mRNA_L-elsbetiae_contig5327.13492.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5327.13492.1
Unique NamemRNA_L-elsbetiae_contig5327.13492.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 1.590e-49
Identity = 138/336 (41.07%), Postives = 188/336 (55.95%), Query Frame = 1
Query:  394 DIEAANDQGSTPLYLAATRGHREIVEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASPLLPST-DSSGATWIPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGEALLRAADCGHEASMKLLLQRATGGR-----AHLNKIRNPEGVTPLLFAAGVGTNPSPRIARLLVDAGADVSSVVQLMRQGRVVGRDV---PLGYALFSLR--VKMLGGQGATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTTKSTSLTVVLPMLRRRAAKRGMLLAALFRYSKQ 1368
            ++ +    G+TPLY AA +G+ +    L                                    KA PLL +  D SG T++PLDAA   GHPEV  ELIRQ GIDGCGG S GV AL  A QF+ + +++  L +AGVVDTG AL+ AA  G E  +K LL++A   +     A++N  R+  GVTPLL+      +  PR+ RLLV+AGAD +S V +  Q  + G DV   PLG  +  +R  VK++G   A+ +QL +LE  RRLL+RV+AV+A SWLW SD       AAA G ++ T  ST++T+ + + RRRA  R + LAAL RYS +
Sbjct:  140 NLNSRRSDGATPLYTAAWKGNVDAARLLLLA---------------------------------KADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFK-NLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNT-RDRGGVTPLLWGI---QHYRPRVVRLLVEAGADTTSPVAVRNQ--LGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTI-TRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSK 434          
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 1.150e-48
Identity = 123/275 (44.73%), Postives = 168/275 (61.09%), Query Frame = 1
Query:  586 KASPLLPSTDSSGATWIPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAG-VVDTGEALLRAADCGHEASMKLLLQRATGGR-AHLNKIRNPEGVTPLLFAAGVGTNP--SPRIARLLVDAGADVSSVVQLMRQGRVVGR-----DVPLGYALFSLRVKMLGGQGATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTTKSTSLTVVL----PMLRRRAAKRGMLLAALFRYSKQV 1371
            KA+PLL S    G +++PL+ A   G+P+VA E+IRQ GI GCGGPS GV+AL  A   +   + +  L+DAG VVDTG AL+ AA+ G   ++K LL+R      A++N  R+P G TP++ A  VG     SP+I RLLVDAGA+ +  V + R   +  R     + PL +    LR   + G+ AT++QLQRL+  R LL R +AV+A SWLW S  P P++A AA G  K  T ST++   L    PMLRR+   RG+LL  LFRYS++V
Sbjct:  168 KANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAAD-EEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTR---ITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEP-PRIAQAA-GDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRKV 436          
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.850e-47
Identity = 120/262 (45.80%), Postives = 155/262 (59.16%), Query Frame = 1
Query:  586 KASPLLPSTDS-SGATWIPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGEALLRAADCGHEASMKLLLQRATGGRA-HLNKIRNPEGVTPLLFAAGVGTNPSPRIARLLVDAGADVSSVVQLMRQGR-VVGRDVPLGYALFSLRVKMLGGQGATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAA-AAEGANKPTTKSTSLTVVLPMLRRRAAKRGML-LAALFR 1356
