mRNA_L-elsbetiae_contig5323.13487.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5323.13487.1
Unique NamemRNA_L-elsbetiae_contig5323.13487.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5323.13487.1 vs. uniprot
Match: D7FM91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM91_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 1.740e-58
Identity = 207/417 (49.64%), Postives = 226/417 (54.20%), Query Frame = 1
Query:    1 QRSKMHEVEMDENKVVVHTRRGSTAVGVTPSDPSAIVDLFQEVESIGSTYIPEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENDSAAASGVPGPAHQXXXXXXXKKVGAATKLWGQQXXXXXXXXXXXXXXXXXXXXXXXQKMPVSSMTPSGPATFTPAAVLGAAVGGGDAAPRPYWPSKAATXXXXXXXXXXXXXXXXXXXAGDGGAVAVPGG------VSGEQGEEEAGRGW---GSAVFAG-LRGHGSSQSRRCTEQKTG-------PPAVPEPPPPNPGLPPSRGSSSALQATSMSESQQAPLRRKTSMGSFQKGMGESLTGRLRKQLDIPDAPKREIDTNIPIDQIQSLKYLAQV 1200
            QRSKMHEVEMDENKVV+HTRRGSTAVGVTPSDPSAIVDLFQEVESIGSTY+P DE    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                          ++ +AS +  PA                  WG                                                   GG   APRPYWP+                       +G+GGAV + GG       +G+ GE    R     GS+V  G  R HG+S  ++   Q+ G          VPEPPP  PGLPP RGSSSALQATS+SES QAPLRRKTSMGSFQKGMGESLTGRLRKQLDIPDAPKREIDTNIP+ QIQSLKYLAQV
Sbjct:   51 QRSKMHEVEMDENKVVMHTRRGSTAVGVTPSDPSAIVDLFQEVESIGSTYLPPDETDSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------NADSASSMVEPA------------------WGS--------------------------------------------------GGDPQAPRPYWPTDEEAAGVA---------------SGEGGAVVMLGGKEGGVEANGKSGEPRWSRRSIKIGSSVGCGEQRLHGNSHRQKTQSQQPGHHXXXXXXXXVPEPPPVRPGLPPPRGSSSALQATSVSESTQAPLRRKTSMGSFQKGMGESLTGRLRKQLDIPDAPKREIDTNIPVKQIQSLKYLAQV 342          
BLAST of mRNA_L-elsbetiae_contig5323.13487.1 vs. uniprot
Match: A0A6H5JJI7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI7_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 4.380e-50
Identity = 245/417 (58.75%), Postives = 264/417 (63.31%), Query Frame = 1
Query:    1 QRSKMHEVEMDENKVVVHTRRGSTAVGVTPSDPSAIVDLFQEVESIGSTYIPEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENDSAAASGVPGPAHQXXXXXXXKKVGAATKLWGQQXXXXXXXXXXXXXXXXXXXXXXXQKMPVSSMTPSGPATFTPAAVLGAAVG-GGDA-APRPYWPSKAATXXXXXXXXXXXXXXXXXXXAGDGGAVAVPGGVSG------EQGEEEAGRGWGSAVFAGLRGHGSSQSRRCTEQKTGPPA----------VPEPPPPNPGLPPSRGSSSALQATSMSESQQAPLRRKTSMGSFQKGMGESLTGRLRKQLDIPDAPKREIDTNIPIDQIQSLKYLAQ 1197
