mRNA_L-elsbetiae_contig5376.13577.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5376.13577.1 vs. uniprot
Match: A0A8E6D6I5_9PHAE (Cytochrome c-550 n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D6I5_9PHAE) HSP 1 Score: 264 bits (674), Expect = 3.090e-88 Identity = 133/163 (81.60%), Postives = 145/163 (88.96%), Query Frame = 1 Query: 1 MLKKFFNSLVIILLCTFNLLSSTVYAIELDEATRTIVADKTGKTTILSSEQVKRGKRLFNSSCGQCHVGGVTKTNPNLGLDPEALSLATPNRDNIQGLVDYIKSPTTYDGLESIAEIHPSIKSADIFPRMRSLSEEDLVAIAGHILLQPKVISEKWGGGKIYY 489 M K+ L++ L + +LL S +AIELDEATRTI D TGKTTIL+ EQVKRGKRLFNSSCGQCHVGGVTKTNPNLGLDPEALSLATP RDNI GLVDY+K+PTTYDGLESIAEIHPSIKSADIFPRMRSLSE+DLVAIAGHILLQPK++SEKWGGGKIYY Sbjct: 7 MWKRITIRLLMACLLSSSLLVSAAFAIELDEATRTISVDSTGKTTILTPEQVKRGKRLFNSSCGQCHVGGVTKTNPNLGLDPEALSLATPARDNITGLVDYMKNPTTYDGLESIAEIHPSIKSADIFPRMRSLSEDDLVAIAGHILLQPKIVSEKWGGGKIYY 169
BLAST of mRNA_L-elsbetiae_contig5376.13577.1 vs. uniprot
Match: A0A7S6ZPA0_9STRA (Cytochrome c-550 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPA0_9STRA) HSP 1 Score: 259 bits (663), Expect = 1.190e-86 Identity = 129/163 (79.14%), Postives = 144/163 (88.34%), Query Frame = 1 Query: 1 MLKKFFNSLVIILLCTFNLLSSTVYAIELDEATRTIVADKTGKTTILSSEQVKRGKRLFNSSCGQCHVGGVTKTNPNLGLDPEALSLATPNRDNIQGLVDYIKSPTTYDGLESIAEIHPSIKSADIFPRMRSLSEEDLVAIAGHILLQPKVISEKWGGGKIYY 489 M KKFF+ + L N+L +A+ELDEATRTI D TGKTTILS+EQVKRGKRLFN SCGQCHVGG+TKTNPNLGLD EALSLATP+R++I GLVDY+K+PTTYDGLESIAEIHPSIKSADIFPRMRSLSEEDLV+IAGHILLQPKVI+EKWGGGKIY+ Sbjct: 1 MFKKFFSLFLASFLLFSNILGPVAFAVELDEATRTIPLDNTGKTTILSAEQVKRGKRLFNVSCGQCHVGGITKTNPNLGLDTEALSLATPSRNSITGLVDYMKNPTTYDGLESIAEIHPSIKSADIFPRMRSLSEEDLVSIAGHILLQPKVIAEKWGGGKIYF 163
BLAST of mRNA_L-elsbetiae_contig5376.13577.1 vs. uniprot
Match: A0A023HBF8_LITUN (Cytochrome c-550 n=3 Tax=Mediophyceae TaxID=589449 RepID=A0A023HBF8_LITUN) HSP 1 Score: 256 bits (655), Expect = 1.980e-85 Identity = 120/163 (73.62%), Postives = 145/163 (88.96%), Query Frame = 1 Query: 1 MLKKFFNSLVIILLCTFNLLSSTVYAIELDEATRTIVADKTGKTTILSSEQVKRGKRLFNSSCGQCHVGGVTKTNPNLGLDPEALSLATPNRDNIQGLVDYIKSPTTYDGLESIAEIHPSIKSADIFPRMRSLSEEDLVAIAGHILLQPKVISEKWGGGKIYY 489 M KKF ++L C FN+L ++ AI+LDEATRT+VAD +GKTT+LS EQVKRGKRLFN++CG CHVGG+TKTNPN+GLDPEALSLATP RDN+ LVDY+K+PT+YDGLESIAEIHPSIKSADI+PRMRSL+++DL AIAGHI+LQPK+++EKWGGGKIYY Sbjct: 1 MFKKFSKFWALVLFCIFNVLITSASAIDLDEATRTVVADSSGKTTVLSPEQVKRGKRLFNATCGACHVGGMTKTNPNVGLDPEALSLATPRRDNVASLVDYLKNPTSYDGLESIAEIHPSIKSADIYPRMRSLTDDDLSAIAGHIMLQPKIVTEKWGGGKIYY 163
