mRNA_L-elsbetiae_contig5195.13281.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5195.13281.1 vs. uniprot
Match: A0A6H5K1G5_9PHAE (CRC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G5_9PHAE) HSP 1 Score: 173 bits (439), Expect = 2.100e-52 Identity = 81/97 (83.51%), Postives = 87/97 (89.69%), Query Frame = 2 Query: 2 GQHICSDACKCVNCLNSDAHGAERRAAVRELLCRSPHAFDAKFKTE-VLAANGGTGTSRAVVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDC 289 GQ +CSDAC+C NC NS HG ERRAAVRELLCRSPHAFDAKFKTE VLA +GGT T+ A+VHNTGCGCSKSACLKRYCECFNGGIACS+KCRCKDC Sbjct: 10 GQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTEKVLATSGGTATASALVHNTGCGCSKSACLKRYCECFNGGIACSNKCRCKDC 106
BLAST of mRNA_L-elsbetiae_contig5195.13281.1 vs. uniprot
Match: A0A2P6VRN3_9CHLO (Tesmin TSO1-like CXC 5 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VRN3_9CHLO) HSP 1 Score: 95.1 bits (235), Expect = 9.300e-21 Identity = 48/91 (52.75%), Postives = 57/91 (62.64%), Query Frame = 2 Query: 20 DACKCVNCLNSDAHGAERRAAVRELLCRSPHAFDAKFKTEVLAANGGTGT-SRAVVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDC 289 DAC C+NC N+ AH + R+AAV +L R+P+AF K A G G S HN GC C KS CLK+YCECF GIACSD C+C DC Sbjct: 144 DACNCLNCHNNRAHESTRQAAVEAILERNPNAFRPKI------AGGSEGRHSGGARHNKGCNCKKSGCLKKYCECFQAGIACSDNCKCLDC 228
BLAST of mRNA_L-elsbetiae_contig5195.13281.1 vs. uniprot
Match: A0A830D4A7_9LAMI (Protein tesmin/tso1-like cxc 5 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830D4A7_9LAMI) HSP 1 Score: 94.7 bits (234), Expect = 1.300e-20 Identity = 45/93 (48.39%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 11 ICSDACKCVNCLNSDAHGAERRAAVRELLCRSPHAFDAKFKTEVLAANGGTGTSRAVVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDC 289 I D C C+NC N H +R+ ++ +L R+P+AF K +AAN G + V HN GC C KS CLKRYCECF I CSDKC+C DC Sbjct: 137 IYCDGCNCINCHNKMEHEDDRKGSIDAILERNPNAFRPK-----IAANSPHGATDGVEHNKGCNCKKSGCLKRYCECFQANILCSDKCKCVDC 224
BLAST of mRNA_L-elsbetiae_contig5195.13281.1 vs. uniprot
Match: A0A7S0DST4_9EUKA (Hypothetical protein n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DST4_9EUKA) HSP 1 Score: 93.2 bits (230), Expect = 2.100e-20 Identity = 44/92 (47.83%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 14 CSDACKCVNCLNSDAHGAERRAAVRELLCRSPHAFDAKFKTEVLAANGGTGTSRAVVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDC 289 C D C C NC N++ ER+ A+R L R+PHAF K T + G + A+VHN GC C KS C K+YCECF GI CS++C+C DC Sbjct: 49 CRD-CNCKNCRNNEEFQKERQHAIRYTLERNPHAFLPKIATSPMREAGARDPASALVHNKGCQCKKSHCRKKYCECFQAGILCSERCKCHDC 139
BLAST of mRNA_L-elsbetiae_contig5195.13281.1 vs. uniprot
Match: A0A6H5JPL0_9PHAE (CRC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL0_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 4.600e-20 Identity = 46/95 (48.42%), Postives = 59/95 (62.11%), Query Frame = 2 Query: 5 QHICSDACKCVNCLNSDAHGAERRAAVRELLCRSPHAFDAKFKTEVLAANGGTGTSRAVVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDC 289 Q +C+ +C C +C N+ + R A+ +L R+P AFDAKF+ T AVVH TGC C KSACLK+YCECFN G+ACS+KC C C Sbjct: 398 QVVCTASCNCHHCYNNSNQESMRLQAINGVLERNPAAFDAKFRE--------TEKHDAVVHKTGCKCRKSACLKKYCECFNKGVACSEKCNCVAC 484
BLAST of mRNA_L-elsbetiae_contig5195.13281.1 vs. uniprot
Match: D8LP28_ECTSI (TSO1 transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP28_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 6.150e-20 Identity = 46/95 (48.42%), Postives = 59/95 (62.11%), Query Frame = 2 Query: 5 QHICSDACKCVNCLNSDAHGAERRAAVRELLCRSPHAFDAKFKTEVLAANGGTGTSRAVVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDC 289 Q +C+ +C C +C N+ + R A+ +L R+P AFDAKF+ T AVVH TGC C KSACLK+YCECFN G+ACS+KC C C Sbjct: 44 QVVCTASCNCHHCYNNANQESMRLQAINGVLERNPAAFDAKFRE--------TEKHDAVVHKTGCKCRKSACLKKYCECFNKGVACSEKCNCVGC 130
