mRNA_L-elsbetiae_contig5355.13538.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5355.13538.1
Unique NamemRNA_L-elsbetiae_contig5355.13538.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: D8LDE8_ECTSI (RNA pseudouridylate synthase domain-containing protein (C-terminal) RNA pseudouridylate synthase dom n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE8_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 5.630e-49
Identity = 109/197 (55.33%), Postives = 122/197 (61.93%), Query Frame = 1 
Query:  163 SRREAERLVEAGVVTVNGTPVQTSALNVGPQDVVKV------------------KGRALERLGHHTPKLWMVHKIRNELVTRHEPEGRATVFNRLAKLEMPDTLMPL-----------------------------------------ITEEELSGMRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 576
            SRREAER+VEAGVV VNG  VQT ALNVGP+D+VKV                  +G+ LER   HTPKLWMVHK+RNELVTRH+PEGR TVF+RL KL++PDTLMP+                                         ITEE+L  MRSGCTIDGVRYKGMFVRV  GGGKG  GRNAWLTI+CTEG
Sbjct:  126 SRREAERMVEAGVVMVNGATVQTPALNVGPRDIVKVNVGLFQQPGNGTDCFTFVQGKVLERPESHTPKLWMVHKMRNELVTRHDPEGRPTVFDRLTKLKLPDTLMPVGRLDYNTEGLLLLTNDGDLARKMELPSSNIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEG 322
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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A6H5JGT0_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGT0_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 2.180e-35
Identity = 91/282 (32.27%), Postives = 150/282 (53.19%), Query Frame = -2 
Query: 4963 GEEPVLSKKKTTNWAPAMKILGYRVDTEDLTLGLPVRKVEAIRALLR-RWPQGRKEATVEEMLSLAGKLHHAAFVIQPARYYVRRLLQLTNLHLSGSEKAGSGEAWGMHRKLKEKKRKLKLTPEFMADLGWWRLFLGREGCRVGDMITSPAFTFVEQKPVRLLFADASLRALGGSCGVKRVYWRWNLPDEIVQRTVACNPKMEGDRIPINV*EVVAAVINVHGMIRRTRDRPEREGDAVLIRADNASTVSRVMKCRGRKGKEFAGE*VGALMRILGPTSVSG 5805
            GE P+L+ KK++NW   ++ LG+ +D+  L + L  +K EA++  L   WP+ ++EAT +E+ S+AGKL +  +V++  +Y+V RLL+LT LH   +                     ++L  EF  DL ++R  +  E    G+ + +P +  V+++P RL  +DAS  A+GG C  KRV+WR++LP +          + E   + IN+ E+V  V+    M     DRP+   D VL+R DN + V+   +C G + K         +MR+LG   +SG
Sbjct: 1218 GETPILAPKKSSNWDTQLEYLGFVIDSHKLKISLTTKKAEALKTALEIDWPRHKREATAQEVFSIAGKLWNLTYVVRAGKYFVWRLLRLTGLHRKHTRNCS---------------HVVELGREFHDDLDFFRWAIEHELLTAGESLNAPCYGVVKRQPKRLYLSDASFDAIGGFCPEKRVFWRYDLPLDFATELKQKAARRETCSVTINLLELVGMVMTAWVMHSLVGDRPKNNNDPVLMRGDNMAAVTWSNRCGGARDKRAC-----LMMRMLGRLEISG 1479
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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A6H5JHQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ2_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 7.080e-35
Identity = 75/151 (49.67%), Postives = 101/151 (66.89%), Query Frame = -2 
