mRNA_L-elsbetiae_contig5199.13284.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5199.13284.1
Unique NamemRNA_L-elsbetiae_contig5199.13284.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig5199.13284.1 vs. uniprot
Match: D8LC30_ECTSI (Cytochrome P450 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC30_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 2.080e-120
Identity = 188/302 (62.25%), Postives = 237/302 (78.48%), Query Frame = 2 
Query:    8 WQFLPMLSWVRNAKKHARRMENVIQGAIDAVRLEPKTPGA-----AAKGDVDTCTGGTLLRKLIAATHGKG-SSDRNLFSDREVMGEATGLFLAGTETSALTLSWAMYYLSKSPAAFLRCRAEALETAQMSDGMVSTGEQLSKLEFCSAVFKEVLRLRTPAPVLMLHSTEEFTMKDGFVMDEGTGTIVLTRAAGVSDEWFTRGKEFVPERWIEAEREEALLGKGAAGDRRGTVAHEAKAFLAFGHGPRLCPGQDMAKAEGAMMIAAICARFDVSMAPGQADPPEETTSITTGPEEFDMIFSR 895
            W++LPM+ WVR  K+H+RR+ENVIQGA++AVR + K   A     AA+GDV    GGT+LRK+I AT+G   SSDR LF++RE+M +A GLF+A TET+ALTL W MYYL+K+P A LRCRAEAL+ A  SDGMVST EQL +L FC+AVFKE LRLRTPAP L    TE+FTMK G V+ +GT  + L RA G+S+++FTRG EFVPERWI +ERE+AL  K +    +G ++HE +AFL+ GHGPR+CPGQDMAKAEGA++IAAICARFD+S+APGQADPPEE +S T GP+EF+MI +R
Sbjct:  258 WKYLPMVPWVRETKQHSRRLENVIQGAVNAVRADAKLADANLGDSAAEGDVGI--GGTMLRKIIGATNGSANSSDRMLFNERELMHQANGLFVAATETTALTLCWCMYYLTKNPKAALRCRAEALKVAPESDGMVSTAEQLKRLRFCAAVFKEALRLRTPAPRLSFTCTEDFTMKSGRVLKKGTAVLTLNRAVGISEDFFTRGDEFVPERWISSEREKALSEKQSTWIGKGGISHEEEAFLSMGHGPRICPGQDMAKAEGAIIIAAICARFDLSLAPGQADPPEEYSSFTCGPKEFNMILTR 557
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BLAST of mRNA_L-elsbetiae_contig5199.13284.1 vs. uniprot
Match: D7FPK1_ECTSI (Cytochrome P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK1_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 3.580e-60
Identity = 127/298 (42.62%), Postives = 174/298 (58.39%), Query Frame = 2 
Query:   23 MLSWVRNAKKHARRMENVIQGAIDAVRLEPKTPGAAAKGDVDTCTGGTLLRKLIAATHG-----KGSSDRNLFSDREVMGEATGLFLAGTETSALTLSWAMYYLSKSPAAFLRCRAEALETAQMSDGMVSTGEQLSKLEFCSAVFKEVLRLRTPAPVLMLHSTEEFTMKDGFVMDEGTGTIVLTRAAGVSDEWFTRGKEFVPERWIEAEREEALLGKGAAGDRRGT-VAHEAKAFLAFGHGPRLCPGQDMAKAEGAMMIAAICARFDVSMAPGQADPPEETTSITTGPEEFDMIFSRR 898
            +L WVR  K+ + R++ V++GAID  R E K  GA+     +    G LLRKL++   G     K  S+R   SD+E++ ++ GLFLAG+ET+A TLSWA+Y+L+K P   LRCR EAL  A +    +           C A  +               S E  TMK G  ++ GT   +L R   +S+  FTR K+FVPERWI+AEREEALLG+ A  DR+ + V H  +   AFG GPR CPG DMA  E A+++AAI ARFD+++APGQADPPEE    T G E   ++ +++
Sbjct:  258 LLPWVREIKEKSSRLQRVVEGAIDKTRSEMKEAGASHPAGGEE---GALLRKLLSVEGGSDNAIKDVSNRMTLSDKEIVTQSKGLFLAGSETTAKTLSWAVYFLAKHPEMHLRCREEALRAAPLRTANIERA--------CIATTRR--------------SQETTTMKSGLKLEAGTAFTLLLRYPCLSEHSFTRAKDFVPERWIDAEREEALLGQPA--DRKSSDVVHREEVAQAFGGGPRKCPGMDMAHLEAAIILAAISARFDLALAPGQADPPEEVFKFTAGVESLKLVLTKK 528
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BLAST of mRNA_L-elsbetiae_contig5199.13284.1 vs. uniprot
Match: S4Y4D4_SORCE (Uncharacterized protein n=4 Tax=Sorangium cellulosum TaxID=56 RepID=S4Y4D4_SORCE)

HSP 1 Score: 132 bits (332), Expect = 3.170e-30
Identity = 88/245 (35.92%), Postives = 122/245 (49.80%), Query Frame = 2 
Query:  164 TLLRKLIAATHGKGSSDRNLFSDREVMGEATGLFLAGTETSALTLSWAMYYLSKSPAAFLRCRAEALETAQMSDGMVSTGEQLSKLEFCSAVFKEVLRLRTPAPVLMLHSTEEFTMKDGFVMDEGTGTIVLTRAAGVSDEWFTRGKEFVPERWIEAEREEALLGKGAAGDRRGTVAHEAKAFLAFGHGPRLCPGQDMAKAEGAMMIAAICARFDVSMAPGQADPPEETTSITTGPEEFDMIFSRR 898
