mRNA_L-elsbetiae_contig5271.13401.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5271.13401.1
Unique NamemRNA_L-elsbetiae_contig5271.13401.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5271.13401.1 vs. uniprot
Match: D8LLH7_ECTSI (PINc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH7_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 1.500e-66
Identity = 118/200 (59.00%), Postives = 141/200 (70.50%), Query Frame = 1 
Query:  139 LEENKEAVAAVSLAVPTAPNLVVFDTNWFIHNLADVMCRVEDIAREHKDASILIPGEVLRELDRLKDRGKDEETKFFARKANEYLADLAESLAKRPLEHGRYSSILRFQEEETEFYKGQGSSSRPKGLRGDASILDCCLYFTREMDPPRRVTLITSDNNFVIRAISKGLSTMRRPQCVPGRCLMPFCPATPRPSPFSWSY 738
            +EE K+    VSLA+PTAP LV FDTNW IH LAD MCRV DIA   KD S+LIP  VL ELDRLK RG+DE T+  A+KAN Y   L E    +PLE GR   ++R QE+ TE ++  G  SRP+GL GD SIL+CC++FT+ +D PR+VTL+T DNNF IRA + GL+T  RPQC PG C MP CPA PRPSPFS  Y
Sbjct:  440 VEEIKKKKDTVSLAMPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVE----KPLERGREFPVVRVQED-TELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY 634
[Close]
BLAST of mRNA_L-elsbetiae_contig5271.13401.1 vs. uniprot
Match: A0A6H5JRN9_9PHAE (PINc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRN9_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 4.820e-65
Identity = 118/200 (59.00%), Postives = 141/200 (70.50%), Query Frame = 1 
Query:  139 LEENKEAVAAVSLAVPTAPNLVVFDTNWFIHNLADVMCRVEDIAREHKDASILIPGEVLRELDRLKDRGKDEETKFFARKANEYLADLAESLAKRPLEHGRYSSILRFQEEETEFYKGQGSSSRPKGLRGDASILDCCLYFTREMDPPRRVTLITSDNNFVIRAISKGLSTMRRPQCVPGRCLMPFCPATPRPSPFSWSY 738
            +EE K+    VSLAVPTAP LV FDTNW IH LAD MCRV DIA   KD S+LIP  VL ELDRLK RG+DE T+  A+KAN Y   L E    +PLE GR   ++R Q++ TE ++  G  SRP+GL GD SIL+CC++FT+ +D PR+VTL+T DNNF IRA + GL+T  RPQC PG C MP CPA PRPSPFS  Y
Sbjct:  677 VEEIKKKKDTVSLAVPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVE----KPLERGREFPVVRVQDD-TELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY 871
[Close]
BLAST of mRNA_L-elsbetiae_contig5271.13401.1 vs. uniprot
Match: A0A836CK80_9STRA (PIN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK80_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 3.340e-11
Identity = 60/154 (38.96%), Postives = 75/154 (48.70%), Query Frame = 1 
Query:  184 PTAPNLVVFDTNWFIHNLADVMCRVEDIAREHKDASILIPGEVLRELDRLKDRGKDEETKFFARKANEYLADLAESLAKRPLEHGRYSSILRFQEEETEFYKGQGSSSRPKGLRGDASILDCCLYFTREMDPPRRVTLITSDNNFVIRAISKGL 645
            P AP L+V DTN  +H L        D+ R   DASIL+P EV RELDR K   + E  +F AR+A   L  L +         G Y + LR Q +  E Y   G  + P  LR D +IL+CCLYF        RV L T D  F   A + G+
Sbjct:  599 PAAPVLLVLDTNCLLHCLEGAARLARDVLRARGDASILVPREVYRELDRKKG-DRVETLQFKAREAGRVLQALLDYPRS-----GEYPA-LRGQGDH-ELYTDSGHHAAPARLRADDAILNCCLYFQNTAGC--RVILCTEDQYFRQIATANGI 742
