mRNA_L-elsbetiae_contig5331.13499.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5331.13499.1
Unique NamemRNA_L-elsbetiae_contig5331.13499.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5331.13499.1 vs. uniprot
Match: A0A6H5KKD9_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKD9_9PHAE)

HSP 1 Score: 472 bits (1215), Expect = 5.560e-145
Identity = 260/326 (79.75%), Postives = 279/326 (85.58%), Query Frame = 1
Query:    4 GLVVMSRELLVRQ---VRAAEASGPPATSLYGF--DAETTRKSPAVATQLNALLRRSALNVARDPYLAALHLVLTTFVGLVVGSLFRDLGRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMSLFVHERASGAYGAAAHLAAAASVDALACRVLPPVLLALTVRPLAGLRADSLPGLIGGLVAFNLSLAGVLAACGAGAKSSQEALATGCLVVLFSALLSGFLVANDSLPRAWGALAWLSPIGRGFEALVANEFSAYGAVFRLSTKIGETT-AYTEPLTGDEVLHCFGFDGGRYWADLGVLAAVGGCGLALAFVFLKRSR 963
            GLVVM R+ LV Q   VRAAE SGPP TSL G    A T R  P V TQL+ALL+R+++NVARDPYLA LH+VLT FVG+V GSLFRDLGRLNG TAGVQDRLGVVFLLLL+LSLLCLTSLAAWRKQM+LFVHERASGAYGAAAHL AAA+VDALACRVLPP+LLALTV PLAGLR   L GL GGLVAFNLSLAGVLAACGAGAKSSQEALATGCLVVLFSALLSGFLV+ D LP AWGALAWLSPIGRGFE+LVANEFS YGAVFRLSTKIG     YT+P+TGD++L CFGF  GR   DLG+LAAVGG GLALA VFLKRSR
Sbjct: 1744 GLVVMPRQQLVEQASEVRAAETSGPPPTSLLGIHGSAMTRRPPPPVCTQLSALLQRASINVARDPYLAGLHIVLTVFVGVVFGSLFRDLGRLNGCTAGVQDRLGVVFLLLLFLSLLCLTSLAAWRKQMTLFVHERASGAYGAAAHLTAAAAVDALACRVLPPILLALTVSPLAGLRPGGLFGLAGGLVAFNLSLAGVLAACGAGAKSSQEALATGCLVVLFSALLSGFLVSKDDLPAAWGALAWLSPIGRGFESLVANEFSPYGAVFRLSTKIGSAPIVYTDPMTGDQILRCFGFSSGRTLTDLGILAAVGGGGLALALVFLKRSR 2069          
BLAST of mRNA_L-elsbetiae_contig5331.13499.1 vs. uniprot
Match: A0A6H5L0D0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D0_9PHAE)

HSP 1 Score: 369 bits (948), Expect = 1.050e-120
Identity = 206/320 (64.38%), Postives = 234/320 (73.12%), Query Frame = 1
Query:    1 GGLVVMSRELLVRQVRAAEASGPPATSLYGFDAETTRKSPAVATQLNALLRRSALNVARDPYLAALHLVLTTFVGLVVGSLFRDLGRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMSLFVHERASGAYGAAAHLAAAASVDALACRVLPPVLLALTVRPLAGLRADSLPGLIGGLVAFNLSLAGVLAACGAGAKSSQEALATGCLVVLFSALLSGFLVANDSLPRAWGALAWLSPIGRGFEALVANEFSAYGAVFRLSTKIGETTAYTEPLTGDEVLHCFGFDGGRYWADLGVLAAVGGCGLALAFVFLKRS 960
            G LVVM RE LV +V  AE++ PP+             +P V TQL AL+ R+  +VARDPYLA LHLVLT  VGL+VGSLF DL   N  TAG+Q RLGVVF LLL LS LCLTSLA+W +QMSLF HER SGAYGA AHLA +   DAL CRVLPPVLLA TVRPLAGLR  SLPGL  GLV FN+++A VLAACGAGA+S QEALA GCL VLFSALLSGFLVA D LP  WG L W SPI  GFEAL+ NEFS YGA+F L+T I   TA   PLTGD +L CFGF+ GR+  D+G+LAA+GG GL LA+  LKR+
Sbjct:   19 GLLVVMPREELVAKVLCAESAAPPS-----LGQNLLAWTPPVTTQLRALMGRAVRDVARDPYLATLHLVLTPLVGLLVGSLFGDLRHDNDQTAGIQGRLGVVFFLLLLLSFLCLTSLASWVRQMSLFRHERESGAYGALAHLATSFLADALVCRVLPPVLLAATVRPLAGLRYGSLPGLCAGLVVFNVAVAAVLAACGAGARSPQEALAMGCLFVLFSALLSGFLVARDDLPGVWGGLLWASPIAHGFEALLINEFSEYGALFTLTTVISGVTASVGPLTGDSILSCFGFENGRFSMDMGLLAAIGGAGLLLAYALLKRA 333          
BLAST of mRNA_L-elsbetiae_contig5331.13499.1 vs. uniprot
Match: D8LNV5_ECTSI (ATP-binding cassette superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV5_ECTSI)

HSP 1 Score: 345 bits (885), Expect = 2.270e-100
Identity = 197/320 (61.56%), Postives = 227/320 (70.94%), Query Frame = 1
