mRNA_L-elsbetiae_contig528.13417.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig528.13417.1
Unique NamemRNA_L-elsbetiae_contig528.13417.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig528.13417.1 vs. uniprot
Match: D7G285_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G285_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 2.660e-50
Identity = 190/376 (50.53%), Postives = 229/376 (60.90%), Query Frame = 1
Query:    1 MVNPGMEQANQPPLPFPAQQGDGGRANGHHLPIPSSTAATVTNGGGEQRMVRLNQAVAEVVGDLEGMVHVWDKTRSAVDSSVDKNLRALSYSVAKSRVLGKIVDMGAEIIADPGTKKATRSSRRRGGHRPRST-----------PPPAAFPPSPSRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSAEAAGDAGFPCREDGEGAVTAAPPRPLPPPGAGGALAVTGFDLQAVLESRDIVEVKTHVRSLHHLAAQQELMLEELSSEGMCAIDLNHKLSLKLLDKVKELEVLKQAYFLALEADPAPL---SSFASDGAAT-------RPAAGAAFSSPS--PALEPVSSGTTPPXXXXXXXXXXXXXXXXXHSRVFSGV 1059
            MVNP M+Q+NQPPLPFP         NGHH   PSS+A  +TNG    RM  +NQ VA V GDLEG+VH WDKTR A+D +VD++LR ++YSVA++RV   + D G EI+ D   K++ +S R     R RST           PPP++     SRXXXXXXXXXXXXXXXXXXX            + G+      ED +G                  L VTGFDL+A L+S  I E +  +R L+ LAAQQELML+E++ EGM AI+LN KLSLKL DK KE+EVLK+AYFLA+E DPA     S   ++GAA         P AGAA S P   P LE VSSG TP XXXXXXXXXXXXXX   HSR FSG+
Sbjct:    1 MVNPAMDQSNQPPLPFPPXXXXX-HTNGHHASGPSSSA--ITNGDAGLRM-GVNQTVATVAGDLEGLVHAWDKTRGAMDFTVDESLRTVAYSVAENRVHTDLRDRGIEIVDDSRAKES-KSWRHSDRSRTRSTSSXXXXXXXXXPPPSSL----SRXXXXXXXXXXXXXXXXXXXF-----------SGGEIARHEEEDEDG------------------LQVTGFDLRAALKSESISETRRFLRVLYDLAAQQELMLDEMAREGMYAIELNDKLSLKLADKRKEVEVLKKAYFLAIETDPAAAWDTSDNNNNGAAKITAATTDSPGAGAAESLPGAEPTLEAVSSGMTPXXXXXXXXXXXXXXXRREHSRAFSGM 338          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig528.13417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G285_ECTSI2.660e-5050.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig528contigL-elsbetiae_contig528:18311..27305 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons9
Model size2412
Cds size2412
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816545.1155856-CDS-L-elsbetiae_contig528:18310..191801622816545.1155856-CDS-L-elsbetiae_contig528:18310..19180Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 18311..19180 -
1691683636.8298914-CDS-L-elsbetiae_contig528:18310..191801691683636.8298914-CDS-L-elsbetiae_contig528:18310..19180Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 18311..19180 -
1622816545.1258779-CDS-L-elsbetiae_contig528:20326..204111622816545.1258779-CDS-L-elsbetiae_contig528:20326..20411Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 20327..20411 -
1691683636.8417063-CDS-L-elsbetiae_contig528:20326..204111691683636.8417063-CDS-L-elsbetiae_contig528:20326..20411Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 20327..20411 -