Query: 4981 MADLGWWRLFLGREGCRVGDMITSPAFTFVEQKPVRLLFADASLRALGGSCGVKRVYWRWNLPDEIVQRTVACNPKMEGDRIPINV*EVVAAVINVHGMIRRTRDRPEREGDAVLIRADNASTVSRVMKCRGRKGKEFAGE*VGALMRILG 5433
            MA++GWWR +LG     VG  IT+ +F+F +Q P R  F+DAS RALGG C   RV+WR+ LP+E+  RT+    K EGD I IN  E++A V+  + M+    DRPEREG+AV++RADN + VS V KC G  GK+ A   +GALMR++G
Sbjct:    1 MAEVGWWRWYLGGGAGEVGRKITAASFSFAKQVPSRSWFSDASTRALGGVCMETRVFWRYELPEEVQGRTIRARQKGEGDFICINELELMAMVMTTYVMVISRGDRPEREGEAVIMRADNQNAVSWVKKCGGA-GKKKAR--IGALMRVIG 148
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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A6H5J9J6_9PHAE (S4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9J6_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 1.690e-26
Identity = 68/125 (54.40%), Postives = 78/125 (62.40%), Query Frame = 1 
Query:  163 SRREAERLVEAGVVTVNGTPVQTSALNVGPQDVVKVK------------------------------------GRALERLGHHTPKLWMVHKIRNELVTRHEPEGRATVFNRLAKLEMPDTLMPL 429
            SRREAER+VEAGVV VNG  VQT ALNVGP+D+VKV                                     G+ LER   HTPKLWMVHK+RNELVTR +PEGR TVF+RLAKL++PDTLMP+
Sbjct:  126 SRREAERMVEAGVVMVNGATVQTPALNVGPRDIVKVNVGLFLQLGNGADYRFFVQVDFDALLLCLSYLSDTALGKVLERPESHTPKLWMVHKMRNELVTRDDPEGRPTVFDRLAKLKLPDTLMPV 250
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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A1X6Z3Y8_9RHOB (Pseudouridine synthase n=3 Tax=Roseovarius TaxID=74030 RepID=A0A1X6Z3Y8_9RHOB)

HSP 1 Score: 87.4 bits (215), Expect = 8.230e-15
Identity = 61/177 (34.46%), Postives = 82/177 (46.33%), Query Frame = 1 
Query:  163 SRREAERLVEAGVVTVNGTPVQTSALNVGPQDVVKVKGRALERLGHHTPKLWMVHKIRNELVTRHEPEGRATVFNRLA------------------------------KLEMPDT---------LMPLITEEELSGMRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 576
            SRREAERL+EAG VTVNG  +  +ALNV P D V V GRALE       +LW+ HK    + T  + +GRAT+++ L                               KLE+P T         +    T+     +R G T+DG R++GM V +         G NAW+T+   EG
Sbjct:   22 SRREAERLIEAGRVTVNGVKITRAALNVTPADKVVVDGRALE--APEPARLWLYHKPTGLVTTNRDEQGRATIYDDLPADLPRVMSVGRLDLNSEGLLLLTNDGGLKRKLELPSTGWLRRYRVRVNGRPTDATFEPLRKGLTVDGERFQGMMVSLDR-----QQGANAWITVSIREG 191
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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A6H5L2H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H9_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 3.210e-14
Identity = 47/103 (45.63%), Postives = 66/103 (64.08%), Query Frame = -2 
Query: 4963 RVYWRWNLPDEIVQRTVACNPKMEGDRIPINV*EVVAAVINVHGMIRRTRDRPEREGDAVLIRADNASTVSRVMKCRGRKGKEFAGE*VGALMRILGPTSVSG 5271
            R +WR+ LP+E+  RT+    K EGD I INV E++  V+  + M+    D+PEREG+AV++RADN S VS V K  G +GK+ A   +GALMR++G     G
