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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 257 |
| Cds size | 255 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816543.2429297-CDS-L-elsbetiae_contig5269:5001..5114 | 1622816543.2429297-CDS-L-elsbetiae_contig5269:5001..5114 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5269 5002..5114 - |
| 1691683635.48739-CDS-L-elsbetiae_contig5269:5001..5114 | 1691683635.48739-CDS-L-elsbetiae_contig5269:5001..5114 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5269 5002..5114 - |
| 1622816543.2551322-CDS-L-elsbetiae_contig5269:7035..7177 | 1622816543.2551322-CDS-L-elsbetiae_contig5269:7035..7177 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5269 7036..7177 - |
| 1691683635.5017915-CDS-L-elsbetiae_contig5269:7035..7177 | 1691683635.5017915-CDS-L-elsbetiae_contig5269:7035..7177 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5269 7036..7177 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5269.13396.1 >prot_L-elsbetiae_contig5269.13396.1 ID=prot_L-elsbetiae_contig5269.13396.1|Name=mRNA_L-elsbetiae_contig5269.13396.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=85bp
GSAARGGERWPAVAALSAFGGVGDGGDGAAGLVWVPAHASFSPPPPHGAA
VAAATATPRGVARPLPPSPPKPAAERAAEPVPAER back to topmRNA from alignment at L-elsbetiae_contig5269:5001..7177- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5269.13396.1 ID=mRNA_L-elsbetiae_contig5269.13396.1|Name=mRNA_L-elsbetiae_contig5269.13396.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2177bp|location=Sequence derived from alignment at L-elsbetiae_contig5269:5001..7177- (Laminarionema elsbetiae ELsaHSoW15)
GGGTCTGCAGCGAGGGGCGGAGAACGTTGGCCGGCAGTCGCCGCCCTCTC
CGCGTTCGGCGGCGTCGGGGACGGCGGAGATGGGGCAGCAGGGCTCGTCT
GGGTCCCGGCGCACGCATCATTCTCACCACCGCCACCGCACGGTCAGTTT
TTTTGTTCGCCGGTTCGGTGCTGTCTGTCATGTCGTCAGCGTGTTACCGA
AATCCGCTCTAAGAACCCCCCCCCCCCCCCCCCCCGGCCCCCCTTCGCCG
GGGCGGCCTTTGTTTTTTCTTTAGTNNNNNNNNNNCCGCCCAGTGTGGTT
TTTTTGGTGGCCGGGGAGGGGGGGCCTGCCCTGCGCGGCCGCGTGGGCCC
AACCCCCCCCCAGGCCCCCCCCCCCCCCCCCCCCCGGCACGCTTTCGGCC
GGGAAGCTTTTGATATCTCTTAAGTTCCCCTCGTGCGGGGGGGGGTGAAA
TATAAACCAGCGAATCAAAAATGGAAACTTTAGGGGGTTGTTTTTTTCAC
TAAAAATCACCCCCCCCCCCCCCCCCTTCCCGGGGCTAATTTAGATCGGA
CTACGGTAACTTGATGTCGTTCGGCTTGAGTGTGTGGTATGCTTGTGCTT
GTGTGTGTATTCGTTTGTACGTGTGTTGTCTCTGGTGTTTTACCTATTTT
AGGCGTAAATAGGTGGGGGCGGGGCCGGGGCCGGGGGGCTAAACCTAACT
TTGTGATCTTGTTGGCGTCCTTCCAAGTATTTATTGTTTTCTTCTTCTTT