Query:    1 GGLVVMSRELLVRQVRAAEASGPPATSLYGFDAETTRKSPAVATQLNALLRRSALNVARDPYLAALHLVLTTFVGLVVGSLFRDLGRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMSLFVHERASGAYGAAAHLAAAASVDALACRVLPPVLLALTVRPLAGLRADSLPGLIGGLVAFNLSLAGVLAACGAGAKSSQEALATGCLVVLFSALLSGFLVANDSLPRAWGALAWLSPIGRGFEALVANEFSAYGAVFRLSTKIGETTAYTEPLTGDEVLHCFGFDGGRYWADLGVLAAVGGCGLALAFVFLKRS 960
            G LVVM RE LV +VR AE++ PP+        +    +P V TQL AL+ R+  +VARDPYLA LHLVLT  VGL+VGSLF DL R N  TAG+Q RLGV+F LLL LS LCLTSLA+W +QMSLF HER SGAYGAAAHLA +   DAL CRVLPPVLLA TVRPLAGLR  SLP L  GLV FN+++A VLAACGAGA+S QEALA GCL VLFSALLSGFLVA D LP  WG L W SPI  G           YGA+F L+T I   TA   PL+GD +L CFGF+ GR+  D+G+L A+GG GL LA+  LKR+
Sbjct: 1678 GLLVVMPREELVAKVRCAESAAPPS-----LGQKLLAWAPPVTTQLRALMGRAVRDVARDPYLATLHLVLTPLVGLLVGSLFGDLRRDNDQTAGIQGRLGVIFFLLLLLSFLCLTSLASWVRQMSLFRHERESGAYGAAAHLATSFLADALVCRVLPPVLLAATVRPLAGLRYGSLPDLCVGLVVFNVAVAAVLAACGAGARSPQEALAMGCLFVLFSALLSGFLVARDDLPGVWGGLLWASPIAHG----------EYGALFTLTTVISGVTASVGPLSGDNILSCFGFENGRFSLDMGLLVAIGGAGLLLAYALLKRA 1982          
BLAST of mRNA_L-elsbetiae_contig5331.13499.1 vs. uniprot
Match: A0A8J4D5E3_9CHLO (ABC transporter domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D5E3_9CHLO)

HSP 1 Score: 152 bits (385), Expect = 2.270e-35
Identity = 114/282 (40.43%), Postives = 151/282 (53.55%), Query Frame = 1
Query:  133 QLNALLRRSALNVARDPYLAALHLVLTTFVGLVVGSLFRDLGRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMSLFVHERASGAYGAAAHLAAAASVDALACRVLPPVLLALTVRPLAGLRADSLPGLIGG----LVAFNLSLAGVLAACGAGAKSSQEALATGCLVVLFSALLSGFLVANDSLPRAWGALAWLSPIGRGFEALVANEFS-AYGAVFRLSTKIG---ETTAYTEPLTGDEVLHCFGFDGGRYWADLGVLAAVGGCGLALAFVFLK 954
            Q+  L RR A  + R P L  LH + T F+ L +G+++   GR    T G+QDR G +F +LL+LSLL L+SL  WR +  LF+ ERASG YG AA+  A    D L  RVLPP L +     + GLRA   PG +G     LV  N++ A    + GA   S   A   G L VL SAL  GFL++   +PR  G LA LS +   FEAL+  EF+ A G  F    + G   E   Y + +TGDEVL  FGF    +W+D+G L  +    L   F+ L+
Sbjct:  505 QVAVLSRRRAAGLIRHPMLVTLHFLATGFMALGLGAIYWHTGR---DTGGIQDRFGALFFMLLFLSLLSLSSLPVWRDEALLFMRERASGVYGTAAYFTAVVLWDVLPLRVLPPGLFSKLSYHMIGLRAS--PGSLGAHWLVLVVANITAAAANMSIGAAVGSVSLANMLGSLCVLISALFGGFLLSRSRMPRLVGWLADLSYVRYAFEALLIGEFAGATGFRFTGYLEPGTPPEQVPYVD-VTGDEVLQTFGFRTDAWWSDVGALLLLMCAFLTSTFLLLR 780          
BLAST of mRNA_L-elsbetiae_contig5331.13499.1 vs. uniprot
Match: A0A7R9Y6A1_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9Y6A1_MICPS)

HSP 1 Score: 148 bits (373), Expect = 6.930e-34
Identity = 118/343 (34.40%), Postives = 169/343 (49.27%), Query Frame = 1
Query:   40 QVRAAEASGPPATSLYGFDAETTRKSPAVAT---QLNALLRRSALNVARDPYLAALHLVLTTFVGLVVGSLFRDLGRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMSLFVHERASGAYGAAAHLAAAASVDALACRVLPPVLLALTVRPLAGLRA---DSLPGLIGGLVAFNLSLAGVLAACGAGAKSSQEALATGCLVVLFSALLSGFLVANDSLPRAWGALAWLSPIGRGFEALVANEFSAYGAVFRLSTKIGETTAYTE-PLTGDEVLHCFGFDGGRYWADLGVLAAVGGCGLALAFVFLKRSRA*WLTRKLAWQWMMRCASRIC-RGNGEC 1044
