mRNA_L-elsbetiae_contig527.13399.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig527.13399.1
Unique NamemRNA_L-elsbetiae_contig527.13399.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig527.13399.1 vs. uniprot
Match: D8LP25_ECTSI (60S acidic ribosomal protein P0 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP25_ECTSI)

HSP 1 Score: 458 bits (1178), Expect = 1.770e-160
Identity = 228/242 (94.21%), Postives = 237/242 (97.93%), Query Frame = 1
Query:  112 MAKIRFALRGSATVLMGKNTMIRKIISVYIKDNPGHPLEAILPRVVGNVGFIFTNGELGDIRDVIEAHRVPAPARVGSLAPIDVMVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPKGQKVGSSEAALLQKLSIRPFTYGLVIDCVYDNGSVFDAAVLDLTDADLANKFSAACGNVAAVCLEIGFPTLASLPHSIANAFRAMVGVVIEGCDTYSFDAADTIKAILADPSAFAA 837
            MAKIR+ALRGSATVLMGKNTMIRKIISV++KDNPGHPLE ILPRVVGNVGFIFTNGELGDIRDVIEAHRVPAPARVGS+APIDVMVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITT+VFLVPKGQKVGSSEAALLQKLSIRPFTYGLVIDCVYDNGSVFDAAVLDLTD D+ NKF+AACGNVAAV LE+GFPTLASLPHSIANAFRA+VGVVIEGCDTYSFD ADTIKAILADPSAFAA
Sbjct:    1 MAKIRYALRGSATVLMGKNTMIRKIISVFLKDNPGHPLELILPRVVGNVGFIFTNGELGDIRDVIEAHRVPAPARVGSIAPIDVMVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTQVFLVPKGQKVGSSEAALLQKLSIRPFTYGLVIDCVYDNGSVFDAAVLDLTDEDMGNKFAAACGNVAAVSLELGFPTLASLPHSIANAFRALVGVVIEGCDTYSFDQADTIKAILADPSAFAA 242          
BLAST of mRNA_L-elsbetiae_contig527.13399.1 vs. uniprot
Match: A0A8D0Z1H1_PIG (RL10P_insert domain-containing protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D0Z1H1_PIG)

HSP 1 Score: 447 bits (1150), Expect = 4.840e-155
Identity = 234/315 (74.29%), Postives = 252/315 (80.00%), Query Frame = 1
Query:    1 MPLSPERKTWYFERLKDLIDNHTKIFMVQADNVGSNQMAKIRFALRGSATVLMGKNTMIRKIISVYIKDNPGHPLEAILPRVVGNVGFIFTNGELGDIRDVIEAHRVPAPARVGSLAPIDVMVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEIT--------------------------------TEVFLVPKGQKVGSSEAALLQK----LSIRPFTYGLVIDCVYDNGSVFDAAVLDLTDADLANKFSAACGNVAAVCLEIGFPTLASLPHSIANAFRAMVGVVIEGCDTYSFDAADTIKAILADPSAFAA 837
            MPLSPERKTWYFERLK L+DNHTKIF+VQADNVGS+QMAKIRFALRG+ATVLMGKNTMIRKIIS Y+KD+PGHP E +LP+VVGN+GFIFTNGELG IRDVIE HRVPAPARVGS+AP DV VPPGPTGCDPGQTSFFQVLQVPTKITKGQIEIT                                  V +V +G    S   A   K    L+IRPFTYGL+IDCVYDNGSVFDAAVLDLTDAD+ANKF+AAC NVAAV LE+GFPTLASLPHSIANAFRAMVGVVIEGC TYSF  ADT+KAILADPSAFAA
Sbjct:    1 MPLSPERKTWYFERLKGLLDNHTKIFLVQADNVGSSQMAKIRFALRGTATVLMGKNTMIRKIISTYVKDHPGHPFELLLPKVVGNIGFIFTNGELGAIRDVIEEHRVPAPARVGSVAPTDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITFAAACANVAAVSLELGFPTLASLPHSIANAFRAMVGVVIEGCSTYSFAQADTVKAILALNIRPFTYGLMIDCVYDNGSVFDAAVLDLTDADMANKFAAACANVAAVSLELGFPTLASLPHSIANAFRAMVGVVIEGCSTYSFAQADTVKAILADPSAFAA 315          
BLAST of mRNA_L-elsbetiae_contig527.13399.1 vs. uniprot
Match: A0A835YRE1_9STRA (60S acidic ribosomal protein P0 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRE1_9STRA)

HSP 1 Score: 385 bits (988), Expect = 1.740e-131
Identity = 189/275 (68.73%), Postives = 227/275 (82.55%), Query Frame = 1
