------------RSLTGFLFL-------WSRWWVN----------SDSMDSSEL--VIDVAGPVPSGGNFYDDFEEGLLDVVFGPMFSVPSYPSYFYVSYTVLLDD-GEMQR-NRLARFTYVPGDPVATRATEEVLLTTVPKYNSIHSAGWLGFKPSDYGS-----------------TDPGNHSQDETTMLGAMMRISVPS-------DGTGYTIPPGNYP-----GAKAEVCAIGLRNPWRCGFDRLNDNLYCGDVGHTLVEEINLIE 287          
BLAST of mRNA_L-elsbetiae_contig5385.13596.1 vs. uniprot
Match: A0A6H5KS07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS07_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 2.200e-47
Identity = 112/292 (38.36%), Postives = 159/292 (54.45%), Query Frame = 1
Query:   40 YCDKHVGGGDDLFWSYPYT-DPPVLEPGLNLVFPNVNRLEIPFLSITAKPTPDFSEYWIGGIEGPVVRIPADDRNTKQIFDVVDLSELPLFYLDFEEGLLDLAFDPMFSDNNFFYISHTINTGTKGDVHRYNRISRFTHVPNNPADTLDTELVILTSAQKFNSIHSAGWLDFTPSAFR----SPGNFNDLYWTTGDGGPQTDPYGATQTLDNLLGSMIRISVPTFEGFESASGLPYNIPSGNYEDVTGTSAAPEVCAVGFRNPFRCSFDSLNDNLWCGDIGQVDVESIYIIE 900
            YC  H G   D +WSYP   D      GL   FP+++   IP   +  + TPD S++WI G++G +V +   D    +   V+D+S L L+   FEEGLL +AF P F     FY S+       G     NR+SRF + P++ A+TL +E +++TS++K +++HSAGW+ F PS++     S G  ++L+W  GD GPQ D     Q  + L GS+IRI V +  G            SG+ E              G RNP+RCSFD LND+L+CGD+G +DVESI  IE
Sbjct:   44 YCVVHAGPEGDQYWSYPLVIDDSFSTDGLVKAFPDLSDSLIPDEPVDMRMTPDGSKWWILGLKGQIVEVDVADATWAKT--VLDMSSLVLW--TFEEGLLSMAFSPAFHTTGVFYASYV-----NGPSFGTNRLSRFKYDPDSAANTLASEEILITSSEKKSNVHSAGWIGFKPSSYGNDAVSAGAVHELFWAMGDSGPQLDTSDRGQDPNILHGSIIRIEVSSEMG------------SGDKE--------------GMRNPYRCSFDRLNDDLYCGDVGHLDVESIKKIE 300          
BLAST of mRNA_L-elsbetiae_contig5385.13596.1 vs. uniprot
Match: A0A2T4WRJ1_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2T4WRJ1_9BACT)

HSP 1 Score: 120 bits (302), Expect = 1.680e-27
Identity = 79/192 (41.15%), Postives = 105/192 (54.69%), Query Frame = 1
Query:  322 EEGLLDLAFDPMFSDNNFFYISHTINTGTKGDVHRYNRISRFTHVPNNPADTLDTELVILTSAQKFNSIHSAGWLDFTPSAFRSPGNFNDLYWTTGDGGPQTDPYGATQTLDNLLGSMIRISVPTFEGFESASGLPYNIPSGNYEDVTGTSAAPEVCAVGFRNPFRCSFDSLNDNLWCGDIGQVDVESIYII 897
            E GLL LAF P +S N FFY+++   +G          ISRF+   N       TELVILT  Q + + H+ G L+F    +        LY ++GDGG   DP   +Q L  LLG ++RI V    G     G  Y+IP GN   ++  SAA E+ A G RNP++ SFDSLNDNLW  D+G +D+E I +I
Sbjct:   84 ERGLLGLAFHPDYSSNGFFYVNYINLSGNTV-------ISRFSVSANPEIADNTTELVILTYTQPYPN-HNGGDLNFGSDGY--------LYISSGDGGNFGDPDDNSQNLGTLLGKILRIDVNNTSG-----GNNYDIPLGN-PFISNGSAADEIWAYGLRNPWKFSFDSLNDNLWIADVGSLDIEEINMI 253          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5385.13596.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4P3_ECTSI4.630e-8848.66Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
