mRNA_L-elsbetiae_contig5246.13365.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: A0A6H5K785_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K785_9PHAE) HSP 1 Score: 465 bits (1196), Expect = 2.910e-162 Identity = 248/315 (78.73%), Postives = 253/315 (80.32%), Query Frame = 1 Query: 1 MPIGEDPRHGLLVALVVALVGVLLLIFAALAVAPVLVIVLGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQ-----------------------------------------------------------LHRSRIGRAPNFRSSVESSTMLHSNVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPINLHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAHKD 768 MP+GEDPRHGLLVALVV LVGVLLLIFAALAVAPVLVIVLGLMTYV+WWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTF+VHSYDRQ LHRSRIGRAPNFR SVESSTMLHS+VQDKCRRIS+CLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPINLHRTRLLNVLAD RISDLNVTSRALVLDALQQLKLSAHKD Sbjct: 1 MPMGEDPRHGLLVALVVGLVGVLLLIFAALAVAPVLVIVLGLMTYVVWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFSVHSYDRQHDEIRSLELGVGRSLASVSDSGAWVPADYPSVRASRPLGGPCPSSAHTRRPRRARSGSQLHRSRIGRAPNFRPSVESSTMLHSSVQDKCRRISLCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPINLHRTRLLNVLADNRISDLNVTSRALVLDALQQLKLSAHKD 315
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: D7G3Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z8_ECTSI) HSP 1 Score: 492 bits (1266), Expect = 1.830e-158 Identity = 248/256 (96.88%), Postives = 253/256 (98.83%), Query Frame = 1 Query: 1 MPIGEDPRHGLLVALVVALVGVLLLIFAALAVAPVLVIVLGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESSTMLHSNVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPINLHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAHKD 768 MP+GEDPRHGLLVALVV LVGVLLLIFAALAVAPVLVIVLGLMTYV+WWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTF+VHSYDRQLHRSRIGRAPNFR SVESSTMLHS+VQDKCRRIS+CLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPINLHRTRLLNVLAD RISDLNVTSRALVLDALQQLKLSAHKD Sbjct: 1 MPMGEDPRHGLLVALVVGLVGVLLLIFAALAVAPVLVIVLGLMTYVVWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFSVHSYDRQLHRSRIGRAPNFRPSVESSTMLHSSVQDKCRRISLCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPINLHRTRLLNVLADNRISDLNVTSRALVLDALQQLKLSAHKD 256
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: A0A2P4YCM6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YCM6_9STRA) HSP 1 Score: 180 bits (456), Expect = 7.370e-51 Identity = 109/258 (42.25%), Postives = 157/258 (60.85%), Query Frame = 1 Query: 16 DPRHGLLVALVVALVGVL--LLIFAALAVAPVLVIV-LGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESST----MLHSNVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPI--NLHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAH 762 +P + LV + + GVL LL+ A A AP+L LG+M YVI Y+S E H AQE ENRFWT AF FS A++++ DSP+A+GQW+ LG + V FT +VH +DR LHR I R P + + + + ++K + C+S++D + + +N+ML V+ E +I IL+ A ELNY+L I L LLFYKVKDH+ + + RT +L++L TR++DL+V SRAL+LDAL +K+SAH Sbjct: 51 EPANSALVLVGMIFFGVLVALLVMAFFAYAPLLCASWLGIM-YVIGLYLSTESNWRWHDAQEFENRFWTGTAFMFSAAVLYIKDSPLAVGQWNSTLGLVLVFGFTMSVHFFDRFLHRQEISRRPRLKEATRQFSHKLFKYKATAEEKTNLVMECVSRIDRHYLPSTINNMLNLAEVKRRELKIFRILAGAGKDELNYILNHIRLALLFYKVKDHSKVREDQSRTLILDLLCTTRLADLSVMSRALLLDALMVMKISAH 307
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: A0A7S0FB27_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A7S0FB27_9STRA) HSP 1 Score: 181 bits (459), Expect = 2.720e-49 Identity = 104/254 (40.94%), Postives = 150/254 (59.06%), Query Frame = 1 Query: 22 RHGLLVALVVALVGVLLLIFAALAVAPVLVIVLGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESSTMLHS------NVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPIN-LHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAH 762 R ++ L+ LVG+LLL A + APV + Y ++ +V+ E+++ +HHAQE ENRFWT +A FS AL F DSP A+G WSP +GF V+ + VH+YDR LHR + R R ++T L+ V+++ I CLS +D L+ + +N+++ + E+EI+ I D +P LNY++ + LGLLFYKVKDH + HR+ L+ L TRIS LNV S+ VL ALQ LKL A+ Sbjct: 22 RVAAMLLLLTLLVGILLLFLAFFSFAPVFCSCTLSLLYTLYLFVAYEESN-IHHAQEFENRFWTILALLFSTALFFAKDSPFAIGNWSPSIGFTLVISIGYGVHAYDRYLHRQELIREHGLRRGSSAATSLNRLKALGIPVEEQLDTIHSCLSDIDQLLIPSTINNIINLRFILKKEREIIQIFEDVEPKALNYLVQHVRLGLLFYKVKDHRNFSGKHRSELIECLCVTRISALNVLSKVFVLHALQMLKLPAN 274