            +VR  +  G          A  T  +  VA+   Q+ ALLRR   NV R P+L  LH V T    L +G +F   G+    T G+Q+R+G +F +LLYL+L+ L+SL  WR+   LF+ ER++GAYG  A+  +    D L  RVLPP    L    + GL     D L   +  L+  N++   +  A GA ++S   A A   L  L +AL  GFL+  D +PR    +A +S +  G+EALV NEF+     F L++    TT   E P+ G++VL  FGF       D+ V+ A        ++V L+ +      R+ A  W    A R C R  GEC
Sbjct:  291 RVRCEDGDGXXXXXXXXXXAAATPLTKYVASYPRQVRALLRRMVRNVRRHPFLILLHFVATGVASLGLGGVFFAAGK---DTGGIQNRMGCLFFILLYLALMSLSSLPVWREDRLLFLRERSNGAYGVNAYFTSTLLFDVLPMRVLPPFFFGLITYQMIGLNEGDEDCLAWFVLTLIVTNVAATCMCMAIGAASRSVASANAIASLCFLVAALFGGFLLNKDQIPRYARWIAAVSFVNYGYEALVVNEFADNPRTFTLTSGWNSTTLPNEVPVPGEKVLSTFGFHVAEVSPDVAVVCAQAAFFACASYVMLRNAE-----RETAPTWSG--AWRACARFVGEC 623          
BLAST of mRNA_L-elsbetiae_contig5331.13499.1 vs. uniprot
Match: A0A835W233_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835W233_9CHLO)

HSP 1 Score: 148 bits (374), Expect = 1.270e-33
Identity = 107/283 (37.81%), Postives = 149/283 (52.65%), Query Frame = 1
Query:  115 SPAVATQLNALLRRSALNVARDPYLAALHLVLTTFVGLVVGSLFRDLGRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMSLFVHERASGAYGAAAHLAAAASVDALACRVLPPVLLALTVRPLAGLR---ADSLPGLIGGLVAFNLSLAGVLAACGAGAKSSQEALATGCLVVLFSALLSGFLVANDSLPRAWGALAWLSPIGRGFEALVANEFSAYGAVFRLSTKIGETTAYTEPLTGDEVLHCFGFDGGRYWADLGVLAAVGG--CGLALAFVF 948
            SP    QL AL  R   N  R P+  AL+   T  V + +G +F++ G     TAG+Q+RLGV+F +LLYLSL+ L+SL  WR +  LF+ ERASG YG  A+ AA    D L  RVLPP   AL    + GL    A  +   IG LV+ N++ A +  A GA A S+  A   G L ++   L  GFL+  D++P     ++  S     +EAL  NEF  +   F  +  I  +      ++GD VL  FGFD   ++ DL +LA +G   CGL   F++
Sbjct:  855 SPPYLLQLRALSVRLLRNTYRHPFSVALNFAATLAVAVCLGLIFKNSGT---ETAGIQNRLGVLFFMLLYLSLMALSSLPIWRDEKLLFMRERASGVYGTPAYYAAVVLFDLLPLRVLPPSFFALATYWMVGLHPSCAACILWFIGILVSTNITAATMCQAIGAAAPSNAVANLVGSLTLMLLLLFGGFLLNKDAVPAYCAWVSRASFFNYAYEALAINEFHHFPLDFTFTAPINTSALPPLRISGDGVLKEFGFDVDLFYLDLTMLAVLGAACCGLTYFFLY 1134          
BLAST of mRNA_L-elsbetiae_contig5331.13499.1 vs. uniprot
Match: A0A835XJI5_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XJI5_9CHLO)

HSP 1 Score: 148 bits (374), Expect = 1.270e-33
Identity = 104/276 (37.68%), Postives = 143/276 (51.81%), Query Frame = 1
Query:  133 QLNALLRRSALNVARDPYLAALHLVLTTFVGLVVGSLFRDLGRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMSLFVHERASGAYGAAAHLAAAASVDALACRVLPPVLLALTVRPLAGLR---ADSLPGLIGGLVAFNLSLAGVLAACGAGAKSSQEALATGCLVVLFSALLSGFLVANDSLPRAWGALAWLSPIGRGFEALVANEFSAYGAVFRLSTKIGETTAYTEPLTGDEVLHCFGFDGGRYWADLGVLAAVGGCGLALAFVFL 951
            QL AL  R   N  R P+  AL+ V T    + +G +FR  G     T+G+Q+RLGV+F +LLYL+L+ L+SL  WR +  LF+ ERASG YG  A+ AA    D L  RVLPP   AL   PL GL    A  +   I  LV+ N++ A +  A GAG+ S+  A   G L ++   L  GFL+  D++P     L   S     +EAL  NEF  +   F  +  I  +      ++GD VL  FGFD  R++AD   L A+G       ++ L
Sbjct:  903 QLRALSGRLLRNTYRHPFTVALNFVATLAAAVCLGLIFRHAGT---DTSGIQNRLGVLFFMLLYLALMALSSLPIWRDEKLLFMRERASGVYGTPAYYAAVVLFDLLPMRVLPPTFFALATFPLVGLHPSCASCILWFIAILVSTNITAATLCMAVGAGSPSNAIANLVGSLGLMLLLLFGGFLLNKDAVPSYCSWLEAASFFNYAYEALAVNEFHHFPLDFTFTAPINTSVLPPLRISGDGVLKEFGFDVDRFYADYAALLALGAAFCGATYLLL 1175          
BLAST of mRNA_L-elsbetiae_contig5331.13499.1 vs. uniprot