            KA+ LL S  + SGAT++PLD AV  GH EV  EL  Q G+ GCGG S GV++L LA   Q D D++  L   GVVDTG AL+ AA+   E S+K LLQ   GG A ++N   +P G TPL+       + SPRIAR L+DA AD  S V + + G+    RD PLG+A  SLR   +G + ATE+QL+ L+   RLL +VDAV+A SWLW S   R   A  AA    KPT     L  +  +LR    KRG++ L A++R
Sbjct:  155 KANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQ-DVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGGAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVVLRAVYR 415          
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 2.890e-47
Identity = 123/271 (45.39%), Postives = 163/271 (60.15%), Query Frame = 1
Query:  586 KASPLLP-STDSSGATWIPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVD-TGEALLRAADCGHEASMKLLL--QRATGGRAHLNKIRNPEGVTPLLFAAGVGTNP--SPRIARLLVDAGADVSSVVQLM-RQGRVVGRDVPLGYALFSLRVKMLGGQGATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTTKS---TSLTVVLPMLRRRAAKRGMLLAALFRYSKQ 1368
            KA+PLL  S++SSG +++PL+ A  TG   V  EL+R+ GI  CGGPS G+DAL +A  +    D+++ LMDAGVVD  G ALL A   G EA++  LL  Q      +++N  R+ +G+T LL++     N   +PRI R LVDAGAD +S VQL  ++ R      PL Y       +  G   AT++QL RLE  RR+L+RV AV+A SW+W SDAP       A  AN P T     T LT VLP+LRRRA +R +L   LFRYSK+
Sbjct:  141 KANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYG-QVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTSYVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPL-----LARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYSKK 405          
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 4.080e-45
Identity = 107/240 (44.58%), Postives = 145/240 (60.42%), Query Frame = 1
Query:  661 GHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGEALLRAADCGHEASMKLLLQ-RATGGRAHLNKIRNPEGVTPLLFAAGVGTNPSPRIARLLVDAGADVSSVVQLMRQGR-VVGRDVPLGYALFSLRVKMLGGQGATEKQLQRLEGARRLLMRVDAVYATSWLW-ISDAPRPQVAAAAEGANKPTTKSTSLTVVLPMLRRRAAKRGMLLAALFRYSKQV 1371
            GH EV  ELI+Q G+ GCGG S GV++L LA   Q   D++  L   GVVDTG AL+ AA+   E S+K LLQ +A GG  ++N   +P G TPL+       + SPRIAR L+D GAD  S V + R G     RD PLG+A  SLR   +GG+ ATE+QL+ L+   RLL +++AV+A SWLW  SD P      AA    KPTT   +L  +  +LR    KRG++L A++R ++++
Sbjct:  191 GHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQY-VDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYRAAEEL 429          
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 4.480e-45
Identity = 122/267 (45.69%), Postives = 159/267 (59.55%), Query Frame = 1
Query:  589 ASPLLPSTDSSG-ATWIPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGEALLRAADCGHEASMKLLLQRA--TGG----RAHLNKIRNPEGVTPLLFAAGVGTNPSPRIARLLVDAGADVSSVVQLMR-QGRVVGRDVPLGYALFSLRVKMLG-GQGATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTTKSTSLTVVLPMLRRRAAKRGMLLAALFRYS 1362