            TLL  +IAA  G+    R   SD EV      + LAG +T+A TL+W +YYL   P    R R EA     +   ++ T EQ  +LE+  AV  E LRLR+ AP+L L +  +  + D   +  G G + LTRAAG   E+F   + F PERW+              G    T+ HE +  LAFG GPR+CPG+ MA  E A+ +  +   F V +A   A P  E  +    PE   + F++R
Sbjct:  262 TLLELMIAARDGEDPKAR--LSDAEVYANVLTMLLAGEDTTANTLAWILYYLGSRPDVQARAREEADRV--VGGALIPTLEQSKRLEYAGAVAHETLRLRSAAPLLYLEANHDTVVGD-VAVPAGAGVVALTRAAGRKPEYFGDPESFRPERWL--------------GGAPATLPHEPRMALAFGGGPRICPGRSMALLECAVTVGMVLRSFTVELA-DPAAPVRERMAFAMQPEGLRIRFTKR 486
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BLAST of mRNA_L-elsbetiae_contig5199.13284.1 vs. uniprot
Match: A0A150RUV1_SORCE (Cytochrome P450 n=4 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150RUV1_SORCE)

HSP 1 Score: 132 bits (332), Expect = 3.290e-30
Identity = 93/266 (34.96%), Postives = 131/266 (49.25%), Query Frame = 2 
Query:  125 AAAKGDVDTCTGG--------TLLRKLIAATHGKGSSDRNLFSDREVMGEATGLFLAGTETSALTLSWAMYYLSKSPAAFLRCRAEALETAQMSDGMVSTGEQLSKLEFCSAVFKEVLRLRTPAPVLMLHSTEEFTMKDGFVMDEGTGTIVLTRAAGVSDEWFTRGKEFVPERWIEAEREEALLGKGAAGDRRGTVAHEAKAFLAFGHGPRLCPGQDMAKAEGAMMIAAICARFDVSMAPGQADPPEETTSITTGPEEFDMIFSRR 898
            AAA+ +++   GG        TLL  +I A  G+  S     SD EV      + LAG +T+A TL+W +YYL   P    R R EA     +  G + T EQ  +LE+  AV +E LRLR+ AP+L L +  +  + D   +  G G +VLTRA G   E+F   + F PERW+              G    T+ HE +  LAFG GPR+CPG+ MA  E A+ +  +   F V +A   A P  E  +    PE   + F++R
Sbjct:  244 AAARRELEGGAGGVDQPARPRTLLELMIVARDGENPSAH--LSDAEVYANVLTMLLAGEDTTANTLAWILYYLGSRPDVQARAREEADRV--LGGGQIPTLEQSKRLEYTGAVTQETLRLRSAAPLLYLEANHDTVVGD-VAVPAGAGVVVLTRATGRKPEYFGDPESFRPERWL--------------GGAPPTLPHEPRMALAFGSGPRVCPGRSMALLECAVTVGMVLRSFTVQLADHTA-PVRERMAFAMQPEGLRIRFTKR 489
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BLAST of mRNA_L-elsbetiae_contig5199.13284.1 vs. uniprot
Match: A9G7P4_SORC5 (Uncharacterized protein n=2 Tax=Sorangium cellulosum TaxID=56 RepID=A9G7P4_SORC5)

HSP 1 Score: 132 bits (332), Expect = 3.320e-30
Identity = 87/245 (35.51%), Postives = 124/245 (50.61%), Query Frame = 2 
Query:  164 TLLRKLIAATHGKGSSDRNLFSDREVMGEATGLFLAGTETSALTLSWAMYYLSKSPAAFLRCRAEALETAQMSDGMVSTGEQLSKLEFCSAVFKEVLRLRTPAPVLMLHSTEEFTMKDGFVMDEGTGTIVLTRAAGVSDEWFTRGKEFVPERWIEAEREEALLGKGAAGDRRGTVAHEAKAFLAFGHGPRLCPGQDMAKAEGAMMIAAICARFDVSMAPGQADPPEETTSITTGPEEFDMIFSRR 898
            TLL  +IAA  G+    R   SD EV      + LAG +T+A TL+W +YYL   P    R R E      +  G++ T EQ  +LE+ +AV +E LRLR+ AP+L L +  +  + D   +  G G + LTRA G   E+F   + F PERW+              G    T+ HE +  LAFG GPR+CPG+ MA  E A+ +  +   F V +A   A P +E  +    PE   + F++R
Sbjct:  266 TLLELMIAARDGE--DPRARLSDAEVYANVLTMLLAGEDTTANTLAWILYYLGSRPDVQARAREEVDRV--LGGGLIPTLEQCKRLEYTAAVTQETLRLRSAAPLLFLEANHDTAVGD-VAVPAGAGVVALTRATGRKPEYFGDPESFRPERWL--------------GGAPSTLPHEPRMALAFGGGPRVCPGRAMALLECAVTVGMVLRSFTVHLADHTA-PVQERMAFAMQPEGLRIRFTKR 490
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BLAST of mRNA_L-elsbetiae_contig5199.13284.1 vs. uniprot
Match: A0A346MWU2_9GAMM (Cytochrome P450 n=1 Tax=Solimonas sp. K1W22B-7 TaxID=2303331 RepID=A0A346MWU2_9GAMM)

HSP 1 Score: 122 bits (305), Expect = 1.050e-26
Identity = 81/240 (33.75%), Postives = 118/240 (49.17%), Query Frame = 2 
Query:  179 LIAATHGKGSSDRNLFSDREVMGEATGLFLAGTETSALTLSWAMYYLSKSPAAFLRCRAEALETAQMSDGMVSTGEQLSKLEFCSAVFKEVLRLRTPAPVLMLHSTEEFTMKDGFVMDEGTGTIVLTRAAGVSDEWFTRGKEFVPERWIEAEREEALLGKGAAGDRRGTVAHEAKAFLAFGHGPRLCPGQDMAKAEGAMMIAAICARFDVSMAPGQADPPEETTSITTGPEEFDMIFSRR 898