            QRSKMHEVEMDENKVV+HTRRGSTAVGVTPSDPSAIVDLFQEVESIGSTY+P DE    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                    +VG A KLW QQ XXXXXXXXXXXXXXX                     + +PA ++  A G GGD  AP+PYW                         +G+GGAV   GG  G      + GE             G+R   ++     +E ++  P           VPE P   PGLPP RGSSSALQATS+SES QAPLRRKTSMGSFQKGMGESLTGRLRKQLDIPDAPKREIDTNIP+ QIQSLKYLAQ
Sbjct:   51 QRSKMHEVEMDENKVVMHTRRGSTAVGVTPSDPSAIVDLFQEVESIGSTYLPPDETDSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQKH--------------------------------RVGVAGKLWAQQEXXXXXXXXXXXXXXX---------------------SDSPAQMVEPAWGSGGDPQAPKPYW--------------RPTDEEAAGVASGEGGAVVALGGTEGGGEANRKSGEPAGAEARLKLGLGGMRRAEAAWKLTSSETQSQQPGHHQEQAAAAGVPELPV-RPGLPPPRGSSSALQATSVSESAQAPLRRKTSMGSFQKGMGESLTGRLRKQLDIPDAPKREIDTNIPVKQIQSLKYLAQ 399          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5323.13487.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FM91_ECTSI1.740e-5849.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJI7_9PHAE4.380e-5058.75Protein kinase domain-containing protein n=1 Tax=E... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5323contigL-elsbetiae_contig5323:5659..11639 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size1224
Cds size1212
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5323.13487.1prot_L-elsbetiae_contig5323.13487.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5323 5671..11639 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816551.8505929-UTR-L-elsbetiae_contig5323:5658..56701622816551.8505929-UTR-L-elsbetiae_contig5323:5658..5670Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5323 5659..5670 +
1691683641.8119025-UTR-L-elsbetiae_contig5323:5658..56701691683641.8119025-UTR-L-elsbetiae_contig5323:5658..5670Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5323 5659..5670 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816551.86228-CDS-L-elsbetiae_contig5323:5670..57971622816551.86228-CDS-L-elsbetiae_contig5323:5670..5797Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5323 5671..5797 +
1691683641.8221695-CDS-L-elsbetiae_contig5323:5670..57971691683641.8221695-CDS-L-elsbetiae_contig5323:5670..5797Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5323 5671..5797 +