D7G962_ECTSI8.330e-8247.12GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JZF5_9PHAE4.590e-7645.97GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G957_ECTSI2.340e-7047.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G6T7_ECTSI9.900e-5847.54WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJN8_ECTSI7.210e-5741.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G960_ECTSI4.380e-5444.44Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
A0A6H5KT40_9PHAE3.630e-5339.74GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KS07_9PHAE2.200e-4738.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2T4WRJ1_9BACT1.680e-2741.15Uncharacterized protein (Fragment) n=1 Tax=Bactero... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5385contigL-elsbetiae_contig5385:7534..11479 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score289.7
Seed ortholog evalue1.6e-75
Seed eggNOG ortholog2880.D7G4P3
KEGG rclassRC00194
KEGG koko:K04618,ko:K08254,ko:K11244,ko:K20929
KEGG ReactionR01098
KEGG Pathwayko00052,ko04011,ko04139,map00052,map04011,map04139
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC1.1.3.9,1.2.3.15,3.2.1.59
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons7
Model size905
Cds size903
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816561.8898778-CDS-L-elsbetiae_contig5385:7533..76791622816561.8898778-CDS-L-elsbetiae_contig5385:7533..7679Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5385 7534..7679 -
1691683648.88098-CDS-L-elsbetiae_contig5385:7533..76791691683648.88098-CDS-L-elsbetiae_contig5385:7533..7679Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5385 7534..7679 -
1622816561.901584-CDS-L-elsbetiae_contig5385:8221..84021622816561.901584-CDS-L-elsbetiae_contig5385:8221..8402Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5385 8222..8402 -
1691683648.8972404-CDS-L-elsbetiae_contig5385:8221..84021691683648.8972404-CDS-L-elsbetiae_contig5385:8221..8402Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5385 8222..8402 -
1622816561.9156585-CDS-L-elsbetiae_contig5385:8829..89941622816561.9156585-CDS-L-elsbetiae_contig5385:8829..8994Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5385 8830..8994 -
1691683648.9056754-CDS-L-elsbetiae_contig5385:8829..89941691683648.9056754-CDS-L-elsbetiae_contig5385:8829..8994Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5385 8830..8994 -
1622816561.9325044-CDS-L-elsbetiae_contig5385:9613..96971622816561.9325044-CDS-L-elsbetiae_contig5385:9613..9697Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5385 9614..9697 -
1691683648.9134824-CDS-L-elsbetiae_contig5385:9613..96971691683648.9134824-CDS-L-elsbetiae_contig5385:9613..9697Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5385 9614..9697 -
1622816561.9427114-CDS-L-elsbetiae_contig5385:10111..101981622816561.9427114-CDS-L-elsbetiae_contig5385:10111..10198Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5385 10112..10198 -