            LI A    G  D ++FSD ++   A G  +AG +T+A+TL+W MY+L+  P A  R  AE          +V+ G   S   F  AV  E  RL+  APV  LH+T    +  G+ +  GT  ++ TR     D  F  G+EF PERW+  +                   +  +A L FGHGPRLCPG+++A+ E   + A +   F +S A  +  P EE+ + T  P+E  + F RR
Sbjct:  249 LIEALLVTGDEDGSVFSDHDIFSNALGTLVAGEDTTAMTLAWMMYFLAGHPEAQERLHAE----------VVAGG---SDYPFLEAVMNETFRLKPVAPVFFLHATANVEL-GGYAVPAGTDLVLATRPGAYDDAEFPDGREFRPERWLVPQ-----------------ANYVTRAPLPFGHGPRLCPGRNLAQLEIRTVAAMLARDFRISRADDK--PVEESFAFTMAPKELQVRFERR 455
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BLAST of mRNA_L-elsbetiae_contig5199.13284.1 vs. uniprot
Match: A0A2L0F841_SORCE (Cytochrome P450 n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A2L0F841_SORCE)

HSP 1 Score: 117 bits (294), Expect = 4.020e-25
Identity = 90/283 (31.80%), Postives = 142/283 (50.18%), Query Frame = 2 
Query:   59 RRMENVIQGAIDAVRLEPKTPGAAAKGDVDTCTGGTLLRKLIAATHGKGSSDRNLFSDREVMGEATGLFLAGTETSALTLSWAMYYLSKSPAAFLRCRAEALETAQMSDGMVSTG-EQLSKLEFCSAVFKEVLRLRTPAPVLMLHSTEEFTMKDGFVMDEGTGTIVLTRAAGVSDEWFTRGKEFVPERWIEAEREEALLGKGAAGDRRGTVAHEAKAFLAFGHGPRLCPGQDMAKAEGAMMIAAICARFDVSMA-PGQADPPEETTSITTGPEEFDMIFSRRK 901
            RRM ++IQ A   +  +P    A            +LL  ++ A   +    R   SD+EV+G    L LAG +T+A T++W +++++  P    R R+E    A++ D  +  G E   +L +  AV +E LRL++ AP+L L +  + T+     +  G   I+LTR  G+ +E F     FVPERW+     +A  GK           H+ +A LAFG GPR+CPG+ ++  E AM+ A +    DVS+  PG+  P +E    T  PE   + F+ R+
Sbjct:  229 RRMLDIIQAARAELDRDPARAAAPR----------SLLEAMLVARDAEDPKVR--LSDQEVLGNVLTLLLAGEDTTADTMAWMLHFMALRPDVQARMRSEV--DAELGDTDLPEGPEHAQRLRYIGAVAQETLRLKSAAPILFLEACAD-TVLGPVRLGAGARMILLTRQVGLKEESFHDATSFVPERWLTPRPADA--GK-----------HDPRAALAFGSGPRVCPGRALSLVESAMVGAMVARDLDVSLVDPGR--PVKELLGFTMKPEGLVVRFAPRR 481
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BLAST of mRNA_L-elsbetiae_contig5199.13284.1 vs. uniprot
Match: A0A4P2PSV2_SORCE (Cytochrome P450 n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A4P2PSV2_SORCE)

HSP 1 Score: 117 bits (293), Expect = 5.470e-25
Identity = 87/248 (35.08%), Postives = 128/248 (51.61%), Query Frame = 2 
Query:  164 TLLRKLIAATHGKGSSDRNLFSDREVMGEATGLFLAGTETSALTLSWAMYYLSKSPAAFLRCRAEALETAQMSDGMVSTG-EQLSKLEFCSAVFKEVLRLRTPAPVLMLHSTEEFTMKDGFV-MDEGTGTIVLTRAAGVSDEWFTRGKEFVPERWIEAEREEALLGKGAAGDRRGTVAHEAKAFLAFGHGPRLCPGQDMAKAEGAMMIAAICARFDVSMAPGQADPPEETTSITTGPEEFDMIFSRRK 901
            +LL  ++ A   +    R   SD+EV+G    L  AG +T+A T++W +++++  P    R RAE    A++ D  +  G E   +L +  AV  E LRL++ APVL L +  + T+  G V +  G   IVL R  G+ +E F     FVPERW+      A  GK           H+ +A LAFG GPR+CPG+ ++  E AM+ A +   FDVS+A   A P +E    T  PE   + FS R+
Sbjct:  254 SLLEAMLVARDAEDPKAR--LSDQEVLGNVLTLLFAGEDTTADTMAWMLHFMALRPDVQARMRAEV--DAELGDADLPEGPEHAQRLRYLGAVAHETLRLKSAAPVLFLEACADTTL--GPVRLAAGARMIVLMRQVGLKEESFHDAASFVPERWLTPRP--AGAGK-----------HDPRAALAFGSGPRVCPGRALSLIESAMVGAMVARDFDVSLA-DPARPVKELFGFTMKPEGLVVRFSPRR 481
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BLAST of mRNA_L-elsbetiae_contig5199.13284.1 vs. uniprot
Match: D0LJY2_HALO1 (Cytochrome P450 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) TaxID=502025 RepID=D0LJY2_HALO1)

HSP 1 Score: 115 bits (289), Expect = 1.770e-24
Identity = 72/228 (31.58%), Postives = 116/228 (50.88%), Query Frame = 2 
