mRNA_L-elsbetiae_contig5327.13492.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 187 bits (476), Expect = 1.590e-49 Identity = 138/336 (41.07%), Postives = 188/336 (55.95%), Query Frame = 1 Query: 394 DIEAANDQGSTPLYLAATRGHREIVEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASPLLPST-DSSGATWIPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGEALLRAADCGHEASMKLLLQRATGGR-----AHLNKIRNPEGVTPLLFAAGVGTNPSPRIARLLVDAGADVSSVVQLMRQGRVVGRDV---PLGYALFSLR--VKMLGGQGATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTTKSTSLTVVLPMLRRRAAKRGMLLAALFRYSKQ 1368 ++ + G+TPLY AA +G+ + L KA PLL + D SG T++PLDAA GHPEV ELIRQ GIDGCGG S GV AL A QF+ + +++ L +AGVVDTG AL+ AA G E +K LL++A + A++N R+ GVTPLL+ + PR+ RLLV+AGAD +S V + Q + G DV PLG + +R VK++G A+ +QL +LE RRLL+RV+AV+A SWLW SD AAA G ++ T ST++T+ + + RRRA R + LAAL RYS + Sbjct: 140 NLNSRRSDGATPLYTAAWKGNVDAARLLLLA---------------------------------KADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFK-NLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNT-RDRGGVTPLLWGI---QHYRPRVVRLLVEAGADTTSPVAVRNQ--LGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTI-TRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSK 434
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 185 bits (470), Expect = 1.150e-48 Identity = 123/275 (44.73%), Postives = 168/275 (61.09%), Query Frame = 1 Query: 586 KASPLLPSTDSSGATWIPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAG-VVDTGEALLRAADCGHEASMKLLLQRATGGR-AHLNKIRNPEGVTPLLFAAGVGTNP--SPRIARLLVDAGADVSSVVQLMRQGRVVGR-----DVPLGYALFSLRVKMLGGQGATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTTKSTSLTVVL----PMLRRRAAKRGMLLAALFRYSKQV 1371 KA+PLL S G +++PL+ A G+P+VA E+IRQ GI GCGGPS GV+AL A + + + L+DAG VVDTG AL+ AA+ G ++K LL+R A++N R+P G TP++ A VG SP+I RLLVDAGA+ + V + R + R + PL + LR + G+ AT++QLQRL+ R LL R +AV+A SWLW S P P++A AA G K T ST++ L PMLRR+ RG+LL LFRYS++V Sbjct: 168 KANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAAD-EEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTR---ITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEP-PRIAQAA-GDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRKV 436
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 181 bits (460), Expect = 1.850e-47 Identity = 120/262 (45.80%), Postives = 155/262 (59.16%), Query Frame = 1 Query: 586 KASPLLPSTDS-SGATWIPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGEALLRAADCGHEASMKLLLQRATGGRA-HLNKIRNPEGVTPLLFAAGVGTNPSPRIARLLVDAGADVSSVVQLMRQGR-VVGRDVPLGYALFSLRVKMLGGQGATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAA-AAEGANKPTTKSTSLTVVLPMLRRRAAKRGML-LAALFR 1356 KA+ LL S + SGAT++PLD AV GH EV EL Q G+ GCGG S GV++L LA Q D D++ L GVVDTG AL+ AA+ E S+K LLQ GG A ++N +P G TPL+ + SPRIAR L+DA AD S V + + G+ RD PLG+A SLR +G + ATE+QL+ L+ RLL +VDAV+A SWLW S R A AA KPT L + +LR KRG++ L A++R Sbjct: 155 KANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQ-DVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGGAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVVLRAVYR 415
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 181 bits (458), Expect = 2.890e-47 Identity = 123/271 (45.39%), Postives = 163/271 (60.15%), Query Frame = 1 Query: 586 KASPLLP-STDSSGATWIPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVD-TGEALLRAADCGHEASMKLLL--QRATGGRAHLNKIRNPEGVTPLLFAAGVGTNP--SPRIARLLVDAGADVSSVVQLM-RQGRVVGRDVPLGYALFSLRVKMLGGQGATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTTKS---TSLTVVLPMLRRRAAKRGMLLAALFRYSKQ 1368 KA+PLL S++SSG +++PL+ A TG V EL+R+ GI CGGPS G+DAL +A + D+++ LMDAGVVD G ALL A G EA++ LL Q +++N R+ +G+T LL++ N +PRI R LVDAGAD +S VQL ++ R PL Y + G AT++QL RLE RR+L+RV AV+A SW+W SDAP A AN P T T LT VLP+LRRRA +R +L LFRYSK+ Sbjct: 141 KANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYG-QVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTSYVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPL-----LARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYSKK 405