BLAST of mRNA_L-elsbetiae_contig5195.13281.1 vs. uniprot
Match: D7FZ03_ECTSI (CRC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ03_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 7.970e-20 Identity = 38/46 (82.61%), Postives = 40/46 (86.96%), Query Frame = 2 Query: 2 GQHICSDACKCVNCLNSDAHGAERRAAVRELLCRSPHAFDAKFKTE 139 GQ +CSDAC+C NC NS HG ERRAAVRELLCRSPHAFDAKFKTE Sbjct: 12 GQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTE 57
BLAST of mRNA_L-elsbetiae_contig5195.13281.1 vs. uniprot
Match: A0A8J5XVP9_DIALT (CRC domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XVP9_DIALT) HSP 1 Score: 92.0 bits (227), Expect = 7.970e-20 Identity = 45/93 (48.39%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 11 ICSDACKCVNCLNSDAHGAERRAAVRELLCRSPHAFDAKFKTEVLAANGGTGTSRAVVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDC 289 +CS C CV CLN D H A R A + L R+P AF K + + AA + H GC C KS CLK+YCECF GIACSDKC+C +C Sbjct: 169 LCSAGCSCVGCLNLDQHAAVRDDARKATLQRNPTAFKPKIQDALAAAT--EAQAPTATHVRGCFCKKSGCLKKYCECFGAGIACSDKCKCDNC 259
BLAST of mRNA_L-elsbetiae_contig5195.13281.1 vs. uniprot
Match: A0A7S1C0F8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C0F8_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.110e-19 Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 11 ICSDA-CKCVNCLNSDAHGAERRAAVRELLCRSPHAFDAKFKTEVLAANGGTGTSRAVVHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDC 289 +C A C+C+ C N++AH + R+ A+ +L R+P AFD KF + +A G+ +++ H GC C KSACLK+YCECFN G+ CS CRC +C Sbjct: 317 LCDSAICRCLVCYNTEAHYSIRKEAIAAILERNPTAFDKKFMDKTTSA--GSRSTKTGAHKVGCKCRKSACLKKYCECFNMGVKCSQNCRCINC 408
BLAST of mRNA_L-elsbetiae_contig5195.13281.1 vs. uniprot
Match: A0A7S3CVV7_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3CVV7_9EUKA) HSP 1 Score: 91.3 bits (225), Expect = 2.060e-19 Identity = 42/100 (42.00%), Postives = 55/100 (55.00%), Query Frame = 2 Query: 11 ICSDACKCVNCLNSDAHGAERRAAVRELLCRSPHAFDAKFKTEVLAANGGTGTSRAV-------VHNTGCGCSKSACLKRYCECFNGGIACSDKCRCKDC 289 +C+ C C NC N D+H ER A + +L R P+AF K K V+ G G V VH GC C KS C K+YCECF G+ C+D+C+C+ C Sbjct: 152 MCTVECNCQNCHNCDSHNGERMAVINTILERDPNAFKPKVKRGVVQGGAGEGGGAVVPGGDDQHVHIKGCRCKKSGCTKKYCECFQAGVKCTDRCKCEKC 251 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5195.13281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5195.13281.1 >prot_L-elsbetiae_contig5195.13281.1 ID=prot_L-elsbetiae_contig5195.13281.1|Name=mRNA_L-elsbetiae_contig5195.13281.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=97bp GAAHLLRRLQVRQLPQLRRSRRGAAGRRAGAPLPQPPRLRRQVQDGGACGback to top mRNA from alignment at L-elsbetiae_contig5195:9151..10107+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5195.13281.1 ID=mRNA_L-elsbetiae_contig5195.13281.1|Name=mRNA_L-elsbetiae_contig5195.13281.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=957bp|location=Sequence derived from alignment at L-elsbetiae_contig5195:9151..10107+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5195:9151..10107+ >mRNA_L-elsbetiae_contig5195.13281.1 ID=mRNA_L-elsbetiae_contig5195.13281.1|Name=mRNA_L-elsbetiae_contig5195.13281.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=582bp|location=Sequence derived from alignment at L-elsbetiae_contig5195:9151..10107+ (Laminarionema elsbetiae ELsaHSoW15)back to top |