Sbjct:    4 RGFWRYELPEEVQGRTIRARQKGEGDFICINVLELMTMVMTAYVMVISRGDKPEREGEAVMMRADNESAVSWVKKW-GWEGKKKAR--IGALMRMMGALKTIG 103
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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A3M2E3L3_9PROT (Pseudouridine synthase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M2E3L3_9PROT)

HSP 1 Score: 83.6 bits (205), Expect = 1.990e-13
Identity = 60/177 (33.90%), Postives = 83/177 (46.89%), Query Frame = 1 
Query:  163 SRREAERLVEAGVVTVNGTPVQTSALNVGPQDVVKVKGRALERLGHHTPKLWMVHKIRNELVTRHEPEGRATVFNRLA------------------------------KLEMPDT---------LMPLITEEELSGMRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 576
            SRREAERL+EAG V+VNGT + + ALNVGP D ++V GR +       P+LW ++K    + T  + +GR T+F+ L                               +LE+P T         +    T+E L  +R G  IDG R+K M V +         G NAWLT+   EG
Sbjct:   35 SRREAERLIEAGRVSVNGTVITSPALNVGPDDRIEVDGRPIA--APEPPRLWRLYKPTGIVTTARDEKGRKTIFDILPPDMPRVMPVGRLDINSEGLLLLTNDGEIKRRLELPSTGWVRKYRVRVKGRPTDEMLEPLRKGLEIDGERFKPMDVTIDR-----QQGANAWLTVGIREG 204
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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A058ZIG0_9RHOB (Pseudouridine synthase n=1 Tax=Actibacterium atlanticum TaxID=1461693 RepID=A0A058ZIG0_9RHOB)

HSP 1 Score: 82.8 bits (203), Expect = 2.780e-13
Identity = 60/177 (33.90%), Postives = 83/177 (46.89%), Query Frame = 1 
Query:  163 SRREAERLVEAGVVTVNGTPVQTSALNVGPQDVVKVKGRALERLGHHTPKLWMVHKIRNELVTRHEPEGRATVFNRLA------------------------------KLEMPDT---------LMPLITEEELSGMRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 576
            SRREAER++EAG VTVN   + + ALNV  QD + V G+AL       P+LW+ HK    + T  + +GR TVF+ L                               KLE+P T         +    +E+ L+ +R G TIDG R++GM + +         G NAWLT+   EG
Sbjct:   22 SRREAERMIEAGRVTVNSERIFSPALNVTAQDKIVVDGQALAEA--EPPRLWLYHKPAGLVTTARDEKGRETVFDALPEGMPRVMSVGRLDLNSEGLLLLTNDGEMKRKLELPSTGWLRKYRVRVRGYPSEDTLAPLRKGVTIDGERFQGMQISLDR-----QQGANAWLTVGLREG 191
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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A0A350AJK0_9RHOB (Pseudouridine synthase (Fragment) n=2 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A350AJK0_9RHOB)

HSP 1 Score: 84.3 bits (207), Expect = 4.590e-13
Identity = 61/177 (34.46%), Postives = 82/177 (46.33%), Query Frame = 1 
Query:  163 SRREAERLVEAGVVTVNGTPVQTSALNVGPQDVVKVKGRALERLGHHTPKLWMVHKIRNELVTRHEPEGRATVFNRLA------------------------------KLEMPDT---------LMPLITEEELSGMRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 576
            SRR+AE+LVE G VTVNG PV + A NVGP+D V V GR L+       +LW+ HK    + T  + EGRAT+F++L                               +LE+P T         +    T+E  + +R G T DG  ++ M V +         G NAWLTI   EG