1622816545.1368191-CDS-L-elsbetiae_contig528:20573..206561622816545.1368191-CDS-L-elsbetiae_contig528:20573..20656Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 20574..20656 -
1691683636.8527787-CDS-L-elsbetiae_contig528:20573..206561691683636.8527787-CDS-L-elsbetiae_contig528:20573..20656Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 20574..20656 -
1622816545.147721-CDS-L-elsbetiae_contig528:20971..215301622816545.147721-CDS-L-elsbetiae_contig528:20971..21530Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 20972..21530 -
1691683636.8627958-CDS-L-elsbetiae_contig528:20971..215301691683636.8627958-CDS-L-elsbetiae_contig528:20971..21530Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 20972..21530 -
1622816545.1580327-CDS-L-elsbetiae_contig528:22035..221331622816545.1580327-CDS-L-elsbetiae_contig528:22035..22133Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 22036..22133 -
1691683636.8786347-CDS-L-elsbetiae_contig528:22035..221331691683636.8786347-CDS-L-elsbetiae_contig528:22035..22133Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 22036..22133 -
1622816545.1691184-CDS-L-elsbetiae_contig528:22566..229141622816545.1691184-CDS-L-elsbetiae_contig528:22566..22914Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 22567..22914 -
1691683636.894306-CDS-L-elsbetiae_contig528:22566..229141691683636.894306-CDS-L-elsbetiae_contig528:22566..22914Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 22567..22914 -
1622816545.1842303-CDS-L-elsbetiae_contig528:23307..234541622816545.1842303-CDS-L-elsbetiae_contig528:23307..23454Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 23308..23454 -
1691683636.9088142-CDS-L-elsbetiae_contig528:23307..234541691683636.9088142-CDS-L-elsbetiae_contig528:23307..23454Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 23308..23454 -
1622816545.1976752-CDS-L-elsbetiae_contig528:26022..260851622816545.1976752-CDS-L-elsbetiae_contig528:26022..26085Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 26023..26085 -
1691683636.9206765-CDS-L-elsbetiae_contig528:26022..260851691683636.9206765-CDS-L-elsbetiae_contig528:26022..26085Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 26023..26085 -
1622816545.2098873-CDS-L-elsbetiae_contig528:27146..273051622816545.2098873-CDS-L-elsbetiae_contig528:27146..27305Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 27147..27305 -
1691683636.9297335-CDS-L-elsbetiae_contig528:27146..273051691683636.9297335-CDS-L-elsbetiae_contig528:27146..27305Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 27147..27305 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig528.13417.1prot_L-elsbetiae_contig528.13417.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig528 18311..27305 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig528.13417.1