Match: A0A150GKY4_GONPE (ABC2_membrane domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GKY4_GONPE)

HSP 1 Score: 139 bits (351), Expect = 5.470e-32
Identity = 112/283 (39.58%), Postives = 144/283 (50.88%), Query Frame = 1
Query:  133 QLNALLRRSALNVARDPYLAALHLVLTTFVGLVVGSLFRDLGRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMSLFVHERASGAYGAAAHLAAAASVDALACRVLPPVLLALTVRPLAGLRADSLPGLIGGLVAFNLSLAGVLAAC-----GAGAKSSQEALATGCLVVLFSALLSGFLVANDSLPRAWGALAWLSPIGRGFEALVANEFS-AYGAVFRLSTKIG---ETTAYTEPLTGDEVLHCFGFDGGRYWADLGVLAAVGGCGLALAFVFLK 954
            QL  L RR A  + R P L ALH   T  +   VG+++   GR    T G+QDR G +F +LL+LSLL L+SL  WR +  LF  ERASG YG AA+  A    D L  RVLPP L  L   P+ GLRAD        L+   L+LA V AA      GA  +S   A   G L VL S L  GFL++ + +PR    +A LS +   FE L+  EF  A G  F    + G   +   Y + +TGDEVL  FGF    +  D+G L  +    L   F+ L+
Sbjct:  202 QLAVLSRRRATGLYRHPMLVALHFASTGLMAAGVGAIYWHTGR---DTGGIQDRFGCLFFMLLFLSLLSLSSLPVWRDEALLFRRERASGVYGTAAYFTAVVLWDFLPLRVLPPALFTLVSYPMVGLRADPRSAAAHWLL---LTLANVTAAAANMSIGAAVESVSLANMIGSLCVLVSTLFGGFLLSRNRMPRLVAWVADLSYVRYAFECLLVGEFGGATGFRFTGYHQPGTPPDQVPYVD-VTGDEVLQTFGFRSDAWLRDVGCLLCLMVAFLTSTFLLLR 477          
BLAST of mRNA_L-elsbetiae_contig5331.13499.1 vs. uniprot
Match: A0A7S0KF63_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KF63_MICPS)

HSP 1 Score: 141 bits (355), Expect = 1.130e-31
Identity = 101/277 (36.46%), Postives = 147/277 (53.07%), Query Frame = 1
Query:  133 QLNALLRRSALNVARDPYLAALHLVLTTFVGLVVGSLFRDLGRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMSLFVHERASGAYGAAAHLAAAASVDALACRVLPPVLLALTVRPLAGLRADS---LPGLIGGLVAFNLSLAGVLAACGAGAKSSQEALATGCLVVLFSALLSGFLVANDSLPRAWGALAWLSPIGRGFEALVANEFSAYGAVFRLSTKIGETTAYTE-PLTGDEVLHCFGFDGGRYWADLGVLAAVGGCGLALAFVFL 951
            Q+  L +R + NV R P+L  LH V T    + +G++F D GR    T G+Q+R+G +F +LLYL+L+ L+SL  WR+   LF+ ERA+G YG  A+ A+    D L  RVLPP    L    + GL   +   L   +  L+A N+  + +  A GA A+S   A     L  L + L  GFL+  D +P     +  LS I  G+EALV+NEF+     F L++    +T   E P+ G++VL  FGF  GR   DL ++ A      AL++  L
Sbjct:   73 QVAMLWQRMSRNVRRHPFLILLHFVATGAAAVSIGAVFFDAGR---DTGGIQNRMGSLFFVLLYLTLMSLSSLPVWREDRLLFLRERANGVYGVNAYFASMLLFDLLPMRVLPPFFFGLMTYQMVGLNEGTEYCLAWFVATLIATNVCASCMCMAVGAAARSVAAANVIASLCFLAAILFGGFLLNKDQIPAYASWVNNLSFINYGYEALVSNEFADNPRTFTLTSGWNSSTLPNEVPVPGEKVLSTFGFRAGRVARDLCLVCAQAAGFAALSYALL 346          
BLAST of mRNA_L-elsbetiae_contig5331.13499.1 vs. uniprot
Match: C1MIB0_MICPC (ATP-binding cassette superfamily n=3 Tax=Micromonas pusilla TaxID=38833 RepID=C1MIB0_MICPC)

HSP 1 Score: 142 bits (358), Expect = 1.270e-31
Identity = 110/311 (35.37%), Postives = 159/311 (51.13%), Query Frame = 1
Query:  127 ATQLNALLRRSALNVARDPYLAALHLVLTTFVGLVVGSLFRDLGRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMSLFVHERASGAYGAAAHLAAAASVDALACRVLPPVLLALTVRPLAGLRA---DSLPGLIGGLVAFNLSLAGVLAACGAGAKSSQEALATGCLVVLFSALLSGFLVANDSLPRAWGALAWLSPIGRGFEALVANEFSAYGAVFRLSTKIGETTAYTE-PLTGDEVLHCFGFDGGRYWADLGVLAAVGGCGLALAFVFLKRSRA*WLTRKLAWQWMMRCASRIC-RGNGEC 1044