BLAST of mRNA_L-elsbetiae_contig5376.13577.1 vs. uniprot
Match: A0A898CXN3_9STRA (Cytochrome c-550 n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A898CXN3_9STRA) HSP 1 Score: 254 bits (650), Expect = 1.140e-84 Identity = 117/163 (71.78%), Postives = 142/163 (87.12%), Query Frame = 1 Query: 1 MLKKFFNSLVIILLCTFNLLSSTVYAIELDEATRTIVADKTGKTTILSSEQVKRGKRLFNSSCGQCHVGGVTKTNPNLGLDPEALSLATPNRDNIQGLVDYIKSPTTYDGLESIAEIHPSIKSADIFPRMRSLSEEDLVAIAGHILLQPKVISEKWGGGKIYY 489 M KK+ +IL C FN+ +T AI+LDEATRT+V D TGKT +L+ EQVKRGKRLFN++CG CHVGG+TKTNPN+GLDPEALSLATP RDNI+ LVDY+K+PTTYDGL+S+AE+HPSIKSADI+PRMRSL++EDL AIAGHI+L P+++SEKWGGGKIYY Sbjct: 1 MFKKYSKICALILFCIFNIFVTTASAIDLDEATRTVVTDSTGKTVVLTPEQVKRGKRLFNATCGACHVGGITKTNPNVGLDPEALSLATPRRDNIEALVDYMKNPTTYDGLDSVAEVHPSIKSADIYPRMRSLTDEDLTAIAGHIMLSPRILSEKWGGGKIYY 163
BLAST of mRNA_L-elsbetiae_contig5376.13577.1 vs. uniprot
Match: A0A089VI76_CERBC (Cytochrome c-550 n=1 Tax=Cerataulina bicornis TaxID=1527800 RepID=A0A089VI76_CERBC) HSP 1 Score: 254 bits (649), Expect = 1.620e-84 Identity = 119/163 (73.01%), Postives = 141/163 (86.50%), Query Frame = 1 Query: 1 MLKKFFNSLVIILLCTFNLLSSTVYAIELDEATRTIVADKTGKTTILSSEQVKRGKRLFNSSCGQCHVGGVTKTNPNLGLDPEALSLATPNRDNIQGLVDYIKSPTTYDGLESIAEIHPSIKSADIFPRMRSLSEEDLVAIAGHILLQPKVISEKWGGGKIYY 489 M KK+ ++L C FN+ +T AI+LD+ATRT+V D GKTTILS EQVKRGKRLFN++CG CHVGG+TKTNPN+GLDPEALSLATP RDNI LVD++K+PTTYDGLESIAEIHPSIKSADI+PRMRSL++EDL AIAGHI+L P+++SEKWGGGKIYY Sbjct: 1 MFKKYSKFCALVLFCIFNIFVTTASAIDLDDATRTVVVDSAGKTTILSPEQVKRGKRLFNATCGACHVGGITKTNPNVGLDPEALSLATPRRDNINALVDFMKNPTTYDGLESIAEIHPSIKSADIYPRMRSLTDEDLTAIAGHIMLSPRILSEKWGGGKIYY 163
BLAST of mRNA_L-elsbetiae_contig5376.13577.1 vs. uniprot
Match: D1J771_ECTSI (Cytochrome c-550 n=6 Tax=Ectocarpales TaxID=2877 RepID=D1J771_ECTSI) HSP 1 Score: 253 bits (646), Expect = 4.340e-84 Identity = 129/163 (79.14%), Postives = 143/163 (87.73%), Query Frame = 1 Query: 1 MLKKFFNSLVIILLCTFNLLSSTVYAIELDEATRTIVADKTGKTTILSSEQVKRGKRLFNSSCGQCHVGGVTKTNPNLGLDPEALSLATPNRDNIQGLVDYIKSPTTYDGLESIAEIHPSIKSADIFPRMRSLSEEDLVAIAGHILLQPKVISEKWGGGKIYY 489 M KKFF SL+I+ L NL +S+V AIELDEATRTI A GKT +L+ EQVKRGKRLFNSSCGQCHVGG+TKTNPNLGLD EALSLATP+R+NI GLVDY+K+PTTYDGLESIAEIHPSIKSA+IF RMRSL E DLV IAGHILLQPK++SEKWGGGKIYY Sbjct: 1 MFKKFFTSLIIVSL--LNLGTSSVLAIELDEATRTIPATSDGKTIVLTPEQVKRGKRLFNSSCGQCHVGGITKTNPNLGLDTEALSLATPSRNNITGLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRMRSLDENDLVDIAGHILLQPKILSEKWGGGKIYY 161