Query:  125 AAAKGDVDTCTGGTLLRKLIAATHGKGSSDRNLFSDREVMGEATGLFLAGTETSALTLSWAMYYLSKSPAAFLRCRAEALETAQMSDGMVSTGEQLSKLEFCSAVFKEVLRLRTPAPVLMLHSTEEFTMKDGFVMDEGTGTIVLTRAAGVSDEWFTRGKEFVPERWIEAEREEALLGKGAAGDRRGTVAHEAKAFLAFGHGPRLCPGQDMAKAEGAMMIAAICARFDV 808
            A A+ ++     G     L A  H +   D   F +  + G A  + LAG +T+A +L+WA++ LS       R RAE     ++S  +  T  ++++L +  AV +E LRLR  APVL++ S  +  + +   +  GT  ++LTR A +S+ +    + F+P RW++ ER   LL +G                L FG GPRLCPG+++A  E  MM+A +   F+V
Sbjct:  220 AEARSELAANPDGVTKNFLEAMLHAR-DEDGAAFDEAALFGNALTMLLAGEDTTASSLAWAVHELSDDAEVVARLRAEL--DGEISSAVPKTLREVARLPYALAVAEETLRLRPAAPVLLMESNRDAVLGEDIAVPAGTRVLLLTRLAAISEAYVPEPQRFLPARWLDRERASELLRRGV--------------HLPFGSGPRLCPGRNLAFIEMQMMLAVLYRNFEV 430
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BLAST of mRNA_L-elsbetiae_contig5199.13284.1 vs. uniprot
Match: A0A6L8CMK8_9GAMM (Cytochrome P450 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8CMK8_9GAMM)

HSP 1 Score: 115 bits (288), Expect = 2.560e-24
Identity = 83/250 (33.20%), Postives = 122/250 (48.80%), Query Frame = 2 
Query:  167 LLRKLIAATHGKGSSDRNLFSDREVMGEATGLFLAGTETSALTLSWAMYYLSKSPAAFLRCRAEALETAQMSDGMVSTG------EQLSKLEFCSAVFKEVLRLRTPAPVLMLHSTEEFTMKDGFVMDEGTGTIVLTRAAGVSDEWFTRGKEFVPERWIEAEREEALLGKGAAGDRRGTVAHEAKAFLAFGHGPRLCPGQDMAKAEGAMMIAAICARFDVSMAPGQADPPEETTSITTGPEEFDMIFSRR 898
             L  ++AA   +GS     FSD EV   A  L LAG +T+A +++WA++YL+  P  F R R E        D +V+ G      EQ  +L F  A   EV+RL+  AP+ +L +  E  +  G  + +GT   +L R     +E F  G +F P+RW+              G+R     HE +AF+ FG GPR+CPG+ +A  E  M++A +C  FD+  A    D   E  + T  P    +I  RR
Sbjct:  257 FLESILAALAEEGSG----FSDEEVFANAGTLLLAGEDTTANSIAWAVHYLTGYPEHFRRARDEV-------DALVAPGRIIEDPEQAGRLPFVDAFCNEVMRLKPVAPLQILETVTEMNIL-GCRVPKGTPVTILARRMATRNENFGDGSDFDPDRWLVP-----------PGERH--RPHERQAFIPFGAGPRICPGRSLALLEIRMILAMLCHNFDLEAAVAP-DEVGERMAFTMCPVNLSVILKRR 480
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5199.13284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC30_ECTSI2.080e-12062.25Cytochrome P450 n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
D7FPK1_ECTSI3.580e-6042.62Cytochrome P450 n=1 Tax=Ectocarpus siliculosus Tax... [more]
S4Y4D4_SORCE3.170e-3035.92Uncharacterized protein n=4 Tax=Sorangium cellulos... [more]
A0A150RUV1_SORCE3.290e-3034.96Cytochrome P450 n=4 Tax=Sorangium cellulosum TaxID... [more]
A9G7P4_SORC53.320e-3035.51Uncharacterized protein n=2 Tax=Sorangium cellulos... [more]
A0A346MWU2_9GAMM1.050e-2633.75Cytochrome P450 n=1 Tax=Solimonas sp. K1W22B-7 Tax... [more]
A0A2L0F841_SORCE4.020e-2531.80Cytochrome P450 n=1 Tax=Sorangium cellulosum TaxID... [more]
A0A4P2PSV2_SORCE5.470e-2535.08Cytochrome P450 n=1 Tax=Sorangium cellulosum TaxID... [more]
D0LJY2_HALO11.770e-2431.58Cytochrome P450 n=1 Tax=Haliangium ochraceum (stra... [more]
A0A6L8CMK8_9GAMM2.560e-2433.20Cytochrome P450 n=1 Tax=Gammaproteobacteria bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5199contigL-elsbetiae_contig5199:5246..11079 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score366.7
Seed ortholog evalue1e-98
Seed eggNOG ortholog2880.D8LC30
KEGG koko:K15388,ko:K21446
Hectar predicted targeting categoryother localisation
EggNOG free text desc.iron ion binding
EggNOG OGsCOG2124@1,KOG0158@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01008
Exons9
Model size1347
Cds size885
