mRNA_L-elsbetiae_contig5183.13267.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5183.13267.1
Unique NamemRNA_L-elsbetiae_contig5183.13267.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig5183.13267.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 2.010e-38
Identity = 97/211 (45.97%), Postives = 121/211 (57.35%), Query Frame = 1 
Query:   10 RFEEGELSPLDAAAGFGRTDTMRLLVEHGTDVNAAGAGGRTSLYWCVYAGKAKAVDLLAEAGANLEARTSGGDFVGLAPLHLAIFWR-KFDAAV--ALLKHGADVNVKSVDEGGTP-LHYAAAGAGMQGMARVVDLLLRMGADETIVTNQGRTPMDIVAPTGAVAYHGQQQGSYAYNLERVRLLLANAPADRAWRRRGFLVMCRAHADRMQ 630
            R+ + E+S LD  AG G  D +R L+EHG DV+A   GG  +L+      K +A+D+L  AGAN  + +  G  V    LH+A   R + +AA    LLKHGADVN ++V  GGT  L Y A  AG QG+  VVDLLLR GADET V   G    D      A+     ++       E VR LLANAPADRAWRRR  LV+CRA  D+MQ
Sbjct:  155 RYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTV----LHMAAITRTRTEAATLAVLLKHGADVNAQTV--GGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAAD------AIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQ 353
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BLAST of mRNA_L-elsbetiae_contig5183.13267.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 3.790e-33
Identity = 85/175 (48.57%), Postives = 106/175 (60.57%), Query Frame = 1 
Query:   91 HGTDVNAAGAGGRTSLYWCVYAGKAKAVDLLAEAGANLEARTSGGDFVGLAPLHLAIFWRKFDAAVALLKHGADVNVKSVDEGGTPLHYAAAGAGMQGMARVVDLLLRMGADETIVTNQGRTPMDIVAPTGAVAYHGQQQGSYAYNLERVRLLLANAPADRAWRRRGFLVMCRAH 615
            HG DVNA    G T+L       KA A+D+L EAGAN+EA+ +G       PLH+A    +  A +ALL+HGA V  K+     TPLH  AA AG  G A +VDLLLR GADET V+  G T  D+V          ++  S A +++RVR LLA APADRAWRRRGFL++ RAH
Sbjct:  546 HGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQANGS-----TPLHVASQEGRLAAGIALLRHGASVGKKNA-AAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVV------LKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAH 708
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BLAST of mRNA_L-elsbetiae_contig5183.13267.1 vs. uniprot
Match: D7G0W2_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W2_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 6.250e-33
Identity = 83/214 (38.79%), Postives = 112/214 (52.34%), Query Frame = 1 
Query:    1 LTIRFEEGELSPLDAAAGFGRTDTMRLLVEHGTDVNAAGAGGRTSLYWCVYAGKAKAVDLLAEAGANLEARTSGGDFVGLAPLHLAIFWRKFDAAV-ALLKHGADVNVKSVDEGGTPLHYAAAGAGMQGMARVVDLLLRMGADETIVTNQGRTPMDIVAPTGAVAYHGQQQGSYAYNLERVRLLLANAPADRA---WRRRGFLVMCRAHADRMQ 630
            + +R      SPLD +      D  R +++ G     + + G T+L+W  +   A A+DLL  AGANLEA+ +        PLHLA       A + AL +HGADV+ +    G TPLH AA     +     VD LL+ GADET +  QG+TP+D++    A    G   G+     ER R +L NAP DRA   W RR F VMCRAH DR++
Sbjct:    7 VNVRDGSNGYSPLDCSVRSDGMDLTRQVLQRGAIATESSSDGCTALHWAGWNMNASAIDLLVGAGANLEAKIAAD--AEATPLHLAARQAGNAAVIEALARHGADVHAQETPSGNTPLHVAAQNCTTESSWETVDALLKAGADETRLDCQGQTPLDVLEARIAA---GDLMGASVNEAERTRSVLVNAPKDRAQRAWSRRSFFVMCRAHPDRVR 215
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BLAST of mRNA_L-elsbetiae_contig5183.13267.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 1.410e-29
Identity = 83/197 (42.13%), Postives = 110/197 (55.84%), Query Frame = 1 