1622816551.8762243-CDS-L-elsbetiae_contig5323:7744..84561622816551.8762243-CDS-L-elsbetiae_contig5323:7744..8456Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5323 7745..8456 +
1691683641.8322914-CDS-L-elsbetiae_contig5323:7744..84561691683641.8322914-CDS-L-elsbetiae_contig5323:7744..8456Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5323 7745..8456 +
1622816551.8898478-CDS-L-elsbetiae_contig5323:9181..92421622816551.8898478-CDS-L-elsbetiae_contig5323:9181..9242Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5323 9182..9242 +
1691683641.8425746-CDS-L-elsbetiae_contig5323:9181..92421691683641.8425746-CDS-L-elsbetiae_contig5323:9181..9242Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5323 9182..9242 +
1622816551.9011042-CDS-L-elsbetiae_contig5323:10474..106361622816551.9011042-CDS-L-elsbetiae_contig5323:10474..10636Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5323 10475..10636 +
1691683641.8567894-CDS-L-elsbetiae_contig5323:10474..106361691683641.8567894-CDS-L-elsbetiae_contig5323:10474..10636Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5323 10475..10636 +
1622816551.9143212-CDS-L-elsbetiae_contig5323:11489..116391622816551.9143212-CDS-L-elsbetiae_contig5323:11489..11639Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5323 11490..11639 +
1691683641.8761747-CDS-L-elsbetiae_contig5323:11489..116391691683641.8761747-CDS-L-elsbetiae_contig5323:11489..11639Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5323 11490..11639 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5323.13487.1

>prot_L-elsbetiae_contig5323.13487.1 ID=prot_L-elsbetiae_contig5323.13487.1|Name=mRNA_L-elsbetiae_contig5323.13487.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=404bp
MHEVEMDENKVVVHTRRGSTAVGVTPSDPSAIVDLFQEVESIGSTYIPED
EDDSDSTTDDDGCDSSHDTAAASSGGGPAPASTPPSAPGSSSGAPGGAAS
GRQTSAESASTLGSTTHEQQQPAAAASSSPSSAGENDSAAASGVPGPAHQ
HQHQHQHKKVGAATKLWGQQQQQQQQQQQQQQQQQQQQQRPPPQKMPVSS
MTPSGPATFTPAAVLGAAVGGGDAAPRPYWPSKAATSTSAEAAAAAAVAA
AAVVSAGDGGAVAVPGGVSGEQGEEEAGRGWGSAVFAGLRGHGSSQSRRC
TEQKTGPPAVPEPPPPNPGLPPSRGSSSALQATSMSESQQAPLRRKTSMG
SFQKGMGESLTGRLRKQLDIPDAPKREIDTNIPIDQIQSLKYLAQVGGGQ
VGI*
back to top