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816532.0937715-UTR-L-elsbetiae_contig5199:5245..52671622816532.0937715-UTR-L-elsbetiae_contig5199:5245..5267Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5199 5246..5267 +
1691683627.626379-UTR-L-elsbetiae_contig5199:5245..52671691683627.626379-UTR-L-elsbetiae_contig5199:5245..5267Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5199 5246..5267 +
1622816532.2274597-UTR-L-elsbetiae_contig5199:10639..110791622816532.2274597-UTR-L-elsbetiae_contig5199:10639..11079Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5199 10640..11079 +
1691683627.7445455-UTR-L-elsbetiae_contig5199:10639..110791691683627.7445455-UTR-L-elsbetiae_contig5199:10639..11079Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5199 10640..11079 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816532.1095047-CDS-L-elsbetiae_contig5199:5267..53271622816532.1095047-CDS-L-elsbetiae_contig5199:5267..5327Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 5268..5327 +
1691683627.6387749-CDS-L-elsbetiae_contig5199:5267..53271691683627.6387749-CDS-L-elsbetiae_contig5199:5267..5327Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 5268..5327 +
1622816532.1224852-CDS-L-elsbetiae_contig5199:5823..59221622816532.1224852-CDS-L-elsbetiae_contig5199:5823..5922Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 5824..5922 +
1691683627.6482184-CDS-L-elsbetiae_contig5199:5823..59221691683627.6482184-CDS-L-elsbetiae_contig5199:5823..5922Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 5824..5922 +
1622816532.1397479-CDS-L-elsbetiae_contig5199:6741..68181622816532.1397479-CDS-L-elsbetiae_contig5199:6741..6818Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 6742..6818 +
1691683627.6585517-CDS-L-elsbetiae_contig5199:6741..68181691683627.6585517-CDS-L-elsbetiae_contig5199:6741..6818Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 6742..6818 +
1622816532.150881-CDS-L-elsbetiae_contig5199:7147..72701622816532.150881-CDS-L-elsbetiae_contig5199:7147..7270Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 7148..7270 +
1691683627.6706734-CDS-L-elsbetiae_contig5199:7147..72701691683627.6706734-CDS-L-elsbetiae_contig5199:7147..7270Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 7148..7270 +
1622816532.1626053-CDS-L-elsbetiae_contig5199:8008..81231622816532.1626053-CDS-L-elsbetiae_contig5199:8008..8123Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 8009..8123 +
1691683627.6826544-CDS-L-elsbetiae_contig5199:8008..81231691683627.6826544-CDS-L-elsbetiae_contig5199:8008..8123Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 8009..8123 +
1622816532.179251-CDS-L-elsbetiae_contig5199:8466..85881622816532.179251-CDS-L-elsbetiae_contig5199:8466..8588Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 8467..8588 +
1691683627.6955054-CDS-L-elsbetiae_contig5199:8466..85881691683627.6955054-CDS-L-elsbetiae_contig5199:8466..8588Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 8467..8588 +
1622816532.1901524-CDS-L-elsbetiae_contig5199:9026..91561622816532.1901524-CDS-L-elsbetiae_contig5199:9026..9156Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 9027..9156 +
1691683627.7104251-CDS-L-elsbetiae_contig5199:9026..91561691683627.7104251-CDS-L-elsbetiae_contig5199:9026..9156Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 9027..9156 +