Sbjct:   22 SRRDAEKLVEEGAVTVNGKPVTSPATNVGPKDRVAVNGRVLDP--PEPTRLWLYHKPTGLVTTAKDEEGRATIFDKLPADMPRVMSIGRLDINSEGLLLLTNDGDLKRRLELPSTGWLRKYRVRINGRPTDETFAPLREGITTDGETFQPMSVSLDR-----QQGANAWLTIGLREG 191
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BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match: A3VHQ4_9RHOB (Pseudouridine synthase n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A3VHQ4_9RHOB)

HSP 1 Score: 82.4 bits (202), Expect = 6.140e-13
Identity = 59/177 (33.33%), Postives = 82/177 (46.33%), Query Frame = 1 
Query:  163 SRREAERLVEAGVVTVNGTPVQTSALNVGPQDVVKVKGRALERLGHHTPKLWMVHKIRNELVTRHEPEGRATVFNRLA------------------------------KLEMPDT---------LMPLITEEELSGMRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 576
            SRREAER++EAG V+VNG  + + ALNV P+D + V G  +E+     P+LW+ HK    + T  + +GR TVF++L                               KLE+P T         +     E  L  +R G T+DG  ++GM V +         G NAWLTI   EG
Sbjct:   49 SRREAERMIEAGRVSVNGKVIDSPALNVTPRDKITVDGTLVEK--PEAPRLWLYHKPTGLVTTERDEKGRETVFDKLPEDMPRVMSVGRLDLNSEGLLLLTNDGGIKRKLELPSTGWVRKYRVRVNGKPEEAVLEKLRKGITVDGEAFQGMSVTLDR-----QQGANAWLTIGLREG 218
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDE8_ECTSI5.630e-4955.33RNA pseudouridylate synthase domain-containing pro... [more]
A0A6H5JGT0_9PHAE2.180e-3532.27Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHQ2_9PHAE7.080e-3549.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9J6_9PHAE1.690e-2654.40S4 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A1X6Z3Y8_9RHOB8.230e-1534.46Pseudouridine synthase n=3 Tax=Roseovarius TaxID=7... [more]
A0A6H5L2H9_9PHAE3.210e-1445.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3M2E3L3_9PROT1.990e-1333.90Pseudouridine synthase n=1 Tax=Alphaproteobacteria... [more]
A0A058ZIG0_9RHOB2.780e-1333.90Pseudouridine synthase n=1 Tax=Actibacterium atlan... [more]
A0A350AJK0_9RHOB4.590e-1334.46Pseudouridine synthase (Fragment) n=2 Tax=Rhodobac... [more]
A3VHQ4_9RHOB6.140e-1333.33Pseudouridine synthase n=3 Tax=Roseobacteraceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5355contigL-elsbetiae_contig5355:1543..8825 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size752
Cds size261
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5355.13538.1prot_L-elsbetiae_contig5355.13538.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5355 7292..8351 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816556.629258-UTR-L-elsbetiae_contig5355:1542..17151622816556.629258-UTR-L-elsbetiae_contig5355:1542..1715Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5355 1543..1715 -