[Close]
BLAST of mRNA_L-elsbetiae_contig5271.13401.1 vs. uniprot
Match: A0A7S3XKL4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKL4_HETAK)

HSP 1 Score: 66.6 bits (161), Expect = 3.020e-10
Identity = 51/131 (38.93%), Postives = 70/131 (53.44%), Query Frame = 1 
Query:  190 APNLVVFDTNWFIHNLA--DVMCRVEDIAREHKDASILIPGEVLRELDRLKDRGK---DEETKFFARKANEYLADLAESLAKRPLEHGRYSSILRFQEEETEFYKGQGS-SSRPKGLRGDASILDCCLYFT 564
            AP L VFDTN ++ + A  DV      +     D  +L+P EVLRELD LK  G    DE T F AR+ +  + +L      R L  GR   +LR Q +   +   QG    RP+ LR DA++L+CCL+F+
Sbjct:    7 APVLWVFDTNVWMEDAATGDVRYAANVVLSARPDVQLLLPREVLRELDGLKKGGPGRGDERTAFQAREGSRLVEELLTD--PRGLGAGRRYPLLRGQRDGELWRDPQGGIHGRPERLRADAAVLNCCLHFS 135
[Close]
BLAST of mRNA_L-elsbetiae_contig5271.13401.1 vs. uniprot
Match: A0A7S2XI71_9EUKA (Hypothetical protein n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XI71_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 2.410e-5
Identity = 52/161 (32.30%), Postives = 75/161 (46.58%), Query Frame = 1 
Query:  199 LVVFDTNWFI------HNLADVMCRVEDIAREHKDASILIPGEVLRELDRLKDRGKDEETKFFARKANEYLADLAESLAKRPLEHGRYSSILR-FQEEETEFYKGQGSSSRPKGLRGDASILDCCLYFTREMDPPRRVTLITSDNNFVIRAISKGLSTMRR 660
            L V DTNW I        L D +  +  I    K  ++LIP  V RELD L    +  E K  A++A   + +          E GR SS      + + E Y  +G    P+ L+ D SIL+CCL+F+R       V L T+D N +IRA  + + T+ +
Sbjct:  100 LFVIDTNWLIKEPEVARGLGDKIHALGLI----KKVAVLIPRAVWRELDGLSKSAR--ECKNNAQRAIRSIYN----------EFGRQSSFRTVLGQMDHEIYTDKGHHINPRALKNDDSILNCCLFFSRNQGSV--VHLCTADKNLLIRAKVEQVQTIEK 242
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5271.13401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LLH7_ECTSI1.500e-6659.00PINc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JRN9_9PHAE4.820e-6559.00PINc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CK80_9STRA3.340e-1138.96PIN domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3XKL4_HETAK3.020e-1038.93Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2XI71_9EUKA2.410e-532.30Hypothetical protein n=2 Tax=Lotharella oceanica T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5271contigL-elsbetiae_contig5271:1189..5935 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score60.8
Seed ortholog evalue9.2e-07
Seed eggNOG ortholog104355.XP_007862453.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Large family of predicted nucleotide-binding domains
EggNOG OGs2299Y@155619,3AC0K@33154,3H4IY@355688,3P9GM@4751,3V2VY@5204,KOG4689@1,KOG4689@2759
COG Functional cat.S
Best tax levelAgaricomycetes incertae sedis
Best eggNOG OGNA|NA|NA
Exons6
Model size770
