mRNA_L-elsbetiae_contig52.13288.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig52.13288.1 vs. uniprot
Match: A0A6H5L2B6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2B6_9PHAE) HSP 1 Score: 380 bits (976), Expect = 2.320e-124 Identity = 186/239 (77.82%), Postives = 207/239 (86.61%), Query Frame = 3 Query: 228 NSKLMASLFVGAFFLVFVFGARRIKAMVLKMREGPISIKVLSYIAGIMLVVTGFFSFFGSFFTLHPVDAVVHLYMFVFGWGILLLEAKSQILPKKIVENIHKYCAFTTVVWGRGAFFIFVGTLSLAQWVFIDIVMGLYLVGVGAGMIYWGQEAYKNLDALHGEMKDPQTVSDIFNKFDHNHDGSLNVTEMGNLLESLGAMLRPTEVEAAIIIMDQDNDGKVTLAEFQAWWAKSSAPEIV 944 NSKLMA+ GA A +IK MVL MR+GP+SIK+LSYIAGI+LVVTGFFSFFGSFFTLHP+DAVVHLYMF FGW ILLLEA+S ILPKKIV IHKYCAFTTVVWGRGAFFIF+GTL+LAQWVFI IV+GLYLV +GAGMIYWGQEAYKNLDALHGEMK+P V +F KFDHN+DG L+VTEMGNLLESLGAM+RPTEVEAA IIMD DNDGK++LAEFQ WWA S +PE+V Sbjct: 23 NSKLMATAVAGAAMEAAKTEATKIKNMVLNMRDGPVSIKILSYIAGILLVVTGFFSFFGSFFTLHPIDAVVHLYMFAFGWAILLLEARSSILPKKIVHKIHKYCAFTTVVWGRGAFFIFIGTLALAQWVFISIVLGLYLVIIGAGMIYWGQEAYKNLDALHGEMKNPAVVEGMFRKFDHNNDGVLDVTEMGNLLESLGAMMRPTEVEAACIIMDTDNDGKISLAEFQGWWANSPSPEVV 261
BLAST of mRNA_L-elsbetiae_contig52.13288.1 vs. uniprot
Match: A0A7S2DI40_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DI40_9STRA) HSP 1 Score: 135 bits (339), Expect = 5.590e-32 Identity = 72/204 (35.29%), Postives = 117/204 (57.35%), Query Frame = 3 Query: 321 REGPISIKVLSYIAGIMLVVTGFFSFFGSFFTLHPVDAVVHLYMFVFGWGILLLEAKSQILPKKIVENIHKYCAFTTVVWGRGAFFIFVGTLSLAQWV-FIDIVMGLYLVGVGAGMIYWGQEAYKNLDALHGEMKDPQTVSDIFNKFDHNHDGSLNVTEMGNLLESLGAMLRPTEVEAAIIIMDQDNDGKVTLAEFQAWWAKSS 929 +EGP++ KVL I G+ + V+G FG F+ P+ AV+ YM +FG I+++E + P + E + + F V+ GRGAF++F+GTL L QW F D+++G+Y+V G A L+A+ G + D +V++ F D +++G+LN E+ L ++LG+ L E+ A I +D+D G V EF WW K++ Sbjct: 44 QEGPLTFKVLCLIGGVCMTVSGVLGLFGVLFS--PLHAVIEGYMCIFGVMIIMMEGSKYLCPINLKETVLREAKFLAVLNGRGAFYVFLGTLLLTQWPNFFDVLIGIYMVXXXXXXXXXGTVAKAKLNAMAGHLTDENSVNEAFKAVDVDNNGALNYDELAVLCQNLGSKLTKEELAACIQDLDKDGSGVVEYTEFFDWWKKTA 245
BLAST of mRNA_L-elsbetiae_contig52.13288.1 vs. uniprot