Query:    1 MPLSPERKTWYFERLKDLIDNHTKIFMVQADNVGSNQMAKIRFALRGSATVLMGKNTMIRKIISVYIKDNPGHPLEAILPRVVGNVGFIFTNGELGDIRDVIEAHRVPAPARVGSLAPIDVMVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPKGQKVGSSEAALLQKLSIRPFTYGLVIDCVYDNGSVFDAAVLDLTDADLANKFSAACGNVAAVCLEIGFPTLASLPHSIANAFRAMVGVVIEGCDTYSFDAADTIKAILADPS 825
            MPLS ERK WYF+RL++L+ +++KI +VQ DNVGS QMA+IR ALRG A VL+GKNTMIRKI++ YIK NPGHP E ++PRV GNVGFIFTNG+LG +R+VIE +RVPAPARVG++AP+DV VPPGPTGCDPGQTSFFQVLQ+PTKI KGQIEIT EV LV KG KVG+SEA LL +LSIRPFTYGLVI+ VYDNGS+F+AAVLDLTD DL  +F  A  NVAA  L +G+PTLASLPHSIANAF+A+V V ++ C   +F  A+  K +L  P+
Sbjct:    1 MPLSAERKEWYFKRLEELLGSYSKILLVQCDNVGSRQMAQIRLALRGQAVVLLGKNTMIRKILTNYIKQNPGHPYENLIPRVRGNVGFIFTNGDLGKVREVIEENRVPAPARVGAVAPVDVFVPPGPTGCDPGQTSFFQVLQIPTKIAKGQIEITNEVHLVKKGDKVGNSEAVLLTRLSIRPFTYGLVIELVYDNGSIFEAAVLDLTDDDLRARFVGAVRNVAAASLALGYPTLASLPHSIANAFKALVAVAVQ-CPGVTFAQAEPFKKLLPAPA 274          
BLAST of mRNA_L-elsbetiae_contig527.13399.1 vs. uniprot
Match: K3WAY4_GLOUD (60S acidic ribosomal protein P0 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAY4_GLOUD)

HSP 1 Score: 385 bits (989), Expect = 2.940e-131
Identity = 191/279 (68.46%), Postives = 230/279 (82.44%), Query Frame = 1
Query:    1 MPLSPERKTWYFERLKDLIDNHTKIFMVQADNVGSNQMAKIRFALRGSATVLMGKNTMIRKIISVYIKDNPGHPLEAILPRVVGNVGFIFTNGELGDIRDVIEAHRVPAPARVGSLAPIDVMVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPKGQKVGSSEAALLQKLSIRPFTYGLVIDCVYDNGSVFDAAVLDLTDADLANKFSAACGNVAAVCLEIGFPTLASLPHSIANAFRAMVGVVIEGCDTYSFDAADTIKAILADPSAFAA 837
            M LS ERK  YF +L++L+DN+TKIF+V  DNVGSNQ+ +IR +LRG A +LMGKNT+IRK+ S YIK NPGHPLE ++P + GNVGF+FTN +L  IR+V+E+++VPAPARVG++APIDV++PPGPTGCDPGQT+FFQ LQV TKI KGQIEI  EV L  KG+KVG+SEA LLQKL+IRPFTYGLVI  VYDNGS+FD AVLDLT+ DL  KF A   NVAAV LEIGFPTLAS+PHS+ANAF+ +V VV+E  D++SF  AD  KA LADPSAFAA
Sbjct:    1 MGLSQERKQEYFSKLENLLDNYTKIFLVGVDNVGSNQIQQIRISLRGRAEILMGKNTLIRKVFSNYIKKNPGHPLEQVIPLLKGNVGFVFTNQDLNQIREVLESNKVPAPARVGAVAPIDVIIPPGPTGCDPGQTAFFQALQVGTKIQKGQIEIINEVLLTKKGEKVGNSEAVLLQKLNIRPFTYGLVIQTVYDNGSIFDPAVLDLTEDDLTAKFVAGLRNVAAVSLEIGFPTLASIPHSVANAFKTLVAVVVE-LDSFSFAKADPYKAYLADPSAFAA 278          
BLAST of mRNA_L-elsbetiae_contig527.13399.1 vs. uniprot
Match: D0NVM9_PHYIT (60S acidic ribosomal protein P0 n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0NVM9_PHYIT)

HSP 1 Score: 375 bits (963), Expect = 2.800e-127
Identity = 183/278 (65.83%), Postives = 228/278 (82.01%), Query Frame = 1
Query:    1 MPLSPERKTWYFERLKDLIDNHTKIFMVQADNVGSNQMAKIRFALRGSATVLMGKNTMIRKIISVYIKDNPGHPLEAILPRVVGNVGFIFTNGELGDIRDVIEAHRVPAPARVGSLAPIDVMVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPKGQKVGSSEAALLQKLSIRPFTYGLVIDCVYDNGSVFDAAVLDLTDADLANKFSAACGNVAAVCLEIGFPTLASLPHSIANAFRAMVGVVIEGCDTYSFDAADTIKAILADPSAFA 834
            M LS ERK  YF++L+ L++N+TKIF+V  DNVGS QM +IR  LRG A VLMGKNT++RK+ + ++K NPGHPLE  +P + GNVGF+FTN +L +IR+V+E++RVPAPARVGS+AP+DV+VPPGPTG DPGQTSFFQ LQ+ TKI KGQIEI TEV L  KG+KVG+SEAALLQKL I+PF+YGLVI+ VYDNGS+FD AVLDLT+ADL  KF A   NVAA+ LE+G PTLAS+PHSIANAF+ +V + +E C+ +SF+ A+  KA LADPSAFA