>prot_L-elsbetiae_contig528.13417.1 ID=prot_L-elsbetiae_contig528.13417.1|Name=mRNA_L-elsbetiae_contig528.13417.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=804bp
MVNPGMEQANQPPLPFPAQQGDGGRANGHHLPIPSSTAATVTNGGGEQRM
VRLNQAVAEVVGDLEGMVHVWDKTRSAVDSSVDKNLRALSYSVAKSRVLG
KIVDMGAEIIADPGTKKATRSSRRRGGHRPRSTPPPAAFPPSPSRSPSRS
RSRSRSRSPSPSSSSCAAATAEGSAEAAGDAGFPCREDGEGAVTAAPPRP
LPPPGAGGALAVTGFDLQAVLESRDIVEVKTHVRSLHHLAAQQELMLEEL
SSEGMCAIDLNHKLSLKLLDKVKELEVLKQAYFLALEADPAPLSSFASDG
AATRPAAGAAFSSPSPALEPVSSGTTPPPQPRPPLSASAAAARREHSRVF
SGVGVAGGGGGWGKGAPGAGAGAREAGAANDAHEGGEEAGGHGRTRSGSG
VSTGSSASVRAELFPCAEEEKGRGQAGSPRKHGEGRAPLPPPQGPPRTAF
FPTQSAGPAQGSSGPPVMSGLPVMSGPPVMSGPPVMGGGVRGSNAGGALE
VPNEGNGVSEDPLQAMMMPAPQPQLHQRPPPAAPAAPANREAAATRDGPA
GGGNEDGASAPPLAPPPVLPHPGQPMSYRAVRKPPVGAGGAGFGGPRPKG
FGGGVGPFGGGVARPFGAVASSGNSQNGGDSEGGGGGGGGGGGGGGGGGG
GELAEATASTRGGGWGTMTSTTAGGGRSGTSYSSAGSFNGSFGSGHGGGG
GGGGGGGGGVGGVDVGTAPEVAAQQRPPQAAGSNDPGGGDGGGGSAEGEL
SGGGGGDGEGGEAAGALAAAGYPEGEQGNGGGGGGFASSPWSTEPESNTF
GGV*
back to top

mRNA from alignment at L-elsbetiae_contig528:18311..27305-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig528.13417.1 ID=mRNA_L-elsbetiae_contig528.13417.1|Name=mRNA_L-elsbetiae_contig528.13417.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8995bp|location=Sequence derived from alignment at L-elsbetiae_contig528:18311..27305- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTAAATCCTGGGATGGAGCAAGCGAACCAACCGCCTCTGCCGTTCCC GGCGCAACAGGGAGATGGTGGTCGCGCCAATGGCCACCACTTACCCATTC CATCCTCTACTGCTGCTACGGTCACCAACGGAGGTGGCGAGCAACGGATG GTACGTCTTGTATGTATTCTAGTGTCCATTTGTGAACAAATGTTCCTGCT GCGAACGTCGCAGGGTTCGCGGGAGGCGGGGCACACCTCCGCAAAAGAGA GCAGGGGCAGGGTTGTTTCTAGCACCCCAGGTTGGTGTCTCTCTGCCGCT CCCCTGTCTCTCATTCTAGGAAGAAACTCGAAAGCGACAATCACTTCTGG TTCTCTAACAGCGTGGAGTTTTCTCGCTTCGCTGATGAATGGTCGGTCGT CGGGTGATCGGTGATCCTCGCGTGGCAGTGGGCAAACCTCTTGCTGACTT GTGAGCAACGTGCGTATGTATGTATGTGTGTGTGTATGTGCATGTACGAC ACACACCGCGACTGAAAAAATACACCATCTTGGAAAAACCACTCGCCATC GAGGCGTCGTGCTCCCACCCGTGCATGGCGTACTCCGTTGAAACAGAACA AGCGGTACAAAGTCTGTAACGCATGTACTTCGGTATTTCATTACATATGT ATGCGTGGGTACCGTATACGACACAAGATAACACACCCCCTGTACCGATT TTCAAAGCTCAAGTTCTCCACAGCGAGGAGAGTGTCAGTCTCGAAAAGGG CGGCGTTGGAAGGATCTCATCAAGAGCTGTCTGAAAATGTGTCGTTTGAT ATTAGAATCATGCCCGTTGCGGAGTAACCGAGCTTTGAAAATCGGGCCAG GGGGTGTGTTATCTTGTGTCGTATACGGTTATCTATCTACTTCGTATTTG TATACACACACGAAGTGCACAGGTACATGCAGCAGCAGTAAGTAGGTGGC GAACAACGCACACCTGTGCGTTTTTTCGAAGAACAAGGGGCTGGTTATGT ATCGAGGGCAAGGATTGGCCGTCAGTCCCGTCCAGCTCTGCGCGTTCTCG AACCACGATGCCTAATCTTCCGATATTCGTTGTTGTTTCTCTCTTACATT