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: A0A662X9P1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9P1_9STRA) HSP 1 Score: 181 bits (458), Expect = 3.360e-48 Identity = 109/260 (41.92%), Postives = 158/260 (60.77%), Query Frame = 1 Query: 16 DPRHGLLVALVVALVGVLL--LIFAALAVAPVLVIV-LGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESSTMLHS------NVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPI--NLHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAH 762 +P LV + + GVLL ++ A A AP+L LG+M YVI Y+S E H AQE ENRFWT AF FS A++++ DSP+A+GQW+ LG + V FT +VH +DR LHR I R P + + H+ ++K + + C+S++D + + +N+M+ V+ E +I IL+ A ELN++L I L LLFYKVKDH+ + + RT +L++L TR++DL+VTSRAL+LDAL +KLSAH Sbjct: 52 EPMSNALVLVGMLFFGVLLALVVMAFFAYAPLLCASWLGIM-YVIGLYLSTESNWRWHDAQEFENRFWTGTAFLFSAAVLYIKDSPLAVGQWNSTLGLVLVFSFTMSVHYFDRFLHRQEISRRPRLNTEETARQFSHNLFQYKATAEEKTKLVMQCVSRIDRHYLPSTINNMINLAEVKRRELKIFRILAGAAKDELNFILNHIRLALLFYKVKDHSKVREDQSRTLILDLLCTTRLADLSVTSRALLLDALMVMKLSAH 310
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: A0A225WYB2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WYB2_9STRA) HSP 1 Score: 178 bits (452), Expect = 2.130e-47 Identity = 108/259 (41.70%), Postives = 158/259 (61.00%), Query Frame = 1 Query: 13 EDPRHGLLVALVVALVGVLL--LIFAALAVAPVLVIV-LGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESST----MLHSNVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPI--NLHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAH 762 ++P + LV + + GVLL +I A A AP+L LG+M YVI Y+S E H AQE ENRFWT AF FS A++++ DSP+A+GQW+ LG + V FT +VH +DR LHR I R P + + + + ++K + + C++++D + + +N+ML V+ E +I IL+ A ELNY+L I L LLFYKVKDH+ + + RT +L++L TR+ DL+V SRAL+LDAL +K+SAH Sbjct: 44 KEPANSALVLVGMIFFGVLLALVIMAFFAYAPLLCASWLGIM-YVIGLYLSTESNWRWHDAQEFENRFWTGTAFMFSAAVLYIKDSPLAVGQWNSTLGLVLVFGFTMSVHFFDRFLHRQEISRRPRLKEAARQFSHNLFKYKATAEEKTKLVMECVNRIDRHYLPSTINNMLNLAEVKRRELKIFRILAGAAKDELNYILNHIRLALLFYKVKDHSKVREDQSRTLILDLLCTTRLPDLSVMSRALLLDALMVMKISAH 301
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: A0A8K1FIM4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIM4_PYTOL) HSP 1 Score: 178 bits (451), Expect = 2.900e-47 Identity = 94/235 (40.00%), Postives = 145/235 (61.70%), Query Frame = 1 Query: 70 LLIFAALAVAPVLVIVLGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESSTMLH--SNVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPI--NLHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAH 762 LLI A A+AP L + Y++ Y++ E + H AQE ENRFWT AF FS A++++HDSP+A+G+W+ +G V+ FT VH DR +HR I R P ++ + ++K ++ C++++D + + +N+M+ V+ E+EI +LSDA ELNY++ I L LLFYKVKDH+ + + RT +L++L R++DL VTSRA++LDAL +K+SAH Sbjct: 74 LLIMAFFAMAPFLCGSWLALMYMVGLYLTTESDWWWHDAQEFENRFWTMTAFLFSTAVLYIHDSPLAIGRWNSSIGMFLVVSFTSGVHFLDRFIHRQEISRKPRLNPGIQQPELFKHKETAEEKANIVTECVARIDRMYLPSTINNMINLGQVKLQEQEIFRVLSDASKDELNYIINNIRLALLFYKVKDHSKLRSDQSRTLILDLLCSGRLADLTVTSRAILLDALMVMKISAH 308