1691683648.9229982-CDS-L-elsbetiae_contig5385:10111..101981691683648.9229982-CDS-L-elsbetiae_contig5385:10111..10198Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5385 10112..10198 -
1622816561.9527435-CDS-L-elsbetiae_contig5385:10711..108511622816561.9527435-CDS-L-elsbetiae_contig5385:10711..10851Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5385 10712..10851 -
1691683648.9310136-CDS-L-elsbetiae_contig5385:10711..108511691683648.9310136-CDS-L-elsbetiae_contig5385:10711..10851Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5385 10712..10851 -
1622816561.963896-CDS-L-elsbetiae_contig5385:11379..114791622816561.963896-CDS-L-elsbetiae_contig5385:11379..11479Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5385 11380..11479 -
1691683648.9394162-CDS-L-elsbetiae_contig5385:11379..114791691683648.9394162-CDS-L-elsbetiae_contig5385:11379..11479Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5385 11380..11479 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5385.13596.1prot_L-elsbetiae_contig5385.13596.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5385 7534..11479 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5385.13596.1

>prot_L-elsbetiae_contig5385.13596.1 ID=prot_L-elsbetiae_contig5385.13596.1|Name=mRNA_L-elsbetiae_contig5385.13596.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=301bp
QVAFGGQAEFGMSYCDKHVGGGDDLFWSYPYTDPPVLEPGLNLVFPNVNR
LEIPFLSITAKPTPDFSEYWIGGIEGPVVRIPADDRNTKQIFDVVDLSEL
PLFYLDFEEGLLDLAFDPMFSDNNFFYISHTINTGTKGDVHRYNRISRFT
HVPNNPADTLDTELVILTSAQKFNSIHSAGWLDFTPSAFRSPGNFNDLYW
TTGDGGPQTDPYGATQTLDNLLGSMIRISVPTFEGFESASGLPYNIPSGN
YEDVTGTSAAPEVCAVGFRNPFRCSFDSLNDNLWCGDIGQVDVESIYIIE
*
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mRNA from alignment at L-elsbetiae_contig5385:7534..11479-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5385.13596.1 ID=mRNA_L-elsbetiae_contig5385.13596.1|Name=mRNA_L-elsbetiae_contig5385.13596.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3946bp|location=Sequence derived from alignment at L-elsbetiae_contig5385:7534..11479- (Laminarionema elsbetiae ELsaHSoW15)
CAGGTCGCCTTCGGAGGACAGGCGGAGTTCGGCATGTCGTACTGTGACAA GCACGTGGGCGGCGGCGACGATCTGTTCTGGTCGTACCCGTACACCGATC GTGAGTACCCCCAGGAGTTGCCGACTTTCCTTCCCGTTTAGCGCCAACAG CGATTTTTGCTTTCGACACGGCCGACCGCGCTAGTAGTCGTGTTTGCACT TCCAAAAAAGTGGTCGTGAGCATCTTAGTTGTGTCCACCGCGTTGGCGAG CTTGAATATGGTGTATGCACATTCCCGGAAAGAAGAGAACCCCGCCTGTT ACCTCCTGAATTTGTCATGCTTAGGAACTGTTGGGGAGTGTTTACTTTGG CAACACTCTTGTTTTCAGCATTTTGCGATGCTAGCTTCTTCATAATGTGA TGCCTTCTTATGACGTGGACGCTTTGGCGGCTCCGCGCCGTCGTGGTCTT TCCTTGCCGAAACACCACCCGCGAAACGCCACCCGCGAGCATCTGTGGCA TTGAATGTTGCATGCAACAGTTGAGTTTGTTTTCTCGTGCATACGCCGAC CGCAACCTCCCTCCGCCGCCCCCCTCGTTTCCTCCTACTAATCAATGGTC TTGTGGCGGATATTTTGATGTGTTCCAGCCCCGGTGCTCGAGCCCGGCCT AAATCTGGTGTTCCCAAACGTTAATAGGCTCGAAATCCCATTCCTGTCCA