BLAST of mRNA_L-elsbetiae_contig5376.13577.1 vs. uniprot
Match: A0A2U9NP77_9STRA (Cytochrome c-550 n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A2U9NP77_9STRA) HSP 1 Score: 253 bits (646), Expect = 4.650e-84 Identity = 117/163 (71.78%), Postives = 142/163 (87.12%), Query Frame = 1 Query: 1 MLKKFFNSLVIILLCTFNLLSSTVYAIELDEATRTIVADKTGKTTILSSEQVKRGKRLFNSSCGQCHVGGVTKTNPNLGLDPEALSLATPNRDNIQGLVDYIKSPTTYDGLESIAEIHPSIKSADIFPRMRSLSEEDLVAIAGHILLQPKVISEKWGGGKIYY 489 M K + ++L C FN+L ++ AI+LDEATRT+VAD TGKTT+L+ EQVKRGKRLFN++CG CH GGVTKTNPN+GLDPE LSLATP RDNI LVDY+K+PT+YDGLESIAEIHPSIKSADI+PRMRSL++EDL +IAGH++LQPK+++EKWGGGKIYY Sbjct: 1 MFKTYSKFYAVVLFCVFNVLVTSASAIDLDEATRTVVADSTGKTTVLTPEQVKRGKRLFNATCGACHTGGVTKTNPNVGLDPEGLSLATPRRDNIAALVDYLKNPTSYDGLESIAEIHPSIKSADIYPRMRSLTDEDLYSIAGHVMLQPKIVTEKWGGGKIYY 163
BLAST of mRNA_L-elsbetiae_contig5376.13577.1 vs. uniprot
Match: H2EV45_9STRA (Cytochrome c-550 n=1 Tax=Ulnaria acus TaxID=1436140 RepID=H2EV45_9STRA) HSP 1 Score: 253 bits (645), Expect = 6.600e-84 Identity = 121/163 (74.23%), Postives = 139/163 (85.28%), Query Frame = 1 Query: 1 MLKKFFNSLVIILLCTFNLLSSTVYAIELDEATRTIVADKTGKTTILSSEQVKRGKRLFNSSCGQCHVGGVTKTNPNLGLDPEALSLATPNRDNIQGLVDYIKSPTTYDGLESIAEIHPSIKSADIFPRMRSLSEEDLVAIAGHILLQPKVISEKWGGGKIYY 489 MLKK I+ C FNL AI+LDEATRT+VAD +G TT+LS EQVKRGKRLFN++CG CHVGGVTKTNPN+GLDPEALSLATP RDNI +VDY+K+PTTYDGLESIAE+HPSIKSADI+PRMRSL++EDL IAGHI+LQPK++SEKWGGGKIYY Sbjct: 1 MLKKSSQFFGILFFCIFNLFVLNASAIDLDEATRTVVADSSGNTTVLSPEQVKRGKRLFNATCGACHVGGVTKTNPNVGLDPEALSLATPRRDNIASIVDYLKNPTTYDGLESIAEVHPSIKSADIYPRMRSLTDEDLYTIAGHIMLQPKIVSEKWGGGKIYY 163
BLAST of mRNA_L-elsbetiae_contig5376.13577.1 vs. uniprot
