mRNA_L-elsbetiae_contig536.13550.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig536.13550.1 vs. uniprot
Match: D7G8M8_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M8_ECTSI) HSP 1 Score: 192 bits (488), Expect = 8.000e-54 Identity = 116/178 (65.17%), Postives = 128/178 (71.91%), Query Frame = 1 Query: 1 SRSLSPLGGWSIINRP----SSSSPLGPGHRSAAGGRRRFFGLSEAAEAEAXXXXXXXXXXXXKAGAPARDEGVVA--AVAEQSGSGVGTGNPVMDAHRFLLSLRSDPMRAMLRSGMKETFASVCLVKDIRPPVFSALLTYIYTDTLQLQRPEDITELLVVANQYTLTDLLSLCEGFL 516 SRS+SP W++I P S SPLG GHRSAAGG+RRFFGLSE AEAEA + R G VA A A +G G G + + DAHR LLSLRSDPMRAMLRSGM+E+F LVKDIRP VF+ALLTY+YTDTLQLQRPEDITELLVVANQYTLTDLLSLCEGFL Sbjct: 17 SRSVSPKNRWAVITPPLAPSCSLSPLGSGHRSAAGGKRRFFGLSETAEAEAEAAAVKAELEGGR-----RRGGAVADKAPAPPAGEGGGAKDSI-DAHRALLSLRSDPMRAMLRSGMRESFTMDVLVKDIRPAVFTALLTYLYTDTLQLQRPEDITELLVVANQYTLTDLLSLCEGFL 188
BLAST of mRNA_L-elsbetiae_contig536.13550.1 vs. uniprot
Match: L8GLW0_ACACA (BTB/POZ domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GLW0_ACACA) HSP 1 Score: 78.2 bits (191), Expect = 1.790e-11 Identity = 42/126 (33.33%), Postives = 76/126 (60.32%), Query Frame = 1 Query: 262 VMDAHRFLLSLRSDPMRAMLRSGMKETFASVCLVKDIRPPVFSALLTYIYTDTLQLQRPEDITELLVVANQYTLTDLLSLCEGFLQGVLDEENASHLYHYADSLAMPTFEHRCLTFILRNWRNVVR 639 ++ AH+ +L RS+ RAM SGM+E+ A V V DI P F+ALL Y+Y+ +++ +++ ELL+++NQYTLT L CE +++ + ++NA+++ A + ++L+ +V+R Sbjct: 728 LIPAHKAILCGRSEHFRAMFTSGMRESQAEVIDVHDITLPAFNALLNYLYSGVVEITE-DNVVELLMISNQYTLTHLQEQCECYVEKGIYKDNAAYILEMAHRYQTHHLRTIAMNYMLQQRDHVMR 852
BLAST of mRNA_L-elsbetiae_contig536.13550.1 vs. uniprot
Match: I1J210_BRADI (Uncharacterized protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1J210_BRADI) HSP 1 Score: 73.6 bits (179), Expect = 1.580e-10 Identity = 44/127 (34.65%), Postives = 65/127 (51.18%), Query Frame = 1 Query: 253 GNPVMDAHRFLLSLRSDPMRAMLRSGMKETFASVCLVKDIRPPVFSALLTYIYTDTL------QLQRPEDITELLVVANQYTLTDLLSLCEGFLQGVLDEENASHLYHYADSLAMPTFEHRCLTFIL 615 G + AHRFLL+ RS +A L MKE A + + DI PP+F ALL ++YTD++ + R E + LLV A++Y L L LCE L +D + + A+ + CL F++ Sbjct: 204 GGQLFSAHRFLLAARSPVFKAELFGPMKEKSAQLIKIDDIEPPIFEALLHFVYTDSMPDDEHCKEGRTEKLQHLLVAADRYGLDRLKVLCESELSKSIDAKTVATTLVLAEQHHCKVLKEACLEFMV 330
BLAST of mRNA_L-elsbetiae_contig536.13550.1 vs. uniprot
Match: L8GK04_ACACA (BTB/POZ domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GK04_ACACA) HSP 1 Score: 73.2 bits (178), Expect = 1.880e-10 Identity = 42/119 (35.29%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 274 HRFLLSLRSDPMRAMLRSGMKETFASVCLVKDIRPPVFSALLTYIYTDTLQLQR--PEDITELLVVANQYTLTDLLSLCEGFLQGVLDEENASHLYHYADSLAMPTFEHRCLTFILRNW 624 H+ +++ R +AM SGM+E+ A + D+ P+F L ++YTD + + P+D+ ELL VANQYTL L C+ LQ +D EN L+ A C+ FILR++ Sbjct: 188 HKVVITSRCPQFQAMFLSGMRESTAEK-IPLDLHYPIFLMFLEFLYTDDVDFAKVSPDDVIELLGVANQYTLDQLTDRCDRELQKFIDFENVVVLFQAASLYHAERLRSSCVKFILRSY 305