Sbjct:    1 MGLSQERKLEYFDKLESLLENYTKIFLVGVDNVGSAQMQQIRLVLRGRAEVLMGKNTLMRKVFNNFVKKNPGHPLELFIPLLKGNVGFVFTNDDLSEIREVLESNRVPAPARVGSIAPVDVIVPPGPTGADPGQTSFFQALQIATKIQKGQIEIVTEVMLTRKGEKVGNSEAALLQKLDIKPFSYGLVIEQVYDNGSIFDPAVLDLTEADLCAKFVAGLRNVAAMSLELGIPTLASIPHSIANAFKDLVAIAVE-CEEFSFEKAEPYKAFLADPSAFA 277          
BLAST of mRNA_L-elsbetiae_contig527.13399.1 vs. uniprot
Match: A0A6V2YPM3_HETAK (60S acidic ribosomal protein P0 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2YPM3_HETAK)

HSP 1 Score: 374 bits (961), Expect = 5.440e-127
Identity = 182/274 (66.42%), Postives = 226/274 (82.48%), Query Frame = 1
Query:   16 ERKTWYFERLKDLIDNHTKIFMVQADNVGSNQMAKIRFALRGSATVLMGKNTMIRKIISVYIKDNPGHPLEAILPRVVGNVGFIFTNGELGDIRDVIEAHRVPAPARVGSLAPIDVMVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPKGQKVGSSEAALLQKLSIRPFTYGLVIDCVYDNGSVFDAAVLDLTDADLANKFSAACGNVAAVCLEIGFPTLASLPHSIANAFRAMVGVVIEGCDTYSFDAADTIKAILADPSAFAA 837
            E+K  YF R++ +I+ +TK F+V  DNVGS+QM +IR ALRG A VLMGKNTM+RK+I+ ++K NPGHP E I  ++ GNVG +FTNG+LG++R  IE +RVPAPARVGS+AP++V+VPPGPTGCDPGQTSFFQVLQ+ TKI++GQIEI   V L+  G KVG+SEAALLQKL I+PFTYGLVID +YDNGS+FDA VLDLTDADL  KF AA   +A+VCLEIG+PTLAS+PHSIANAF+ +V V +E C+T+SF+ A+  KA LADPSAFAA
Sbjct:    4 EKKIEYFSRMEGMIETYTKCFIVGVDNVGSHQMQQIRLALRGEAEVLMGKNTMMRKVIAEFMKKNPGHPFEQISAKLRGNVGLVFTNGDLGEVRTKIEENRVPAPARVGSIAPVEVIVPPGPTGCDPGQTSFFQVLQIATKISRGQIEIVAPVSLLSAGDKVGNSEAALLQKLDIKPFTYGLVIDSIYDNGSLFDAKVLDLTDADLQAKFMAAVSKLASVCLEIGYPTLASMPHSIANAFKKLVAVAVE-CETFSFEKAEPYKAYLADPSAFAA 276          
BLAST of mRNA_L-elsbetiae_contig527.13399.1 vs. uniprot
Match: A0A0P6IAI3_9CRUS (60S acidic ribosomal protein P0 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P6IAI3_9CRUS)

HSP 1 Score: 373 bits (958), Expect = 1.550e-126
Identity = 181/278 (65.11%), Postives = 225/278 (80.94%), Query Frame = 1
Query:    1 MPLSPERKTWYFERLKDLIDNHTKIFMVQADNVGSNQMAKIRFALRGSATVLMGKNTMIRKIISVYIKDNPGHPLEAILPRVVGNVGFIFTNGELGDIRDVIEAHRVPAPARVGSLAPIDVMVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPKGQKVGSSEAALLQKLSIRPFTYGLVIDCVYDNGSVFDAAVLDLTDADLANKFSAACGNVAAVCLEIGFPTLASLPHSIANAFRAMVGVVIEGCDTYSFDAADTIKAILADPSAFA 834
            M LS ERK  YF +L+ L++N TKIF+V  DNVGS+QM +IR  LRG A +LMGKNT++RK+ S +IK NPGHPLE  +P + GNVGF+FTN +L  IR+V+E ++VPAPARVG++AP+DV++P GPTGCDPGQTSFFQ L + TKI KGQIEI T+V +V +G+KVG+SEAALLQKL+IRPF YGLVI  VYDNGS+FD AVLDLT+ DL  KF+A   NVAA+ LEIGFPTLAS+PHS+ANAF+ +V + +E C+T+SF  AD  KA LADPSAFA
Sbjct:    1 MGLSQERKLEYFTKLETLLENFTKIFLVNVDNVGSHQMQQIRLELRGRAELLMGKNTLMRKVFSNFIKKNPGHPLENFIPLLKGNVGFVFTNADLNQIREVVEGNKVPAPARVGAIAPVDVIIPAGPTGCDPGQTSFFQTLSIGTKIAKGQIEIVTDVLMVKQGEKVGNSEAALLQKLNIRPFAYGLVISQVYDNGSLFDPAVLDLTEDDLCAKFAAGLRNVAAISLEIGFPTLASIPHSVANAFKTLVAIAVE-CETFSFKKADPFKAYLADPSAFA 277          
BLAST of mRNA_L-elsbetiae_contig527.13399.1 vs. uniprot
Match: A0A485KPX2_9STRA (60S acidic ribosomal protein P0 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPX2_9STRA)

HSP 1 Score: 372 bits (956), Expect = 3.130e-126
Identity = 178/279 (63.80%), Postives = 230/279 (82.44%), Query Frame = 1
Query:    1 MPLSPERKTWYFERLKDLIDNHTKIFMVQADNVGSNQMAKIRFALRGSATVLMGKNTMIRKIISVYIKDNPGHPLEAILPRVVGNVGFIFTNGELGDIRDVIEAHRVPAPARVGSLAPIDVMVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPKGQKVGSSEAALLQKLSIRPFTYGLVIDCVYDNGSVFDAAVLDLTDADLANKFSAACGNVAAVCLEIGFPTLASLPHSIANAFRAMVGVVIEGCDTYSFDAADTIKAILADPSAFAA 837