Match: A0A0K2RW17_9STRA (Cytochrome c-550 n=1 Tax=Triparma laevis TaxID=1534972 RepID=A0A0K2RW17_9STRA) HSP 1 Score: 252 bits (643), Expect = 1.330e-83 Identity = 116/163 (71.17%), Postives = 144/163 (88.34%), Query Frame = 1 Query: 1 MLKKFFNSLVIILLCTFNLLSSTVYAIELDEATRTIVADKTGKTTILSSEQVKRGKRLFNSSCGQCHVGGVTKTNPNLGLDPEALSLATPNRDNIQGLVDYIKSPTTYDGLESIAEIHPSIKSADIFPRMRSLSEEDLVAIAGHILLQPKVISEKWGGGKIYY 489 M KK+ SL++ + C FNL++S+ AI+LDEATRT+ D +GKTT+L++EQVKRGKRLFN++CG CHVGG+TKTNPN+GLDPE LSLATP RDNI LVDY+K PT+YDGLESIAEIHPS+KSADI+PRMRSL++EDL +I GHI+LQPK+++EKWGGGKIYY Sbjct: 1 MFKKYSLSLLLSVFCLFNLINSSALAIDLDEATRTVAVDGSGKTTVLTAEQVKRGKRLFNATCGACHVGGITKTNPNVGLDPEGLSLATPRRDNILALVDYMKDPTSYDGLESIAEIHPSVKSADIYPRMRSLTDEDLYSIGGHIMLQPKIVTEKWGGGKIYY 163
BLAST of mRNA_L-elsbetiae_contig5376.13577.1 vs. uniprot
Match: A0A023HA47_9STRA (Cytochrome c-550 n=1 Tax=Coscinodiscus radiatus TaxID=33642 RepID=A0A023HA47_9STRA) HSP 1 Score: 251 bits (642), Expect = 1.890e-83 Identity = 120/163 (73.62%), Postives = 140/163 (85.89%), Query Frame = 1 Query: 1 MLKKFFNSLVIILLCTFNLLSSTVYAIELDEATRTIVADKTGKTTILSSEQVKRGKRLFNSSCGQCHVGGVTKTNPNLGLDPEALSLATPNRDNIQGLVDYIKSPTTYDGLESIAEIHPSIKSADIFPRMRSLSEEDLVAIAGHILLQPKVISEKWGGGKIYY 489 MLKK+ I LL FN + AI+LDEATRT++AD TG T IL+ EQVKRGKRLFN++CG CHVGGVTKTNPN+GLDPEALSLATP RDNI GLVDY+K+PTTYDGLESIA++HPSIKSADI+PRMRSL+ EDL AIAGH++LQPK+++EKWGGGKIYY Sbjct: 1 MLKKYSIVYSIFLLSIFNFFVTNALAIDLDEATRTVIADSTGNTVILTPEQVKRGKRLFNATCGACHVGGVTKTNPNVGLDPEALSLATPRRDNIAGLVDYLKNPTTYDGLESIADVHPSIKSADIYPRMRSLTNEDLYAIAGHVMLQPKIVTEKWGGGKIYY 163 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5376.13577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5376.13577.1 >prot_L-elsbetiae_contig5376.13577.1 ID=prot_L-elsbetiae_contig5376.13577.1|Name=mRNA_L-elsbetiae_contig5376.13577.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=164bp MLKKFFNSLVIILLCTFNLLSSTVYAIELDEATRTIVADKTGKTTILSSEback to top mRNA from alignment at L-elsbetiae_contig5376:2516..3007- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5376.13577.1 ID=mRNA_L-elsbetiae_contig5376.13577.1|Name=mRNA_L-elsbetiae_contig5376.13577.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=492bp|location=Sequence derived from alignment at L-elsbetiae_contig5376:2516..3007- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5376:2516..3007- >mRNA_L-elsbetiae_contig5376.13577.1 ID=mRNA_L-elsbetiae_contig5376.13577.1|Name=mRNA_L-elsbetiae_contig5376.13577.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=984bp|location=Sequence derived from alignment at L-elsbetiae_contig5376:2516..3007- (Laminarionema elsbetiae ELsaHSoW15)back to top |