Cds size678
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5271.13401.1prot_L-elsbetiae_contig5271.13401.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5271 1212..4038 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816544.1087558-UTR-L-elsbetiae_contig5271:1188..12111622816544.1087558-UTR-L-elsbetiae_contig5271:1188..1211Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5271 1189..1211 -
1691683636.113348-UTR-L-elsbetiae_contig5271:1188..12111691683636.113348-UTR-L-elsbetiae_contig5271:1188..1211Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5271 1189..1211 -
1622816544.1773696-UTR-L-elsbetiae_contig5271:4038..40501622816544.1773696-UTR-L-elsbetiae_contig5271:4038..4050Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5271 4039..4050 -
1691683636.189243-UTR-L-elsbetiae_contig5271:4038..40501691683636.189243-UTR-L-elsbetiae_contig5271:4038..4050Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5271 4039..4050 -
1622816544.1889923-UTR-L-elsbetiae_contig5271:5878..59351622816544.1889923-UTR-L-elsbetiae_contig5271:5878..5935Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5271 5879..5935 -
1691683636.1980343-UTR-L-elsbetiae_contig5271:5878..59351691683636.1980343-UTR-L-elsbetiae_contig5271:5878..5935Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5271 5879..5935 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816544.1185832-CDS-L-elsbetiae_contig5271:1211..13701622816544.1185832-CDS-L-elsbetiae_contig5271:1211..1370Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5271 1212..1370 -
1691683636.1257923-CDS-L-elsbetiae_contig5271:1211..13701691683636.1257923-CDS-L-elsbetiae_contig5271:1211..1370Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5271 1212..1370 -
1622816544.1322844-CDS-L-elsbetiae_contig5271:1987..20871622816544.1322844-CDS-L-elsbetiae_contig5271:1987..2087Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5271 1988..2087 -
1691683636.1344254-CDS-L-elsbetiae_contig5271:1987..20871691683636.1344254-CDS-L-elsbetiae_contig5271:1987..2087Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5271 1988..2087 -
1622816544.1428502-CDS-L-elsbetiae_contig5271:2443..25621622816544.1428502-CDS-L-elsbetiae_contig5271:2443..2562Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5271 2444..2562 -
1691683636.145556-CDS-L-elsbetiae_contig5271:2443..25621691683636.145556-CDS-L-elsbetiae_contig5271:2443..2562Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5271 2444..2562 -
1622816544.152412-CDS-L-elsbetiae_contig5271:3191..33911622816544.152412-CDS-L-elsbetiae_contig5271:3191..3391Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5271 3192..3391 -