1691683645.2344398-UTR-L-elsbetiae_contig5355:1542..17151691683645.2344398-UTR-L-elsbetiae_contig5355:1542..1715Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5355 1543..1715 -
1622816556.6622453-UTR-L-elsbetiae_contig5355:8351..83961622816556.6622453-UTR-L-elsbetiae_contig5355:8351..8396Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5355 8352..8396 -
1691683645.2724078-UTR-L-elsbetiae_contig5355:8351..83961691683645.2724078-UTR-L-elsbetiae_contig5355:8351..8396Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5355 8352..8396 -
1622816556.6737819-UTR-L-elsbetiae_contig5355:8552..88251622816556.6737819-UTR-L-elsbetiae_contig5355:8552..8825Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5355 8553..8825 -
1691683645.2814105-UTR-L-elsbetiae_contig5355:8552..88251691683645.2814105-UTR-L-elsbetiae_contig5355:8552..8825Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5355 8553..8825 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816556.64031-CDS-L-elsbetiae_contig5355:7291..74411622816556.64031-CDS-L-elsbetiae_contig5355:7291..7441Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5355 7292..7441 -
1691683645.247014-CDS-L-elsbetiae_contig5355:7291..74411691683645.247014-CDS-L-elsbetiae_contig5355:7291..7441Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5355 7292..7441 -
1622816556.6508894-CDS-L-elsbetiae_contig5355:8240..83511622816556.6508894-CDS-L-elsbetiae_contig5355:8240..8351Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5355 8241..8351 -
1691683645.2635922-CDS-L-elsbetiae_contig5355:8240..83511691683645.2635922-CDS-L-elsbetiae_contig5355:8240..8351Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5355 8241..8351 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5355.13538.1

>prot_L-elsbetiae_contig5355.13538.1 ID=prot_L-elsbetiae_contig5355.13538.1|Name=mRNA_L-elsbetiae_contig5355.13538.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=87bp
MVHKIRNELVTRHEPEGRATVFNRLAKLEMPDTLMPLITEEELSGMRSGC
TIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG*
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mRNA from alignment at L-elsbetiae_contig5355:1543..8825-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5355.13538.1 ID=mRNA_L-elsbetiae_contig5355.13538.1|Name=mRNA_L-elsbetiae_contig5355.13538.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7283bp|location=Sequence derived from alignment at L-elsbetiae_contig5355:1543..8825- (Laminarionema elsbetiae ELsaHSoW15)
GGGATGCTTTCCTGGGGATGGAGGAGGATAAGGAGGAGGAGAAGCGCAGC
GCCTTCGGCGCGGGCAAAAGCGAGGGGGACGTGGACGAGGTGCTGCGGTC
GTAGATTAAGGACCATTTCATGATGCGCCTGTCTCGCCGCATCGCGAGGT
CCGGCATGGGGGTCCCGTCGAGAGGCCGAGCGCCTGGTGGAGGCGGGGGT
GGTGACGGTGAACGGAACACCGGTGCAGACCTCGGCGCTGAACGTGGGGC
CCCAAGATGTCGTCAAAGTCAAGGTCAGGTTAGGCTTTGGTACCGCTACG