1622816532.1999767-CDS-L-elsbetiae_contig5199:9307..93851622816532.1999767-CDS-L-elsbetiae_contig5199:9307..9385Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 9308..9385 +
1691683627.7227676-CDS-L-elsbetiae_contig5199:9307..93851691683627.7227676-CDS-L-elsbetiae_contig5199:9307..9385Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 9308..9385 +
1622816532.213758-CDS-L-elsbetiae_contig5199:10558..106391622816532.213758-CDS-L-elsbetiae_contig5199:10558..10639Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 10559..10639 +
1691683627.7325585-CDS-L-elsbetiae_contig5199:10558..106391691683627.7325585-CDS-L-elsbetiae_contig5199:10558..10639Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5199 10559..10639 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5199.13284.1prot_L-elsbetiae_contig5199.13284.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5199 5268..10639 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5199.13284.1

>prot_L-elsbetiae_contig5199.13284.1 ID=prot_L-elsbetiae_contig5199.13284.1|Name=mRNA_L-elsbetiae_contig5199.13284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=295bp
MLSWVRNAKKHARRMENVIQGAIDAVRLEPKTPGAAAKGDVDTCTGGTLL
RKLIAATHGKGSSDRNLFSDREVMGEATGLFLAGTETSALTLSWAMYYLS
KSPAAFLRCRAEALETAQMSDGMVSTGEQLSKLEFCSAVFKEVLRLRTPA
PVLMLHSTEEFTMKDGFVMDEGTGTIVLTRAAGVSDEWFTRGKEFVPERW
IEAEREEALLGKGAAGDRRGTVAHEAKAFLAFGHGPRLCPGQDMAKAEGA
MMIAAICARFDVSMAPGQADPPEETTSITTGPEEFDMIFSRRKD*
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mRNA from alignment at L-elsbetiae_contig5199:5246..11079+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5199.13284.1 ID=mRNA_L-elsbetiae_contig5199.13284.1|Name=mRNA_L-elsbetiae_contig5199.13284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5834bp|location=Sequence derived from alignment at L-elsbetiae_contig5199:5246..11079+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGGATGGCAGTTTTTGCCCATGCTGTCGTGGGTTCGCAACGCAAAGA
AGCACGCACGTCGCATGGAGAACGTTATCCAAGTGAGTGGCCGACCTGAA
ATAACTGACACGCCTGCTCCGCTGACACTTCGGGAACTTTCTTGCCGGCT
GGCATGATATTCTCGAAGGAGTAGACTAGGGTGTGTACCGACCGACCTCC
TGAACATTTTTTGAAAGCTCGATTCCTCCCCAGCAAAAAGATTGCAGCAC
CGAAAGGGGGTGGCGTTGTATAGAACTAGTCGAGGCCTGTTCGGACATGT
GTCGTTTCAGTGCTGCCACTCTTCGCTACGGAGCAATCGTGCTTTCAAAA
TCCGTCCAGGGGGGGGGTTGTATCTTGTGCCATCTTCGGTAGACTGTGTG
CCGACCGACCTCCTGAAGGATTACAGATTTTGGCTGGTGCTTAAGAAATT
GATTGAGCACCCACTGAACCTGCAGCACCGATATTTGCCAGTCTGGTGCT
GATGGACATTTCCTCCTGCCGCTGCTGCTCCTGTTGCTACCTCTGTTGCT
AAACCTACCACTCACTGGCCTGCTACAGGGCGCGATCGACGCAGTGCGGC
TTGAGCCCAAGACACCTGGCGCGGCTGCCAAAGGCGATGTCGACACCTGT
ACCGGTGGCACTCTGCTCCGCAAGCTCGTGAGTGTGTGCCCACTGTAAAC
GATATATCAGCTTTCTGCTATGTAAGTTGCTGATGCTGGAAGGGAGTTTC
CCTTGAGCTCCCGCCGACGGTTTGGTAGTTTTGCTTACGGACTTCAAGTA
CATAAACCCAATGGCGCACCTTTCGGGCCCTCTATCTAGGTGTGAGGTGT
GGGAGGAAATCATTTAGATTATCAGAGCCTCGAGTCCAATAGCGGGGCAA
CGGCGGTTTGAGTAGCATTGTTTAGCTATGTAGTCTAGCGAGTTACTGGA
TTCCTTGTTTAGGTACACAGATCGAACGGTCATCAGGTCGACAAACTTGG
GCTGAAAGACAGCGCATCAGCTGTCGAATTATACGTGCATATAGGGGGCC
AACTAGTGCGCTCGCAAGTTGGTAGTAGGTGCTCTAGAACTGCACGTGCA
ACTCGTCGGCGTGATATACTGTGTTATAGAAAGGTTAGGGAGGCAAACCA
AGGAAGAGAGGTATCTGCCGTTATTTACAGTCATGTGTGTACAAGGTTCG
GTCAGTGTCAGCTTCATGCTGCTCCCCGTTCTTGAGGGCGGATTCCTCCG
AAGCGAACGCAAATATAGCAGACCGCTTCTTCCCCCCTTGGAAAAGAGGA
GCTTCAACTATTTCTACCATGGGGTTTTAGCCAGCACTATCGCCTGAAGG
CCCCCCTTAACTTGACTCCAAACATCTCAAACTCACCCAAGTCCCAAGGT
TTTCGTTCCCAAAACGGCAGCCAGTCATGACAGGGAGCTGAAACCATGCA
CACGATCGCCGTCCCCCATGGTTTACCATTGCTTGGATGATCGCAGATCG