BLAST of mRNA_L-elsbetiae_contig536.13550.1 vs. uniprot
Match: A0A3B6LVH8_WHEAT (Uncharacterized protein n=3 Tax=Triticum TaxID=4564 RepID=A0A3B6LVH8_WHEAT) HSP 1 Score: 71.2 bits (173), Expect = 8.820e-10 Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 253 GNPVMDAHRFLLSLRSDPMRAMLRSGMKETFASVCL-VKDIRPPVFSALLTYIYTDTL---QLQRPEDITE----LLVVANQYTLTDLLSLCEGFLQGVLDEENASHLYHYADSLAMPTFEHRCLTFILRNWRNVV 636 G ++AHRF+L++RS ++A L M+E C+ +KD++P VF ALL +IYTD+L + + +D TE LLV A++Y + L +C+ L L+ E S AD + CL FI + NV+ Sbjct: 195 GGETIEAHRFVLAMRSPVLKAELYGPMREARPGQCITIKDMQPAVFRALLHFIYTDSLPGREDREGDDDTEMARLLLVAADRYAMERLKMICQSILCENLNAETVSTTLALADQHNCVKLKDACLEFIKISNDNVM 330
BLAST of mRNA_L-elsbetiae_contig536.13550.1 vs. uniprot
Match: A0A7S1GCI2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCI2_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 9.430e-10 Identity = 42/120 (35.00%), Postives = 64/120 (53.33%), Query Frame = 1 Query: 274 HRFLLSLRSDPMRAMLRSGMKETFASVCLVKDIRPPVFSALLTYIYTDTLQLQRPEDITELLVVANQYTLTDLLSLCEGFLQGVLDEENASHLYHYADSLAMPTFEHRCLTFILRNWRNV 633 HR +LS RS+ +M SGM E+ A+ + D+ VFSA++ ++YTDTL + LL A + L L LC+ L+ LD NA+ L +AD CLT++L ++ +V Sbjct: 368 HRAILSARSEYFSSMFASGMAESSAATIHLHDVAYEVFSAVVRFLYTDTLPPSAEALVLPLLKEAQKMNLVRLSRLCQRALEARLDRTNAAALLEHADRHGALPLRDACLTYMLTHFASV 487
BLAST of mRNA_L-elsbetiae_contig536.13550.1 vs. uniprot
Match: A0A5J9V6S7_9POAL (Uncharacterized protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9V6S7_9POAL) HSP 1 Score: 71.2 bits (173), Expect = 9.480e-10 Identity = 44/125 (35.20%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 253 GNPVMDAHRFLLSLRSDPMRAMLRSGMKETFAS-VCLVKDIRPPVFSALLTYIYTDTLQLQRPED----ITELLVVANQYTLTDLLSLCEGFLQGVLDEENASHLYHYADSLAMPTFEHRCLTFI 612 G AHR +L+ RS +A L MKE+ A+ V + D+ VFSALLTY+YTDTL + E+ + +LV A++Y L L +CE L +D +A+ + A+ P + C+ F+ Sbjct: 217 GRKTFSAHRLVLAARSPVFKAELYGPMKESNATKVIRIDDMEADVFSALLTYMYTDTLPQMKEEEESAMVQHVLVAADRYNLARLKLICEDKLCKHIDTASAASILALAEQHNCPGLKEACMEFL 341
BLAST of mRNA_L-elsbetiae_contig536.13550.1 vs. uniprot
Match: A0A7S1DVH5_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DVH5_HEMAN) HSP 1 Score: 68.6 bits (166), Expect = 1.340e-9 Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = 1 Query: 271 AHRFLLSLRSDPMRAMLRSGMKETFASVCLVKDIRPPVFSALLTYIYTDTLQLQRPEDITELLVVANQYTLTDLLSLCEGFLQGVLDEENASHLYHYADSLAMPTFEHRCLTFILRNWRNVV 636 AHR +L R + RAM SGM E+ ++ V D VFSA+L Y+YT T+++ ED EL+ +A +Y L L +L E + + N S + AD + + CL +I++ + V+ Sbjct: 62 AHRAVLGARCEYFRAMFESGMVESRSNEIEVSDASHGVFSAMLLYVYTGTVEVA-DEDAVELMYIAAKYDLAPLKALTERHITRKITAANVSAIILAADVHSASELKRTCLDYIVKEFGRVI 182