            A Q   L  R   N+ R P+L A+HL+    V + VGS+F D+G   G   G+Q+R+G +F +LLYL+L+ L+SL  WR+   LF+ ER++GAYG  A+  +    D L  RVLPP    L    + GL     D L   +  L+  N++   +  A GA ++S   A A   L  L +AL  GFL+  D +PR    +A +S +  G+EALV NEF+     F L++    TT   E P+ G++VL  FGF       D+ V+ A        ++V L+ +      R+ A  W    A R C R  GEC
Sbjct:  876 AKQTRLLCGRLLRNLGRHPFLLAIHLLGAFAVAVGVGSIFYDVGSDQG---GIQNRMGSLFFILLYLTLMSLSSLPVWREDRLLFLRERSNGAYGVNAYFTSTLLFDVLPMRVLPPFFFGLITYQMIGLNEGDEDCLAWFVLTLIVTNVAATCMCMAIGAASRSVASANAIASLCFLVAALFGGFLLNKDQIPRYARWIAAVSFVNYGYEALVVNEFADNPRTFTLTSGWNSTTLPNEVPVPGEKVLSTFGFHVAEVSPDVAVVCAQAAFFACASYVMLRNAE-----RETAPTWSG--AWRACARFVGEC 1176          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5331.13499.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKD9_9PHAE5.560e-14579.75ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A6H5L0D0_9PHAE1.050e-12064.38ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LNV5_ECTSI2.270e-10061.56ATP-binding cassette superfamily n=1 Tax=Ectocarpu... [more]
A0A8J4D5E3_9CHLO2.270e-3540.43ABC transporter domain-containing protein n=2 Tax=... [more]
A0A7R9Y6A1_MICPS6.930e-3434.40Hypothetical protein (Fragment) n=2 Tax=Micromonas... [more]
A0A835W233_9CHLO1.270e-3337.81Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A835XJI5_9CHLO1.270e-3337.68Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A150GKY4_GONPE5.470e-3239.58ABC2_membrane domain-containing protein n=1 Tax=Go... [more]
A0A7S0KF63_MICPS1.130e-3136.46Hypothetical protein (Fragment) n=2 Tax=Micromonas... [more]
C1MIB0_MICPC1.270e-3135.37ATP-binding cassette superfamily n=3 Tax=Micromona... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5331contigL-elsbetiae_contig5331:1818..6018 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score477.2
Seed ortholog evalue5.8e-132
Seed eggNOG ortholog2880.D8LNU0
KEGG koko:K05681
KEGG TC3.A.1.204
KEGG Pathwayko01523,ko02010,ko04976,map01523,map02010,map04976
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1131@1,KOG0061@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04090,ko04147
Exons4
Model size1801
Cds size954
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5331.13499.1prot_L-elsbetiae_contig5331.13499.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5331 2650..6003 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816553.129793-UTR-L-elsbetiae_contig5331:1817..26491622816553.129793-UTR-L-elsbetiae_contig5331:1817..2649Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5331 1818..2649 -
1691683642.7186022-UTR-L-elsbetiae_contig5331:1817..26491691683642.7186022-UTR-L-elsbetiae_contig5331:1817..2649Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5331 1818..2649 -
1622816553.1888392-UTR-L-elsbetiae_contig5331:6003..60181622816553.1888392-UTR-L-elsbetiae_contig5331:6003..6018Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5331 6004..6018 -
1691683642.779087-UTR-L-elsbetiae_contig5331:6003..60181691683642.779087-UTR-L-elsbetiae_contig5331:6003..6018Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5331 6004..6018 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816553.140439-CDS-L-elsbetiae_contig5331:2649..28481622816553.140439-CDS-L-elsbetiae_contig5331:2649..2848Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5331 2650..2848 -