CGGCTACGCACGGCAAGGGAAGCAGCGACCGCAATCTTTTCTCCGATCGA
GAAGTCATGGGCGAGGCCACCGGGTGACTCTTGACCAACTGCCGATTGTT
GTTGTCTTTGGTTGCTGTTGTTGTTGCTCTCTTTTCACGACCAAGCGTGA
GGCAATGGCATTAATCTTCGTGCGTTTTCGGCGGCCTATCTTTTCAATAT
CCTTTCGTGGCACGCGCACTCTTTTTTCACGACCAAGCGTGAGGCAATGG
CATTAATCTTCGTGCGTTTTCGGCGGCCTATCTTTTCAATATCCTTTCGT
GGCACGCGCACCTGCACACAGACTCACCGGTTGCGTTTTCCCCGATCGGC
CTTTCACGATGAACGAACCAATCGACCCACGTCCGTATGGCCGGTGTATC
AGCCTGTTCCTTGCCGGGACGGAGACATCGGCGCTAACCCTAAGCTGGGC
TATGTACTACCTCTCCAAGAGTCCCGCGGCGTTCTTGCGTTGCCGTGCCG
AGGCCCTCGAAACGGCACAGATGAGGTATGCAGCACTCGGATCGGGGTTT
TGACTGAAATATTAATAGTGGCTGGCGATGTTGATACTTTATCGACGGCA
CTTCCTTGTTGGCGACCTCGTCAGCGACCACAAGTTGGTCGGCGCTTGAT
GAAAGCTGGGGTGCTTCAAGGTGTCTGCTTTCTGGCGCTCATATTCGAAC
GTCTTCTTGGGCTGGCCTTCCTGCTTACGTTTGCCTTCTCGCGCTCATGT
TGTATAAATAGACCCGAGGGTTTGACGACATAAAAAATCTGGCGAACTCA
ACTCTAGTAGTCGTGGGGCCACAAGAAAGGAAATGTTTAAGGCGCTCCCG
TTGGCCTTACTCTTGGCGCTGCAGTTCCCTTGGCAAACGCCACCAAACGC
GCAACGCTTGCTTGCACCCCCCCCTGCTCGTTTTTCGCCCCGAGCAGTTT
TTGTAGCGTCTCGCCGTGCTTAAATTTCACATGGTCTCTCCGTCGATCAA
AACAAGTGGTTGGCGCTCTCTATGTCTCAACCGGCCAGTTAGCGCCGGTC
GGACTCGCGCCTCGTTCGACTTTGTGTTTCCACGCTGATCTTTAATTAAC
TTGTGTCGCAAAAACACACACATTTTCCGTAAGTAAGGCCAAAGCAAACG
CGAGTTTCTGTTCTGTGTATGTACTGTATGTACGTAGTCTAGGGCCTATG
CATCGGAAATGTTCTTCCTTGTCTCATGGGTGTCGTGGATGCCTAATTAT
TTGTGATGCGAAGCGACGGCATGGTGTCCACGGGCGAGCAGCTGTCCAAG
CTCGAGTTTTGCTCCGCGGTGTTCAAGGAAGTGCTGAGACTGAGGACGCC
CGCCCCGGTGCTGATGCTCCATAGCACGGTACGCCTGTTTCCACTCCGCG
CTAAACAGCAACGGGCGATTTGCCGGGATCGTGCAAAACTTGTCAATCAA
ATAGGACGACTCCCTGTGGTGTCGGGCAAGCATCTGCCTTGGAATGCCTC
CTCAGATAGACTGGTTATATACATTTGGTCTAAATGTGAACTCGACGCTC
GTTTATTGATGCCTCCTCGTCGATTAGACTTAAGTGAGTTTTGGGTGACG
AGAAAGAGACAGAGTGATTTAGTCTTTGTACAGTGGTACGAACGATTTGG
TTTTCGGTCAAGTGCTTTTGGAGCGTTGGATTGGCAACCGCCTAATTCAT
TCGTTGGCCATGAATTTTCAGGAGGAATTCACGATGAAGGACGGTTTCGT
GATGGACGAAGGAACTGGGACCATCGTGCTTACTCGAGCGGCAGGGGTCT
CGGACGAGTGGTTTACGAGGGGAAAGGAGTTCGTGCCAGAGAGGTAGGTG
ACCGGGAGTATCCATCGTTTTGCTGCTGTGCTAAAGGGGGCCCGCCCTTT
GATACTGCCGGTGTTGTTTGTTGTTCTTGGATACCCTTTAGCTAACAACT
GCGGCTCTGCCACTGTGTGCATCTTCGTAGCGAAACGCTCTACTTGCTTT
TTTTGTGGATCCGACGATGTCCGTTTTTGTCTCGTCCTGATTTTCAAAAA
TTGGCAATGCTTCCCCCCCACGCCAACCTCTTCCCTGGGATGGTGGAGGG
GCACATATAGAGAAGGAATCCTCCCCGCAACACGCGAGAGGGTTCGTGCC
GTTAGATATTTCCTTGGTACAGCAGCAGCGGTGCCATCTATTTGACTGCT
TATTTATTTACAAAACTAGTTTAATTAGATCGCGGCACCCCTGAAACTAT
CTGGACGTGTGCGCTCCTGCGACACACGCAGGTGGATCGAGGCTGAGCGC
GAGGAGGCGTTGTTGGGAAAAGGGGCGGCAGGCGACAGGAGGGGCACCGT
GGCTCACGAGGCAAAAGCGTTCTTGGCTTTCGGTCACGGTCCAAGACTGT
GCCCAGGGCAGGTTCGTTGCAGGTTACGGTGCATTACCCTGGCAAGGCTC
GGGCAGCAAGCGGCAGCATTATGACAGCATAAAGGGCAACAGCAGGAGCG
ATAAACAGATGACAATTAATTCCTCGTCGATCTCGCGTGCCGTGCGTTTC
TTTTGAACCTAGGACATGGCCAAGGCCGAGGGCGCGATGATGATAGCCGC
CATCTGCGCTCGTTTCGACGTCTCGATGGCCCCGGGCCAGGTACGCACGT
GAACGAATTAGACACTATGTGGTGCTATAGACCAACTACACCGACAGCAG
GGACGAACTTAGCACCGAATGGCACGAACCAAAACCAAGAAGGAAACACG
CAAGCAACGAAGACAACCAATTAATTGAAGAGGTTGATATTCACCTACCG
CGCTCCTGCCTATAGTCCAGCCAGTTTATTCGTGCTCTCGAATCGACTGA
CGGAAATTGCCCCCCTATTTAGGTGATACCATATTGATGATACGGTTGTT
TGGAGGCTGTTAAAAGCTCGAATGACCACTGGACTACCAGTCAGCGCTGG
CTGGTAGTCCAGTGGTCATTCGAGCTCTTTTAACAAAAGCTAATTCTTTA
GGAAGAAAAATACTCAGGGAGAAATTCGAACCCTGGCATTGGCTTTTGCT
AAAAAGCTCGTATGACCACTGGAGAAATTCGAACCCTGGCATTGGCTTTT
GTTAAAAAGCTCGTATGACCACTGGACTACCAGACAGCGCTGACCACAGG
GACGGCAACCCTGAGGGTGAAATTCCAAGTTCTTGGCTTAACAGCTAGAA
GGACGCGGGCGTAGCTTTTGAAAGATAAGCAGATAATCAAAAATGGAACC