BLAST of mRNA_L-elsbetiae_contig536.13550.1 vs. uniprot
Match: A0A151ZK46_9MYCE (BTB domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZK46_9MYCE) HSP 1 Score: 70.5 bits (171), Expect = 1.770e-9 Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 1 Query: 256 NPVMDAHRFLLSLRSDPMRAMLRSGMKETFASVCLVKDIRPPVFSALLTYIYTDTLQLQRPEDITELLVVANQYTLTDLLSLCEGFLQGVLDEENASHLYHYADSLAMPTFEHRCLTFILRNWRNVV 636 N + AH+ +LS R + M S M E+ +KD + PVF ++ Y+YTD+L E I +L+++A++Y L L SLCE L +++ N S ++ +D L IL N R +V Sbjct: 213 NSSIFAHKNILSSRCAKFKGMFSSEMVESTKKEIEIKDHKAPVFRKMIEYLYTDSLNEDNIEMILQLIIIADEYILDSLKSLCESKLILEINQNNVSSIFIQSDIYNCKNLRKASLDHILSNIRKLV 339
BLAST of mRNA_L-elsbetiae_contig536.13550.1 vs. uniprot
Match: A0A061RTH9_9CHLO (Speckle-type POZ protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RTH9_9CHLO) HSP 1 Score: 70.9 bits (172), Expect = 2.350e-9 Identity = 47/127 (37.01%), Postives = 62/127 (48.82%), Query Frame = 1 Query: 262 VMDAHRFLLSLRSDPMRAMLRSGMKETFASVCLVKDIRPPVFSALLTYIYTDTLQLQRPED----------ITELLVVANQYTLTDLLSLCEGFLQGVLDEENASHLYHYADSLAMPTFEHRCLTFI 612 V AHR +L RS RA+L GMKE V D+RPPVF ALL ++Y D L PE+ LLV A+Q+ LT L ++CE L +DE + + A+ + CL FI Sbjct: 375 VFRAHRIILGTRSPVFRALLSGGMKEDEEGEVNVVDVRPPVFKALLYFVYADAL----PEEHEGPNLDVHMAQHLLVAADQFALTRLRAICEQRLCETVDEGSVATTLTLAEQNHASELKRVCLEFI 497 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig536.13550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig536.13550.1 >prot_L-elsbetiae_contig536.13550.1 ID=prot_L-elsbetiae_contig536.13550.1|Name=mRNA_L-elsbetiae_contig536.13550.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp MDAHRFLLSLRSDPMRAMLRSGMKETFASVCLVKDIRPPVFSALLTYIYTback to top mRNA from alignment at L-elsbetiae_contig536:31975..35075+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig536.13550.1 ID=mRNA_L-elsbetiae_contig536.13550.1|Name=mRNA_L-elsbetiae_contig536.13550.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3101bp|location=Sequence derived from alignment at L-elsbetiae_contig536:31975..35075+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig536:31975..35075+ >mRNA_L-elsbetiae_contig536.13550.1 ID=mRNA_L-elsbetiae_contig536.13550.1|Name=mRNA_L-elsbetiae_contig536.13550.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=756bp|location=Sequence derived from alignment at L-elsbetiae_contig536:31975..35075+ (Laminarionema elsbetiae ELsaHSoW15)back to top |