Match: A0A0L0FU12_9EUKA (EF-hand domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FU12_9EUKA) HSP 1 Score: 112 bits (279), Expect = 1.510e-24 Identity = 66/193 (34.20%), Postives = 102/193 (52.85%), Query Frame = 3 Query: 372 LVVTGFFSFFGSFFTLHPVDAVVHLYMFVFGWGILLLEAKSQILPKKIVENIHKYCAFTTVVWGRGAFFIFVGTLSLAQWVFIDIVMGLYLVGVGAGMIYWGQEAYKNLDALHGEMKDPQTVSDIFNKFDHNHDGSLNVTEMGNLLESLGAMLRPTEVEAAII-----------IMDQDNDGKVTLAEFQAWW 917 ++ FF + + L P+ V++ Y FG+ IL LE + +PK V + F T + GR F+IFVGTL LAQW ++ ++ G L+ G M+ G A K L++L EM DPQ V + F D + +G+L+ E+ L SLG +L E+E A++ ++D ++DG V+ EF WW Sbjct: 1 MIFVSFFEIWINLIRLSPITMVIYAYCVFFGFVILALEVSPRFMPKSWVVAVRTNALFLTRLHGRAFFYIFVGTLMLAQWHWMQMMSGGLLIFTGIVMMISGGVANKKLNSLKREMTDPQEVRENFYAHDLDGNGALDTKEVAALCASLGTVLSRVELERALMCPSNNSLTFQQLLDSNHDGMVSYEEFYNWW 193
BLAST of mRNA_L-elsbetiae_contig52.13288.1 vs. uniprot
Match: A0A835YVM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM7_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.680e-22 Identity = 55/199 (27.64%), Postives = 104/199 (52.26%), Query Frame = 3 Query: 321 REGPISIKVLSYIAGIMLVVTGFFSFFGSFFTLHPVDAVVHLYMFVFGWGILLLEAKSQILPKKIVENIHKYCAFTTVVWGRGAFFIFVGTLSLAQWVFIDIVMGLYLVGVGAGMIYWGQEAYKNLDALHGEMKDPQTVSDIFNKFDHNHDGSLNVTEMGNLLESLGAMLRPTEVEAAIIIMDQDNDGKVTLAEFQAWW 917 ++G + +++ + GI ++ G FG L+ + A+ +Y+ FG I+ LE + ++++ F T+VWGRG F+++VG+L W +++G +G MI +G+ A L + G+ + + F+ FD N +L E+ L +GA+L E+E A++++D++ +GK+ EF AWW Sbjct: 55 KDGNVHLRLAAVFMGIWMLGLGLVYAFGESLRLNCLTAMYRMYLAFFGAFIIALETRGPFNYLLRTWRVYEFARFLTLVWGRGIFYLYVGSLCFQVWDLPGVLLGSATCLIGLCMIVYGRSATVKLQYMQGQFTTEKDLRRAFDAFDVNRSAALEPAELAALCREMGALLTRAELETALLMLDRNANGKIEFDEFAAWW 253
BLAST of mRNA_L-elsbetiae_contig52.13288.1 vs. uniprot
Match: A0A7S1YV34_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YV34_TRICV) HSP 1 Score: 107 bits (267), Expect = 3.660e-22 Identity = 62/213 (29.11%), Postives = 107/213 (50.23%), Query Frame = 3 Query: 288 ARRIKAMVLKMREGPISIKVLSYIAGIMLVVTGFFSFFGSFFTLHPVDAVVHLYMFVFGWGILLLEAKS---QILPKKIVENIHKYCAFTTVVWGRGAFFIFVGTLSLAQWVFIDIVMGLYLVGVGAGMIYWGQEAYKNLDALHGEMKDPQTVSDIFNKFDHNHDGSLNVTEMGNLLESLGAMLRPTEVEAAIIIMDQDNDGKVTLAEFQAWW 917 A R++ M EGP+S KV++++AGI+++ T F ++P VV Y+ + +++LE + +I+ KK + IH F V GRGAF+ F G L W F++++ G ++ +G+ + G+ L L + D + +F + D + DG + V + L+ +L E AA MD D+ GKV+ +F+ WW Sbjct: 52 ASRVRTMA---EEGPLSFKVMAFLAGILMIATSVLDFLNGLLHINPTHVVVAAYVCGSAFVMIILEGRGFIPEIVIKKFQDPIHDNAKFLRYVSGRGAFYFFAGLLQFGHWSFLNMISGGVVMFIGSLFVVVGRSTAPKLGELRAAIGDESHLQVLFVENDRDKDGFMTVEDFEGLVGTLDLNFSRNECLAAFDAMDGDDKGKVSYDDFKVWW 261
BLAST of mRNA_L-elsbetiae_contig52.13288.1 vs. uniprot
