mRNA_L-elsbetiae_contig5195.13280.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5195.13280.1 vs. uniprot
Match: A0A6H5K6D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6D4_9PHAE) HSP 1 Score: 232 bits (592), Expect = 1.240e-67 Identity = 119/140 (85.00%), Postives = 129/140 (92.14%), Query Frame = 1 Query: 1 GGRNGGGDGLLFPPGFFSDTDLHLHVPAGGVSKDGPSAGVALTSALLSLLLGRAIDPAVAMTGEITLRGLVLPVGGVRDKVLAARRGGIRHILLPARNRGDLDGLPREAAEGLRFTFVDSVGDVLFALFQAEEERIDVSP 420 G +GGG G+LFPPGFFS+TDLHLHVPAGGVSKDGPSAGVA+TSALLSLLLGRAID AVAMTGEITLRGLVLPVGGVRDKVLAARRGGIRHILLP+RNRGDL+ +P EAAEGLRFTFV+S+GDVLFALF + IDVSP Sbjct: 895 GNEDGGGRGVLFPPGFFSNTDLHLHVPAGGVSKDGPSAGVAITSALLSLLLGRAIDTAVAMTGEITLRGLVLPVGGVRDKVLAARRGGIRHILLPSRNRGDLEEIPSEAAEGLRFTFVESIGDVLFALFPTGDG-IDVSP 1033
BLAST of mRNA_L-elsbetiae_contig5195.13280.1 vs. uniprot
Match: D8LGC2_ECTSI (Lon protease homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGC2_ECTSI) HSP 1 Score: 231 bits (589), Expect = 3.830e-67 Identity = 118/138 (85.51%), Postives = 127/138 (92.03%), Query Frame = 1 Query: 7 RNGGGDGLLFPPGFFSDTDLHLHVPAGGVSKDGPSAGVALTSALLSLLLGRAIDPAVAMTGEITLRGLVLPVGGVRDKVLAARRGGIRHILLPARNRGDLDGLPREAAEGLRFTFVDSVGDVLFALFQAEEERIDVSP 420 +GGG G+LFPPGFFS TDLHLHVPAGGVSKDGPSAGVA+TSALLSLLLGRAID AVAMTGEITLRGLVLPVGGVRDKVLAARRGGIRHILLP+RNRGDL+ +P EAAEGLRFTFV+S+GDVLFALF + IDVSP Sbjct: 950 EDGGGRGVLFPPGFFSSTDLHLHVPAGGVSKDGPSAGVAITSALLSLLLGRAIDTAVAMTGEITLRGLVLPVGGVRDKVLAARRGGIRHILLPSRNRGDLEEIPSEAAEGLRFTFVESIGDVLFALFPTGDG-IDVSP 1086
BLAST of mRNA_L-elsbetiae_contig5195.13280.1 vs. uniprot
Match: A0A349ULG9_9BACT (Endopeptidase La (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A349ULG9_9BACT) HSP 1 Score: 139 bits (349), Expect = 1.070e-38 Identity = 69/112 (61.61%), Postives = 87/112 (77.68%), Query Frame = 1 Query: 61 DLHLHVPAGGVSKDGPSAGVALTSALLSLLLGRAIDPAVAMTGEITLRGLVLPVGGVRDKVLAARRGGIRHILLPARNRGDLDGLPREAAEGLRFTFVDSVGDVLFALFQAE 396 D+H+HVPAG V KDGPSAGV++ +AL SLL RA+ P VAMTGE+TLRGLVLPVGG+++KVLAARR GI ++LP RNR DL +P +A + LRF F SV DVL A +++ Sbjct: 33 DIHVHVPAGAVPKDGPSAGVSMFTALTSLLTDRAVRPDVAMTGEVTLRGLVLPVGGIKEKVLAARRAGIGTVILPERNRNDLVDVPTDARKDLRFVFARSVDDVLKAAIRSD 144
BLAST of mRNA_L-elsbetiae_contig5195.13280.1 vs. uniprot
Match: A0A835ZDR9_9STRA (Lon protease C-terminal proteolytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDR9_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.220e-38 Identity = 69/114 (60.53%), Postives = 91/114 (79.82%), Query Frame = 1 Query: 58 TDLHLHVPAGGVSKDGPSAGVALTSALLSLLLGRAIDPAVAMTGEITLRGLVLPVGGVRDKVLAARRGGIRHILLPARNRGDLDGLPREAAEGLRFTFVDSVGDVLFALFQAEE 399 TD+H+HVPAG KDGPSAG+A+ S+LLSLL+GR+IDP V +TGE+TLRGLVLPVGGV+DKVLAA RGG+RH++LP RNR DL+ LP + + LRF+ V ++ + LF + + Sbjct: 816 TDIHIHVPAGATPKDGPSAGIAIASSLLSLLIGRSIDPTVGVTGEVTLRGLVLPVGGVKDKVLAAHRGGLRHVILPQRNRRDLEDLPADVRDALRFSCVSTLLEAFQVLFTSAD 929