1691683642.735022-CDS-L-elsbetiae_contig5331:2649..28481691683642.735022-CDS-L-elsbetiae_contig5331:2649..2848Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5331 2650..2848 -
1622816553.1528294-CDS-L-elsbetiae_contig5331:3825..43071622816553.1528294-CDS-L-elsbetiae_contig5331:3825..4307Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5331 3826..4307 -
1691683642.747965-CDS-L-elsbetiae_contig5331:3825..43071691683642.747965-CDS-L-elsbetiae_contig5331:3825..4307Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5331 3826..4307 -
1622816553.1646526-CDS-L-elsbetiae_contig5331:4903..51491622816553.1646526-CDS-L-elsbetiae_contig5331:4903..5149Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5331 4904..5149 -
1691683642.757742-CDS-L-elsbetiae_contig5331:4903..51491691683642.757742-CDS-L-elsbetiae_contig5331:4903..5149Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5331 4904..5149 -
1622816553.1779256-CDS-L-elsbetiae_contig5331:5976..60031622816553.1779256-CDS-L-elsbetiae_contig5331:5976..6003Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5331 5977..6003 -
1691683642.7674954-CDS-L-elsbetiae_contig5331:5976..60031691683642.7674954-CDS-L-elsbetiae_contig5331:5976..6003Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5331 5977..6003 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5331.13499.1

>prot_L-elsbetiae_contig5331.13499.1 ID=prot_L-elsbetiae_contig5331.13499.1|Name=mRNA_L-elsbetiae_contig5331.13499.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=318bp
MSRELLVRQVRAAEASGPPATSLYGFDAETTRKSPAVATQLNALLRRSAL
NVARDPYLAALHLVLTTFVGLVVGSLFRDLGRLNGSTAGVQDRLGVVFLL
LLYLSLLCLTSLAAWRKQMSLFVHERASGAYGAAAHLAAAASVDALACRV
LPPVLLALTVRPLAGLRADSLPGLIGGLVAFNLSLAGVLAACGAGAKSSQ
EALATGCLVVLFSALLSGFLVANDSLPRAWGALAWLSPIGRGFEALVANE
FSAYGAVFRLSTKIGETTAYTEPLTGDEVLHCFGFDGGRYWADLGVLAAV
GGCGLALAFVFLKRSRA*
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mRNA from alignment at L-elsbetiae_contig5331:1818..6018-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5331.13499.1 ID=mRNA_L-elsbetiae_contig5331.13499.1|Name=mRNA_L-elsbetiae_contig5331.13499.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4201bp|location=Sequence derived from alignment at L-elsbetiae_contig5331:1818..6018- (Laminarionema elsbetiae ELsaHSoW15)
GGCGGGCTCGTGGTGATGTCACGGGAGCTGCTCGTGCGGCAGGTGGGCGG CGGGGAAGAGGAGGGGAGGGAAAGAGCGCGTTTGTTTGTTTTTTGCTTGC CTTGGTTGTTGGTTACGGTTGTTTTTGGCAAGCAGAGGAATAACCGGGCG TGGAGGAGGCGCGTGCGCGTTCGTTTTTTTGGATTATTTTTCGTTTTGTG GGTCTGTCGGCAAACACGTGTACATATGTGCTAAATGCTTTTGGGCTCTT CTATTGAAATATCGCTTGTGCAGGCAGCAGAGTTCATTTGGTGTGTTGGC GGGGGTAACGGATTCATGACTAGCAACTCGATCACGAGTCGTCCATATTT CGGATCGACTGAGCTGCAAAAGGCTTGCTGAAAGGTGGCGCATATGTATA GACCAGTTGTTTATTTTCTTCCGTTGCGGTGATGTGACAGATCTTTTCAG TCTTTTCCGTCTTTCTTCATTGCTGAGTTTGCCGTTTCGGAGCGACTGAC CTATGCTCCACGAGCGCTCTCTGGCGACGCACCCGGTTCGCCCCGCTCAT GCTCAGACACGTTACAGTAAATTCCGACATTTCTACCCCTCTGAACCGCC