Match: A0A7S1XLD5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLD5_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 9.990e-19 Identity = 69/246 (28.05%), Postives = 113/246 (45.93%), Query Frame = 3 Query: 324 EGPISIKVLSYIAGIMLVVTGFFSFFGSFFTLHPVDAVVHLYMFVFGWGILLLEAKSQILPKKIVENIHKY--------------------------CAFTTVVWGRGAFFIFVGTLSLAQWVFI-DIVMGLYLVGVGAGMIYWGQEAYKNLDALHGEMKDPQTVSDIFNKFDHNHDGSLNVTEMGNLLESLGAMLRPTEVEAAIIIMDQDNDGKVTLAEFQAWWAKSSAPEIV*SQLTPSAGASV 980 G ++K L+ A +++VV G +FF S + P+ A++ +Y+F+ G L +E K E + F + GRGAF+IF GTL +AQW + D G +++ VG M+ G+ A ++ + D + + F+K+D + DG L TE+ L E LG+ + E+EAA+ ++D D G + EF+AWW + V + ASV Sbjct: 82 SGSAAMKALATGAALLMVVDGVMAFF-SLLSFSPLRALIEVYIFIAGVVSLAIEGALGWKRLKDFEEAIQVPSPRQPHPTRPDPTRIRCPTPTRQAKAPFLYYLSGRGAFYIFFGTLMVAQWPSLYDFAGGAFVIFVGVSMLASGRAAAGKMERFRDSIVDERGLRSEFSKYDVSRDGKLQPTELAALCEGLGSTMSHKELEAAMFMLDTDRSGTIEFEEFKAWWHREGEMAFVAKYFQTADDASV 326
BLAST of mRNA_L-elsbetiae_contig52.13288.1 vs. uniprot
Match: A0A7S2XB37_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XB37_9EUKA) HSP 1 Score: 84.0 bits (206), Expect = 1.830e-14 Identity = 56/192 (29.17%), Postives = 97/192 (50.52%), Query Frame = 3 Query: 345 VLSYIAGIMLVVTGFFSFFGSFFTLHPVDAVVHLYMFVFGWGILLLEAKSQILPKKIVENIHKYCAFTTVVWGRGAFFIFVGTLSLAQWVFIDIVMGLYLVGVGAGMIYWGQEAYKNLDALHGEM--KDPQTVSDIFNKFDHNHDGSLNVTEMGNLLESLGAMLRPTEVEAAIIIMDQDNDGKVTLAEFQAW 914 +L +A ++ V GFFS F V+ Y+ FG+ ++++ + + I K T +WG+G F+IF+GTL L QW I I++G Y++ VG MI ++ + L +L ++ + V + F K+D + +G ++ E +L L E++AA I+D D +GK+ EF+ W Sbjct: 39 LLGGLATLLCAVLGFFSTLTRF--------PVYCYVIGFGFISVVMDISQFMCTAGMKSWIEKEFKILTRLWGKGIFYIFIGTLLLWQWGLIPIIVGSYMMLVGILMILISFQSGRKLGSLRQKLVAQTDMEVEEAFKKYDKDGNGWISDAEFKDLAREHEISLNANEMDAAKNILDTDRNGKIDKNEFRVW 222
BLAST of mRNA_L-elsbetiae_contig52.13288.1 vs. uniprot
Match: A0A7J6LKW2_PEROL (Uncharacterized protein n=5 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LKW2_PEROL) HSP 1 Score: 80.9 bits (198), Expect = 1.420e-13 Identity = 39/115 (33.91%), Postives = 74/115 (64.35%), Query Frame = 3 Query: 321 REGPISIKVLSYIAGIMLVVTGFFSFFGSFFT-LHPVDAVVHLYMFVFGWGILLLEAKSQILPKKI--VENIHKYCAFTTVVWGRGAFFIFVGTLSLAQWVFIDIVMGLYLVGVG 656 ++GP ++VL ++ G+ + +TG F T LHP+D + + Y F+FG +LEA ++L +++ E I+++ F T++WGRG F++F G+L+L Q+ + ++G+Y+V +G Sbjct: 50 QQGPNGLRVLCFVGGLGVTLTGALGVLNIFSTILHPIDYLCNAYQFLFGVITCILEANPELLRERVHWQEKIYEHAKFLTLLWGRGLFYLFQGSLALVQFTLLYAIVGVYMVVMG 164