BLAST of mRNA_L-elsbetiae_contig5195.13280.1 vs. uniprot
Match: UPI001E49CA6B (endopeptidase La n=1 Tax=Roseomonas sp. OT10 TaxID=2897332 RepID=UPI001E49CA6B) HSP 1 Score: 149 bits (377), Expect = 1.360e-38 Identity = 74/131 (56.49%), Postives = 93/131 (70.99%), Query Frame = 1 Query: 13 GGGDGLLFPPGFFSDTDLHLHVPAGGVSKDGPSAGVALTSALLSLLLGRAIDPAVAMTGEITLRGLVLPVGGVRDKVLAARRGGIRHILLPARNRGDLDGLPREAAEGLRFTFVDSVGDVLFALFQAEEER 405 G + + P F D+H+HVPAG KDGPSAGVA+ AL SL+LGRA+DPA+AMTGEI+LRGLVLPVGG+R+KV+AA R GI ++LPARNR D D +P A E LRF ++++V D L A E R Sbjct: 665 GRAEAMGIDPSLFEKRDIHVHVPAGATPKDGPSAGVAMFLALSSLMLGRAVDPAIAMTGEISLRGLVLPVGGIREKVVAAARAGITTVMLPARNRRDFDDIPASAREKLRFVWLETVEDALAAALPGVEAR 795
BLAST of mRNA_L-elsbetiae_contig5195.13280.1 vs. uniprot
Match: A0A7V1NTT1_9CHLR (Endopeptidase La n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V1NTT1_9CHLR) HSP 1 Score: 142 bits (358), Expect = 1.550e-38 Identity = 68/126 (53.97%), Postives = 89/126 (70.63%), Query Frame = 1 Query: 28 LLFPPGFFSDTDLHLHVPAGGVSKDGPSAGVALTSALLSLLLGRAIDPAVAMTGEITLRGLVLPVGGVRDKVLAARRGGIRHILLPARNRGDLDGLPREAAEGLRFTFVDSVGDVLFALFQAEEER 405 L P GFF +TD+HLHVPAG + KDGPSAGV + +AL+SLL GR + V MTGEITLRG VLPVGGV++KVLAA R G++ ++LP RN DL+ +P E + L+F V+ V +V A + + R Sbjct: 148 LGIPEGFFENTDIHLHVPAGAIPKDGPSAGVTIATALVSLLTGRKVRSDVGMTGEITLRGQVLPVGGVKEKVLAAHRAGLKQVVLPKRNERDLEDIPAEVRKALKFVLVERVDEVFRAALEPDGRR 273
BLAST of mRNA_L-elsbetiae_contig5195.13280.1 vs. uniprot
Match: X1W1S5_9ZZZZ (Lon proteolytic domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1W1S5_9ZZZZ) HSP 1 Score: 138 bits (347), Expect = 2.070e-38 Identity = 66/116 (56.90%), Postives = 88/116 (75.86%), Query Frame = 1 Query: 28 LLFPPGFFSDTDLHLHVPAGGVSKDGPSAGVALTSALLSLLLGRAIDPAVAMTGEITLRGLVLPVGGVRDKVLAARRGGIRHILLPARNRGDLDGLPREAAEGLRFTFVDSVGDVL 375 L P F D H+HVPAG V KDGPSAG A+ ++L+SLLLG+ P VAMTGEITLRGLVLPVGG+++K+LAA++ GI+ ++LPARN+ DL +P+EA +GL+F FV + + L Sbjct: 39 LKIDPNRFRKFDYHIHVPAGAVPKDGPSAGAAMFTSLVSLLLGKQTRPDVAMTGEITLRGLVLPVGGLKEKILAAKQAGIKTVILPARNKKDLPEVPKEAKKGLKFKFVKNTNEAL 154
BLAST of mRNA_L-elsbetiae_contig5195.13280.1 vs. uniprot
Match: A0A011PYB7_9PROT (Endopeptidase La n=2 Tax=unclassified Candidatus Accumulibacter TaxID=2619054 RepID=A0A011PYB7_9PROT) HSP 1 Score: 137 bits (346), Expect = 2.460e-38 Identity = 68/111 (61.26%), Postives = 84/111 (75.68%), Query Frame = 1 Query: 43 GFFSDTDLHLHVPAGGVSKDGPSAGVALTSALLSLLLGRAIDPAVAMTGEITLRGLVLPVGGVRDKVLAARRGGIRHILLPARNRGDLDGLPREAAEGLRFTFVDSVGDVL 375 G F +++H+HVPAG + KDGPSAGVA+ AL SL + +A+ AMTGEI+LRGLVLPVGG++DKVLAA R GI +LLPARNR DLD +P EA E L F F+DSV D + Sbjct: 24 GSFEKSNVHVHVPAGAIPKDGPSAGVAIFVALASLFIDQAVRNDTAMTGEISLRGLVLPVGGIKDKVLAAMRAGITRVLLPARNRRDLDEVPAEAREKLEFVFLDSVDDAM 134