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 176 bits (445), Expect = 4.080e-45 Identity = 107/240 (44.58%), Postives = 145/240 (60.42%), Query Frame = 1 Query: 661 GHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGEALLRAADCGHEASMKLLLQ-RATGGRAHLNKIRNPEGVTPLLFAAGVGTNPSPRIARLLVDAGADVSSVVQLMRQGR-VVGRDVPLGYALFSLRVKMLGGQGATEKQLQRLEGARRLLMRVDAVYATSWLW-ISDAPRPQVAAAAEGANKPTTKSTSLTVVLPMLRRRAAKRGMLLAALFRYSKQV 1371 GH EV ELI+Q G+ GCGG S GV++L LA Q D++ L GVVDTG AL+ AA+ E S+K LLQ +A GG ++N +P G TPL+ + SPRIAR L+D GAD S V + R G RD PLG+A SLR +GG+ ATE+QL+ L+ RLL +++AV+A SWLW SD P AA KPTT +L + +LR KRG++L A++R ++++ Sbjct: 191 GHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQY-VDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYRAAEEL 429
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 177 bits (450), Expect = 4.480e-45 Identity = 122/267 (45.69%), Postives = 159/267 (59.55%), Query Frame = 1 Query: 589 ASPLLPSTDSSG-ATWIPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGEALLRAADCGHEASMKLLLQRA--TGG----RAHLNKIRNPEGVTPLLFAAGVGTNPSPRIARLLVDAGADVSSVVQLMR-QGRVVGRDVPLGYALFSLRVKMLG-GQGATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTTKSTSLTVVLPMLRRRAAKRGMLLAALFRYS 1362 A+PLL T G T +PLD A GH +V ELI++ GI+GC S G AL A Q D++ L +AGVVDTG+AL AA GHEAS+K LL+ GG A+LN R+ G TPL+ + +PRI R+LVDAGAD +S VQ+M +G VV D PL + LR K++ G+ AT++ LQRLE RLL+RVDAV+A SWLW S AP + A E P +L ++LP+L+RR +R L+A L RYS Sbjct: 264 ANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQ-HLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNA-RDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPF--IGRATE--TDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYS 524
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 174 bits (441), Expect = 1.610e-44 Identity = 117/274 (42.70%), Postives = 164/274 (59.85%), Query Frame = 1 Query: 586 KASPLLPSTDSSGATW--IPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGEALLRAADCGHEASMKLLLQRATGG----RAHLNKIRNPEGVTPLLFAAGVGTNPS--PRIARLLVDAGADVSSVVQLMRQ-GRVVGRDVPLGYALFSLRVKMLGGQGATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTTKSTS---LTVVLPMLRRRAAKRGMLLAALFRYSKQV 1371 KA+PLL + + W +PLD A G V EL+++ GI GCGG + GV AL LA +P DV+ L AGVVDTG AL++A GH +K LLQ+ G A++++ R+P G TPL+ VG N S P++ RLLVDAGAD +S+V+ Q G + PL A +LR+K+ + ++ L+RLE RRLL+RV+AV+ATSWLW + PR + A A + + ST+ L VLP+LRRRA RG + A+L RY+ ++ Sbjct: 170 KANPLLTRVNLA---WQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAA-MKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVKL 439
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 168 bits (426), Expect = 1.470e-42 Identity = 116/266 (43.61%), Postives = 152/266 (57.14%), Query Frame = 1 Query: 595 PLLPSTDSSGATWIPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGEALLRAADCGHEASMKLLLQRATGGRAHLNKIRNPE---GVTPLLFAAGVGTNP-SPRIARLLVDAGADVSSVVQLMRQGRVVGRDVPLGYALFSLRVKMLGGQGATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTTKSTS---LTVVLPMLRRRAAKRGMLLAALFRYSKQV 1371 PLLP+ SSG T++PLD A GH VA EL+++ GI GC G S GVDAL A Q DV+ L DAGVVDTG AL+ G E ++K LL++ G A P G TPLL A V T P SPR+ RLLVDAGAD + V++ + PL A L K++ AT +QL+ L +RRLL++V+ V+ATSWLW A P AA G + T+ST+ L LP++ RR+A+RG L +FR +K+ Sbjct: 170 PLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQ-HLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPLLSA--VTTGPCSPRVVRLLVDAGADATLAVRVPDGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCP----AAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFRLAKKA 428