TCACCGCAAAGCCGACCCCCGACTTCAGCGAGTACTGGATCGGCGGCATC GAGGGGCCAGTCGTTAGGGTGAGCGAAGCGGAGCAAGAGCCCCCACCCAT AGACGGGATCGACAGACTAAAAACTAAAACCAAGACGAGCCAAGACACAG ACACGCGTACGGGAGCTGCTTTTCAATCCTACATGTTTCTTCGAAACCGG AAATACTTGTCTCGGAGTCAAACTTGAAGCAGGCATGTAGTAAGCTGGCG AGTATAACGGCATGCAAACAAGTGTCCAGCTGATGCGGGCTCAGCACCCC CATGATTTGTGCTTGGCCGTGGGGGTGTACATACGGCATTTCGCACTCCA GGTCTCCGGTCGCATCGCCGCCCTTCTGACCCAGCCTTGCTGACTTTAGC GGTTGGCAGGGATGGGTTCAGATCGTCGTCGCGAGCCAGACGAGGAGTGA GATACAGTACTTGTTTTTTCTCCGGTGCCCGCTTTTTGCGGTTTCGCCCG ACCAGCACTCAAGAGCAGCAACAACAACAGACAGCTATACGCCAACCCAA ACCCCGCCCGCCCCACTCCAATCCGACACAGATTCCGGCGGATGATAGGA ACACGAAACAGATTTTCGACGTGGTTGACCTCTCCGAACTCCCGCTGTTC TACCTGGACTTCGAGGAGGTGAACAAAATAGCAGTTTCAGGGGGCCATGA CACCGTTCGGCAAAATTTCACGAGCTGGAGCATATGCAGTAATTAGTACC AAGGTGGTCAGCGCATAGCAACACAAACCGGGGCGGCGCAGTAGTCGCCC CTGCGGCTGCGCATCGTGGAAACCTTCGAAGGGTTGCGAAGGGACAGAGC AAGCGTTGCACCAACACGCACGTTTCTCGCGCGCTGGTGGCATCACTGAT TTTCTTAAATTAAGATCAACACTTTTGGCGTTTTGGCCGTTTTGCCTGGG TCGAAAGGAAACAACAAGAGTTTTCCCGGGTGCGTTCGATGCTGATTCGC ACCAACCAATGGCGACAACGCTCTGCCTGTTGTATGTAACCAACCAACGA CTACAACGCTCTGCCTGCTGTACGTACGTCAGGGTCTGCTCGACTTGGCG TTTGACCCCATGTTTTCGGACAACAACTTCTTCTACATCAGCCACACCAT CAACACCGGGACGAAGGTGAGTTCGACCTGTTGCATCACATCAGCGAATG TTTGCTGAACAGTAGCGAATGTTTTTTGTGGGCGGCTCAAGCGCTTTGGT TTCGTCACTGTGTAAAGATATGGTACATGGTATCATCTTTATTAGGTGCA CATCCATAAGTGTCGAGGCCGACCTCATCAAGGTCCATCAGGAGGAAAAT TCTGGACACGTAGGCCCCCCCGCGGGACCCAATTTTTCGATTTTTGTCTT ATGTAGGAATTAGTATAGGGGGACCCGTTCGGCGTTATTCAACTCCCATA CCCCCACCACGCCCACTGGAATCTGCGGGGCCCCGACTAGAAATCATATA GGCTACAGTATACCCCCTCCAGGGACTCGAATTTTCGATTTTGGGGCCTA CGTGTATCGAATTTTCCTCCTGATAGTTGATAGACCCTTGACCTCATGCT GAATACCTTGTTCCGCCAAAGCAGGAAACTCACGTACCCTCCCCGCTTGC AGCCGCTTCGCTCCAGAATATGAACGTTGCCGTCGCCGCAATTTTCGCTC TCTTTCTTTCTCTCGTAAGCTGTGCTGAACCCCTCTTACAGAGCACCCCC ACGCTCCCGCCCTCGCCCTTTTTCCTCGTTTCCAGGGGGACGTCCACCGA TACAACCGGATTTCGAGATTCACGCACGTCCCAAACAACCCGGCTGACAC TCTTGACACCGAGCTGGTGATTTTGACCAGTGCGCAGAAGTTCAACAGCA TCCATTCGGCCGGCTGGTTGGACTTTACGCCCTCGGCCTTCCGCTCACCC GTGAGAAAAACAGGCAGAAATCGCTACTGATGAAAAGTACACGAGATACA TGTTCTCTACAACGTGAGCATACAAATCAGAAAGTTCGTGGTTTCGGCAA GCTTTTTACTGAAAGCGCGATGAAAGCGAAGCGGTTCCAAGACGTGCGGA ATAGAGCGCCCACCGCCGTATTGGCCCATTCACTCATCAAACGTGCGCCC ATGGTCGTACATGTGATGCTGGGGATAATTTTTTAAGTTGCAACACGACT CCTGCCTTGACCGGGTCTCTTCTGCCCTCGTTGCACCCTCTCTCGTCGGG CTTCCAATATTCGCCTTAACAGGCCGTACGCGGTAAAAGTCTCAGACTTT GGACATATATCGATCCTGTCTTACTCCCCCCCCACCCCCCGTTATCGGCG TGCGTTCTCTTTTTTTCTCGAAAACAGGGCAATTTCAACGACCTGTACTG GACCACGGGGGACGGAGGACCCCAGACCGATCCCTACGGGGCCACCCAAA CCCTCGACAATCTCCTCGGGTCCATGATCAGAATCTCGGTGCCCACGTTC GAGGGCTTCGAGAGCGCTAGTGGTCTGCCGTACAACATTCCATCAGGGAA CTACGAAGGCATGTGTACAAACATATGCTTCTCACCCGTGGTGGTTTCTG AGAAGACAGAGCGGACAAAGAGGAACGGCCGTTCGACTTGAATATTCTGA TTGGAGTTAGACGCTGATGCTGCTGCTCTTTTTTCTCTTCTTGGCACAAG GATGTGTGAGGGGTGTTGGATGTGACAGGGGGATCAAGTACCACATCACC