TAACCCACATTGGAGACAGGACTCCCGTGAGAATTAGCTTTTGTTAAGAA
GCTCGAATGACCACTGGACTACCAGTCAGCCGCTGACTGGTAGTCCAGTG
GTCATTCGAGCTTCTTAACAGAGGCCCTCGCTTGCGCTGACTGGTAGTCC
AGTGGTCATTCGAGCTTCTTAACAGAGGCCCTCGCTTGGAATGCCGTCCA
ACCGTTACTACAGTAGTAGCCGTGCGTGCGTAAGAAGAGCAGATTGGCCA
TGTTCGCATATGATCTGTGTTTCTTGTGTTCTTTGATGATGGGTGTGGAC
CGTATGGCGACCCGGTGGGATAATGTTTATGTTTTACGGGATGAAGAATC
CTATCCGGGCGCAAGCGAGAATCAGTAAGTAACTCTCTACGATTTTCGCG
CTTGGTGCAACGCTCGCCTGCCTTGCTGATGATAACCCGACGAGAGTGAA
ACGGGAACGGTCTCCGCTTTCCAGGGCGTTCTGATGACTACTACCTCTTG
TAGACGGCAATGAAGACCCTTATCCCCCCACCGGTACCCGCTATGATGCA
TCTCGGGTAATAGGCGGATCCTCCGGAGGAGACCACTTCTATAACGACGG
GTCCCGAGGAGTTCGACATGATCTTCTCGAGGAGGAAAGACTGAAGATTT
GATGAGCTGAGAATAACCTGTGAAATAGAACCAGATACATACGCACGTCT
GGATCGAACCTCTCGGTCGCGGCGCGGCCCGATTCATCAGGTTGGCCTTA
AAGACACGTTGAACAGCATGGGTCTTGGAGCCTGAGTGACTTGCCTGGTA
AAAAAGACACGTACAGGCGTACAATTGGAGATGCTGAGGGACTGTGTGAT
TTTAGCACACAGACAAGGGGGAGCAGGCTAGGGTGTTGCGGGAATCACCA
AGCAAAGGGGTGATTGCTAAATAACTTCCCACACATGTACCAATGACCGT
TTTTGTGCTGTTCTTGTGTTTCTTTTGTGTGGGGATGGGATGTGTTGTGA
ATACTCACGCATTGCCAGATTATTGCAAGCATGGTGCGGGGGAATCCGGG
GGGGGTTCCGCGTGTGTGATGAATTGGATTGGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5199:5246..11079+

>mRNA_L-elsbetiae_contig5199.13284.1 ID=mRNA_L-elsbetiae_contig5199.13284.1|Name=mRNA_L-elsbetiae_contig5199.13284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1770bp|location=Sequence derived from alignment at L-elsbetiae_contig5199:5246..11079+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGTCGTGGGTTCGCAACGCAAAGAAGCACGCACGTCGCATGGAGAA
CGTTATCCAAATGCTGTCGTGGGTTCGCAACGCAAAGAAGCACGCACGTC
GCATGGAGAACGTTATCCAAGGCGCGATCGACGCAGTGCGGCTTGAGCCC
AAGACACCTGGCGCGGCTGCCAAAGGCGATGTCGACACCTGTACCGGTGG
CACTCTGCTCCGCAAGCTCGGCGCGATCGACGCAGTGCGGCTTGAGCCCA
AGACACCTGGCGCGGCTGCCAAAGGCGATGTCGACACCTGTACCGGTGGC
ACTCTGCTCCGCAAGCTCATCGCGGCTACGCACGGCAAGGGAAGCAGCGA
CCGCAATCTTTTCTCCGATCGAGAAGTCATGGGCGAGGCCACCGGATCGC
GGCTACGCACGGCAAGGGAAGCAGCGACCGCAATCTTTTCTCCGATCGAG
AAGTCATGGGCGAGGCCACCGGCCTGTTCCTTGCCGGGACGGAGACATCG
GCGCTAACCCTAAGCTGGGCTATGTACTACCTCTCCAAGAGTCCCGCGGC
GTTCTTGCGTTGCCGTGCCGAGGCCCTCGAAACGGCACAGATGAGCCTGT
TCCTTGCCGGGACGGAGACATCGGCGCTAACCCTAAGCTGGGCTATGTAC
TACCTCTCCAAGAGTCCCGCGGCGTTCTTGCGTTGCCGTGCCGAGGCCCT
CGAAACGGCACAGATGAGCGACGGCATGGTGTCCACGGGCGAGCAGCTGT
CCAAGCTCGAGTTTTGCTCCGCGGTGTTCAAGGAAGTGCTGAGACTGAGG
ACGCCCGCCCCGGTGCTGATGCTCCATAGCACGCGACGGCATGGTGTCCA
CGGGCGAGCAGCTGTCCAAGCTCGAGTTTTGCTCCGCGGTGTTCAAGGAA
GTGCTGAGACTGAGGACGCCCGCCCCGGTGCTGATGCTCCATAGCACGGA
GGAATTCACGATGAAGGACGGTTTCGTGATGGACGAAGGAACTGGGACCA
TCGTGCTTACTCGAGCGGCAGGGGTCTCGGACGAGTGGTTTACGAGGGGA
AAGGAGTTCGTGCCAGAGAGGAGGAATTCACGATGAAGGACGGTTTCGTG
ATGGACGAAGGAACTGGGACCATCGTGCTTACTCGAGCGGCAGGGGTCTC
GGACGAGTGGTTTACGAGGGGAAAGGAGTTCGTGCCAGAGAGGTGGATCG
AGGCTGAGCGCGAGGAGGCGTTGTTGGGAAAAGGGGCGGCAGGCGACAGG
AGGGGCACCGTGGCTCACGAGGCAAAAGCGTTCTTGGCTTTCGGTCACGG
TCCAAGACTGTGCCCAGGGCAGGTGGATCGAGGCTGAGCGCGAGGAGGCG
TTGTTGGGAAAAGGGGCGGCAGGCGACAGGAGGGGCACCGTGGCTCACGA
GGCAAAAGCGTTCTTGGCTTTCGGTCACGGTCCAAGACTGTGCCCAGGGC
AGGACATGGCCAAGGCCGAGGGCGCGATGATGATAGCCGCCATCTGCGCT
CGTTTCGACGTCTCGATGGCCCCGGGCCAGGACATGGCCAAGGCCGAGGG
CGCGATGATGATAGCCGCCATCTGCGCTCGTTTCGACGTCTCGATGGCCC
CGGGCCAGGCGGATCCTCCGGAGGAGACCACTTCTATAACGACGGGTCCC
GAGGAGTTCGACATGATCTTCTCGAGGAGGAAAGACTGAGCGGATCCTCC
GGAGGAGACCACTTCTATAACGACGGGTCCCGAGGAGTTCGACATGATCT
TCTCGAGGAGGAAAGACTGA
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