            M +S ERK  YF +L++L++N+T+IF+V  DNVGSNQ+ +IR ALRG+A VLMGKNTMIRK+ + ++K NPGHPLE ++P + GNVGF+FTN +LG +R+ +EA++VPAPARVG++APIDV  P GPTGCDPGQTSFFQ LQ+ TKI KGQIEI ++V L  KG+KVG+SEAALLQKL+IRPF+YGL+I  VYDNGS+FD AVLDLT+ +L  KF     NVAAV L +GFPTLAS+PHS+ANAF+++V + +E C+++SF+ AD  KA LADPSAFA+
Sbjct:    1 MGISMERKAEYFLKLENLLENYTRIFIVGVDNVGSNQIQQIRIALRGTAEVLMGKNTMIRKVFANFVKKNPGHPLETMIPLLKGNVGFVFTNADLGQVRETLEANKVPAPARVGAVAPIDVWCPAGPTGCDPGQTSFFQALQIGTKIQKGQIEIVSDVLLTKKGEKVGNSEAALLQKLNIRPFSYGLIIQSVYDNGSIFDPAVLDLTEENLVAKFVGGLRNVAAVSLALGFPTLASIPHSLANAFKSLVAIAVE-CESFSFEKADPFKAFLADPSAFAS 278          
BLAST of mRNA_L-elsbetiae_contig527.13399.1 vs. uniprot
Match: A0A8K1CBN6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBN6_PYTOL)

HSP 1 Score: 370 bits (951), Expect = 1.920e-125
Identity = 182/279 (65.23%), Postives = 224/279 (80.29%), Query Frame = 1
Query:    1 MPLSPERKTWYFERLKDLIDNHTKIFMVQADNVGSNQMAKIRFALRGSATVLMGKNTMIRKIISVYIKDNPGHPLEAILPRVVGNVGFIFTNGELGDIRDVIEAHRVPAPARVGSLAPIDVMVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPKGQKVGSSEAALLQKLSIRPFTYGLVIDCVYDNGSVFDAAVLDLTDADLANKFSAACGNVAAVCLEIGFPTLASLPHSIANAFRAMVGVVIEGCDTYSFDAADTIKAILADPSAFAA 837
            M LS ERK  YF +L+ L++N+TKIF+V  DNVGS+QM +IR ALR  A VLMGKNT++RK+ + +IK NPGHPLE ++P + GNVGF+FTN +L  IRD+IE+H+VPAPARVG++AP+DV+VPPGPTGCDPGQTSFFQ L + TKI +GQIEI +EV L  KG KVG+SEA LLQKL I+PF YGLVI+ VYDNGS+F+ AVLDLT+ DL  KF A   NVAAV LEIGFPTLAS+PHS+ANAF+ +V + +E  + +SF  AD  KA LADPSAFAA
Sbjct:    1 MGLSQERKQDYFTKLESLLENYTKIFLVNVDNVGSSQMQQIRLALRSKAEVLMGKNTLMRKVFTNFIKKNPGHPLENMIPLLKGNVGFVFTNNDLSQIRDLIESHKVPAPARVGAVAPVDVVVPPGPTGCDPGQTSFFQTLNIGTKIQRGQIEIVSEVLLTKKGDKVGNSEAVLLQKLGIKPFAYGLVIEVVYDNGSLFNPAVLDLTEDDLCAKFVAGLRNVAAVSLEIGFPTLASIPHSVANAFKTLVAIAVE-TENFSFAKADPYKAYLADPSAFAA 278          
BLAST of mRNA_L-elsbetiae_contig527.13399.1 vs. uniprot
Match: A0A5D6XUU0_9STRA (60S acidic ribosomal protein P0 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUU0_9STRA)

HSP 1 Score: 369 bits (948), Expect = 4.950e-125
Identity = 185/279 (66.31%), Postives = 224/279 (80.29%), Query Frame = 1
Query:    1 MPLSPERKTWYFERLKDLIDNHTKIFMVQADNVGSNQMAKIRFALRGSATVLMGKNTMIRKIISVYIKDNPGHPLEAILPRVVGNVGFIFTNGELGDIRDVIEAHRVPAPARVGSLAPIDVMVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTEVFLVPKGQKVGSSEAALLQKLSIRPFTYGLVIDCVYDNGSVFDAAVLDLTDADLANKFSAACGNVAAVCLEIGFPTLASLPHSIANAFRAMVGVVIEGCDTYSFDAADTIKAILADPSAFAA 837
            M LS ERK  YF +L+ +++++TKIF+V  DNVGSNQ+ +IR ALR  A +LMGKNT+IRK+ + Y+K NPGHPLE  LP + GNVGF+FTN +L  +R+V+EA++VPAPARVG+LAPIDV+VP GPTG DPGQT FFQ LQ+PTKI KGQIEI  EV L  KG KVG+SEA LLQKL+IRPFTYGLVI  VYDNGS+FD AVLDLT+ DL  KF A   N+AAV LEIGFPTLAS+PHS+ANAF+ +V VV+E  D++SF  AD  KA LA+PSAFAA