mRNA from alignment at L-elsbetiae_contig5323:5659..11639+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5323.13487.1 ID=mRNA_L-elsbetiae_contig5323.13487.1|Name=mRNA_L-elsbetiae_contig5323.13487.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5981bp|location=Sequence derived from alignment at L-elsbetiae_contig5323:5659..11639+ (Laminarionema elsbetiae ELsaHSoW15)
CAGAGGAGCAAGATGCACGAGGTGGAGATGGATGAGAACAAGGTGGTGGT GCACACGCGGCGCGGGAGTACGGCCGTGGGCGTGACCCCCAGCGACCCGT CGGCGATCGTCGACCTCTTCCAAGAAGTGGAATCAATCGGTGAGCGAAAC TCACTAAATGACTACCGTGGGTGACACAAGATACCACACCCCCCGGACCG AATTTTGGGGCTGCATTACTCCGTAACGAAGAGAGTGCCAGTGCCGGAAG GGGTGGCGTTGGGAAGATCTGGTCGAGTTCTGTTCGAAAATCTGTCGTTT GGTGCTGGCGCCGTCTTCGTTACGGAGTAATGGAGCTCTAAAATTCGGTC CAGGGGGTGTGGTATCTTGTGTCACCTACGGTAGATCACGCACCTACGGG GATATACGTACCTATTTTAGCTTTGTGCATGGGAGGAATGACGACACCGA GAAGCTAGAGTACGGTCGAGTCGGCTGAAATGCTGTGTCTGTACGTATGG CGTTTGCGCCATGCCACGTATGTGTGCATGCCTTTCGTCTTCCTTGGCGG GCTCACATGCCTATTTTTTCGTTTTTTCCTCTTTATTGATGTTTTTTAAC CTTGTTGTTGTTGTCTTCACACATTAAAAACCATCCCGATCTCTCCACCC AGTACCTCCATCTGGCTTACATGCCTATTTTTTCGTTTTTTCCCCCCTTT TTGATGTTTTTTTAACCTTGTTGTTGCTGTTGTTGTTGTTGTCAGTCACA CATTAAAAACCATCCCGATCTCTCCACCCAGTACCTCCATCTGTCCGTAC TACTGTATTCCAAAACACTTGGCGCGGTCGATTCCCGTGGTCACAGGCTA TTGTAACTTACCCTAGAAAGTGTGTACTGAAAAATGAAAGTGGACCCGAA GGGTCAGCGAAAGCGCAAAAACAAAATGTCTGTATTGAAATGTACATACA TACGTACTTTTTGTACTACTGTCCAACCTGCATATATTAAACTAGCATCT TGACTTTTAAAGTCAAATCATGCGATGTGTTCCTATCATAGAAGTTGGTG ACAATATCACGACATCACGGAGGGTTTCTCCCCGGAATACATGTTGTTTG ACCTGGCAGAGAACTGCAGGGGAGATGTTGAATCTTCTAATATTTTAGGT GTTTTTCTACTCGGCCGGCCCATATTACGTCACTATATGGAATACCGAAA ATTCTCACGGGAGTCCCGTCTCCAATGTGGGTTAGGTTCCATTTTTGAAT ATCTGCTTATCTTTCAAAATACCAGACACAGATAGTCTGGAGCCCTCCGC CCCCTCTATACGCCATGTCAGGTAAAAACCAAAACTGGAACAGCCAACAT CACCAACCGAGAGATACACCCCCTGGTTATCTTGGTAGGCACCTCAACAA AGCCGGGGTGTTCCGTGCCGGGTTCTCGCCGGTCAGGCCCAATTTTCCCC CCTTGTTGCGTTTTTAACTAGTCTAAACTTCGACCTCACCGTCGACGATG GAAAGGGACAGCTGAACCCTCCTCGCGACAACACTCTTTGGCAAGCACCG CCGAACGTGGGAGTGAGGGCTTCGAGGAGAGGAACCCTTCTGTGTGACCA CGGTTCAGTACTCTGGCAAGGTGCATGCCCTCGTGGCAAGGAGCCCGTCA AGCACTGGAAATAAATGTGAAAAACAAAAGTTTACTAATAGACAGATACC CATGTAGAAGTATTTTATTAACCAATCTGCCAACCCCGAAGACCAAATGA CACGCCTCCAAGATGCTTTGCGCGTGTGTCGCCTGCACCCCCGCAACAGC ATAAGTACATACTATATGTGGATATACTTGTATAAATATACCAAAACGCT CGTGGTCCGAACTCGAGAAAGCCGAAGTCCGCAATCTGCACCACCACCAC CACCACTACTTCTGCTGCTGCCTGCAGCTCGCACCAAAGACCAACCCCCT GCAATATAAATATACCCTACAAAGTCGCTTCCTGTGCTCCGCCCGCCCAT