TCCTTTTGTCCCTCTTGTGTGGATCTGCTCCGGTCTGGAAGCAATCCCGC CGCTTCCCTCGTGGCCCCGGCTTGTCCCTTCGGCCTCCCCCCCCCGTCAA TTGCTCCGCTACACGCTTTCAAATAAAAGACGAAGCACGAATTTCGCCCG CGCGATCGTTTCCAAGACGTACCCCATGAACACTTGCTTGTTCGACCAAC CAACCCGCTGCCGCGATAAGTTGCATATAGTCTAATCGCCGTTTCATCCC GTTTCGTTAATCCTGCAAGGTGCGCGCGGCAGAGGCGTCCGGCCCGCCGG CGACCTCCCTCTACGGCTTCGACGCCGAGACCACGAGGAAGTCGCCCGCC GTCGCCACCCAGCTGAACGCGCTGCTGCGGCGCTCCGCCCTCAACGTCGC CCGCGACCCTTACCTCGCGGCGCTGCACCTGGTGTTGACCACGTTTGTCG GCCTCGTGGTCGGGTCTCTCTTCCGCGACCTGGGGCGCTTGAATGGAAGC ACGGCGGGGGTTCAGGTGGGTTTGTGTATGGGGGGGGTGGTTGGACGAAA ATTCCATAGATGGGGCTCTCACGAGCAGTATGCAGCAACCAAAACCCAGT GTCTTTTGGAGGGATGGGTTGGGGTGAGCGTTGATAATCGATCAGGATAG CCCCCGGCAAAGTTGTACGATGGTAAGAATTGAGAGTTTTTTGGTTGATT GCCCTGTTTCGCTTGTTTTTCGTTCCCTCGCACGTGTTCGCCGTCGTTGT TGCGTTTCTCCACTTCTATGGTCACCATAAAAAGACAAAATACATGTGTA TCAGCTCGGGCTTTTGTGTTTGGCCTCTTTGTGGGATGCGCTACATAATG GGTGGTGGAGTCTCAGAAAGCCGTCTTACGTGTTCTGATGTCTTGATTGC GGTGAGAAAGTATAGCTTTCCGTGACAGTGGGTCCTCCGAGAGCTCTCCC GATGGTGCGATGTGGTCGACGATAAAAACCGATTCACGCCATCTAATCCC CTTTGGCCCTCACACTGCGTTGCCCTCGACTCAACCGCAAGAGGACGCAT GATAGCATGCACGTCTGTCTGTGCACCTCTTCTCATTCTTTTGTTGTTGT TCGTTTTGCAGGACCGACTGGGCGTGGTGTTCCTCCTCCTGCTCTACCTG TCCCTGCTGTGCCTCACCTCCCTGGCGGCCTGGCGGAAGCAGATGTCCCT CTTCGTTCACGAGCGCGCCTCTGGCGCCTACGGCGCGGCCGCCCACCTGG CCGCCGCCGCCTCCGTCGACGCCCTCGCCTGCCGCGTGCTGCCCCCGGTC CTCCTCGCCCTCACTGTCCGCCCCCTGGCCGGCCTGCGCGCCGACAGCCT GCCCGGCCTGATCGGGGGCCTCGTGGCCTTCAACCTGTCGCTGGCCGGGG TGCTCGCCGCGTGCGGGGCGGGCGCGAAGTCGTCCCAGGAGGCGCTCGCC ACGGGGTGCCTGGTGGTGCTGTTCTCGGCGCTGCTGTCGGGCTTCCTGGT GGCTAACGATAGTCTGCCGCGCGCGTGGGGGGCGCTGGCGTGGCTGTCGC CGATCGGCAGGGGGTTCGAGGCGCTCGTTGCGAACGAGTTCAGGTGAGAC AGACGGGGGAGAGGCTGTGCACACACGCTGCAGCCATCCCTCTTTTGTTT TTGTCGCGCGTGACAGGTGTGCGTGCGTGGTTCCGCCCACCCTTTGTGCT CGTCAGTAGAAGCACTCGTGCCAACTTGGTGGTTTTAAAAATAAACAATG CATCAACGATGGAACCTAACCCACACTAGAGCAGGACCGCCTACGCAGAA ATATAATTTTATACTACTAACCCTAACCCTAACCCTAACCCTAACCCTAA CCACCGACCCCCCCAAACGGTTTCCATACTTTATCCCATATGTTAGCTTA AGACAAAAACCCCGCGTAGACTACTGCTAGAGCAAGGACTCGATATGGGA TTCAAACGGTATTCCATACAGAGACGTAATATTTTGTGAAGCGAGCAGAA AAACAAACCTAACCTAAAGTATCAGAAGAGTTCAACATCTCCCCTACAAA GATTTGCGAGGTCTGCCAACAAGTATTCCGGCGGGTAGATGCCCGCCATG ATGCCGTAATATTGTTATCACCTTCAAAATAGGAATGCATCGCATTGTTG AACCAAGTTTTGCGCTTCCCTTGTTGGTTGGGTCATCCTGGTGTTGTTTG GTTTGTTTTCGTTGGCCGGCCGTCTGATCTGTGGCCTTTCTTCCTTCCCT CCCTCCATCTTCTCGTTTCTCAGACGAACTCCAATTGTGCTTGCGGTCGT TTGCCTTTTGCCGGTATCACGTCATTTGCTCTTGGTGTGTACTTTGTCTC GTTTGGTTGTCAACCCTAAAACAGATCAGATGGTCGCAGTCGGTGCTTTT TTCGTGATGCCCCCCATGTATATGTATGTAAATATATTCCCTTGCCCGCC ACCCCCGATGCCTTTTTTATCTCTTCGCTCGCCTGTTCCGCCGCCTCGGC TCTACGCCCCCTCTTATTTGATAAAATATATATATACATTATCATGACAT TAAAACAACACGACGCACAGTGCGTACGGTGCGGTGTTCCGGCTGTCGAC CAAGATCGGAGAAACCACCGCGTACACGGAGCCCCTGACGGGGGACGAGG TGCTCCACTGCTTCGGCTTCGACGGCGGGCGCTACTGGGCCGACCTCGGA GTCCTGGCGGCCGTTGGTGGGTGCGGGCTGGCGCTAGCCTTCGTCTTCTT GAAGCGCTCGCGAGCGTAATGGCTGACGCGAAAGCTTGCGTGGCAGTGGA TGATGCGGTGTGCGTCGAGGATATGCCGTGGGAATGGCGAGTGTGTTGGG GGGTGGTTGATGCCGATGTAAGGTGCAGATTTGTTTTTGGGCCCGAACGT GGAGGCAGAGGGGGTTGTTGGGTCTGTCTAGTGGCACTATTAGCGGTATT