CGTCTGGCCTCCTCTGCGCGAGATTGTCTACCCCGTGTGCGCGCGTGCGC
GCGAGCCCCCCCCCCCTTGTCCACCCCTTCCTTTCATTGTGGACCGCCTG
GGCTGCTTGCTGCCCCGGTGGGGCGTGTATTCATGCTTTCGGACGGGGTT
GCCCCCGCCCTCCGATCAGATCACCGTGCGAAGTACGGACATATTGTTGT
ACACGTGCGCTTTTGTGACCACGGGCCGTTAGTTGCTAGATTTTTGGGAT
TATGTAGCAATCTCGATTATACGAGCTAACGCTCTAATGTGAAGAAAAAA
ACAAAAACGAACGACTTGCTTCGCAGACCGGACTTACAGTAGACAGCTGA
CATTTGTATACATGAATTAAAAAACAATGTATGTACATCTGTGTAGCGCA
CTTTCGAGCACACTCCGTGACGTTTGGGAGGCGCGTTTTCTAGCTCGGCT
GGAGAGCCCCAGGGCCAACAGAACTGCGTGTAGATGCCTCGGGGAAACCC
CGCGCGGGGACCGGGGACAGCGGTTCGAAACCATTTAGATTTACGACGCA
CTGGATTTGGGTAGGTAGTATTATTTTATTTTTCAGTAGTCTAAAGCCTT
TGAGGGTAAGTTATCCTGTGACCACGGGAATTGACCGCGTCAGTGTTTGG
ACTAGTACACGGACTCATGGAGGTGTACTGGATAGAGAGATCGGAACGGT
TTTTGATGTGAAGATAACACATAGTATAGTGCGGGCTCTCTGTCTTGCCA
GGCGTACATACGTGCGTGCACGGTAGGTGACACAAGATACCATACCCTCT
GGACCGGCTTTCAGAGCTGCAGTACTCCGTGACGAATAGGGTGCCGGCAC
CCCAAACGGCACGTTTTCGGGCAGCCCTCGACTAGATCTTTCCAGCGCCA
CCCCCTTTCGGCAACTGCTGTCACTCTTCTTGGTGGGAAGGATTTTTTTT
TTTTTCACCCATTGCTTCGAAAAATTATCTAGGTGTGTGGCATCTCATGT
CACCTACGGTGCATGCGTGTGTGTGCATGCCGCCTACATGTTAGTGCTAC
GTGTTGCTCCAAGAAATCGGCCCCCTGTGTCGACAAAGCCAAGTAAACCG
ACGTCGCTCTCAAGTTTGTCTCATCGGCCGGCCGAAACCCAAACGCCGGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCGCACCAGACGCCCCGCCCGCAC
CCCCCCCCCCCCCCCCGACCGAGACNNNNNNNNNNCGCCCCCGCTCCCCA
TTTTGCCCCCCCCCCCCCCCCAAACCCACCCCCCCCGCCCCCCCCCCCCC
CCCCCGATTACAGGTGCTGCCGTCGCAGCAGCAACCGCCACCCCCCGCGG
CGTGGCAAGGCCACTACCACCATCACCACCAAAACCCGCCGCTGAACGAG
CTGCAGAGCCAGTACCAGCTGAGCGCC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5269:5001..7177- >mRNA_L-elsbetiae_contig5269.13396.1 ID=mRNA_L-elsbetiae_contig5269.13396.1|Name=mRNA_L-elsbetiae_contig5269.13396.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=510bp|location=Sequence derived from alignment at L-elsbetiae_contig5269:5001..7177- (Laminarionema elsbetiae ELsaHSoW15)
GGGTCTGCAGCGAGGGGCGGAGAACGTTGGCCGGCAGTCGCCGCCCTCTC
CGCGTTCGGCGGCGTCGGGGACGGCGGAGATGGGGCAGCAGGGCTCGTCT
GGGTCCCGGCGCACGCATCATTCTCACCACCGCCACCGCACGGGGTCTGC
AGCGAGGGGCGGAGAACGTTGGCCGGCAGTCGCCGCCCTCTCCGCGTTCG
GCGGCGTCGGGGACGGCGGAGATGGGGCAGCAGGGCTCGTCTGGGTCCCG
GCGCACGCATCATTCTCACCACCGCCACCGCACGGTGCTGCCGTCGCAGC
AGCAACCGCCACCCCCCGCGGCGTGGCAAGGCCACTACCACCATCACCAC
CAAAACCCGCCGCTGAACGAGCTGCAGAGCCAGTACCAGCTGAGCGCGTG
CTGCCGTCGCAGCAGCAACCGCCACCCCCCGCGGCGTGGCAAGGCCACTA
CCACCATCACCACCAAAACCCGCCGCTGAACGAGCTGCAGAGCCAGTACC
AGCTGAGCGC back to top
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