Query:   31 SPLDAAAGFGRTDTMRLLVEHGTDVNAAGAGGRTSLYWCVYAGKAKAVDLLAEAGANLEARTSGGDFVGLAPLHLAIFWRKFDAAVALLKHGADVNVKSVDEGGTPLHYAAAGAGMQGMARVVDLLLRMGADETIVTNQGRTPMDIVAPTGAVAYHGQQQGSYAYN---LERVRLLLANAPADRAWRRRGFLVMCRA 612
            S LD AA  G    +R +++HG DVN     G TSL+      +  A+D+L EAGA++E      D     P   A      +AA+AL KHG+++  + +  G TPL  AA  AG QG+  +VD+LLR GADET +   GRT  ++V        H  +  +   N   +ERVR LL NAP DRAWRRRGFLV+CRA
Sbjct:  109 SVLDLAAQKGDACVLRAILQHGVDVNRR-TDGYTSLHVAALNNRVAAIDVLVEAGAHVEVE----DDDDCTPFLDACINHCHEAALALYKHGSNIEARDI-RGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVG-------HHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRA 292
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BLAST of mRNA_L-elsbetiae_contig5183.13267.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 2.010e-29
Identity = 85/197 (43.15%), Postives = 110/197 (55.84%), Query Frame = 1 
Query:   31 SPLDAAAGFGRTDTMRLLVEHGTDVNAAGAGGRTSLYWCVYAGKAKAVDLLAEAGANLEARTSGGDFVGLAPLHLAIFWRKFDAAVALLKHGADVNVKSVDEGGTPLHYAAAGAGMQGMARVVDLLLRMGADETIVTNQGRTPMDIVAPTGAVAYHGQQQGSYAYN---LERVRLLLANAPADRAWRRRGFLVMCRA 612
            S LD AA  G    +R +++HG DVN     G TSL+      +  A+D+L EAGA++E      D     P   A      +AA+AL KHGA++  + +  G TPL  AA  AG QG+  +VD+LLR GADET +   GRT  ++V        H  +  +   N   LERVR LL NAPADRAWRRRG LV+CRA
Sbjct:  158 SVLDFAAQKGDACVLRAILQHGVDVNRR-TDGYTSLHVAALNNRVAAIDVLVEAGAHVEVE----DDDDCTPFLDACSNHCHEAALALFKHGANIEARDM-RGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVG-------HHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341
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BLAST of mRNA_L-elsbetiae_contig5183.13267.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 1.110e-26
Identity = 88/235 (37.45%), Postives = 121/235 (51.49%), Query Frame = 1 
Query:   28 LSPLDAAAGFGRTDTMRLLVEHGTDVNAAGAGGRTSLYWCVYAGKAKAVDLLAEAGANLEARTSGGDFVGLAPLHLAIFWRKFDAAVALLKHGADVNVKSVDEGGTPLHYAAAGAGMQGMARVVDLLLRMGADETIVTNQGRTPMDIVAPTGAVAYHGQQQG-----------------SYAYNLERVRLLLANAPADRAWRRRGFLVMCRAHADRMQ--PQRLSGQPRGGTAWG 675
            ++ +D A   G    +  +VE+G +V A    G T+L+   +A  A+AVD+L +AGA++ A+       G  PL + +     +A VALLK G +VN    + GG    +   G+  +GM R+VDLLLR GA ET V   G TP DI+  T A  YH +  G                 S    ++R R+LLA APADR WRRR +LVM RA A+R +  P   SG  R   A G
Sbjct:  244 MTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALH---HARGAQAVDVLLDAGADVNAKACPA-LHGFTPLSVCVMDNSCEAVVALLKRGGNVN--DTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTA-EYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGRGAPSSGSGSDRTEAATG 471
[Close]
BLAST of mRNA_L-elsbetiae_contig5183.13267.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 4.580e-26
Identity = 78/210 (37.14%), Postives = 104/210 (49.52%), Query Frame = 1 
Query:    1 LTIRFEEGELSPLDAAAGFGRTDTMRLLVEHGTDVNAAGAGGRTSLYWCVYAGKAKAVDLLAEAGANLEARTSGGDFVGLAPLHLAIFWRKFDAAVALLKHGADVNVKSVDEGGTPLHYAAAGAGMQGMARVVDLLLRMGADETIVTNQGRTPMDIVAPTGAVAYHGQQQGSYAYNLERVRLLLANAPADRAWRRRGFLVMCRAHADRMQ 630
            LT+R  E ++S LD AA     + +R+L++HG +VN A A G T+L+W   A +A A+D+L  AGA+++AR   G      PL                                     A     +G  +VV LLLR GADETIV  QG+T  D +   G   +   + G      ER R LL  APADRAWRRRG LV+C A+ DR+Q