ATATAGTCTATAGTACTCAGAGTTTTCTGCGACTTTTGGCGGGTTGGCGC AGGTCTGGTTGTTGAAACGTTCGTTTGAAACGTTCGTTCCTGTTTTTTCC TCGACAGCTGGTGGTTTGAAACTGGTGTACAGAGTGCCATGTCTCGTGTG ACAGCCCGTGATATATAGAGCGATGGTCGTCTAGGTACGATGTGGGTTTA CTCTCGCAGCAAGGTAGCAAGCAAGTGAATCGATCTCAAGGTGGGCGCTG CGTCATCCCCAGTGCTTCGAGATAATCTAATACACGTGAGTGGACCTTTA CACCGTGTTGATACCCTGCTGACAGTGGTCGGATCCGCCCTACGGTCACT CGCCCCATAGCGTAGCTTTTTACATGGTTTCAAGGATATCTCTGGGATCT GGAAGTTTAGCTGTCACGCCTGAGTTGGCTCTCTGCGAGCGTCCAGGCGT TCCAATGTTTGGATGACATGGCGTTCGCAGCTTGTGGAGTGACGAGGCGC ACATTGCGCCTTACCTTTGTTGCACTTCCCGGACGGGCATTTTTCGGAGA GGCTTGCATCAGGGTGACACTTGGCACACGAAAAGCGCTGTTTTTCTACC TGGTACGTGGTATGGAGTATGTAGGTACACGCATTATCGGCATCTACTCG C
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5331:1818..6018-

>mRNA_L-elsbetiae_contig5331.13499.1 ID=mRNA_L-elsbetiae_contig5331.13499.1|Name=mRNA_L-elsbetiae_contig5331.13499.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1908bp|location=Sequence derived from alignment at L-elsbetiae_contig5331:1818..6018- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCACGGGAGCTGCTCGTGCGGCAGATGTCACGGGAGCTGCTCGTGCG
GCAGGTGCGCGCGGCAGAGGCGTCCGGCCCGCCGGCGACCTCCCTCTACG
GCTTCGACGCCGAGACCACGAGGAAGTCGCCCGCCGTCGCCACCCAGCTG
AACGCGCTGCTGCGGCGCTCCGCCCTCAACGTCGCCCGCGACCCTTACCT
CGCGGCGCTGCACCTGGTGTTGACCACGTTTGTCGGCCTCGTGGTCGGGT
CTCTCTTCCGCGACCTGGGGCGCTTGAATGGAAGCACGGCGGGGGTTCAG
GTGCGCGCGGCAGAGGCGTCCGGCCCGCCGGCGACCTCCCTCTACGGCTT
CGACGCCGAGACCACGAGGAAGTCGCCCGCCGTCGCCACCCAGCTGAACG
CGCTGCTGCGGCGCTCCGCCCTCAACGTCGCCCGCGACCCTTACCTCGCG
GCGCTGCACCTGGTGTTGACCACGTTTGTCGGCCTCGTGGTCGGGTCTCT
CTTCCGCGACCTGGGGCGCTTGAATGGAAGCACGGCGGGGGTTCAGGACC
GACTGGGCGTGGTGTTCCTCCTCCTGCTCTACCTGTCCCTGCTGTGCCTC
ACCTCCCTGGCGGCCTGGCGGAAGCAGATGTCCCTCTTCGTTCACGAGCG
CGCCTCTGGCGCCTACGGCGCGGCCGCCCACCTGGCCGCCGCCGCCTCCG
TCGACGCCCTCGCCTGCCGCGTGCTGCCCCCGGTCCTCCTCGCCCTCACT
GTCCGCCCCCTGGCCGGCCTGCGCGCCGACAGCCTGCCCGGCCTGATCGG
GGGCCTCGTGGCCTTCAACCTGTCGCTGGCCGGGGTGCTCGCCGCGTGCG
GGGCGGGCGCGAAGTCGTCCCAGGAGGCGCTCGCCACGGGGTGCCTGGTG
GTGCTGTTCTCGGCGCTGCTGTCGGGCTTCCTGGTGGCTAACGATAGTCT
GCCGCGCGCGTGGGGGGCGCTGGCGTGGCTGTCGCCGATCGGCAGGGGGT
TCGAGGCGCTCGTTGCGAACGAGTTCAGGACCGACTGGGCGTGGTGTTCC
TCCTCCTGCTCTACCTGTCCCTGCTGTGCCTCACCTCCCTGGCGGCCTGG
CGGAAGCAGATGTCCCTCTTCGTTCACGAGCGCGCCTCTGGCGCCTACGG
CGCGGCCGCCCACCTGGCCGCCGCCGCCTCCGTCGACGCCCTCGCCTGCC
GCGTGCTGCCCCCGGTCCTCCTCGCCCTCACTGTCCGCCCCCTGGCCGGC
CTGCGCGCCGACAGCCTGCCCGGCCTGATCGGGGGCCTCGTGGCCTTCAA
CCTGTCGCTGGCCGGGGTGCTCGCCGCGTGCGGGGCGGGCGCGAAGTCGT
CCCAGGAGGCGCTCGCCACGGGGTGCCTGGTGGTGCTGTTCTCGGCGCTG
CTGTCGGGCTTCCTGGTGGCTAACGATAGTCTGCCGCGCGCGTGGGGGGC
GCTGGCGTGGCTGTCGCCGATCGGCAGGGGGTTCGAGGCGCTCGTTGCGA
ACGAGTTCAGTGCGTACGGTGCGGTGTTCCGGCTGTCGACCAAGATCGGA
GAAACCACCGCGTACACGGAGCCCCTGACGGGGGACGAGGTGCTCCACTG
CTTCGGCTTCGACGGCGGGCGCTACTGGGCCGACCTCGGAGTCCTGGCGG
CCGTTGGTGGGTGCGGGCTGGCGCTAGCCTTCGTCTTCTTGAAGCGCTCG
CGAGCGTAATGCGTACGGTGCGGTGTTCCGGCTGTCGACCAAGATCGGAG
AAACCACCGCGTACACGGAGCCCCTGACGGGGGACGAGGTGCTCCACTGC
TTCGGCTTCGACGGCGGGCGCTACTGGGCCGACCTCGGAGTCCTGGCGGC
CGTTGGTGGGTGCGGGCTGGCGCTAGCCTTCGTCTTCTTGAAGCGCTCGC
GAGCGTAA
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