mRNA_L-elsbetiae_contig5213.13318.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5213.13318.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 105 bits (261), Expect = 3.090e-27 Identity = 47/62 (75.81%), Postives = 53/62 (85.48%), Query Frame = 2 Query: 62 RIRCLDAFITALSQVCDGGEQRWYASTLELQLVSLELCCACRSVPTLHVRIHHQTPRSLWSP 247 R +CLDAF+ AL+Q CDG E+RWYASTLELQLVSLE C ACR VPTLHVR+ +TPRSLWSP Sbjct: 38 RSKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSP 99
BLAST of mRNA_L-elsbetiae_contig5213.13318.1 vs. uniprot
Match: D7G3G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G0_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 1.030e-24 Identity = 45/62 (72.58%), Postives = 49/62 (79.03%), Query Frame = 2 Query: 47 MTAEGRIRCLDAFITALSQVCDGGEQRWYASTLELQLVSLELCCACRSVPTLHVRIHHQTPR 232 M EGR +CLDAFI AL+Q CDG E RWYASTLELQLVSL+ C ACR PTLHVR+ QTPR Sbjct: 1 MNLEGRRKCLDAFIVALNQTCDGRENRWYASTLELQLVSLKFCGACRRFPTLHVRVDRQTPR 62
BLAST of mRNA_L-elsbetiae_contig5213.13318.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 103 bits (257), Expect = 2.470e-24 Identity = 48/63 (76.19%), Postives = 52/63 (82.54%), Query Frame = 2 Query: 59 GRIRCLDAFITALSQVCDGGEQRWYASTLELQLVSLELCCACRSVPTLHVRIHHQTPRSLWSP 247 GR CL AFI AL+Q C+G E+RWYASTLELQLVSLE C ACR VPTLHVR+ QTPRSLWSP Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSP 75
BLAST of mRNA_L-elsbetiae_contig5213.13318.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 101 bits (251), Expect = 5.130e-23 Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 2 Query: 47 MTAEGRIRCLDAFITALSQVCDGGEQRWYASTLELQLVSLELCCACRSVPTLHVRIHHQTPRSLWSP 247 MT +G +CLDAF+ AL+Q CDG E+RWY STLELQLVSLE+C ACR V TLHVR+ QTP SLW P Sbjct: 1 MTTKGNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFP 67
BLAST of mRNA_L-elsbetiae_contig5213.13318.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 100 bits (250), Expect = 6.750e-23 Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 2 Query: 56 EGRIRCLDAFITALSQVCDGGEQRWYASTLELQLVSLELCCACRSVPTLHVRIHHQTPRSLWSP-LARTEINT 271 E R RCLDAF+ ALSQ C+GGE+RWYASTLELQL SL+LC ACR+ LHV + QTPRSLWS A+T NT Sbjct: 6 EWRTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNT 78
BLAST of mRNA_L-elsbetiae_contig5213.13318.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 1.280e-22 Identity = 44/67 (65.67%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 47 MTAEGRIRCLDAFITALSQVCDGGEQRWYASTLELQLVSLELCCACRSVPTLHVRIHHQTPRSLWSP 247 M EG R DAF ALSQ C+GGE+RWY ST ELQL SL++C ACRS PTLHVR+ TP SLWSP Sbjct: 1 MPTEGYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSP 67
BLAST of mRNA_L-elsbetiae_contig5213.13318.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 3.270e-20 Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 2 Query: 47 MTAEGRIRCLDAFITALSQVCDGGEQRWYASTLELQLVSLELCCACRSVPTLHVRIHHQTPRSLWS 244 MT+E + RCLDAF+ ALSQ +GGE+RWY STL+LQL SLE C ACRS P LHV + +TP +LWS Sbjct: 1 MTSEAQRRCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWS 66
BLAST of mRNA_L-elsbetiae_contig5213.13318.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 4.120e-19 Identity = 43/63 (68.25%), Postives = 46/63 (73.02%), Query Frame = 2 Query: 59 GRIRCLDAFITALSQVCDGGEQRWYASTLELQLVSLELCCACRSVPTLHVRIHHQTPRSLWSP 247 GR CLDAFI AL Q DG +RWY STLELQLVSLE C ACRS + V+IH QTP SLWSP Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSP 87
BLAST of mRNA_L-elsbetiae_contig5213.13318.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 2.180e-17 Identity = 40/63 (63.49%), Postives = 44/63 (69.84%), Query Frame = 2 Query: 56 EGRIRCLDAFITALSQVCDGGEQRWYASTLELQLVSLELCCACRSVPTLHVRIHHQTPRSLWS 244 EG LD I AL+Q CDG E+RWY STLELQLVSLELC ACRS LHV + TP +LWS Sbjct: 84 EGGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWS 146
BLAST of mRNA_L-elsbetiae_contig5213.13318.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 4.360e-17 Identity = 41/69 (59.42%), Postives = 48/69 (69.57%), Query Frame = 2 Query: 47 MTAEGRIRCLDAFITALSQVCDGGEQRWYASTLELQLVSLELCCACRSVPTLHVRIHHQTPRSLWSPLA 253 M +EG R DA I A+SQ +G +RWY STLEL+L SLE C ACR VPT+HVR+ TP SLWSP A Sbjct: 1 MDSEGASRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHA 69 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5213.13318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5213.13318.1 >prot_L-elsbetiae_contig5213.13318.1 ID=prot_L-elsbetiae_contig5213.13318.1|Name=mRNA_L-elsbetiae_contig5213.13318.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=87bp PDTLPITSSTAKQGNHDCRRKNPVPRCLHYCLEPSMRRRGAALVCVYSRAback to top mRNA from alignment at L-elsbetiae_contig5213:5117..9543+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5213.13318.1 ID=mRNA_L-elsbetiae_contig5213.13318.1|Name=mRNA_L-elsbetiae_contig5213.13318.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4427bp|location=Sequence derived from alignment at L-elsbetiae_contig5213:5117..9543+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5213:5117..9543+ >mRNA_L-elsbetiae_contig5213.13318.1 ID=mRNA_L-elsbetiae_contig5213.13318.1|Name=mRNA_L-elsbetiae_contig5213.13318.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=522bp|location=Sequence derived from alignment at L-elsbetiae_contig5213:5117..9543+ (Laminarionema elsbetiae ELsaHSoW15)back to top |