Sbjct:  162 LTVRLNEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFG-TALHWAAKANRANAIDVLVGAGADIQARNMSGS----RPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRI---GTRRFPSTEPGDD----ERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQ 359
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BLAST of mRNA_L-elsbetiae_contig5183.13267.1 vs. uniprot
Match: D7G1A4_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1A4_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 1.590e-23
Identity = 77/189 (40.74%), Postives = 94/189 (49.74%), Query Frame = 1 
Query:   37 LDAAAGFGRTDTMRLLVEHGTDVNAAGAGGRTSLYWCVYAGKAKAVDLLAEAGANLEARTSGGDFVGLAPLHLAIFWRKFDAAVALLKHGADVNVKSVD-EGGTPLHYAAAGAGMQGMARVVDLLLRMGADETIVTNQGRTPMDIVAPTGAVAYHGQQQGSYAYNLER----VRLLLANAPADRAWRRR 588
            LD AAG G  D +  L+  G  V A    GRT+L   V + K +AVD LAEAGA++EA      +  L   H A      +    LLKH ADV+ +  D +  TPLH A   AG+QG   +V  LL  GADE    + G TP  +V    AV        +    LE     V  LLA APADRAWRRR
Sbjct:  544 LDLAAGAGHVDAITALIRAGAPVGARDGDGRTALICAVKSNKPRAVDALAEAGADVEAHLVDESWTSL---HSAAEDTHLEVVRVLLKHRADVHARDADNDNDTPLHVAVRQAGVQGAVEIVQELLLHGADEGKKNDSGLTPASVVGSAAAVGLFDSVDPALLPVLELPAQVVAYLLARAPADRAWRRR 729
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BLAST of mRNA_L-elsbetiae_contig5183.13267.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 1.200e-22
Identity = 78/210 (37.14%), Postives = 109/210 (51.90%), Query Frame = 1 
Query:   37 LDAAAGFGRTDTMRLLVEHGTDVN--AAGAGGRTSLYWCVYAGKAKAVDLLAEAGANLEARTSGGDFVGLAPLHLAIFWRKFDAAVALLKHGADVNVKSVDEGGTPLHYAAAGAGMQGMARVVDLLLRMGADETIVTNQGRTPMDIVAPTGAVAYHGQQQGSYAYNLERVRLLLANAPADRAWRRRGFLVMCRAHADRMQPQRLSGQPRG 660
            ++ A   G    ++  +EHG D +  A  A G T+L+      +A+AV++L EAGA+ +  +  G      PL  A      +A   LL++GAD N K  D G  PLH AA      G+  VVDLLLR GA ET V   G TP ++            ++ + A       +LLA APADRAWRRRG++VM RA   R + +R++ Q RG
Sbjct:  171 INVATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADVESLPGSPCYDTPLLAAAESMSNEALRVLLRNGADPN-KPDDNGSMPLHLAAHEQ-TPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGAL------VLLARAPADRAWRRRGWVVMLRA---RSETERIAAQRRG 369
[Close]
BLAST of mRNA_L-elsbetiae_contig5183.13267.1 vs. uniprot
Match: Q8QNP0_ESV1K (EsV-1-21 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNP0_ESV1K)

HSP 1 Score: 102 bits (254), Expect = 2.130e-21
Identity = 73/194 (37.63%), Postives = 96/194 (49.48%), Query Frame = 1 
Query:   22 GELSPLDAAAGFGRTDTMRLLVEHGTDVNAAGAGGRTSLYWCVYAGKAKAVDLLAEAGANLEARTSGGDFVGLAPLHLAIFWRKFDAAVALLKHGADVNVKSVDEGGTPLHYAAAGAGMQGMARVVDLLLRMGADETIVTNQGRTPMDIVAPTGAVAYHGQQQGSYAYNLERVRLLLANAPADRAWRRRGFLVM 603
            G+ + L AAA  G  D +  L+++   ++       T L W            L EAGAN  A     D +G + L    +    D A+ LL++GADVN      G + LH A           +VDLLLR GADET+V ++GRTP+D+          G +    A   ERVR LL NAPADR WRRRG+LVM
Sbjct:  295 GQATALHAAASGGHNDVVNYLLDNSVRIDPDDKNMMTPLMWSAMKNHLCVSATLLEAGANASAE----DQMGESSLSSDSWSCSVDMALLLLRYGADVNASGGLFGSSALHNAIKNR--DNTEAMVDLLLRWGADETVVDDRGRTPLDVFTS-------GTRFQRTAETKERVRKLLVNAPADRTWRRRGWLVM 475