TCTGTCGGTGTCTCTGTCTTCCTGCCTGTCTGCCTCTCTCTCTCCCTCTT TCTCTCTCTTTCTATCTTCCGACGACTTGATGGTCCGTCCGCGTTGCGTG CACGGCGGTGGCTGGGCCAGAACCAGGCGGTAGCGGAAGTGGTGGGTGAT CTGGAGGGGATGGTGCACGTCTGGGACAAGACGGTGAGCCGTCCGCCGTT AGTTTCGCTCGGGCACACACACACACACCCTCCGCTGTGAAAGCGCTGAG AACCAACACGTCGCGAAGCAGGGACTGCGAATGCGGTTCAAGTCACGCCT TCGGTTGAGAGAAGAAAAAATGCCCTAACAAATACCGCTACATATTTGTG TACTTGGAGTTTGTAGTCTAGTAGACGGGCGGGTAATGGCTGTGCCGTTT ACCAGCAGCTGCTCAATACCTTGCAGTATGTAGCCGGTCGCCCCGGTGGT CTAGTTGGTATCCACATAACTTCTAAGAACCAGGTCCTGGGTTCGAGCCC CTGCAAAGCGAGTGTTTTTTCTCACATTCGTTCCTGGAAAATAGAAAGCG ATTTCGTTAGTGAGTATTACTTCGACTTTCATTGTTGACGAGGGTGGGGA GTTTTGAACCCTGCTTGCGATAAAAGCATCTAAGGCAGGTACGGCTAGAG GGTGTCCAACCCCCCCTCCTGTGTTACCCCATTTGGGTCGTCTAGCTAGT CGTAGCGGAGGAAGGGGGCCAGTGGAGTAGACGACAAATATTCCAATAGT GGAAGGAAAACATAAAAATGTAGTCTCTGCGAAGCTGTGCGATAAGCGTA GTACGGCAGCAGTGCACCGAGCGTGTTGATGTCCTCTGTACATGGAATTC GTTTTTTTAGTGAGTGCACCGATTGATATGTGGTGTATGACACGGCCATT TTGTTTTTCACACGTTCACGCGTTCACAGACAGGACAGCAGTTGTTTTTC GAATATTTTTGTCTAGTCTAGATATTTTTCCCTCCACCCTGCATCACGCA CTACACCCCTTGCTTTATGCAACACCACCATGCACCCTCACACTAATCTG CCGCCGCCCTGCCGCGAGGCAGGCACCCCTGCTTCTTTTCAGCCATGCCA CACACGCGCGGAAACAAGACGACAGGCGACAGACGCATGCTCATCAGTTT ACCAATCAAATCACACAATTCAGCCTAGTGCAGACTTCATATATTCGCGC ATTCCATCCATATGGTGTTCCGACAAAAATAACCTTCTGGTATTTTAGGT TGTTTTTCTGCTCGCTCCGCCAAATATTACGTCTCTGTATGGAATACCGT TTGAACCCCATATCGAGTCCTTGCTCTAGTATGGGGCAGGTTCCATCTTT GATTCATTGTTTATTTTTAAAAAGAAGAGATACGATGTATGGATGTGTGA TGCTGTTCTCCCCCCCGCCAGTGGTGCTTCAAGTCCCCCCTGTGTTGTCG TTGCTTTGATGTGTTGACGGAGGTCTGCTTATCCAGAGCTGCATTCCTTG CTCAGTAAGTATATCTACAAGGTCTGTTATGACGTCATCACCCGTGGCCC GCCCGTCTTGTCAATTTCCACGCCGCGGCCATACATATGTGCGTGCAAGG CGCCGACTTTTACCCTGCGAGCAAACCCATGCGTGCCCTTTCTCCCGCTG GGGGTGTCTCCCTCCCTCCTCCCGGCGCTGTTGCTGTCTGAGCTGTGTGT GTGCCCACTGTTCAGTGTCTCGTTGGCTATTTCTTATCGGGAGCGCTGCT CTTGACCGGCGTGACGGACAGAACAATCAGAGTGCCCTTACTTCCTTGCC TCTCGGGAAACAAAAAGCAAACAGGTCGTCGGTTTGGTAGGTTTTTGCTC AGGCCGGAAGGACCTGATGGTCACCAGCCAAATGAAGGCGCCCCCCATCG CGGTCTTAAGAGGCTGGCTGGTATGGAGAGCTTATTTTCCCCCTCGGAAT CCAAGGCCAAGAACAAAAAAGGTCCGCGCGCGGCTTGTCCGCGGCTCATC ACAGTCAGTACAACAGTCCACCAACAAGGCTGGCTTGGATTTACCGTACA TAGGTGACACAAGATACCACACCCCCTGGACAGATCTTCAAAGCTCGATT CCTCCCCAGCAAGAAGAGTTCCAGTGCCGAAAGCGGTTGGGGTTGGAAAT ATCTAGTCGAGGGCTGTCCGAAAGTGTGTCGTTTGGTGCTGGCACCCTCT TCGAGCAATGGAGCTCTAAAACTCGGTCCCGGGGGGGGGGTGGTATCTTG TGTCGCGTACGGTATTTTGGCGGCAGACAAGACCCTTCAGGGCATGAAGG TCGTCTCGTCGTCCATCCTGGGTTTCGGTTTTAGCTCCCCATTGCCCACC CACACGCGCAACATTATGATGATGTGCAAAAAAAAGTTGTACATACCCTC CATCCTCCCACGAGTACAGCAGTCCGATACACAAGATGACAACAATGTTG TCTTGTTTGAGCCTGCTGATACTATGTAGCAGGAGAGCTATCACTGTACC TGTGCCCAGGATAGACACAGCACACTGGTAGAAAGAAAAAACATACCACT GCGGTAACTACGCAGCGACCAAAATAGTGCGCTGCTTCTAAATTTTCTCG GACTCTCGTCCGAGCGCGCTGGTAAACGTGTGAGCATCCTCAAGACAAAA