BLAST of mRNA_L-elsbetiae_contig5195.13280.1 vs. uniprot
Match: X1PMU1_9ZZZZ (Lon proteolytic domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1PMU1_9ZZZZ) HSP 1 Score: 137 bits (344), Expect = 4.370e-38 Identity = 63/109 (57.80%), Postives = 88/109 (80.73%), Query Frame = 1 Query: 49 FSDTDLHLHVPAGGVSKDGPSAGVALTSALLSLLLGRAIDPAVAMTGEITLRGLVLPVGGVRDKVLAARRGGIRHILLPARNRGDLDGLPREAAEGLRFTFVDSVGDVL 375 F +D H+HVPAG + KDGPSAG+A+ ++L+SLLLG+A+ P VAMTGEITLRGLVLPVGG+++K+LAA++ GI+ I+LP RN+ D+ +P EA +GL+F FV + + L Sbjct: 36 FKKSDYHIHVPAGAIPKDGPSAGIAMFTSLVSLLLGKAVRPDVAMTGEITLRGLVLPVGGLKEKILAAKQAGIKTIILPQRNKKDIPEVPTEAKKGLQFRFVKNTTEAL 144
BLAST of mRNA_L-elsbetiae_contig5195.13280.1 vs. uniprot
Match: A0A660ZL03_9BACT (Endopeptidase La (Fragment) n=2 Tax=Candidatus Hydrothermae bacterium TaxID=2250085 RepID=A0A660ZL03_9BACT) HSP 1 Score: 145 bits (367), Expect = 5.450e-38 Identity = 68/122 (55.74%), Postives = 92/122 (75.41%), Query Frame = 1 Query: 22 DGLLFPPGFFSDTDLHLHVPAGGVSKDGPSAGVALTSALLSLLLGRAIDPAVAMTGEITLRGLVLPVGGVRDKVLAARRGGIRHILLPARNRGDLDGLPREAAEGLRFTFVDSVGDVLFALF 387 D L P FF D+H+HVPAG + KDGPSAG+A+ +AL+SLL G A+DP +AMTGEITLRG V+PVGG+++KV+AA+R GI+ ++LP N DL +P+ +GL F +VD+V DVL A+F Sbjct: 389 DELGIDPKFFEKYDIHIHVPAGAIPKDGPSAGIAMFTALVSLLTGEAVDPELAMTGEITLRGKVMPVGGIKEKVIAAKRAGIKRVILPRWNEKDLGEIPKHIRKGLEFIYVDNVRDVLRAVF 510 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5195.13280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5195.13280.1 >prot_L-elsbetiae_contig5195.13280.1 ID=prot_L-elsbetiae_contig5195.13280.1|Name=mRNA_L-elsbetiae_contig5195.13280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=179bp GGRNGGGDGLLFPPGFFSDTDLHLHVPAGGVSKDGPSAGVALTSALLSLLback to top mRNA from alignment at L-elsbetiae_contig5195:794..1871+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5195.13280.1 ID=mRNA_L-elsbetiae_contig5195.13280.1|Name=mRNA_L-elsbetiae_contig5195.13280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1078bp|location=Sequence derived from alignment at L-elsbetiae_contig5195:794..1871+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5195:794..1871+ >mRNA_L-elsbetiae_contig5195.13280.1 ID=mRNA_L-elsbetiae_contig5195.13280.1|Name=mRNA_L-elsbetiae_contig5195.13280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1074bp|location=Sequence derived from alignment at L-elsbetiae_contig5195:794..1871+ (Laminarionema elsbetiae ELsaHSoW15)back to top |