Sbjct:    1 MGLSQERKQDYFVKLEHMLESYTKIFLVGVDNVGSNQIQQIRLALRNRAELLMGKNTLIRKVFNNYVKKNPGHPLEQFLPLLKGNVGFVFTNEDLTQVREVLEANKVPAPARVGALAPIDVIVPAGPTGADPGQTGFFQALQIPTKIVKGQIEIINEVLLTKKGDKVGNSEAVLLQKLNIRPFTYGLVIQSVYDNGSLFDPAVLDLTEDDLTAKFVAGLRNIAAVSLEIGFPTLASIPHSVANAFKTLVAVVVE-LDSFSFAKADPYKAYLANPSAFAA 278          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig527.13399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP25_ECTSI1.770e-16094.2160S acidic ribosomal protein P0 n=1 Tax=Ectocarpus... [more]
A0A8D0Z1H1_PIG4.840e-15574.29RL10P_insert domain-containing protein n=1 Tax=Sus... [more]
A0A835YRE1_9STRA1.740e-13168.7360S acidic ribosomal protein P0 n=1 Tax=Tribonema ... [more]
K3WAY4_GLOUD2.940e-13168.4660S acidic ribosomal protein P0 n=1 Tax=Globispora... [more]
D0NVM9_PHYIT2.800e-12765.8360S acidic ribosomal protein P0 n=16 Tax=Peronospo... [more]
A0A6V2YPM3_HETAK5.440e-12766.4260S acidic ribosomal protein P0 n=2 Tax=Heterosigm... [more]
A0A0P6IAI3_9CRUS1.550e-12665.1160S acidic ribosomal protein P0 n=1 Tax=Daphnia ma... [more]
A0A485KPX2_9STRA3.130e-12663.8060S acidic ribosomal protein P0 n=1 Tax=Aphanomyce... [more]
A0A8K1CBN6_PYTOL1.920e-12565.23Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XUU0_9STRA4.950e-12566.3160S acidic ribosomal protein P0 n=1 Tax=Pythium br... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig527contigL-elsbetiae_contig527:32497..36574 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score457.6
Seed ortholog evalue4.8e-126
Seed eggNOG ortholog2880.D8LP25
Preferred nameRPP0
KEGG koko:K02941
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005507,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006950,GO:0006970,GO:0008150,GO:0009266,GO:0009409,GO:0009506,GO:0009507,GO:0009536,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009735,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0030054,GO:0031974,GO:0031981,GO:0032991,GO:0034059,GO:0036293,GO:0042221,GO:0042788,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0046686,GO:0046872,GO:0046914,GO:0048046,GO:0050896,GO:0055044,GO:0070013,GO:0070482,GO:0071944,GO:1990904
EggNOG free text desc.ribosome biogenesis
EggNOG OGsCOG0244@1,KOG0815@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Ec32 ortholog descriptionRibosomal protein L10/acidic P0
Ec32 orthologEc-06_006850.1
Exons6
Model size972
Cds size972
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig527.13399.1prot_L-elsbetiae_contig527.13399.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig527 32497..36574 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816543.6788802-CDS-L-elsbetiae_contig527:32496..325831622816543.6788802-CDS-L-elsbetiae_contig527:32496..32583Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig527 32497..32583 +
1691683635.842853-CDS-L-elsbetiae_contig527:32496..325831691683635.842853-CDS-L-elsbetiae_contig527:32496..32583Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig527 32497..32583 +
1622816543.6925576-CDS-L-elsbetiae_contig527:33380..335241622816543.6925576-CDS-L-elsbetiae_contig527:33380..33524Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig527 33381..33524 +
1691683635.8549638-CDS-L-elsbetiae_contig527:33380..335241691683635.8549638-CDS-L-elsbetiae_contig527:33380..33524Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig527 33381..33524 +