            A+PLL  T   G  T +PLD A   GH +V  ELI++ GI+GC   S G  AL  A   Q   D++  L +AGVVDTG+AL  AA  GHEAS+K LL+     GG     A+LN  R+  G TPL+       + +PRI R+LVDAGAD +S VQ+M  +G VV  D PL +    LR K++  G+ AT++ LQRLE   RLL+RVDAV+A SWLW S AP   +  A E    P     +L ++LP+L+RR  +R  L+A L RYS
Sbjct:  264 ANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQ-HLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNA-RDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPF--IGRATE--TDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYS 524          
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 1.610e-44
Identity = 117/274 (42.70%), Postives = 164/274 (59.85%), Query Frame = 1
Query:  586 KASPLLPSTDSSGATW--IPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGEALLRAADCGHEASMKLLLQRATGG----RAHLNKIRNPEGVTPLLFAAGVGTNPS--PRIARLLVDAGADVSSVVQLMRQ-GRVVGRDVPLGYALFSLRVKMLGGQGATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTTKSTS---LTVVLPMLRRRAAKRGMLLAALFRYSKQV 1371
            KA+PLL   + +   W  +PLD A   G   V  EL+++ GI GCGG + GV AL LA   +P  DV+  L  AGVVDTG AL++A   GH   +K LLQ+  G      A++++ R+P G TPL+    VG N S  P++ RLLVDAGAD +S+V+   Q G +     PL  A  +LR+K+   +   ++ L+RLE  RRLL+RV+AV+ATSWLW +  PR  + A    A +  + ST+   L  VLP+LRRRA  RG + A+L RY+ ++
Sbjct:  170 KANPLLTRVNLA---WQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAA-MKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVKL 439          
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 1.470e-42
Identity = 116/266 (43.61%), Postives = 152/266 (57.14%), Query Frame = 1
Query:  595 PLLPSTDSSGATWIPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGEALLRAADCGHEASMKLLLQRATGGRAHLNKIRNPE---GVTPLLFAAGVGTNP-SPRIARLLVDAGADVSSVVQLMRQGRVVGRDVPLGYALFSLRVKMLGGQGATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTTKSTS---LTVVLPMLRRRAAKRGMLLAALFRYSKQV 1371
            PLLP+  SSG T++PLD A   GH  VA EL+++ GI GC G S GVDAL  A   Q   DV+  L DAGVVDTG AL+     G E ++K LL++   G A       P    G TPLL A  V T P SPR+ RLLVDAGAD +  V++        +  PL  A   L  K++    AT +QL+ L  +RRLL++V+ V+ATSWLW   A  P    AA G  +  T+ST+   L   LP++ RR+A+RG  L  +FR +K+ 
Sbjct:  170 PLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQ-HLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPLLSA--VTTGPCSPRVVRLLVDAGADATLAVRVPDGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCP----AAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFRLAKKA 428          
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 4.250e-41
Identity = 135/347 (38.90%), Postives = 178/347 (51.30%), Query Frame = 1
Query:  364 SCKMLVGAGADIEAANDQGSTPLYLAATRGHREIVEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASPLLP-STDSSGATWIPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGEALLRAADCGHEASMKLLLQRATGGR-----AHLNKIRNPEGVTPLLFAAGVGTNPSPRIARLLVDAGADVSSVVQLMRQ-GRVVGRDVPLGYALFSLRVKMLGGQGA---TEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTTKSTSLT-VVLPMLRRRAAKRGMLLAALFRYSKQV 1371