CATCAAAAATAAAAACAGAGCATTTCGACGCCCCAAGCACATGTACCACC CACGCCCACCCACACTCATCTACACCCACCCACCGCCACCACCACCCTCA GAGATCAGCGGTGGACAGCTCCGTGGACAAAAACCTCCGCGCTTTGTCGT ACAGCGTCGCCAAGAGCAGGGTTCTCGGCAAAATCGTGGACATGGGCGCG GAGATCATTGCTGATCCCGGTACCAAGAAGGCGACAAGGTCATCTCGGGT AAGGGGCCTCGCAAGTCTAGAAGTGGTGGGCTCGTTGGGGGGGGGGGGGG GGGGGGGATTTTCCTCCACGTCGTACGGAACATGGCTACCTTTTTTTAAT AACGAGGTGTGTGTTGTTTATGTATGCACGTTACCGTTTTTCCACGGCCC GTCACGTGTATTTCACCACCACGCCTCAGAGTTGCCACATCTTGGAGAGC CATTCGCGGCACTGCTGTTGATGCAAGCAAGCAGGATATACGAAGTATAC ATTCCTTGTCCCTCTTTCCTCCTGCTCTTCCACCTCCTCCACCTCGTCCT CGTCCCCGTCCTCCTCCTCCTCCGAAACGCACTAAACCGCTTCGCGTTTG TTTCCCTCCCCGTGCTTGGTCGCGTTGCCCCACCCGGCCAGCGTCGAGGT GGACACAGGCCGAGGTCGACGCCACCACCGGCGGCGTTTCCGCCGTCGCC GTCGCGATCGCCGTCCCGTTCGCGGTCGCGGTCGCGGTCGCGATCGCCGT CGCCGTCCTCTTCCTCCTGCGCCGCTGCCACGGCCGAGGGATCGGCGGAA GCAGCGGGGGACGCGGGGTTCCCCTGCCGCGAGGACGGGGAGGGAGCGGT CACGGCGGCGCCGCCGCGGCCGCTGCCGCCACCCGGGGCCGGCGGCGCGC TGGCTGTGACCGGGTTTGATCTGCAAGCGGTGCTGGAGAGCAGGGACATC GTCGAGGTTAAGACGCACGTGCGATCCCTGCATCATCTGGTGAGAAGGAG GGGGGGGGATGGCAGCAGGGGTTAGGGGACCACGTGTGCTTGAGCGACGC CCTTCCCCTTCGAGGGTTTTGCTTTATCGCCACGCTCTCGCCCGCCCGCC GCCCAGGAGAGCTTTGCAACTGAGGCGAGGCGAGGCTGAGGGGGGCTGTT GCCCCGTTTTTGTCAAGAGACTTGGGGTGCGAACGCATACACAGACACAC GAACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATACAAGAGAGGGAGA GAAAGGGAGATGCCGTTGATGCCGCTTCCGCGCGGCACGCTTGCTTGGCG CCATGCTGCCATGCTGCGCCGACGTCGCTGCCGCCAACCCTCCCGCGCTG GCTCTCCTGCGACGTGTTCCGCACCCTCCGCGTGTGTGTTGTCGGCATCC TTTCCCGCTTCGTTGGTCTCAGGCTGCTCAGCAAGAGCTGATGCTTGAGG AGCTCAGCTCGGAGGGCATGTGCGCCATTGACCTCAACCACAAGCTTTCG CTGAAGCTTCTCGACAAGGTGTGGTTTGTGGCAGGCGGGGGGGGGGTTGG GTCTGGTTGGAGGCGTGATGTTTTGTGTATGGTCGCATGATAATGGTACC CGGAATGAGGATGTCGACCAAAGTTTCATGAGGGCCGGTATTAACTGCTT CTCAACTTCCCTGTTGCTACGAGCGCAATGAACCGGTTCGCAAGCCCGTG TCGCTAAAGTCAGAGTGGGTGGAAAGTTCTCAACGGGACGAGAGTTTCGC GCGGGACGGAACGGGAGACCAAAAAAAAAATTTTCAAGCGTGTTCTCAAT TCAAACCTTTTGCCGGAAGTCATGGAAAAAGCGCAGAGGTGTTCGGGCTT ACACAAGCCGAAGCAGGACGGTCGAGCTATCCGGGCTCGCGCACGGTGGC CACTGCCGGCAGGTCACGTTTCCTGTCAAGCAGGCGATTCAAAACCTAGT CCGTCACTCTGTCTTCCCGTCCCGCCGCCGCCGCCGCCGCCGCCCCCCCC CCGCCCCCCTCTTTGAAAAACAGAGCAAAGAGCTGGAGGTTCTGAAGCAG GCCTACTTCCTGGCGCTCGAGGCCGACCCCGCTCCTCTCTCGTCTTTCGC GAGCGACGGCGCCGCGACCAGGCCCGCCGCCGGCGCGGCTTTCTCCTCTC CGTCTCCTGCCCTGGAGCCGGTGTCCTCGGGGACGACGCCGCCCCCGCAG CCCCGCCCCCCGCTCTCGGCCTCGGCCGCCGCGGCCAGGCGGGAACACTC GAGAGTTTTTTCCGGGGTAGGCGTTGCCGGCGGCGGGGGTGGGTGGGGGA AGGGCGCCCCCGGCGCCGGCGCCGGCGCCAGGGAAGCGGGGGCAGCAAAC GATGCCCACGAGGGCGGGGAGGAGGCCGGCGGCCACGGCCGCACCCGTTC GGGCAGCGGCGTCAGCACTGGTAGCAGTGCCAGCGTGCGAGCGGAGCTAT TTCCGTGCGCCGAGGAGGAGAAGGGACGGGGGCAGGCGGGGTCGCCACGG AAGCACGGCGAAGGCCGGGCACCGCTGCCGCCGCCGCAGGGGCCGCCGCG TACCGCGTTCTTCCCTACGCAGTCGGCGGGCCCGGTGGGTGGGGCAGCGT