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 165 bits (417), Expect = 4.250e-41 Identity = 135/347 (38.90%), Postives = 178/347 (51.30%), Query Frame = 1 Query: 364 SCKMLVGAGADIEAANDQGSTPLYLAATRGHREIVEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASPLLP-STDSSGATWIPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGEALLRAADCGHEASMKLLLQRATGGR-----AHLNKIRNPEGVTPLLFAAGVGTNPSPRIARLLVDAGADVSSVVQLMRQ-GRVVGRDVPLGYALFSLRVKMLGGQGA---TEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTTKSTSLT-VVLPMLRRRAAKRGMLLAALFRYSKQV 1371 S L+ AG++I G+TPLY AA G+ V L KA PLL ++DS ++PLD A GH EV ELIRQ GIDGCGG S G +AL A F D++ L DAGVVDTG AL+ AA G EA +K LL++A G + A++N + N G+T LL PR+ +LLV+AGAD +S V + Q G PLG L + +LGG+ A T ++ +LE RRLL+R +AV+A SWLW SD P A A+G + T ST+ T ++ M+ RR R LLAAL RYS ++ Sbjct: 130 SVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLA---------------------------------KADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSR-LDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTL-NGVGLTSLLDGI---QRCRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLG-----LTMCLLGGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTI-THATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSSKL 432
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Match: A0A6H5JWZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ8_9PHAE) HSP 1 Score: 145 bits (367), Expect = 3.950e-35 Identity = 117/344 (34.01%), Postives = 174/344 (50.58%), Query Frame = 1 Query: 367 CKMLVGAGADIEAA-NDQGSTPLYLAATRGHREIVEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASPLLPSTDSSGATWIPLDAAVATGHPEVAYELIRQHGIDGCGGPSRGVDALCLAVQFQPDHDVLTKLMDAGVVDTGEALLRAADCGHEASMKLLLQRATGGRAHLNKIRNPEGVTPLLFAAGVGTNPSPRIARLLVDAGADVSSVVQLMRQGRVVGRDVPLGYALFSLRVKMLGGQGATEKQLQRLEGARRLLMRVDAVYATSWLWISDAPRPQVAAAAEGANKPTTKSTSLTVVLPMLRRRAAKRGMLLAALFRYSKQVW--PDMVR 1389 CKMLV AGA++EAA + GS P +LAA GH +++AL KA+ LL ++S +++PLDAA G V EL+ Q GIDGCGGPSRG AL A + Q D + L AG+VDTG AL+ A E S+K LL++++ NP P + G G PRI R++VDA AD +S V++++ G + ++ PLG A +L RLL+RV+A++A SWLW+SDAP +A AE + + + +LP+L + +R LL+A+ R++ ++ P+++R Sbjct: 45 CKMLVNAGAELEAATSSNGSRPRHLAADIGHAAVIKALRQAPISTAAGHVEAVRAFLRA---------------KANSLLIRLNASRDSFVPLDAAAGKGRSLVVRELLGQLGIDGCGGPSRGPHALYHAAKEQ-FVDTMAVLATAGMVDTGIALIGAIKENLEGSIKFLLRQSSCKG-------NPP--VPTIEDEG-GRWCFPRIVRMIVDAVADTTSAVRVLKLGLLPVKETPLGLA-------------------HKLSAVHRLLLRVEALHAASWLWVSDAP--DIAHTAEVTKRTKVIPPARSRMLPVLGL-STRRNALLSAVLRWAGRIGSGPELLR 340 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5327.13492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5327.13492.1 >prot_L-elsbetiae_contig5327.13492.1 ID=prot_L-elsbetiae_contig5327.13492.1|Name=mRNA_L-elsbetiae_contig5327.13492.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=342bp MLVGAGADIEAANDQGSTPLYLAATRGHREIVEALIEAGANVDCRRVGGTback to top mRNA from alignment at L-elsbetiae_contig5327:9392..12009- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5327.13492.1 ID=mRNA_L-elsbetiae_contig5327.13492.1|Name=mRNA_L-elsbetiae_contig5327.13492.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2618bp|location=Sequence derived from alignment at L-elsbetiae_contig5327:9392..12009- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5327:9392..12009- >mRNA_L-elsbetiae_contig5327.13492.1 ID=mRNA_L-elsbetiae_contig5327.13492.1|Name=mRNA_L-elsbetiae_contig5327.13492.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2052bp|location=Sequence derived from alignment at L-elsbetiae_contig5327:9392..12009- (Laminarionema elsbetiae ELsaHSoW15)back to top |