BLAST of mRNA_L-elsbetiae_contig52.13288.1 vs. uniprot
Match: C5KTV3_PERM5 (Uncharacterized protein n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KTV3_PERM5) HSP 1 Score: 79.7 bits (195), Expect = 2.940e-13 Identity = 38/115 (33.04%), Postives = 73/115 (63.48%), Query Frame = 3 Query: 321 REGPISIKVLSYIAGIMLVVTGFFSFFGSFFTL-HPVDAVVHLYMFVFGWGILLLEAKSQILPKKI--VENIHKYCAFTTVVWGRGAFFIFVGTLSLAQWVFIDIVMGLYLVGVG 656 ++GP ++VL ++ G+ + +TG F T+ HP+D + + Y F+FG +LEA ++L +++ E I++Y F T++WGRG F++F G+L+L Q+ + ++G+Y+ +G Sbjct: 46 QQGPNGLRVLCFVGGLGVTLTGALGVLNIFSTIIHPIDYLCNAYQFLFGGITCILEANPELLRERVHWQEKIYEYAKFLTLLWGRGLFYLFQGSLALVQFSLLYAIVGVYMFVMG 160
BLAST of mRNA_L-elsbetiae_contig52.13288.1 vs. uniprot
Match: A0A7J6NTM6_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NTM6_PEROL) HSP 1 Score: 80.9 bits (198), Expect = 5.750e-13 Identity = 39/115 (33.91%), Postives = 74/115 (64.35%), Query Frame = 3 Query: 321 REGPISIKVLSYIAGIMLVVTGFFSFFGSFFT-LHPVDAVVHLYMFVFGWGILLLEAKSQILPKKI--VENIHKYCAFTTVVWGRGAFFIFVGTLSLAQWVFIDIVMGLYLVGVG 656 ++GP ++VL ++ G+ + +TG F T LHP+D + + Y F+FG +LEA ++L +++ E I+++ F T++WGRG F++F G+L+L Q+ + ++G+Y+V +G Sbjct: 50 QQGPNGLRVLCFVGGLGVTLTGALGVLNIFSTILHPIDYLCNAYQFLFGVITCILEANPELLRERVHWQEKIYEHAKFLTLLWGRGLFYLFQGSLALVQFTLLYAIVGVYMVVMG 164 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig52.13288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig52.13288.1 >prot_L-elsbetiae_contig52.13288.1 ID=prot_L-elsbetiae_contig52.13288.1|Name=mRNA_L-elsbetiae_contig52.13288.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=236bp MASLFVGAFFLVFVFGARRIKAMVLKMREGPISIKVLSYIAGIMLVVTGFback to top mRNA from alignment at L-elsbetiae_contig52:39073..48219- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig52.13288.1 ID=mRNA_L-elsbetiae_contig52.13288.1|Name=mRNA_L-elsbetiae_contig52.13288.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9147bp|location=Sequence derived from alignment at L-elsbetiae_contig52:39073..48219- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig52:39073..48219- >mRNA_L-elsbetiae_contig52.13288.1 ID=mRNA_L-elsbetiae_contig52.13288.1|Name=mRNA_L-elsbetiae_contig52.13288.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1416bp|location=Sequence derived from alignment at L-elsbetiae_contig52:39073..48219- (Laminarionema elsbetiae ELsaHSoW15)back to top |