1622816543.7032287-CDS-L-elsbetiae_contig527:34008..342031622816543.7032287-CDS-L-elsbetiae_contig527:34008..34203Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig527 34009..34203 +
1691683635.8641021-CDS-L-elsbetiae_contig527:34008..342031691683635.8641021-CDS-L-elsbetiae_contig527:34008..34203Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig527 34009..34203 +
1622816543.7194788-CDS-L-elsbetiae_contig527:34792..348641622816543.7194788-CDS-L-elsbetiae_contig527:34792..34864Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig527 34793..34864 +
1691683635.8732467-CDS-L-elsbetiae_contig527:34792..348641691683635.8732467-CDS-L-elsbetiae_contig527:34792..34864Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig527 34793..34864 +
1622816543.7299678-CDS-L-elsbetiae_contig527:35622..359281622816543.7299678-CDS-L-elsbetiae_contig527:35622..35928Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig527 35623..35928 +
1691683635.8827434-CDS-L-elsbetiae_contig527:35622..359281691683635.8827434-CDS-L-elsbetiae_contig527:35622..35928Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig527 35623..35928 +
1622816543.7398763-CDS-L-elsbetiae_contig527:36406..365741622816543.7398763-CDS-L-elsbetiae_contig527:36406..36574Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig527 36407..36574 +
1691683635.8956385-CDS-L-elsbetiae_contig527:36406..365741691683635.8956385-CDS-L-elsbetiae_contig527:36406..36574Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig527 36407..36574 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig527.13399.1

>prot_L-elsbetiae_contig527.13399.1 ID=prot_L-elsbetiae_contig527.13399.1|Name=mRNA_L-elsbetiae_contig527.13399.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=324bp
MPLSPERKTWYFERLKDLIDNHTKIFMVQADNVGSNQMAKIRFALRGSAT
VLMGKNTMIRKIISVYIKDNPGHPLEAILPRVVGNVGFIFTNGELGDIRD
VIEAHRVPAPARVGSLAPIDVMVPPGPTGCDPGQTSFFQVLQVPTKITKG
QIEITTEVFLVPKGQKVGSSEAALLQKLSIRPFTYGLVIDCVYDNGSVFD
AAVLDLTDADLANKFSAACGNVAAVCLEIGFPTLASLPHSIANAFRAMVG
VVIEGCDTYSFDAADTIKAILADPSAFAAASGGGGGGGDAPAAAAKVEEE
EEEEEVVGGMSMFGEEEGGGGDY*
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mRNA from alignment at L-elsbetiae_contig527:32497..36574+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig527.13399.1 ID=mRNA_L-elsbetiae_contig527.13399.1|Name=mRNA_L-elsbetiae_contig527.13399.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4078bp|location=Sequence derived from alignment at L-elsbetiae_contig527:32497..36574+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCTCTCTCCCCGGAACGTAAGACATGGTACTTCGAGCGCCTGAAGGA CCTGATCGACAACCACACCAAGATCTTCATGGTGCAGGTGCGTCGTTGCA CTGGTTGCAACGTTTGGAGCGGGCGATGCATTTTGTTGTGCGGCCAAGAG GCCCTGACCTTTGCAACGAGGTTACAGGCTCTGCCGTGGCGCTGAATCCA GGCTACATATGTGCATAGATATGTATGTACATCACGTACATCTATGCCTA CACGATTTTAGTAGACTATGCGGGTCTCTGGTAGAAAGCTGCATTAAAAA GCTCAGTCGATCATCGTCCGTATCGGCAACCCCCCCCCCCCCACCTCGGT GCGTGGCCAGCTAAGTAGTCACGGTACTCTACTGCTTTGTTTAGGGAAGA CAAAAGAGATGTGTGTGTGTGTGCTGTTCTGTGTGTGCACATGGCCCCAT