            S   L+ AG++I      G+TPLY AA  G+   V  L                                    KA PLL  ++DS    ++PLD A   GH EV  ELIRQ GIDGCGG S G +AL  A  F    D++  L DAGVVDTG AL+ AA  G EA +K LL++A G +     A++N + N  G+T LL          PR+ +LLV+AGAD +S V +  Q G       PLG     L + +LGG+ A   T ++  +LE  RRLL+R +AV+A SWLW SD P     A A+G  + T  ST+ T  ++ M+ RR   R  LLAAL RYS ++
Sbjct:  130 SVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLA---------------------------------KADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSR-LDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTL-NGVGLTSLLDGI---QRCRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLG-----LTMCLLGGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTI-THATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSSKL 432          
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: A0A6H5JWZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ8_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 3.950e-35
Identity = 117/344 (34.01%), Postives = 174/344 (50.58%), Query Frame = 1
Query:  367 CKMLVGAGADIEAA-NDQGSTPLYLAATRGHREIVEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASPLLPSTDSSGATWIPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGEALLRAADCGHEASMKLLLQRATGGRAHLNKIRNPEGVTPLLFAAGVGTNPSPRIARLLVDAGADVSSVVQLMRQGRVVGRDVPLGYALFSLRVKMLGGQGATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTTKSTSLTVVLPMLRRRAAKRGMLLAALFRYSKQVW--PDMVR 1389
            CKMLV AGA++EAA +  GS P +LAA  GH  +++AL                                    KA+ LL   ++S  +++PLDAA   G   V  EL+ Q GIDGCGGPSRG  AL  A + Q   D +  L  AG+VDTG AL+ A     E S+K LL++++          NP    P +   G G    PRI R++VDA AD +S V++++ G +  ++ PLG A                    +L    RLL+RV+A++A SWLW+SDAP   +A  AE   +      + + +LP+L   + +R  LL+A+ R++ ++   P+++R
Sbjct:   45 CKMLVNAGAELEAATSSNGSRPRHLAADIGHAAVIKALRQAPISTAAGHVEAVRAFLRA---------------KANSLLIRLNASRDSFVPLDAAAGKGRSLVVRELLGQLGIDGCGGPSRGPHALYHAAKEQ-FVDTMAVLATAGMVDTGIALIGAIKENLEGSIKFLLRQSSCKG-------NPP--VPTIEDEG-GRWCFPRIVRMIVDAVADTTSAVRVLKLGLLPVKETPLGLA-------------------HKLSAVHRLLLRVEALHAASWLWVSDAP--DIAHTAEVTKRTKVIPPARSRMLPVLGL-STRRNALLSAVLRWAGRIGSGPELLR 340          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJA9_9PHAE1.590e-4941.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1H7_ECTSI1.150e-4844.73EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
A0A6H5K037_9PHAE1.850e-4745.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVU3_ECTSI2.890e-4745.39EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7G1U9_ECTSI4.080e-4544.58EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FT11_ECTSI4.480e-4545.69EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FVK3_ECTSI1.610e-4442.70EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LL76_ECTSI1.470e-4243.61EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KQV0_9PHAE4.250e-4138.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWZ8_9PHAE3.950e-3534.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5327contigL-elsbetiae_contig5327:9392..12009 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score191.0