ATTTTTCCCTTCGTCCAGTTAATTTTCTGTTTGCTTGTTTGTTTGTGTGT
GTCGGACGGTCCCGTGCTTGTTTTGTTTTTTTAACGTGACGTGCCGTCGT
CTGTCAATGTCGATGTTGATGACCGCCAGGGGAGGGCACTGGAGCGGCTG
GGGCACCACACGCCCAAGCTGTGGATGGTGCACAAGATTAGGAACGAGCT
CGTCACGAGGCACGAGCCGGAGGGGCGGGCGACCGTGTTCAACAGGCTGG
CCAAGCTCGAGATGCCCGACACGCTCATGCCGCTGGTGCGTGCAAAATAT
GTACAGGGTGCCTAGTGCGTTTAGCGCGGGGGGGGGTGTATGGCGCGCGT
ACACGTGCAGCGGTTACTTTAATTTAAGCCTGGTGTGTGCTCCCGTTTGT
GTATTCCGTATGCGGCGCCACCATTTTCGACGATATATTCGTAGATTCTA
CGAGCATGTTGGCTCGCTCTCATCCACGCACTGCAGTCCTGCTGGTGTTG
GATTTGCCGCGGTTTTTGATCTGATTTGGAAAACGTTTTTGACTTTGGCT
TGGGTTGACCCCGTGTTACGTAGTAGGGCCTTGTGCCGGAGAACGCCATG
AAGGCTCGTCAGTAGGTTTCCATATGTCGACAGCAGCGTCGGGCCGGCTC
TCTGTCAATTTGATTTCGCTCCGTGGCGGAAAGGGGAAAGGAGGGGGGGC
GTACCCGAGACTTTCACAGCGGAGATGGATCAGCACTTGGAAAGGAATAC
CGATGGCACTGCTACCTTCTTGGTCGCGCGCGCACATACATCTGGTTTCT
GCCGTATTTTGTATTCGCCGTTGAAATTAAAGGCGTCTGTTTTGCCATCG
TTAGAGTCGTGGTAGGCTGGGTGCTACAGAGCTGTACAGATATGCATTGG
TTCCTCAGCTGTGGCTGGACCATGTTTTGTTTCTAGACCGCGTCTTCGTA
CTGAGTCGTGTGCCAAGAGGCTAAGACGTTTTAGTAACTGCTGTAATGAC
AGCTGTAGGTCGGGTGGACTAATGGTGTGTTTGTTTCCTCACGGTTCTTG
GTTGATGGTGGACCATTCTTGCTTCACCGCGCAGATAACGGAAGAGGAGC
TGAGCGGCATGCGGAGCGGCTGCACCATCGACGGAGTCCGGTACAAGGGC
ATGTTCGTGAGAGTCGGGACGGGTGGCGGCAAGGGGACGGGGGGCCGCAA
CGCCTGGCTGACCATCAAGTGCACCGAGGGATAAGTGAGTGTGTGTAGAC
GATAGCTCGTTTGCCTTGTCGACAGCTGTTTGGCTGTAATTTATGCGTTT
TCCTAATAGAGGGGTGCCCCCCCGGACTTGCCTCAGAAGATACCATGCCG
ATGTGGTGTAGCTCAAAATGCGGCTGAAAACTGATTTTCAACTTCCGGTG
CATATGTACGTACACACGTAGTAGTGACTGAGACAACAAAATCCACCACC
CCCACAGTTTGGCTATCTCTCTTCTCCTCCCCTGTCAGCCTTCTCCCACA
AGCTGTTGCTTCTGTTCATACATATGATGCATAGACAGGTAAGTGCAGTA
AAAGCAGGGCTCTATACGGTGCCTTTTCTCACGGTTACACCGCACCGCGG
TGCCGTTCTGAAAACCGCGCCGCACCATGATATTTCGAAGCAGCGGTTAA
CCGCACCGTGAAAAACCGTAACATTTCAAACAGCGGTTAAGCGCACCAGA
TGAAAAACTGTGAATTTAGGGACAGCGGTTAAACCGCACCGCGCCTTACG
GTAGGTATCTGAAAAAAATGAAGCTGAAAAATCAGGGTAATCGCCGGGCC
TGTGTTTTGGGACGGGAACAGTTTTGGCGGTACCGCGGTACCTGTTATTG
CGGGGGTACCGCCTTTGGTGGTTGCCAGTACCGCGAATAATGGCGGGACC
TTCGTCGGTGGTTCGCAATATGGCGGTGTCACCTTCGGCGGGAAGCGGTA
GTACCAAGTATGGCCGTAAACCGCTGGCGGGAACACAGTTCGTTCGGTGG
CCAAATGTTTCAGCGATTTGTTTTTTTAGTTTTCCGGCGGTATCCGACGC
CTAGACACAGACATTTCTGTGGCTTCCGAAGAAACGGCAAACCTCTTCCC
GACGATGTCACCAAAAAACACACAAGAACCCCCCCCCCCCCTCCCACCCC
CGAAGGGGCCCTCCTTTTTTTCTGTAACCCTTTTTGAAGGGACTACAAAA
AGGAGGGAGGTGTTGGGNNNNNNNNNNAAACCTATAAGCGACAGGGACAC
AAAAACGCACACAAAAACCCCTCCCCCCACACCCCCCAGAGAACCCCCCC
CCAAAAAAAAAAAAAAGACGAAGGGAAATGCAAATCATAACGATGCAGGT
TTGGACGCGACGTACTCTCTCTGTTAAACTACCGGCGTCCTGCTGACCAT
GAGAGGTTCATTATTTTTTGTCGGTACCTTTTTGTGAGGGTACTGCAATA
TGGCGGTACTGTTTGGGTGGTACTACAACATGGCGGGAATTTTCGGCGGG
AAGCGGTACTTGGCTTTTCGGCGGTACTTTTTCGGCGGGTTGGCAATATG
GCGGTAATTTTTCGGCGGTTAGTGGTTTCTGTTTTTTCGGCGGTCAGGCC
TTTGGCGGTTGCCAGTTTGTGGGAATCCCGCCTACCGTGGGCGGGAAAAC