CTTGTGCGTCCGAGACGAGAATAACGAGCCCACAGCCAACCTACTGCGAA GGTTAGATTTCGTAACTTTGAGAGGACCGCGGAAGAAAGATTCGACTGTC GACTTGAATATGCCGATAGAAGGTGGACGCTGCTGCTTCTTTACTTTTAG CACTGCGAAGTGTAGTGACGCAGCGTGGGCATGCATACACCGGCGTAGTG CCACCCCCTTTCCGGTTCAATCCCTCATGTACCGATGACCCAGTCTGGGG GCAGAAAAACCTTTGTGATGTTCGGTGTCGATCGGTCAAAGTGGTGTCTC GTATGGTGTCGAAGGTTAATCACGTCGTGCTCGTCATCTGTTGCGCACAG ACGTGACCGGCACCAGCGCGGCTCCTGAGGTGTGCGCCGTCGGGTTCCGG AATCCGTTCCGTTGTTCGTTCGACAGCCTCAACGACAACCTCTGGTGCGG CGACATTGGCCAAGTCGACGTTGAGTCCATCTACATCATCGAGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5385:7534..11479-

>mRNA_L-elsbetiae_contig5385.13596.1 ID=mRNA_L-elsbetiae_contig5385.13596.1|Name=mRNA_L-elsbetiae_contig5385.13596.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1806bp|location=Sequence derived from alignment at L-elsbetiae_contig5385:7534..11479- (Laminarionema elsbetiae ELsaHSoW15)
CAGGTCGCCTTCGGAGGACAGGCGGAGTTCGGCATGTCGTACTGTGACAA
GCACGTGGGCGGCGGCGACGATCTGTTCTGGTCGTACCCGTACACCGATC
CAGGTCGCCTTCGGAGGACAGGCGGAGTTCGGCATGTCGTACTGTGACAA
GCACGTGGGCGGCGGCGACGATCTGTTCTGGTCGTACCCGTACACCGATC
CCCCGGTGCTCGAGCCCGGCCTAAATCTGGTGTTCCCAAACGTTAATAGG
CTCGAAATCCCATTCCTGTCCATCACCGCAAAGCCGACCCCCGACTTCAG
CGAGTACTGGATCGGCGGCATCGAGGGGCCAGTCGTTAGGCCCCGGTGCT
CGAGCCCGGCCTAAATCTGGTGTTCCCAAACGTTAATAGGCTCGAAATCC
CATTCCTGTCCATCACCGCAAAGCCGACCCCCGACTTCAGCGAGTACTGG
ATCGGCGGCATCGAGGGGCCAGTCGTTAGGATTCCGGCGGATGATAGGAA
CACGAAACAGATTTTCGACGTGGTTGACCTCTCCGAACTCCCGCTGTTCT
ACCTGGACTTCGAGGAGATTCCGGCGGATGATAGGAACACGAAACAGATT
TTCGACGTGGTTGACCTCTCCGAACTCCCGCTGTTCTACCTGGACTTCGA
GGAGGGTCTGCTCGACTTGGCGTTTGACCCCATGTTTTCGGACAACAACT
TCTTCTACATCAGCCACACCATCAACACCGGGACGAAGGGTCTGCTCGAC
TTGGCGTTTGACCCCATGTTTTCGGACAACAACTTCTTCTACATCAGCCA
CACCATCAACACCGGGACGAAGGGGGACGTCCACCGATACAACCGGATTT
CGAGATTCACGCACGTCCCAAACAACCCGGCTGACACTCTTGACACCGAG
CTGGTGATTTTGACCAGTGCGCAGAAGTTCAACAGCATCCATTCGGCCGG
CTGGTTGGACTTTACGCCCTCGGCCTTCCGCTCACCCGGGGACGTCCACC
GATACAACCGGATTTCGAGATTCACGCACGTCCCAAACAACCCGGCTGAC
ACTCTTGACACCGAGCTGGTGATTTTGACCAGTGCGCAGAAGTTCAACAG
CATCCATTCGGCCGGCTGGTTGGACTTTACGCCCTCGGCCTTCCGCTCAC
CCGGCAATTTCAACGACCTGTACTGGACCACGGGGGACGGAGGACCCCAG
ACCGATCCCTACGGGGCCACCCAAACCCTCGACAATCTCCTCGGGTCCAT
GATCAGAATCTCGGTGCCCACGTTCGAGGGCTTCGAGAGCGCTAGTGGTC
TGCCGTACAACATTCCATCAGGGAACTACGAAGGGCAATTTCAACGACCT
GTACTGGACCACGGGGGACGGAGGACCCCAGACCGATCCCTACGGGGCCA
CCCAAACCCTCGACAATCTCCTCGGGTCCATGATCAGAATCTCGGTGCCC
ACGTTCGAGGGCTTCGAGAGCGCTAGTGGTCTGCCGTACAACATTCCATC
AGGGAACTACGAAGACGTGACCGGCACCAGCGCGGCTCCTGAGGTGTGCG
CCGTCGGGTTCCGGAATCCGTTCCGTTGTTCGTTCGACAGCCTCAACGAC
AACCTCTGGTGCGGCGACATTGGCCAAGTCGACGTTGAGTCCATCTACAT
CATCGAGTGAACGTGACCGGCACCAGCGCGGCTCCTGAGGTGTGCGCCGT
CGGGTTCCGGAATCCGTTCCGTTGTTCGTTCGACAGCCTCAACGACAACC
TCTGGTGCGGCGACATTGGCCAAGTCGACGTTGAGTCCATCTACATCATC
GAGTGA
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