Seed ortholog evalue8.9e-46
Seed eggNOG ortholog2880.D7G1H7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1861
Cds size1026
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5327.13492.1prot_L-elsbetiae_contig5327.13492.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5327 9855..11637 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816552.5060453-UTR-L-elsbetiae_contig5327:9391..98541622816552.5060453-UTR-L-elsbetiae_contig5327:9391..9854Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5327 9392..9854 -
1691683642.2766635-UTR-L-elsbetiae_contig5327:9391..98541691683642.2766635-UTR-L-elsbetiae_contig5327:9391..9854Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5327 9392..9854 -
1622816552.5372624-UTR-L-elsbetiae_contig5327:11637..120091622816552.5372624-UTR-L-elsbetiae_contig5327:11637..12009Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5327 11638..12009 -
1691683642.3071334-UTR-L-elsbetiae_contig5327:11637..120091691683642.3071334-UTR-L-elsbetiae_contig5327:11637..12009Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5327 11638..12009 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816552.516871-CDS-L-elsbetiae_contig5327:9854..98971622816552.516871-CDS-L-elsbetiae_contig5327:9854..9897Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5327 9855..9897 -
1691683642.2882757-CDS-L-elsbetiae_contig5327:9854..98971691683642.2882757-CDS-L-elsbetiae_contig5327:9854..9897Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5327 9855..9897 -
1622816552.5269637-CDS-L-elsbetiae_contig5327:10654..116371622816552.5269637-CDS-L-elsbetiae_contig5327:10654..11637Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5327 10655..11637 -
1691683642.2973566-CDS-L-elsbetiae_contig5327:10654..116371691683642.2973566-CDS-L-elsbetiae_contig5327:10654..11637Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5327 10655..11637 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5327.13492.1

>prot_L-elsbetiae_contig5327.13492.1 ID=prot_L-elsbetiae_contig5327.13492.1|Name=mRNA_L-elsbetiae_contig5327.13492.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=342bp
MLVGAGADIEAANDQGSTPLYLAATRGHREIVEALIEAGANVDCRRVGGT
TPLYSAAERGHVGIVKLLLQAKASPLLPSTDSSGATWIPLDAAVATGHPE
VAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGE
ALLRAADCGHEASMKLLLQRATGGRAHLNKIRNPEGVTPLLFAAGVGTNP
SPRIARLLVDAGADVSSVVQLMRQGRVVGRDVPLGYALFSLRVKMLGGQG
ATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTT
KSTSLTVVLPMLRRRAAKRGMLLAALFRYSKQVWPDMVRTG*