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: A0A2D4C4B6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4B6_PYTIN) HSP 1 Score: 177 bits (449), Expect = 5.310e-47 Identity = 105/252 (41.67%), Postives = 157/252 (62.30%), Query Frame = 1 Query: 34 LVALVVALVGVLLLIFAALAVAPVLVIV-LGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESSTMLH-----SNVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPINL---HRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAH 762 LVALV + V LL+ A A AP+L + LGL+ Y++ Y+S E H AQE ENRFWT AF FS A++++ DSP+ALG+W+ G L V+ FT VH DR LHR I R P R +V++S H ++K + ++ ++++D + + +N+ML V+ E+ I +LS++ ELNY++ + L L+FYKVKDH+ + RTR+L++L R++DL +TSRA++LDAL +KLSAH Sbjct: 77 LVALVFVTLLVALLVMAFFAFAPLLCVTSLGLL-YLVGLYLSTESNWRWHDAQEFENRFWTLTAFLFSTAVLYIQDSPIALGRWNATFGMLLVVSFTSGVHFLDRFLHRKEISRKP--RLNVDASLPQHLVKVKETAEEKAKLVTDSVARIDRMYLPSTINNMLNLAQVKAQEQTIFRVLSESSKDELNYIINNVRLALVFYKVKDHSATSRPDQSRTRILDLLCSQRLADLTITSRAILLDALMVMKLSAH 325
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: A0A329SZS0_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SZS0_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.150e-46 Identity = 111/259 (42.86%), Postives = 162/259 (62.55%), Query Frame = 1 Query: 13 EDPRHGLLVALVVALVGVLL-LIFAAL-AVAPVLVIV-LGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSV-ESSTMLH---SNVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPI--NLHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAH 762 +P LV + V +GVLL L+F A A AP+L LG++ YVI Y+S E H AQE ENRFWT AF FS A++++ DSP+A+GQWS LG + V FT +VH +DR LHR +I R P + + + ST L + ++K + + C+S++D + + +N+M+ V+ E +I IL+ A ELNY+L L LLFYKVKDH+ + + RT +L++L TR++DL+V SRA++LDAL +K+SAH Sbjct: 37 NEPATSALVLVAVIFLGVLLTLVFMAFFAYAPLLCASWLGIL-YVIGLYLSTESKWRWHDAQEFENRFWTGTAFMFSAAVLYIKDSPLAVGQWSSSLGLVLVFGFTSSVHYFDRFLHRQKISRRPRLKLTTRQMSTNLFKYKATAEEKTQLVMECVSRIDRHYLPSTINNMINFAEVKRRELKIFRILAGAGKDELNYILNHTQLALLFYKVKDHSNVREDQSRTLILDLLCTTRLADLSVMSRAVLLDALMVMKISAH 294
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: H3H5B0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5B0_PHYRM) HSP 1 Score: 175 bits (444), Expect = 2.190e-46 Identity = 106/259 (40.93%), Postives = 157/259 (60.62%), Query Frame = 1 Query: 13 EDPRHGLLVALVVALVGVLL--LIFAALAVAPVLVIV-LGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESST----MLHSNVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPI--NLHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAH 762 +P + LV + + VGVLL ++ A A AP+L LG+M YVI Y+S E H AQE ENRFWT AF FS A++++ DSP+A+GQW+ LG + V FT +VH +DR LHR I R P + + + + ++K + + + +D + + +N+M+ V+ E +I IL+ A+ ELNY+L I L LLFYKVKDH+ + + RT +L++L TR++DL+V SRAL+LDAL +K+SAH Sbjct: 46 SEPANSALVLVGMLFVGVLLALVVMAFFAYAPLLCASWLGIM-YVIGLYLSTESKWRWHDAQEFENRFWTGTAFMFSAAVLYIKDSPLAVGQWNSTLGLVLVFGFTMSVHFFDRFLHRQEISRRPRLKEAARQFSHNLFKYKATAEEKTKLVMESVGSIDRHYLPSTINNMINLAEVKRRELKIFRILAGAERDELNYILNHIRLALLFYKVKDHSKVREDQSRTLILDLLCTTRLADLSVMSRALLLDALMVMKISAH 303 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5246.13365.1 >prot_L-elsbetiae_contig5246.13365.1 ID=prot_L-elsbetiae_contig5246.13365.1|Name=mRNA_L-elsbetiae_contig5246.13365.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=256bp MPIGEDPRHGLLVALVVALVGVLLLIFAALAVAPVLVIVLGLMTYVIWWYback to top mRNA from alignment at L-elsbetiae_contig5246:8840..12212+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5246.13365.1 ID=mRNA_L-elsbetiae_contig5246.13365.1|Name=mRNA_L-elsbetiae_contig5246.13365.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3373bp|location=Sequence derived from alignment at L-elsbetiae_contig5246:8840..12212+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5246:8840..12212+ >mRNA_L-elsbetiae_contig5246.13365.1 ID=mRNA_L-elsbetiae_contig5246.13365.1|Name=mRNA_L-elsbetiae_contig5246.13365.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1536bp|location=Sequence derived from alignment at L-elsbetiae_contig5246:8840..12212+ (Laminarionema elsbetiae ELsaHSoW15)back to top |