CCGAATCTGCTGGCGTGATTCGGTCATGCGGTCCTCGGCGCCGCCCGTCT GATCGTGGGAATCGGGACAAAAGAAAGAGGCCTGGTGCTGCACGACAGCT GTCGTTTGTGCCGCGTCACAAAAGACACACTCGCTTGCCTTCTTTGGCTT GCGTACAGCGCAAGGAGGACTTGTTGCAGGTTGTCTCTCTCCCTGCCTCT CCATTTTATTCACCCCCCGTGGGCGTCGACGCATTTTATTATTTTGGTCG CTCCCTCCCTCCCTCCCTCCCTCCTTTGCCTCTCTGTCCGTCTGGTTTGG ATGTTTCGTGTGTCATCCTGCCTTTCCCTATCATCACGCCCCCCCCCCAT CCCCCCTTCTAATCTGCTTTTACTCTCTGTCTCTCGACTCTATCTCTCGC TGGGTACCCCGCCCACTGCTCTCGGCCCGCCCAGGCCGACAACGTGGGGT CTAACCAGATGGCCAAGATCCGGTTCGCGCTCCGCGGCTCCGCCACGGTG CTCATGGGCAAGAACACCATGATCCGCAAGATCATCAGCGTGTACATCAA GGACAACCCGGGCCACCCCCTGGAGGCGGTGAGAGCAATTTTTCTTGCGT CTCTTTCGTTGCTCCTCCACGGTTTTGGCGTTTTTATCTCGAGTGCAGAT GTGACATTTATCTATATGTAGATCTATGTAGCCTGTGACTGCTGCTGCTG CTGCTGATGCATTTTGCTGTTGGATTGCGTTTGTTGGTCCTCTGGAAGTT GGGCGCAAGCGTCAGCAGTAGTTCGTCGAGGGGAGCCGCCGGGATTCGGC GTGGCTGGCACAGAGGTAGCGAACGAACGTGTTTTGAAAGGCGTTTTTAT AAAAGTCGTGCCATGTCGACGATCCATTTCATCCAGGAGCGATCAGAGCA TACATGTTGAGTCTGTCTGTTTTCTTCTGTTCTCGTCTTCTCTTTCATCG CATTCTCTCTTGTCTCGTGTGCTCTGATTGATCTCCCTCTTCCCGCACCC GTCCGTTTACATGAACACCCGCTCCGCTTCCCTTCGCCTTCACCCTTTTT TCACTGCCGCAGATCCTCCCCCGCGTGGTGGGAAACGTGGGCTTCATCTT CACCAACGGCGAGCTCGGCGACATCCGCGACGTGATCGAGGCGCACCGCG TGCCCGCCCCAGCCCGCGTGGGCTCCCTCGCGCCCATCGACGTTATGGTG CCCCCCGGCCCCACTGGCTGCGACCCCGGACAGACGTCCTTCTTCCAAGT GCTCCAGGTGAAGAAAACGAAAACACAAAACCTTTCGTTTTATGTTAGCT TTTTATTTTTTCCCAAACATCTACACGTACATAGGATACGTTTTTTTGTT TTTTTGTCGGTCCAGAGATAACAAAAAGGCTGCCTTGGACTGGCTGTATA CAACGAGGAAAGTTTAACGTTTCGAATCTGAATAGAGGCTCTTCAAAATG TAGTTTGTTGTCTCTATTATGTAAGTATGTTTCATGTACACACATGTGGC GCGAAAAAAACGGGCGTTCAGAATCCTTCTTTGTTTCTTGACATGTGTGT AGAGAGCACATGGCAAAGACTGCTTTTCGTGCATGTTTTTTCCTGCGAAA ATAAAGACCCCCCTAATCATATTTTTGATACACGGAACCCGCGATGTAGG ACCGATTCCGAGTTTTTTACTTGCTTTTGCCCGCCGCCGCCCTTGGGCCA CCTCCTTTGTTCAACCCGGCCCTTGCCTTTGCCCGTACATATCCGACCAA ACGAATCAAAAACACTTTTTTCTCCTTTGCCCGTACATATCCGACCAAAC AAATCAAAAATACTTTTTTTCTCCTTTGTATTGGCGTTATCACCAGGTGC CCACGAAGATTACCAAGGGTCAGATTGAGATCACCACGGAGGTGTTCCTT GTGCCCAAGGGCCAAAAGGTGCGCTGTCGATGCTGGTACTGTATCCTCGG TGGCATGGATTTGACGAACAGGTGGTCGGAGAGCAGGGTTCTCGAGCCCA CGAGTTGCCCGCCTGTGTAGGAAGGACGCAGTGGCCGATAGGGGGCATTT TTGTAGTTGGTTCATCTTAAGTGAAACGATGCGCACCGTTACATGGGGCG GAGTTTGCTTGCGTGCAAGCGTGTGCGTGTGCTGGCAGCGCTATTTACAC ATACATGCGTGTATGCAGAGCCGCCGCAGGTGTGTACCTGGCTTTTAAAA ATAAACAATGAATCAAAGATGGAACCTACCCCACACTAGAGCAAGGACTC GATATGGGGTTCAAACGGTATTCCATACAGTTACTTAATATTTGGCTTTT ATTTCGTGAAGCGATCGATTGCACACTTGCACGGCCACCTTCTCACCAAA CCGAACCCAACCCAACCCGACTTGCGTTTACCGACTCTCTTCTCTCTTTA CCCCCCCCCCCCCCCCCCCCCCCCCCGCTCTTTGTCTCCCCTTCCCCCTT CGCGCCGCCTTCCCCCCCCCNNNNNNNNNCCCCCCCACCCCACCCCCCCC CCCCCCCCCCCCCCCCCTGGCCTTTCCCAACCTCCTCCTCTTCTTCCCCC CCCCCCCCCCCTCGCCGCCCGCCGTTGTTGGACTCCGATTCCCCGTGCGC GCGCCCTTCCCCGCCCGCGCTCACGACTCGGCCGTGCCGCTGGTCTGCCG ACACCGACGATCCCACCTCACCTCAGGTGGGCAGCTCCGAGGCGGCGCTG CTGCAGAAGCTGAGCATTCGCCCCTTCACGTACGGCCTGGTGATCGACTG CGTGTACGACAACGGCTCCGTGTTCGACGCCGCGGTGCTCGACCTCACCG ACGCCGACCTGGCGAACAAGTTCTCGGCGGCGTGCGGCAACGTGGCGGCT GTCTGCCTGGAGATCGGCTTCCCCACGCTGGCGTCCCTGCCCCACTCCAT CGCCAACGCGTTCCGCGCGATGGTGGGCGTGGTGATCGAGGGCTGCGACA CCTACTCGTTCGACGCGGCCGACACCATCAAGGTGAGGCGTGTGGGGGCG