mRNA_L-elsbetiae_contig528.13417.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig528.13417.1 vs. uniprot
Match: D7G285_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G285_ECTSI) HSP 1 Score: 199 bits (507), Expect = 2.660e-50 Identity = 190/376 (50.53%), Postives = 229/376 (60.90%), Query Frame = 1 Query: 1 MVNPGMEQANQPPLPFPAQQGDGGRANGHHLPIPSSTAATVTNGGGEQRMVRLNQAVAEVVGDLEGMVHVWDKTRSAVDSSVDKNLRALSYSVAKSRVLGKIVDMGAEIIADPGTKKATRSSRRRGGHRPRST-----------PPPAAFPPSPSRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSAEAAGDAGFPCREDGEGAVTAAPPRPLPPPGAGGALAVTGFDLQAVLESRDIVEVKTHVRSLHHLAAQQELMLEELSSEGMCAIDLNHKLSLKLLDKVKELEVLKQAYFLALEADPAPL---SSFASDGAAT-------RPAAGAAFSSPS--PALEPVSSGTTPPXXXXXXXXXXXXXXXXXHSRVFSGV 1059 MVNP M+Q+NQPPLPFP NGHH PSS+A +TNG RM +NQ VA V GDLEG+VH WDKTR A+D +VD++LR ++YSVA++RV + D G EI+ D K++ +S R R RST PPP++ SRXXXXXXXXXXXXXXXXXXX + G+ ED +G L VTGFDL+A L+S I E + +R L+ LAAQQELML+E++ EGM AI+LN KLSLKL DK KE+EVLK+AYFLA+E DPA S ++GAA P AGAA S P P LE VSSG TP XXXXXXXXXXXXXX HSR FSG+ Sbjct: 1 MVNPAMDQSNQPPLPFPPXXXXX-HTNGHHASGPSSSA--ITNGDAGLRM-GVNQTVATVAGDLEGLVHAWDKTRGAMDFTVDESLRTVAYSVAENRVHTDLRDRGIEIVDDSRAKES-KSWRHSDRSRTRSTSSXXXXXXXXXPPPSSL----SRXXXXXXXXXXXXXXXXXXXF-----------SGGEIARHEEEDEDG------------------LQVTGFDLRAALKSESISETRRFLRVLYDLAAQQELMLDEMAREGMYAIELNDKLSLKLADKRKEVEVLKKAYFLAIETDPAAAWDTSDNNNNGAAKITAATTDSPGAGAAESLPGAEPTLEAVSSGMTPXXXXXXXXXXXXXXXRREHSRAFSGM 338 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig528.13417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig528.13417.1 >prot_L-elsbetiae_contig528.13417.1 ID=prot_L-elsbetiae_contig528.13417.1|Name=mRNA_L-elsbetiae_contig528.13417.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=804bp MVNPGMEQANQPPLPFPAQQGDGGRANGHHLPIPSSTAATVTNGGGEQRMback to top mRNA from alignment at L-elsbetiae_contig528:18311..27305- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig528.13417.1 ID=mRNA_L-elsbetiae_contig528.13417.1|Name=mRNA_L-elsbetiae_contig528.13417.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8995bp|location=Sequence derived from alignment at L-elsbetiae_contig528:18311..27305- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig528:18311..27305- >mRNA_L-elsbetiae_contig528.13417.1 ID=mRNA_L-elsbetiae_contig528.13417.1|Name=mRNA_L-elsbetiae_contig528.13417.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4824bp|location=Sequence derived from alignment at L-elsbetiae_contig528:18311..27305- (Laminarionema elsbetiae ELsaHSoW15)back to top |