GCGCGGAAGAGGGCGGAAGAGCCCTTGACGACGGTGGCGCCGTCTCCACC GCGGATAGCAACGCCGGGGCTTTCGGCGTCGCCGTTATTCCAGCGGCCGG CAGCGCCGCCACCACGCCGAGAAGTCACCCCACCCCGCGGCAAGGTTTGT CGGCGCCGCCAACGGCGGCGGGAGGCGAGGATGTAGAAGATAGCGGTGCG TTTGAGGGGTCCGACCGGGGGGTGGCGGTCAGCAGCGCGGGCGGCAGCGC AGCAACCACCCCGAGGAAGCACCCTTTTCAGGGCCAGCTCGCGCCCGAGG CGCAAGGCTCGTCGGGGCCGCCCGTGATGTCGGGGCTGCCGGTGATGTCG GGGCCACCCGTGATGTCGGGTCCGCCCGTGATGTCGGGGCCGCCGGTGAT GTCGGGGCCGCCGGCGATGTCGGGGCCGCCCGTGATGTCGGGGCCGCCGG TGATGTCGGGGCCGCCGATGATGTCGGGGCCGCCGGTGATGTCGGGGCCA CCCGTGAAGTCGGGGGCGCCGGAAGACGCGACCGGGTGGATGAGGGGGGG CGGGGTGAGAGGGAGCAACGCTGGTGGTGCATTGGAAGTGCCCAACGAGG GGAATGGAGTCAGCGAAGATCCGTTGCAGGTATGCGTGTGTGCCGGTTTT CTATCGGTTGCGTTCTTCGCCAGCTCAGCAGCTATGATGGCGTGTGCAGT GCAGCCTCGTCGCCTAAGCTTTTTTGTGTCTGTTTTGCTTTTGATGCTGG ATATGAAGAGGGCCAAACCCGCGAAAGGAGAGTGGGTCACGGCCGCGCCG GACATCGGGCAACTCTTACGCTTTTGGTGTTTTCTGGGTTGGGTTGTGTT GTGTTGTGGATCTTTGTTAGGTCCGTACACAACAATATGTCCAATCGCTT TTTCTGCGATAACTTTTGTCGGAAACATATTTGGAACTTGAAACAACGAT TTTCGTGACCGCCTCGTCGGGATAAATCGATATGGAGCTTGAGAGTTTTT TTCACATTTCAGAAATTGAGCTATTTTCGACCGAATATGTCCCCACGGAG CTCTCTTTTTCACCACAGAGCCCCCTCCAACGCCACGAAGCCCCGTAGAC ATTATGCTGCACCCCCAAACAACACGGGAAAAAGATTGCGAAACAAAATG TGGAATATCTCAAGAACAAGAGTTTTCCGGGAGACAAAAAAAATGGCCTG GAAATTGATGAGAGGAATCGTTTGCCGGTGCTTAATTTATAATGGGTTTG TCGGATATCTCATATAAAAGATTACAAGTTGACCCTCGAAGTCCGTTTTT TCCCCGATACCTTCCGTCAAATATAATTATTTCAATAATTAAACACGGTG GGGCAAATTCCGAGATCTGCTGAAATCCATTGAGATATTTGGAACTGACC AACACCACCTCTTGGGGAAAATAATACGAGTTTTCCCGGTCGTTTTCTAA TAAAAAGTAACGGAATAAAAAAAAAAACCTTCGTGAGACGCGCCTAAAGA CAGCGCGTTCGCCAGTACTTTCGGATATCGGAACAGCCATCTTTGTACCA AGAGAATGCACCTGGGTGCTGGGGATATTTTTGGACAAATTGTTGTGCAC GGACCATATGTGGGACTATCCTCCGCTTTGGTACGTTGTATCCCGTCCAT TGCGGGAGGTCTCTTGTCCGCGCCTCTTTTCCCCTGCAAGACTATTTCGC TCCCTCTCTCTCCCATGCTCAGCTTTTTCTCGTGTCCCCGTGTTTTGTCC CGTTTTGCTCACCGGCACTTGCAAGGCGATGATGATGCCGGCGCCACAGC CGCAGCTGCACCAGCGCCCGCCGCCCGCAGCGCCAGCAGCGCCCGCCAAC CGAGAAGCGGCGGCAACAAGAGACGGCCCCGCGGGCGGCGGCAACGAGGA CGGCGCCAGCGCCCCGCCGCTCGCTCCGCCCCCAGTCCTGCCCCACCCGG GCCAACCGATGTCTTACCGCGCGGTGAGGAAGCCCCCCGTGGGTGCCGGG GGTGCCGGCTTTGGTGGCCCTCGACCGAAGGGCTTCGGGGGAGGGGTGGG ACCGTTCGGTGGAGGTGTGGCACGGCCATTTGGCGCGGTCGCCAGCAGCG GCAACAGCCAGAACGGCGGCGATAGCGAGGGCGGCGGCGGCGGTGGAGGC GGCGGCGGCGGCGGCGGCGGCGGTGGGGGAGGGGGCGAGTTAGCGGAGGC GACGGCATCGACGAGAGGGGGCGGCTGGGGTACCATGACCTCGACCACCG CCGGGGGCGGGCGCAGCGGTACCAGCTACAGCAGCGCCGGATCGTTCAAC GGGAGTTTTGGGAGCGGCCACGGCGGCGGCGGCGGCGGCGGCGGCGGCGG CGGCGGCGGCGTCGGTGGTGTCGACGTAGGCACCGCGCCGGAGGTGGCCG CTCAGCAACGGCCGCCGCAGGCCGCAGGGAGCAACGACCCCGGCGGCGGT GACGGCGGCGGAGGCAGTGCAGAGGGAGAGCTCTCTGGTGGGGGTGGCGG AGATGGCGAGGGAGGGGAGGCGGCGGGGGCGCTGGCGGCGGCGGGATACC CCGAAGGCGAACAGGGCAACGGTGGCGGTGGGGGAGGGTTTGCCTCGTCG CCATGGTCTACGGAGCCAGAGTCGAACACGTTCGGTGGTGTTTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig528:18311..27305-