GGGCGGCGACGTGCATGCGCGATCAGCTTGCAAGCTTTCGGTGGTGGGGT TTGGTATGCTGGGCCCACGCACGTGCGGGCATGGCTTTACGGCCGGGTTA GCGACAGCTCCGCGGCAGCGCTGCCGATCGATGCCTGTCGGGTAGGAAAA GGACGGACGTCCCCGTTGCCGCGTTTTTTCGTTGCACGGCCACGAGCGCT CCGGCGGCTCGGTTCGCTTCGCTCCGGATGCGATGGAGGCGCACTGTTTT GTCTAGTTTCGTTTCGGCAGCAGCGTTGCCAGCCTGCGGCATGATGAAAA TCCATGTGTGACGCACACGTCTCGTGTACAGTGCATCCCTGGCCGTGTCT CTGCCCCTTGTGTGGAACATGAGACGACTCTTTTCTTCTTCGATCCCCTC CCTTTCTCACGCTCCCGCCCCGTTCTGTTGTTTCCGTGTGTGCGTGCACG TTGTTTGCAGGCTATCCTGGCCGACCCGAGCGCCTTCGCGGCTGCCTCCG GCGGTGGCGGCGGCGGCGGTGACGCCCCTGCCGCCGCGGCTAAGGTGGAG GAGGAGGAAGAAGAGGAAGAGGTCGTGGGCGGCATGAGCATGTTCGGAGA GGAGGAGGGCGGCGGTGGCGACTACTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig527:32497..36574+

>mRNA_L-elsbetiae_contig527.13399.1 ID=mRNA_L-elsbetiae_contig527.13399.1|Name=mRNA_L-elsbetiae_contig527.13399.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1944bp|location=Sequence derived from alignment at L-elsbetiae_contig527:32497..36574+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCTCTCTCCCCGGAACGTAAGACATGGTACTTCGAGCGCCTGAAGGA
CCTGATCGACAACCACACCAAGATCTTCATGGTGCAGATGCCTCTCTCCC
CGGAACGTAAGACATGGTACTTCGAGCGCCTGAAGGACCTGATCGACAAC
CACACCAAGATCTTCATGGTGCAGGCCGACAACGTGGGGTCTAACCAGAT
GGCCAAGATCCGGTTCGCGCTCCGCGGCTCCGCCACGGTGCTCATGGGCA
AGAACACCATGATCCGCAAGATCATCAGCGTGTACATCAAGGACAACCCG
GGCCACCCCCTGGAGGCGGCCGACAACGTGGGGTCTAACCAGATGGCCAA
GATCCGGTTCGCGCTCCGCGGCTCCGCCACGGTGCTCATGGGCAAGAACA
CCATGATCCGCAAGATCATCAGCGTGTACATCAAGGACAACCCGGGCCAC
CCCCTGGAGGCGATCCTCCCCCGCGTGGTGGGAAACGTGGGCTTCATCTT
CACCAACGGCGAGCTCGGCGACATCCGCGACGTGATCGAGGCGCACCGCG
TGCCCGCCCCAGCCCGCGTGGGCTCCCTCGCGCCCATCGACGTTATGGTG
CCCCCCGGCCCCACTGGCTGCGACCCCGGACAGACGTCCTTCTTCCAAGT
GCTCCAGATCCTCCCCCGCGTGGTGGGAAACGTGGGCTTCATCTTCACCA
ACGGCGAGCTCGGCGACATCCGCGACGTGATCGAGGCGCACCGCGTGCCC
GCCCCAGCCCGCGTGGGCTCCCTCGCGCCCATCGACGTTATGGTGCCCCC
CGGCCCCACTGGCTGCGACCCCGGACAGACGTCCTTCTTCCAAGTGCTCC
AGGTGCCCACGAAGATTACCAAGGGTCAGATTGAGATCACCACGGAGGTG
TTCCTTGTGCCCAAGGGCCAAAAGGTGCCCACGAAGATTACCAAGGGTCA
GATTGAGATCACCACGGAGGTGTTCCTTGTGCCCAAGGGCCAAAAGGTGG
GCAGCTCCGAGGCGGCGCTGCTGCAGAAGCTGAGCATTCGCCCCTTCACG
TACGGCCTGGTGATCGACTGCGTGTACGACAACGGCTCCGTGTTCGACGC
CGCGGTGCTCGACCTCACCGACGCCGACCTGGCGAACAAGTTCTCGGCGG
CGTGCGGCAACGTGGCGGCTGTCTGCCTGGAGATCGGCTTCCCCACGCTG
GCGTCCCTGCCCCACTCCATCGCCAACGCGTTCCGCGCGATGGTGGGCGT
GGTGATCGAGGGCTGCGACACCTACTCGTTCGACGCGGCCGACACCATCA
AGGTGGGCAGCTCCGAGGCGGCGCTGCTGCAGAAGCTGAGCATTCGCCCC
TTCACGTACGGCCTGGTGATCGACTGCGTGTACGACAACGGCTCCGTGTT
CGACGCCGCGGTGCTCGACCTCACCGACGCCGACCTGGCGAACAAGTTCT
CGGCGGCGTGCGGCAACGTGGCGGCTGTCTGCCTGGAGATCGGCTTCCCC
ACGCTGGCGTCCCTGCCCCACTCCATCGCCAACGCGTTCCGCGCGATGGT
GGGCGTGGTGATCGAGGGCTGCGACACCTACTCGTTCGACGCGGCCGACA
CCATCAAGGCTATCCTGGCCGACCCGAGCGCCTTCGCGGCTGCCTCCGGC
GGTGGCGGCGGCGGCGGTGACGCCCCTGCCGCCGCGGCTAAGGTGGAGGA
GGAGGAAGAAGAGGAAGAGGTCGTGGGCGGCATGAGCATGTTCGGAGAGG
AGGAGGGCGGCGGTGGCGACTACTAGGCTATCCTGGCCGACCCGAGCGCC
TTCGCGGCTGCCTCCGGCGGTGGCGGCGGCGGCGGTGACGCCCCTGCCGC
CGCGGCTAAGGTGGAGGAGGAGGAAGAAGAGGAAGAGGTCGTGGGCGGCA
TGAGCATGTTCGGAGAGGAGGAGGGCGGCGGTGGCGACTACTAG
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