ACATCGGGAAAATTCCCGACGAATACCCCAGAAAATATCAAGCGGTGCAA
AACCTTGCGCACCGGTTGTTGTAAGGGGCGGTTTTACGTACACCGTACAA
CAACTGTTCATAAAACCGCCCTCGGTCACGATTTTGTTCACGGTATTTTC
GAACATTTACGGTTCCGATTAACTTATAAACCCGACAATTACGGTTCTGG
ATAACCTATAAACTGACATTACGGTTTCGAATATCATATAAACCGTAGAT
TATGCTCTAGATGTGGATGATAAAGGAATTCTACATGCGTTTACACACAC
ACCAGCATACACCACACAACCGTGTGCGCTGCGCTCGCTCCGTGCACGCG
ACACCGCTATAGCTCGCGGACCCCAGATGGCGGAAACCACTGCTACCAGT
CATGCCAAACCTCAGGGTCTGGGGCCGGATCCCCCACACCCGACAACACA
ACTACGAACCCCCCCTGTGAATGGTGCCACCGCACCTTCCTAGCCGCCTA
ACCCTACCGGCGTCACGCTGAAGAGCATTCAAGCCACAGTTGTCCACGTT
GCAACCGATGTTAAACCTGAAAACAACTCCGGTGTTTGGGCATACTTCGT
ACTTCACTTAGTTCGCCAAGGCAGTGAACGACAATAGGGAAAAGTATCTG
GTGTGAGGTTCAAACACCGGCGGGAGAGATCTGCCGCTCTGAGTACAAGG
AAACATCAGCGAACCGTATGGATTTTGGTGGTTAACGGTGAAATTTCGGC
GTTTTTTCCCCACGGCGGTGCACCGTGTGATTTTGATACCCATTTTCACG
AAATTTGCCTTGTATTAACCTTTCCCTTGAGGGCCAATGGGGGAGCCCCC
CCCCCCGCCCCATCCTCCAAGGAAAGGAACGAAACAGCTGACCCTCCTTC
TGAAAGGACCGGTTGCTGCTTCTCCGAACAGCTACTTCTCCTTTTCCAGA
ACAAGTTACTGCTCTCCCCGTCGTTTCCCCATCCAGCGTGAAATTCTGGG
AGGGTGGGCGGGAGACAACAATATACCGAAGAATGGTTCCGTTGTATGGG
CCTGCTCCATCGCACGACAGTTCCTCATACTACGATATCCTCCATCCCCA
GCATCTAAAGGACAGGTTCCGTATCCCGGTATCGTCCTTATTAAATGGAT
TGTTCCGTTTGATACAGCATCCTCCCACCCTTGTCAACAGGACCAGAAAT
GGTTCCGTACCACGGCATCCTCCCTATGGATTGTTCCGTCTGATACGGTA
TCCTCCAAATTTGGCCCACTGTAGGACAGGTTCCGCATCCCGGCATCCTC
CCTCAATGGATAGTTCCGTTTGATACAGTGTCCCCCCACCCTTGTCAACA
GGACCAGAAAATGATTCCGTATTGTCGGCATGCTCCATCCTCAGACGGTT
CCAGACACTACGATATCCTCCATTCTCGACCCCGCTACAGAATAAGTTCC
GTACCACGGCATCCTTCCCTAAATGGATTGTTCCGTTAGATACTGTATCC
TCGCGTCCTTGTCAACAGTACCATAAAAAGGTTTGAGCCCCCCTATACAT
TGGTTCCGAATACTCCACATTATTCCGTTCTAACCGGTTCCGTGTTTCTG
CCTGCTCCACCCTGACCAGATAGACCCCGACACCATAGACCCCTTTCCAA
CGCCCGAAAATAAATCCCATTTTCAAATCCTCCCCTTTCCAAGACCCAAA
CATTTAATATACCCATTTTCAATCCAGCAACCCACCCCTTTCCCAGACCC
AAAATTTAACATACCCATTTTCACATCCAGGGAGGGTGGGTGGGAAAAAG
AAAGAGCGATGGCCAAAAACGGGTACGCCCGAATGGTATCCGGCCAGAAA
CGGGTACCCTATTGAATATAACCAATGAAAGTTCCCGCCCCGTACCCAAT
CCTGGCCGCATTTCCGCCGGGTACACCCGAATCTGGCTATTCAACCCTCG
AAGTCGTACCCGGTTCTCTTTACCCGTACCCGATTATAGCCACAGCAGAC
TACTCAAACAACAGCCCACACACGCACAAGCGCACGACTTTTTTTCTTCC
TCGGCGTCGAGTTTGCCTTGCTTTGTGACCAAGGGCCCCCAAGGATGTTT
TGGACTAGAGAGCTATTGCGAGAAACAACAACATCGACAATGCAGCCGCG
TCACCGCGGTGGCCACGCCAAGGCGCGGCAGAACATAATCATAGTATTAG
GGGCAAGAACTTGACCACCGAACCGATCATGAGTGATGGTGTTCGCCATG
GACAACGACGACGTCAAAGGCTCTAATGATACATACACGACAGATGATGA
CGGTTCCGAAACTCCAAAGGCTCACATGGTCCGGGGAAACTTTCCGTGTG
GAAGTACTAAGGTACCCGTTCTTGGCCGGGTACCGTTCGGGTGTACCCGT
TTATGGCCATTGCCCTAAAAATAACCAGGAAAAAATCGCATGAACGCAAG
TCTCCCTTCTGCGCCGTCTCTCTCCTCCTCGCTCCCGCCCTTGCTCTTCT
TCTCTCCTTCTTTCAACCGCTTTCTTCTCTCCTCGCTTTGGTTTCGATAA
TTGTCGTGCGTGTGCGTGGTAACTCGCGGGCCTTCCTTCTAGACTTTAAA
CAGTCCTGAGATCTTTCTTTGTTGCTGAAATTCCGGCCCTTCCCATCGAA