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mRNA from alignment at L-elsbetiae_contig5327:9392..12009-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5327.13492.1 ID=mRNA_L-elsbetiae_contig5327.13492.1|Name=mRNA_L-elsbetiae_contig5327.13492.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2618bp|location=Sequence derived from alignment at L-elsbetiae_contig5327:9392..12009- (Laminarionema elsbetiae ELsaHSoW15)
AACGCGGTGCCTCTCCAGGACTAAATTGGACGCATGGACGCAAACGTTGC CCAACTGTTTTTCAACGAATTGCTCCGTGACTCTTTCTGCTTCGGAGAAA ACAGGCGATGCGATGGCCTCGAGGTCCTACGAATCAGCTGCACATGGCTG CAGGAACCGGCTCTGTGAACGCGGTTACGCCGTTGCTTTCCACCGTAAAC ATCAATCAAGGTGACCCGACCGGCTGCACGCCGCTTCATTTTGCCGCCAC CCTGGGGTTTTCGCGGGTCGTGAAGCTCCTTTTGAATAAGGGGGCCAACG TTTCAATACCGAATGATGAAGGGTTCACGGCGCTAATCAGTTCTGCTCAG CAAGGGCACCTGGTCGTGCAAAATGCTGGTCGGGGCCGGGGCAGACATCG AGGCGGCAAACGATCAAGGGTCGACCCCGCTGTACCTGGCTGCCACACGA GGGCACCGCGAGATTGTGGAAGCGCTGATCGAGGCAGGCGCGAATGTCGA CTGCCGTAGGGTGGGGGGAACAACACCACTGTATAGTGCGGCTGAGAGGG GACACGTTGGCATAGTGAAGTTGCTTCTTCAAGCGAAAGCGTCACCGCTG TTGCCGAGCACGGACTCGTCGGGTGCCACCTGGATCCCGCTGGACGCGGC GGTGGCAACGGGTCACCCGGAGGTAGCATACGAGCTGATCCGGCAGCACG GGATCGATGGGTGTGGGGGCCCGAGCCGCGGCGTGGATGCGCTTTGTTTG GCCGTTCAGTTCCAGCCAGACCACGACGTCCTGACCAAGTTGATGGATGC TGGAGTAGTCGATACAGGCGAAGCGCTGCTCCGCGCCGCCGACTGTGGGC ATGAAGCATCCATGAAGCTGTTGTTGCAGCGCGCCACTGGTGGACGTGCG CACCTGAACAAGATCCGCAACCCTGAAGGTGTAACCCCGTTACTCTTTGC CGCTGGCGTAGGCACGAATCCGTCGCCCAGGATCGCGCGATTGCTGGTGG ACGCCGGGGCCGACGTGTCCTCCGTTGTTCAACTTATGAGGCAGGGGCGT GTGGTCGGACGCGACGTGCCTCTGGGATACGCACTATTTTCTCTTCGCGT CAAAATGCTTGGAGGGCAAGGTGCCACAGAGAAGCAGCTCCAGCGGCTGG AGGGCGCCCGCCGCTTGTTGATGAGGGTAGATGCGGTTTATGCAACATCT TGGCTGTGGATTAGCGACGCACCCCGCCCCCAGGTGGCTGCTGCTGCCGA GGGTGCAAATAAACCCACGACGAAATCGACCTCTCTGACGGTAGTGTTGC CGATGTTGAGGCGAAGGGCTGCAAAGCGTGGTATGCTCTTGGCAGCTCTG TTCAGGTGGGTGGTGGGGCTTGCCAAGACACGTTCTGTGACTATGCTTGC TGCTTGGTGTATCGTACAAGCATTGTACCTTGTGATCTGCTGCCCTGTGC TGGTACTCTGTATCGTAGTGGCGTTATTGATTTTGCTGGGAAACGGTCTG GGCCCAGTCCCGACGATACATCTCGGGTTGATCGGGCCGTCCTCCATCAG AACCGGCTGTTTTGTCTTGCTTCCAAACTCCTATCTATTATTTGAACAGC AACAACAGCGATAGCAGCAGCAGCCAGCGAGGTTGCCCCACTCCAGTGCG CCGCCGCCCTCCGCGTGCTCTGTAGAGTAGGGAAGGAGGAAGGGAGTCCG TTTCGTATTCACTCTTGTAGGAGGGCCTGGAGCGGCTTATAACGCGACCG ATGATGTTTTTGTCGACGGGGCGTCAAAAACTCTCCAAGCCCAATGAACG TTTTACAAAACACACGGCCTGTAGTGCCGGCCCTCGACTCCGTCCACTAT GACCGTCGCGCTCTTGCTTTGAAGCGCCGGCGAGGATTGCCCGGGTGACA CTCTAACCCACCCTTCGAAATTGTGCCGTGTCCTGGAACACCTCGTAAGA GATGGCAGTGTAGATCACTCTCAATTCACACATGTGCGCCGATCGCCTCC ATGCACTGGGAAGAGCTCTCTGGCGCTGATGTAGGCACTGTCCGAACGGT ATGTGGTTCATTGTCTGGTGCTTCTTCATTCATCTTTGCGACATCCGCGC ATCATTCCGCAGGTATTCGAAGCAAGTTTGGCCAGATATGGTTCGCACGG GGTGAAGACCAGCGTCTTGTTCGCCCTCGTGTGGCTGTCCGATTGGGCGC TATGAGGGAAACCAATAACAGCAGTAGAGGGTGCGTAGCAGCAGGGCCGC CGGGTTAATACCAGAGAAACGGCGTTGTTGGTAAAAATAGTGTTTTTTTG TTTTTTTGTTTTTTTGTCGGCTCGGGGTGTGACCTACAGACCGTAGGATT ACGGTACTTTATATATTTAGTCGAAGACAAGACCGCAGCTGACGGTAAGC CGTGTTGTTTTGCCAGTGACGGCCCAAAGCGTCGAAATATCGCCAGCCGC CCCTCACCGCCCCCGGCTACAATGGTACAAATCCATGCTGTCTGCGGAGA GTTGGGAAGTATAGTACCCGGTAATCTGTTGCTTTATCTTCGCAGTGTAT TATTCCCTCTGTTTTGCCACAAGCGGAGATACCGTAGGCACGTCTTGTGT GAGGGCAACAACGGACAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5327:9392..12009-