>mRNA_L-elsbetiae_contig528.13417.1 ID=mRNA_L-elsbetiae_contig528.13417.1|Name=mRNA_L-elsbetiae_contig528.13417.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4824bp|location=Sequence derived from alignment at L-elsbetiae_contig528:18311..27305- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTAAATCCTGGGATGGAGCAAGCGAACCAACCGCCTCTGCCGTTCCC
GGCGCAACAGGGAGATGGTGGTCGCGCCAATGGCCACCACTTACCCATTC
CATCCTCTACTGCTGCTACGGTCACCAACGGAGGTGGCGAGCAACGGATG
GTACGTCTTATGGTAAATCCTGGGATGGAGCAAGCGAACCAACCGCCTCT
GCCGTTCCCGGCGCAACAGGGAGATGGTGGTCGCGCCAATGGCCACCACT
TACCCATTCCATCCTCTACTGCTGCTACGGTCACCAACGGAGGTGGCGAG
CAACGGATGGTACGTCTTAACCAGGCGGTAGCGGAAGTGGTGGGTGATCT
GGAGGGGATGGTGCACGTCTGGGACAAGACGAACCAGGCGGTAGCGGAAG
TGGTGGGTGATCTGGAGGGGATGGTGCACGTCTGGGACAAGACGAGATCA
GCGGTGGACAGCTCCGTGGACAAAAACCTCCGCGCTTTGTCGTACAGCGT
CGCCAAGAGCAGGGTTCTCGGCAAAATCGTGGACATGGGCGCGGAGATCA
TTGCTGATCCCGGTACCAAGAAGGCGACAAGGTCATCTCGGAGATCAGCG
GTGGACAGCTCCGTGGACAAAAACCTCCGCGCTTTGTCGTACAGCGTCGC
CAAGAGCAGGGTTCTCGGCAAAATCGTGGACATGGGCGCGGAGATCATTG
CTGATCCCGGTACCAAGAAGGCGACAAGGTCATCTCGGCGTCGAGGTGGA
CACAGGCCGAGGTCGACGCCACCACCGGCGGCGTTTCCGCCGTCGCCGTC
GCGATCGCCGTCCCGTTCGCGGTCGCGGTCGCGGTCGCGATCGCCGTCGC
CGTCCTCTTCCTCCTGCGCCGCTGCCACGGCCGAGGGATCGGCGGAAGCA
GCGGGGGACGCGGGGTTCCCCTGCCGCGAGGACGGGGAGGGAGCGGTCAC
GGCGGCGCCGCCGCGGCCGCTGCCGCCACCCGGGGCCGGCGGCGCGCTGG
CTGTGACCGGGTTTGATCTGCAAGCGGTGCTGGAGAGCAGGGACATCGTC
GAGGTTAAGACGCACGTGCGATCCCTGCATCATCTGCGTCGAGGTGGACA
CAGGCCGAGGTCGACGCCACCACCGGCGGCGTTTCCGCCGTCGCCGTCGC
GATCGCCGTCCCGTTCGCGGTCGCGGTCGCGGTCGCGATCGCCGTCGCCG
TCCTCTTCCTCCTGCGCCGCTGCCACGGCCGAGGGATCGGCGGAAGCAGC
GGGGGACGCGGGGTTCCCCTGCCGCGAGGACGGGGAGGGAGCGGTCACGG
CGGCGCCGCCGCGGCCGCTGCCGCCACCCGGGGCCGGCGGCGCGCTGGCT
GTGACCGGGTTTGATCTGCAAGCGGTGCTGGAGAGCAGGGACATCGTCGA
GGTTAAGACGCACGTGCGATCCCTGCATCATCTGGCTGCTCAGCAAGAGC
TGATGCTTGAGGAGCTCAGCTCGGAGGGCATGTGCGCCATTGACCTCAAC
CACAAGCTTTCGCTGAAGCTTCTCGACAAGGTGCTGCTCAGCAAGAGCTG
ATGCTTGAGGAGCTCAGCTCGGAGGGCATGTGCGCCATTGACCTCAACCA
CAAGCTTTCGCTGAAGCTTCTCGACAAGGTCAAAGAGCTGGAGGTTCTGA
AGCAGGCCTACTTCCTGGCGCTCGAGGCCGACCCCGCTCCTCTCTCGTCT
TTCGCGAGCGACGGCGCCGCGACCAGGCCCGCCGCCGGCGCGGCTTTCTC
CTCTCCGTCTCCTGCCCTGGAGCCGGTGTCCTCGGGGACGACGCCGCCCC
CGCAGCCCCGCCCCCCGCTCTCGGCCTCGGCCGCCGCGGCCAGGCGGGAA
CACTCGAGAGTTTTTTCCGGGGTAGGCGTTGCCGGCGGCGGGGGTGGGTG
GGGGAAGGGCGCCCCCGGCGCCGGCGCCGGCGCCAGGGAAGCGGGGGCAG
CAAACGATGCCCACGAGGGCGGGGAGGAGGCCGGCGGCCACGGCCGCACC
CGTTCGGGCAGCGGCGTCAGCACTGGTAGCAGTGCCAGCGTGCGAGCGGA
GCTATTTCCGTGCGCCGAGGAGGAGAAGGGACGGGGGCAGGCGGGGTCGC
CACGGAAGCACGGCGAAGGCCGGGCACCGCTGCCGCCGCCGCAGGGGCCG
CCGCGTACCGCGTTCTTCCCTACGCAGTCGGCGGGCCCGCAAAGAGCTGG
AGGTTCTGAAGCAGGCCTACTTCCTGGCGCTCGAGGCCGACCCCGCTCCT