CACGACCCTTCCTTCCCCTCCCCCCTGCCGCCGTCATACGTGCGTACGCC GCCCCTCGCCGTTTTTTTTTGCCGCGCCGGGTATAGGGAGCACCTATATC CCAGAGGACGAGGACGACTCGGATTCCACGACCGACGATGACGGCTGCGA CAGCAGCCACGACACAGCCGCCGCCAGCAGCGGCGGCGGCCCCGCGCCCG CTTCCACCCCACCCAGCGCACCCGGCAGCAGCAGCGGCGCTCCCGGCGGC GCCGCGAGCGGGCGGCAGACGAGCGCCGAGTCCGCGTCGACGCTGGGCTC CACGACCCACGAGCAGCAGCAACCAGCGGCAGCGGCTTCTTCTTCTCCTT CCTCCGCCGGCGAGAACGACAGCGCCGCGGCTTCTGGGGTACCAGGACCA GCGCACCAGCACCAGCACCAGCACCAGCACAAGAAAGTCGGAGCAGCGAC CAAGCTCTGGGGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCGGCCGCCGCCACAAAAGATGCCG GTCTCCTCGATGACGCCGTCGGGGCCCGCCACCTTTACCCCGGCCGCCGT GCTGGGAGCGGCGGTGGGGGGAGGAGACGCGGCGCCGCGGCCGTACTGGC CCTCCAAGGCGGCGACGTCGACGTCGGCGGAGGCAGCAGCGGCGGCGGCG GTGGCAGCGGCAGCTGTCGTTTCGGCGGGGGACGGGGGTGCCGTGGCTGT GCCGGGAGGCGTCAGTGGCGAGCAGGGAGAGGAGGAGGCGGGACGCGGGT GGCAGGCCGGGGGTGAAAACGAGGGGGTGAGTTACGCGGGTTTAAGGTAG AGATACTGCAGGGGGGGCTCATCGGTGCTGCCTTAAGTTTCGTTCTGGTG CGCGGTTGCGGCGTCGTTCCCGCCTCTCGGTGTTTTTTTTACCGCTTGTG TCGGGGGGCCGGCGGCGGCGTGCTGGGGCCAAACCAATCCCATGAAGCAG TCCTGAACACGAGTTACCGGCGTCTGTCTCTGTCTCCTTTTGGGATCAGC CGCGACAGCAAGACGCCGTTCGCTTGCTGCTGTTTTCCGGAAGCCGTTCG GGGGTGCCGTCCCTGCCGCCGTATTCGTACCCCTGTTCCTGCCAACGCGA CGTGTTGTGTTGCGTTGCGTGTGTGCGTGTCTCTCTGTGTGTGTGTGTGT TTGTGTTTGTTTTGTTTCGCTGCCGTCTAGTACGTTAAGAGTTTGGTTCT TCCGCCGCTCTCGGGGAATCAACTCCGCCGCACGAGACGGAGATACATAA GCCTGGAGCCTTTTTTTGAATGCCGTTTGCGCGTTTTGCGCGTTGCCAAC CCTGTTGTTTTGGTTGCTGCTGCTGCCACTGCTGCTGCTGCCGCTGCTGC TGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCGCTGCCGCTGCTGCCGCTG CTGCTGCTCGGCTGCGACTGACTGCTCGCAGAGAGGCGAGGCTGGTGGTG GTGGTGCGGAGGGCCGGATAAAGCTGGGGCTCGGCGGTGTTCGCCGGACT GAGGGGGCATGGAAGCTCACAGAGTCGGAGGTGTGTGTTCTCTTGTGTTG TCTTGTCTTAGTGTTGTCTTGTCTCAGTGTTGTCTTGTCGTAGTGTCGTC TTGTCTTAGTGTTGTCTTGCCTTAGTGTCGGGTGACGAGACCAAGTGAAG GAAAGGGCAAGTCCCGCTTTGGTCGATCGGCATGAGCGGGGTATAGCAGA TAGATGTATGCTGCCGCGCAGGCAGGGGCGGCGGCGGCGGCGGCTGGGAA GAGTGAGCGTAAAACATGATAGCGTGGGGTGGCGCGGCGCTCGTGTGTTT CGTTTTGAGTTTTCGCTGCTCTGTGTTTGTGTTGCTGGTGTGTATGTACG TACGTACCATGCATGCCCAAGAGTGCTGGCCAACCGCCTGCTGCAGTGCC CCCCCTGCTTCTGTTGGACTTGAAAATCTACACACCGCCGCCAAAAAGTT CGCCGCGAAGCAGCGCCGAAAGGAAGAAATACGATGACCAGGCTCTCATT AGCGCGGCGAACTCGCTGCTTTGTGTACTGCGTGCAGTGCGATGGGGACC AAGTGGTAACCTTGCTTTGCCTGCCGCATGTTCCAGAAGGTTAAGCGATA CAAAAGACACCGGGGGTTCTGTGTTTATTTTCTCTGTGTCGTGTTGTGGA CCGCCTGCGCCGGAAATTAAGTTTATCCAGGAAAATAACCCTAACCCTAA