>mRNA_L-elsbetiae_contig5327.13492.1 ID=mRNA_L-elsbetiae_contig5327.13492.1|Name=mRNA_L-elsbetiae_contig5327.13492.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2052bp|location=Sequence derived from alignment at L-elsbetiae_contig5327:9392..12009- (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGGTCGGGGCCGGGGCAGACATCGAGGCGGCAAACGATCAAGGGTC
GACCCCGCTGTACCTGGCTGCCACACGAGGGCACCGCGAGATTGTGGAAG
CGCTGATCGAGGCAGGCGCGAATGTCGACTGCCGTAGGGTGGGGGGAACA
ACACCACTGTATAGTGCGGCTGAGAGGGGACACGTTGGCATAGTGAAGTT
GCTTCTTCAAGCGAAAGCGTCACCGCTGTTGCCGAGCACGGACTCGTCGG
GTGCCACCTGGATCCCGCTGGACGCGGCGGTGGCAACGGGTCACCCGGAG
GTAGCATACGAGCTGATCCGGCAGCACGGGATCGATGGGTGTGGGGGCCC
GAGCCGCGGCGTGGATGCGCTTTGTTTGGCCGTTCAGTTCCAGCCAGACC
ACGACGTCCTGACCAAGTTGATGGATGCTGGAGTAGTCGATACAGGCGAA
GCGCTGCTCCGCGCCGCCGACTGTGGGCATGAAGCATCCATGAAGCTGTT
GTTGCAGCGCGCCACTGGTGGACGTGCGCACCTGAACAAGATCCGCAACC
CTGAAGGTGTAACCCCGTTACTCTTTGCCGCTGGCGTAGGCACGAATCCG
TCGCCCAGGATCGCGCGATTGCTGGTGGACGCCGGGGCCGACGTGTCCTC
CGTTGTTCAACTTATGAGGCAGGGGCGTGTGGTCGGACGCGACGTGCCTC
TGGGATACGCACTATTTTCTCTTCGCGTCAAAATGCTTGGAGGGCAAGGT
GCCACAGAGAAGCAGCTCCAGCGGCTGGAGGGCGCCCGCCGCTTGTTGAT
GAGGGTAGATGCGGTTTATGCAACATCTTGGCTGTGGATTAGCGACGCAC
CCCGCCCCCAGGTGGCTGCTGCTGCCGAGGGTGCAAATAAACCCACGACG
AAATCGACCTCTCTGACGGTAGTGTTGCCGATGTTGAGGCGAAGGGCTGC
AAAGCGTGGTATGCTCTTGGCAGCTCTGTTCAGATGCTGGTCGGGGCCGG
GGCAGACATCGAGGCGGCAAACGATCAAGGGTCGACCCCGCTGTACCTGG
CTGCCACACGAGGGCACCGCGAGATTGTGGAAGCGCTGATCGAGGCAGGC
GCGAATGTCGACTGCCGTAGGGTGGGGGGAACAACACCACTGTATAGTGC
GGCTGAGAGGGGACACGTTGGCATAGTGAAGTTGCTTCTTCAAGCGAAAG
CGTCACCGCTGTTGCCGAGCACGGACTCGTCGGGTGCCACCTGGATCCCG
CTGGACGCGGCGGTGGCAACGGGTCACCCGGAGGTAGCATACGAGCTGAT
CCGGCAGCACGGGATCGATGGGTGTGGGGGCCCGAGCCGCGGCGTGGATG
CGCTTTGTTTGGCCGTTCAGTTCCAGCCAGACCACGACGTCCTGACCAAG
TTGATGGATGCTGGAGTAGTCGATACAGGCGAAGCGCTGCTCCGCGCCGC
CGACTGTGGGCATGAAGCATCCATGAAGCTGTTGTTGCAGCGCGCCACTG
GTGGACGTGCGCACCTGAACAAGATCCGCAACCCTGAAGGTGTAACCCCG
TTACTCTTTGCCGCTGGCGTAGGCACGAATCCGTCGCCCAGGATCGCGCG
ATTGCTGGTGGACGCCGGGGCCGACGTGTCCTCCGTTGTTCAACTTATGA
GGCAGGGGCGTGTGGTCGGACGCGACGTGCCTCTGGGATACGCACTATTT
TCTCTTCGCGTCAAAATGCTTGGAGGGCAAGGTGCCACAGAGAAGCAGCT
CCAGCGGCTGGAGGGCGCCCGCCGCTTGTTGATGAGGGTAGATGCGGTTT
ATGCAACATCTTGGCTGTGGATTAGCGACGCACCCCGCCCCCAGGTGGCT
GCTGCTGCCGAGGGTGCAAATAAACCCACGACGAAATCGACCTCTCTGAC
GGTAGTGTTGCCGATGTTGAGGCGAAGGGCTGCAAAGCGTGGTATGCTCT
TGGCAGCTCTGTTCAGGTATTCGAAGCAAGTTTGGCCAGATATGGTTCGC
ACGGGGTGAGTATTCGAAGCAAGTTTGGCCAGATATGGTTCGCACGGGGT
GA
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