1691683636.165547-CDS-L-elsbetiae_contig5271:3191..33911691683636.165547-CDS-L-elsbetiae_contig5271:3191..3391Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5271 3192..3391 -
1622816544.1626787-CDS-L-elsbetiae_contig5271:3938..40381622816544.1626787-CDS-L-elsbetiae_contig5271:3938..4038Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5271 3939..4038 -
1691683636.1797905-CDS-L-elsbetiae_contig5271:3938..40381691683636.1797905-CDS-L-elsbetiae_contig5271:3938..4038Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5271 3939..4038 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5271.13401.1

>prot_L-elsbetiae_contig5271.13401.1 ID=prot_L-elsbetiae_contig5271.13401.1|Name=mRNA_L-elsbetiae_contig5271.13401.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=226bp
MTTMKLEGTVDAAAGGTGRSFLSLEENKEAVAAVSLAVPTAPNLVVFDTN
WFIHNLADVMCRVEDIAREHKDASILIPGEVLRELDRLKDRGKDEETKFF
ARKANEYLADLAESLAKRPLEHGRYSSILRFQEEETEFYKGQGSSSRPKG
LRGDASILDCCLYFTREMDPPRRVTLITSDNNFVIRAISKGLSTMRRPQC
VPGRCLMPFCPATPRPSPFSWSYCC*
back to top

mRNA from alignment at L-elsbetiae_contig5271:1189..5935-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5271.13401.1 ID=mRNA_L-elsbetiae_contig5271.13401.1|Name=mRNA_L-elsbetiae_contig5271.13401.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4747bp|location=Sequence derived from alignment at L-elsbetiae_contig5271:1189..5935- (Laminarionema elsbetiae ELsaHSoW15)
GCGGCGGCGGCCGTGTCGTCGTGGGAGAAGACGGAAGAGGACGACGAGCT
CGCCGAGGTACGTATGTACGTGCCGTGCGACAGTGATTCACAGGGGCGTG
TGGTATGATAGTGCGGTCTGCAGTTTCTTCGGGGCAGCAGCGGTGGTGGT
GGGTAGGGGGGGGGGGGGGGGTTGGGGGACTGCCCGTTTTTTTCAAGGGG
TTTGTTGGGGGCGGGGGCTGTCCATCTGCTGGTTTTTCAAAAGNNNNNNN
NNNGGGGGGGTGGGTGGGGGGTTGAGCGTGGTTTGGGGCGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTGGTCGACTG
CCCGTTTTTCTCAAGGCGTTTGTTGGGGGCGCATGCTGTCCATCTGCTGG
TTTTTCAGCAGAGTAGCAGCGGTGCAGGTGGGATCTTTTTCCTGGGTAGC
TAAGGTTTTGTAACCGCCGGGTAAACGCCGTAAATGAGCCCCGAAAACGA
AGCGGAATCCAACAAACGACCTAAAATGTAAGGCCGTTTCTTACGCTGTG
TCTAATTTGAGATAATTAGTTTTGTTTTTCTCAATGACAGATTCTTACAC
TGAAAAATTATTTGGGATCGAGCGACCTTCTTACGGGTGGACGAGGTATT
TTTTTTTCGTGGGGAAAAAAAAAGGGCAATTGTGCATCACAGGATGCTTC
CATTCACATTTTTAGCTCGTATTCGACCGACAAGTCGCAAAGCGCTCTTA
TTTTGGGACGCCTGCAGAGGGTACGTGCATGACCCCACGCCATCGGCTGC
AGTTTGTGGTTATTTCTAGCCGAAGGCCTCCGTCGGACATGCACTTTTTA
CTTGACACACATCAACACAACGACGAAAAAATGCCAAGAGTAAAATAACT
CCTGTATCGAAATCAACTCCAGTTGACGTTCGCTGGTCGTGCGCACTCAA
TTCTTGGCCGCGTGCCCTGGTTTCGGGACGCCTGCAGAGGCCATGAGTAT
GAACCCACGCCGTGGGCAGTAGTTTGTGGACGTTGTGGCCTAAGACCTCT
GTCGGGCATGCGGTTTTTGTTTGACACACATCAACACGAGGAAGAAAAAT
GCAAGAGCCGAAAAAGTTCCGCATTGAAATCAACTTCAGTCGACGTTGGC
TGGTCGCGCGCACTCAATTCTTGGCCGCGTGCCCTGATTTCGGGACGCCT
GCAGAGGCCTTGTGTACGAGCCCACGCCATGGGCAGCAGTTTGTGGATGT