CCCTAACCCCAACCACCGACCCCCCTTTCCCTGTTTCCATATCATATGTT AGCTGAGATAAGTATGGAAACCCTGCGTAGACTACTGCACTGCTGGGCAC CTTTTTTTTTGTACATATGCCTTAAGGGGGTGCTGACAACGGTGGTTAAG CAGTTTCATACTAAAATCAAGATAATAAGGCCGAGATCGGTTGTGATCAC CCCCTTAATTGGCCTGCCTGCTTGCCTGCCTGCGGCGTGAAAGCCCGCCC GTCTAGGGGGTGTGGTGGCAGGGCAGGGCTTCCGAACGTGCCTTCCATAC ATCCCAGGGAGCCGTCCGTTACCCTCCACTGGGCTCGCCGTGTTGAGGAA TGTGGGATCCAGACCCGCCAAAAAACTTACCGGCATCCGTCCACACCGTC GTTTTTTGTGTTGTGTACCGCGTTGCATCGCTGGGTCTCGCTGGGCCTCG CTTATCGAACTAAAAGACCCCTTTCCACCCTCCCCCCTCCCCCTTCCCCT GTACCGTTTCCGACCCCCCCTCCCTCCTTCCGCCAAAATGTCCCCATGCC TGAACACCTCGTATAGACGGAACAAAAGACTGGTCCGCCGGCAGTCCCGG AGCCCCCACCCCCAAATCCCGGTCTGCCGCCCTCACGGGGCTCCTCCTCG GCCCTGCAAGCGACTTCCATGAGCGAGTCCCAGCAGGCCCCGCTGAGACG CAAGACTTCGATGGGGTCCTTCCAGAAGGTGAGTGAGCAGAGCGCCTGTT GTTTCGTTGTTTTCACGCCTGGCCTGTCTTCGTTTTTTGTTTGCGGGGAA AAGCAGAGGCCGAAGTAGAGAAAAAAAAGCGAGTGTTTCTGGATGTAAGG AGTATTTATCTTCGTTCATGCGTAGCAAGCGAGGGACTTGTGTCTCTGCT GTGCCGTGCTGCGCTGTGCTGCGCTGTGCTGCGCTGTGCTGCGCTGTGCT GCGCTGTGCTGCGCTGTGCTGCGCTGTGCTGCGCTGTGCTGCGCTGTGCT GCGCTGTGCTGCGCTGTGCTGCGCTGTGCTGTGCCGTGCTGCGCTGTGCT GCGATTTGGTCGGTTTGTCTGAGCTTGTTCTATTCGCCCTGCGTGTTTTT TTAACCCTCCTTCCAACACGATTTGTGATGTGCACGGAGCGGAGCGGCTT TGCTTGTTTTGTTGTGAGGAACACCACCTCGCAAGATTGTATCTTATGTA TATACCACTGTGTTCTCGGCGCTCGAGATTTCGGATGCACAAAAAGGCAG TCAAGGGGGTGGGTGTGATACATACAATGATGTAGCGCATCCGCCCTCCC TCCCTCCCGTTCCGTTCGTGTTCCCCCCCTCTCTTGTCCAAAAGCTCGGG GGTGCAAAGCATGAGTATTGGGTCGGAGGCAGCTGCGGCCTGAAACACGT CTCCCTCCCCTGTTTGTGTCCGCTCTCGTGTTCTGACCGCTGACACTCGA CAACCACGGTTATGTAAGCGTTACCAGCACGTCCGGTCCCTCCCCTGTGT GTGTTCGTTCTTTCTCTTGTTCTGACCGCTGACACTTGGCTACTGCTACG GTTATGTTTAAAACGTTGAATACCACCCCAGGGCATGGGGGAGAGCCTGA CCGGGCGGCTCCGCAAGCAGCTCGACATCCCGGACGCCCCCAAGCGGGAG ATCGACACCAACATACCCATCGACCAAATACAGAGCCTCAAGTACCTCGC ACAGGTGGGCGGTGGGCAGGTTGGGATCTAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5323:5659..11639+

>mRNA_L-elsbetiae_contig5323.13487.1 ID=mRNA_L-elsbetiae_contig5323.13487.1|Name=mRNA_L-elsbetiae_contig5323.13487.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2424bp|location=Sequence derived from alignment at L-elsbetiae_contig5323:5659..11639+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCACGAGGTGGAGATGGATGAGAACAAGGTGGTGGTGCACACGCGGCG
CGGGAGTACGGCCGTGGGCGTGACCCCCAGCGACCCGTCGGCGATCGTCG
ACCTCTTCCAAGAAGTGGAATCAATCGATGCACGAGGTGGAGATGGATGA