CTCTCGTCTTTCGCGAGCGACGGCGCCGCGACCAGGCCCGCCGCCGGCGC
GGCTTTCTCCTCTCCGTCTCCTGCCCTGGAGCCGGTGTCCTCGGGGACGA
CGCCGCCCCCGCAGCCCCGCCCCCCGCTCTCGGCCTCGGCCGCCGCGGCC
AGGCGGGAACACTCGAGAGTTTTTTCCGGGGTAGGCGTTGCCGGCGGCGG
GGGTGGGTGGGGGAAGGGCGCCCCCGGCGCCGGCGCCGGCGCCAGGGAAG
CGGGGGCAGCAAACGATGCCCACGAGGGCGGGGAGGAGGCCGGCGGCCAC
GGCCGCACCCGTTCGGGCAGCGGCGTCAGCACTGGTAGCAGTGCCAGCGT
GCGAGCGGAGCTATTTCCGTGCGCCGAGGAGGAGAAGGGACGGGGGCAGG
CGGGGTCGCCACGGAAGCACGGCGAAGGCCGGGCACCGCTGCCGCCGCCG
CAGGGGCCGCCGCGTACCGCGTTCTTCCCTACGCAGTCGGCGGGCCCGGC
GCAAGGCTCGTCGGGGCCGCCCGTGATGTCGGGGCTGCCGGTGATGTCGG
GGCCACCCGTGATGTCGGGTCCGCCCGTGATGCGCAAGGCTCGTCGGGGC
CGCCCGTGATGTCGGGGCTGCCGGTGATGTCGGGGCCACCCGTGATGTCG
GGTCCGCCCGTGATGGGGGGCGGGGTGAGAGGGAGCAACGCTGGTGGTGC
ATTGGAAGTGCCCAACGAGGGGAATGGAGTCAGCGAAGATCCGTTGCAGG
GGGGGCGGGGTGAGAGGGAGCAACGCTGGTGGTGCATTGGAAGTGCCCAA
CGAGGGGAATGGAGTCAGCGAAGATCCGTTGCAGGCGATGATGATGCCGG
CGCCACAGCCGCAGCTGCACCAGCGCCCGCCGCCCGCAGCGCCAGCAGCG
CCCGCCAACCGAGAAGCGGCGGCAACAAGAGACGGCCCCGCGGGCGGCGG
CAACGAGGACGGCGCCAGCGCCCCGCCGCTCGCTCCGCCCCCAGTCCTGC
CCCACCCGGGCCAACCGATGTCTTACCGCGCGGTGAGGAAGCCCCCCGTG
GGTGCCGGGGGTGCCGGCTTTGGTGGCCCTCGACCGAAGGGCTTCGGGGG
AGGGGTGGGACCGTTCGGTGGAGGTGTGGCACGGCCATTTGGCGCGGTCG
CCAGCAGCGGCAACAGCCAGAACGGCGGCGATAGCGAGGGCGGCGGCGGC
GGTGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGGGGGAGGGGGCGAGTT
AGCGGAGGCGACGGCATCGACGAGAGGGGGCGGCTGGGGTACCATGACCT
CGACCACCGCCGGGGGCGGGCGCAGCGGTACCAGCTACAGCAGCGCCGGA
TCGTTCAACGGGAGTTTTGGGAGCGGCCACGGCGGCGGCGGCGGCGGCGG
CGGCGGCGGCGGCGGCGGCGTCGGTGGTGTCGACGTAGGCACCGCGCCGG
AGGTGGCCGCTCAGCAACGGCCGCCGCAGGCCGCAGGGAGCAACGACCCC
GGCGGCGGTGACGGCGGCGGAGGCAGTGCAGAGGGAGAGCTCTCTGGTGG
GGGTGGCGGAGATGGCGAGGGAGGGGAGGCGGCGGGGGCGCTGGCGGCGG
CGGGATACCCCGAAGGCGAACAGGGCAACGGTGGCGGTGGGGGAGGGTTT
GCCTCGTCGCCATGGTCTACGGAGCCAGAGTCGAACACGTTCGGTGGTGT
TTGAGCGATGATGATGCCGGCGCCACAGCCGCAGCTGCACCAGCGCCCGC
CGCCCGCAGCGCCAGCAGCGCCCGCCAACCGAGAAGCGGCGGCAACAAGA
GACGGCCCCGCGGGCGGCGGCAACGAGGACGGCGCCAGCGCCCCGCCGCT
CGCTCCGCCCCCAGTCCTGCCCCACCCGGGCCAACCGATGTCTTACCGCG
CGGTGAGGAAGCCCCCCGTGGGTGCCGGGGGTGCCGGCTTTGGTGGCCCT
CGACCGAAGGGCTTCGGGGGAGGGGTGGGACCGTTCGGTGGAGGTGTGGC
ACGGCCATTTGGCGCGGTCGCCAGCAGCGGCAACAGCCAGAACGGCGGCG
ATAGCGAGGGCGGCGGCGGCGGTGGAGGCGGCGGCGGCGGCGGCGGCGGC
GGTGGGGGAGGGGGCGAGTTAGCGGAGGCGACGGCATCGACGAGAGGGGG
CGGCTGGGGTACCATGACCTCGACCACCGCCGGGGGCGGGCGCAGCGGTA
CCAGCTACAGCAGCGCCGGATCGTTCAACGGGAGTTTTGGGAGCGGCCAC
GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTCGGTGGTGT
CGACGTAGGCACCGCGCCGGAGGTGGCCGCTCAGCAACGGCCGCCGCAGG
CCGCAGGGAGCAACGACCCCGGCGGCGGTGACGGCGGCGGAGGCAGTGCA
GAGGGAGAGCTCTCTGGTGGGGGTGGCGGAGATGGCGAGGGAGGGGAGGC
GGCGGGGGCGCTGGCGGCGGCGGGATACCCCGAAGGCGAACAGGGCAACG
GTGGCGGTGGGGGAGGGTTTGCCTCGTCGCCATGGTCTACGGAGCCAGAG
TCGAACACGTTCGGTGGTGTTTGA
back to top