TGCCGGCCTAAGGTCTCTCTCGGGCATGCGTTTTTTGGTTGACACACACG
CAGCAGGGAAAAACCGGCTCTTTTCACACCCAAACGGAGATTGTGGGCAG
TACAACGTTCGCAGGTCGACGTTTTAGCTCGTGCGTGGTCAACAAAGCGC
CGAACACCCTGAATTTTGGATGCCTGCAGAGGATTTGTTCATGACCCCAC
CGTATTGACCTCTGTTTGGGCAGCAGTTGATGTAGTTGCTCGTTCTGGCA
CGATCACCTGTGTGATCGGGTGAGATCTCCCCCAATTCGTACAGCCAAAA
AATCAGCCGAGCCCAGTAAATAAATGGGCCCATTTTCTCATTCGGCCACT
GGATTCCCGGATTATTTTTGGGTTGTAGGAATTTGGCTGTAGGAATTTGC
CAAATTCCTATAGCGTAAGAAGTCCAATTTTGTTTTTTAGAAAATTTACC
CCCCCCCCCCCAATATTTATTCGAAAAAATCACAACGTAAGAAATGGCCT
AACCTTTGTTTTTCGCCTACGAAAATTGGACCCCATCGTTTACCCACACC
TACAAACGTGCTGTCCCCCGCCCGTCGTCATGGGTCTGGCACCAACCTTC
CCCCGATATCGCTTGTCTCGCGTGCCGTGGGACAGCTCACGAGCAACATG
ACGACCATGAAGCTGGAGGGAACGGTGGATGCGGCCGCTGGTGGCACGGG
GAGGTCGTTCCTGTCTCTGGAAGAGAACAAGGAGGCCGTCGCGGCAGGTT
CGTGTCGAGACTACTACTGTACCACTACCTGCTGTTTGCTACTTGCCGCT
GGGTCCAGGAACATACCCGCGAGCTGCGATGGTTTGTATTTCCGTTTCAC
AGCAAGCCATCGAGGCTCAGCGTTGTGCGTAAGATCGTATACTCAGTGTG
GTATTTAGCACATAAAGATGAAAGGAACTTTTTTCGTTCGAATCGGTAAC
ACCGTTAGTCAGCTAGGGTTTTCATGCCGGCAAAGGTCGGAGAGATCGCA
CAGGGGTTTGCGCTAGAGAAACATAACATCTAATCACGCGCAGGGTCCCA
GAGAGCCGCAACAGCCGCTGCGCCGCTGTTATCGCCGTCCGCAGGTAGGG
TTGTGATTGACCGAAAAATGTGGAAAGCACTACTGCTGCGTACAGGTCAA
AACGAGCTGGTGCTTATTACTTATTACAACACGAAAGCTGCGCCGACAAC
GCACGTCGCAGAAACCGGCAACAACCAACGACAGCGAGCATCCCAACTCA
CGAGAGCGGTTTTTATCTCGATCATCCTCCCGTCCTTTGTCCAGTTTCTC
TGGCTGTGCCGACGGCGCCGAACCTGGTTGTGTTTGACACGAACTGGTTT
ATTCACAACCTAGCCGACGTCATGTGCCGCGTCGAGGACATCGCCCGGGA
GCACAAGGACGCCTCCATTCTCATCCCGGGCGAGGTGCTGAGGGAGCTCG
ACAGGCTCAAGGACCGCGGAAAAGACGAGGAAACGAAGTTCTTTGTGAGC
CTACTAGTGGTTAGAGGCCGTTTCGGCTTATGTTCAGCAGGGTTAGGGGT
TGGGAAGATTTCGCGTTGTTGATACTCCTGCATATATGTACATATCTTGG
GGCATGTAGCGCGCTTTGAGAATGATCTGCGGTAACCCTGAGTGGCCTAT
CTAGGGTATGGTGTTTTGGGGTTGTGTGTAGCCTGGGAAATGCTTAACTG
TGTGCGCTTTCTTGGAAAGGCGCGTGAAGACTGGTGTCGATGAGCGAGAG
TAGCTTGTGCTTCGGACATGGCCTTTTGGGGCCATGTTTTACTTTATCTG
GTCATTAAGCTGAAGATCTGCAGAGAAACCAACTAATGCGGTAAACACAC
GAGTTTTTGTTTTTTCCCGTGATCGTCTGAACGTCTGTGAGCAACAAGCA
GCCCCAAGTGACATACATGCCTGGATACACACCTCAAGAAATTTATCTTC
GTTGTCCGCCCGCCGTGAGTGGCATCTTATTGCATCTTGGTTCGTTCATC
TCGAGAGTCAGGTCTGTGTCTCCCCACCTTGCTTCGTCGTGTCGACTTCT
TTTCACTAGCCTTATAATTAACTTCGTTTTCGTTTCTGGACATACATGTG
CACCATCATGCTTGCTACAATAGGCGCGAAAGGCGAACGAATACTTAGCG
GACCTTGCGGAAAGCCTTGCGAAACGCCCTCTCGAGCACGGCAGGTATTC
CTCGATTCTCCGCTTCCAGGAGGAGGAGACGGAGTTTTACAAGTGAGAGG
CGTGTTTTGTTGTCTTCGTGATTGTGCAGGCTGGTTGTTTGTCCGAAGAG
AGCCCAGGGTCTTTGCAGGCGTGGGGTCACTCGCCCACCGTGTTCTTTCG
CGTGTGCATGTGCCTCTTTTTCTCCCTTCTGTTGACCAGTTATTCCGTTT
CTATTTCTCCGTTCCCTGCTAAAGGGCACACCAAAACCCTTCAAAGAACG
GACGACTGCTGACGTTTCGTCATCGAAAATATGAAGTACAAGCAAAAGCG
TGGCAACACACACACACACATTAGTTGTGGCCATTTTATCGTCTTAACTG
ACGCGCTTGTGTACACCTGTCTACGTGGCGAAAACTGCCCTCTCGCAGGG