ACACCAGGTTGTACTCATCCAACCTCGACTTCCGTACAACCTTTACTTTT
GACATCCATTTTCACGAAATTTTCCTTTCATTAACCTTTCCCTTGAGGGG
CAATGGGGGAGCCCCCCCCCCCCCACCCCATCCTCCAAGGAAAGGGAGGA
AACAGCTGACCCTCATTCTGAAAGGACCGGTTGCTGCTTCTCCGAACAGC
TACTTCTCCCGTTCGGAAGCAGTTTCCTCTCTTCAACGCATTTTATTTTT
ATTTTTATTTGAGCACCGTCCCTTGTCCCGGCTGCCTCTCATACTCCCCC
GCCCTCGCCTCCAACACTCCGGATACCGATGTTGGCCCCAAGATCCTCAT
CAAAGCCCCCACTCACTCTCCGGCGAACTCCTTCCCCTTCCTGCCCCGAC
ACTTCATCACCCGTGATACCGTCGACGCATTATCCGCCCTTATTAGTACA
GCATCTCCTTCCCTCTCCGGTCTGTCCCTCGTCCTCCGGATCATCCCGTG
TACGTTTATGACTGCCGCGACCACCTCCTAAACGTTGATCGGAATGCGAT
CTCCTTCCATCTTTGGGTTGCATGCTACCGTTCTCTGCACGATCTCATCT
GGCAGGTTCCATCTCCAATAGACTCTCTTCACCCCACATGAACCCCCCAA
CGCCCGCAACGACGCGTCCGCAAACAACAGCCTCACTGGCTTCTGCTCCA
CGAAAGTGAACGCTGGAGATGTTATCATATCCCCTACTCTACACCCTTCC
CTCCCCAAAAATAACCTCCACCATCCCAGATCTGCCATAAACTCCGGGGT
CAACTTCAGCTTCCTCTTCTTCTCTTTCAACTTCCTATGCATACCCCAAG
CTTCCCCGCTGCCCGCTTTCTCGCTCCCACTCAGATGCAGATTCGTAAGC
TGCAGAAGCCTGCGTACGTAGTACCTCGCAGGCTGAATCACGAAAGCGGC
GTGATGAAGCTTCCCTGCCAACGACAACATTTCCTCGACCGTGGCCTCCT
TCCGACCTTGCGGCCACCTCCTCAACAATGCACGGATGGCCTCCACCTTC
CTCACCGGCAACCCTAGCGTCAAATCCTCCGTGTCCACCCTATACCCCAA
AATTTTCATCGCAGGCGCCCAGTTTGTAGTCTTCTTTTTCGACAACACCG
GCTCCTCCCCCTCCCCCCTCATGTTGGTTTGTCGTTGGTGTAGAATATGT
TTGCAGTACGCGTATGTCTTGGCCGGGCGGTCTGTTTGCTCTTCAGGTAC
CTTTCCTCCCGCATGTAGCGTTTGCGGTGCACTGGTTGCCATGTGCCGAA
CTTAGCCCCTATATTGTACATCCTTGGGCTTGTAGTCTCGCCTGCAATGC
CGAGGTGGAGCTTGCATTCGGGCTCGCTCGTCATCTGCGTTTGGTCCCAT
CGATGATTCCCTCGTGTGAATGTGTGTCTTTCTCTTTTTTTTCTTGTGCG
TGTTTCGATTGGCTCTTGCCGTCCATTTCATGTACCGGTTCTCCCGTTGC
ATATTTGAAGGTCCGCGATGTTGAGGGCCAGCTAGCCTTTGGGGTGCCGG
AGGAACGCCTGGCCGGGCACGCCTTCCACACCTATAGCCTCGATACCAAG
GACAGAACGTGAGAGCCAAGATGCATGGTCCCTGTTATACAAATATGATA
GCAATTTACAATTTACAGCGTGCTTGGGCGGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5355:1543..8825-

>mRNA_L-elsbetiae_contig5355.13538.1 ID=mRNA_L-elsbetiae_contig5355.13538.1|Name=mRNA_L-elsbetiae_contig5355.13538.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=522bp|location=Sequence derived from alignment at L-elsbetiae_contig5355:1543..8825- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGCACAAGATTAGGAACGAGCTCGTCACGAGGCACGAGCCGGAGGG
GCGGGCGACCGTGTTCAACAGGCTGGCCAAGCTCGAGATGCCCGACACGC
TCATGCCGCTGATGGTGCACAAGATTAGGAACGAGCTCGTCACGAGGCAC
GAGCCGGAGGGGCGGGCGACCGTGTTCAACAGGCTGGCCAAGCTCGAGAT
GCCCGACACGCTCATGCCGCTGATAACGGAAGAGGAGCTGAGCGGCATGC
GGAGCGGCTGCACCATCGACGGAGTCCGGTACAAGGGCATGTTCGTGAGA
GTCGGGACGGGTGGCGGCAAGGGGACGGGGGGCCGCAACGCCTGGCTGAC
CATCAAGTGCACCGAGGGATAAATAACGGAAGAGGAGCTGAGCGGCATGC
GGAGCGGCTGCACCATCGACGGAGTCCGGTACAAGGGCATGTTCGTGAGA
GTCGGGACGGGTGGCGGCAAGGGGACGGGGGGCCGCAACGCCTGGCTGAC
CATCAAGTGCACCGAGGGATAA
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