GAACAAGGTGGTGGTGCACACGCGGCGCGGGAGTACGGCCGTGGGCGTGA
CCCCCAGCGACCCGTCGGCGATCGTCGACCTCTTCCAAGAAGTGGAATCA
ATCGGGAGCACCTATATCCCAGAGGACGAGGACGACTCGGATTCCACGAC
CGACGATGACGGCTGCGACAGCAGCCACGACACAGCCGCCGCCAGCAGCG
GCGGCGGCCCCGCGCCCGCTTCCACCCCACCCAGCGCACCCGGCAGCAGC
AGCGGCGCTCCCGGCGGCGCCGCGAGCGGGCGGCAGACGAGCGCCGAGTC
CGCGTCGACGCTGGGCTCCACGACCCACGAGCAGCAGCAACCAGCGGCAG
CGGCTTCTTCTTCTCCTTCCTCCGCCGGCGAGAACGACAGCGCCGCGGCT
TCTGGGGTACCAGGACCAGCGCACCAGCACCAGCACCAGCACCAGCACAA
GAAAGTCGGAGCAGCGACCAAGCTCTGGGGGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCCG
CCGCCACAAAAGATGCCGGTCTCCTCGATGACGCCGTCGGGGCCCGCCAC
CTTTACCCCGGCCGCCGTGCTGGGAGCGGCGGTGGGGGGAGGAGACGCGG
CGCCGCGGCCGTACTGGCCCTCCAAGGCGGCGACGTCGACGTCGGCGGAG
GCAGCAGCGGCGGCGGCGGTGGCAGCGGCAGCTGTCGTTTCGGCGGGGGA
CGGGGGTGCCGTGGCTGTGCCGGGAGGCGTCAGTGGCGAGCAGGGAGAGG
AGGAGGCGGGACGCGGGGAGCACCTATATCCCAGAGGACGAGGACGACTC
GGATTCCACGACCGACGATGACGGCTGCGACAGCAGCCACGACACAGCCG
CCGCCAGCAGCGGCGGCGGCCCCGCGCCCGCTTCCACCCCACCCAGCGCA
CCCGGCAGCAGCAGCGGCGCTCCCGGCGGCGCCGCGAGCGGGCGGCAGAC
GAGCGCCGAGTCCGCGTCGACGCTGGGCTCCACGACCCACGAGCAGCAGC
AACCAGCGGCAGCGGCTTCTTCTTCTCCTTCCTCCGCCGGCGAGAACGAC
AGCGCCGCGGCTTCTGGGGTACCAGGACCAGCGCACCAGCACCAGCACCA
GCACCAGCACAAGAAAGTCGGAGCAGCGACCAAGCTCTGGGGGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCGGCCGCCGCCACAAAAGATGCCGGTCTCCTCGATGACGCCGTC
GGGGCCCGCCACCTTTACCCCGGCCGCCGTGCTGGGAGCGGCGGTGGGGG
GAGGAGACGCGGCGCCGCGGCCGTACTGGCCCTCCAAGGCGGCGACGTCG
ACGTCGGCGGAGGCAGCAGCGGCGGCGGCGGTGGCAGCGGCAGCTGTCGT
TTCGGCGGGGGACGGGGGTGCCGTGGCTGTGCCGGGAGGCGTCAGTGGCG
AGCAGGGAGAGGAGGAGGCGGGACGCGGCTGGGGCTCGGCGGTGTTCGCC
GGACTGAGGGGGCATGGAAGCTCACAGAGTCGGAGGTGTCTGGGGCTCGG
CGGTGTTCGCCGGACTGAGGGGGCATGGAAGCTCACAGAGTCGGAGGTGT
ACGGAACAAAAGACTGGTCCGCCGGCAGTCCCGGAGCCCCCACCCCCAAA
TCCCGGTCTGCCGCCCTCACGGGGCTCCTCCTCGGCCCTGCAAGCGACTT
CCATGAGCGAGTCCCAGCAGGCCCCGCTGAGACGCAAGACTTCGATGGGG
TCCTTCCAGAAGACGGAACAAAAGACTGGTCCGCCGGCAGTCCCGGAGCC
CCCACCCCCAAATCCCGGTCTGCCGCCCTCACGGGGCTCCTCCTCGGCCC
TGCAAGCGACTTCCATGAGCGAGTCCCAGCAGGCCCCGCTGAGACGCAAG
ACTTCGATGGGGTCCTTCCAGAAGGGCATGGGGGAGAGCCTGACCGGGCG
GCTCCGCAAGCAGCTCGACATCCCGGACGCCCCCAAGCGGGAGATCGACA
CCAACATACCCATCGACCAAATACAGAGCCTCAAGTACCTCGCACAGGTG
GGCGGTGGGCAGGTTGGGATCTAGGGCATGGGGGAGAGCCTGACCGGGCG
GCTCCGCAAGCAGCTCGACATCCCGGACGCCCCCAAGCGGGAGATCGACA
CCAACATACCCATCGACCAAATACAGAGCCTCAAGTACCTCGCACAGGTG
GGCGGTGGGCAGGTTGGGATCTAG
back to top