GTCAGGGGTCCAGTTCCAGGCCCAAGGGCCTCCGCGGCGACGCCTCTATC
CTGGACTGCTGCTTGTACTTCACGCGAGAGATGGATCCACCCCGCAGGGT
TCGTTTCTTACACGAACGTGTGCTTGGTACTTTATTATTTCTATTTGTTG
AGATACTGCGCACGTAAAATAGTGGGGACGGGGGGGATCCAAGCGTTCAA
ATCACGTCCGCTCGGACAACGCGCAACTACTTGTACTTCTCCAGTCGGAA
GGAAGTTTTTTTTTTTTTTTTTTTCTTCCCCTTTTTGGCTTTTTTTCGTC
TTCCCTCTTGCCCCCCTCCTCCCCTTTTTCTCTNNNNNNNNNNTCCGCGC
CGACGCTTGTGTTTTGTTCTTCTTTTTTTACTTCTCCGGTCGGAAGGAAG
TTTTTTTTTTTTTTTTGTCTGCCCATTATTGGCTTTTTGTCGTCTGCCCT
CTGGCCCCCATCCTCCACTTCTACTCTAGCTAGACGTTGTGCATACATAC
AACCCCCCGTTTACATGACTCTGCTCGACTCTACAGCGAGAACACGACAT
CGCCATCACGTCTTTCATTCGTCTTATTATGCAGTTGCAAGCCCGCACCC
GGTACAGAGAGCCAACCCAAGGAAATAAAATCGAAGTAGGTTGGTACATA
GATGTTGTGTAGCGGGGGTATAGTCTTATCCGCCTCCTTTTCTTGGTCTT
CACCTTTTGTGCCAGGTTACCCTCATCACCAGCGACAACAACTTCGTCAT
TCGGGCCATCTCGAAAGGTTTGAGCACCATGAGGCGCCCCCAGTGCGTAC
CAGGGCGCTGCCTCATGCCGTTTTGCCCCGCTACTCCACGCCCGTCCCCG
TTCTCGTGGAGCTACTGCTGTTGAGATCTTGGGGAGGAGACCCACCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5271:1189..5935-

>mRNA_L-elsbetiae_contig5271.13401.1 ID=mRNA_L-elsbetiae_contig5271.13401.1|Name=mRNA_L-elsbetiae_contig5271.13401.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1356bp|location=Sequence derived from alignment at L-elsbetiae_contig5271:1189..5935- (Laminarionema elsbetiae ELsaHSoW15)
ATGACGACCATGAAGCTGGAGGGAACGGTGGATGCGGCCGCTGGTGGCAC
GGGGAGGTCGTTCCTGTCTCTGGAAGAGAACAAGGAGGCCGTCGCGGCAG
ATGACGACCATGAAGCTGGAGGGAACGGTGGATGCGGCCGCTGGTGGCAC
GGGGAGGTCGTTCCTGTCTCTGGAAGAGAACAAGGAGGCCGTCGCGGCAG
TTTCTCTGGCTGTGCCGACGGCGCCGAACCTGGTTGTGTTTGACACGAAC
TGGTTTATTCACAACCTAGCCGACGTCATGTGCCGCGTCGAGGACATCGC
CCGGGAGCACAAGGACGCCTCCATTCTCATCCCGGGCGAGGTGCTGAGGG
AGCTCGACAGGCTCAAGGACCGCGGAAAAGACGAGGAAACGAAGTTCTTT
TTTCTCTGGCTGTGCCGACGGCGCCGAACCTGGTTGTGTTTGACACGAAC
TGGTTTATTCACAACCTAGCCGACGTCATGTGCCGCGTCGAGGACATCGC
CCGGGAGCACAAGGACGCCTCCATTCTCATCCCGGGCGAGGTGCTGAGGG
AGCTCGACAGGCTCAAGGACCGCGGAAAAGACGAGGAAACGAAGTTCTTT
GCGCGAAAGGCGAACGAATACTTAGCGGACCTTGCGGAAAGCCTTGCGAA
ACGCCCTCTCGAGCACGGCAGGTATTCCTCGATTCTCCGCTTCCAGGAGG
AGGAGACGGAGTTTTACAAGCGCGAAAGGCGAACGAATACTTAGCGGACC
TTGCGGAAAGCCTTGCGAAACGCCCTCTCGAGCACGGCAGGTATTCCTCG
ATTCTCCGCTTCCAGGAGGAGGAGACGGAGTTTTACAAGGGTCAGGGGTC
CAGTTCCAGGCCCAAGGGCCTCCGCGGCGACGCCTCTATCCTGGACTGCT
GCTTGTACTTCACGCGAGAGATGGATCCACCCCGCAGGGGGTCAGGGGTC
CAGTTCCAGGCCCAAGGGCCTCCGCGGCGACGCCTCTATCCTGGACTGCT
GCTTGTACTTCACGCGAGAGATGGATCCACCCCGCAGGGTTACCCTCATC
ACCAGCGACAACAACTTCGTCATTCGGGCCATCTCGAAAGGTTTGAGCAC
CATGAGGCGCCCCCAGTGCGTACCAGGGCGCTGCCTCATGCCGTTTTGCC
CCGCTACTCCACGCCCGTCCCCGTTCTCGTGGAGCTACTGCTGTTGAGTT
ACCCTCATCACCAGCGACAACAACTTCGTCATTCGGGCCATCTCGAAAGG
TTTGAGCACCATGAGGCGCCCCCAGTGCGTACCAGGGCGCTGCCTCATGC
CGTTTTGCCCCGCTACTCCACGCCCGTCCCCGTTCTCGTGGAGCTACTGC
TGTTGA
back to top