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5183.13267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKL4_ECTSI2.010e-3845.97Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5JHY9_9PHAE3.790e-3348.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0W2_ECTSI6.250e-3338.79Ankyrin repeat domain protein n=1 Tax=Ectocarpus s... [more]
D7G6X8_ECTSI1.410e-2942.13Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KNU3_9PHAE2.010e-2943.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1F4_9PHAE1.110e-2637.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G137_ECTSI4.580e-2637.14Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G1A4_ECTSI1.590e-2340.74Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7FSI6_ECTSI1.200e-2237.14Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
Q8QNP0_ESV1K2.130e-2137.63EsV-1-21 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5183contigL-elsbetiae_contig5183:2961..3674 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score149.4
Seed ortholog evalue2.1e-33
Seed eggNOG ortholog2880.D7FKL4
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons1
Model size714
Cds size714
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816530.7615964-CDS-L-elsbetiae_contig5183:2960..36741622816530.7615964-CDS-L-elsbetiae_contig5183:2960..3674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5183 2961..3674 +
1691683626.7543554-CDS-L-elsbetiae_contig5183:2960..36741691683626.7543554-CDS-L-elsbetiae_contig5183:2960..3674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5183 2961..3674 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5183.13267.1prot_L-elsbetiae_contig5183.13267.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5183 2961..3674 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5183.13267.1

>prot_L-elsbetiae_contig5183.13267.1 ID=prot_L-elsbetiae_contig5183.13267.1|Name=mRNA_L-elsbetiae_contig5183.13267.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp
LTIRFEEGELSPLDAAAGFGRTDTMRLLVEHGTDVNAAGAGGRTSLYWCV
YAGKAKAVDLLAEAGANLEARTSGGDFVGLAPLHLAIFWRKFDAAVALLK
HGADVNVKSVDEGGTPLHYAAAGAGMQGMARVVDLLLRMGADETIVTNQG
RTPMDIVAPTGAVAYHGQQQGSYAYNLERVRLLLANAPADRAWRRRGFLV
MCRAHADRMQPQRLSGQPRGGTAWGGCSCTRKATADGG
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mRNA from alignment at L-elsbetiae_contig5183:2961..3674+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5183.13267.1 ID=mRNA_L-elsbetiae_contig5183.13267.1|Name=mRNA_L-elsbetiae_contig5183.13267.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=714bp|location=Sequence derived from alignment at L-elsbetiae_contig5183:2961..3674+ (Laminarionema elsbetiae ELsaHSoW15)
CTTACCATTCGCTTTGAAGAGGGAGAGCTTTCGCCGCTCGACGCCGCCGC
GGGGTTCGGGCGTACGGACACGATGAGATTGCTGGTGGAGCACGGAACGG
ATGTCAATGCTGCTGGCGCCGGCGGTCGGACGTCGCTGTACTGGTGCGTT
TACGCAGGCAAGGCGAAGGCGGTCGATCTGCTCGCGGAGGCTGGAGCCAA
CTTGGAAGCTCGGACTTCGGGGGGAGACTTCGTCGGCTTGGCGCCTCTCC
ACCTCGCTATTTTTTGGCGCAAGTTCGATGCTGCCGTCGCACTCCTGAAG
CACGGCGCCGATGTCAACGTGAAAAGTGTCGACGAGGGTGGGACCCCGTT
GCACTATGCAGCAGCCGGGGCCGGGATGCAAGGCATGGCAAGAGTGGTAG
ACCTGCTGCTGAGAATGGGTGCTGACGAAACAATCGTGACCAATCAGGGC
CGAACGCCCATGGATATCGTCGCGCCCACGGGTGCCGTCGCTTACCACGG
CCAGCAACAGGGGAGCTATGCATATAATCTCGAGCGCGTGCGATTGCTGC
TGGCCAACGCTCCGGCCGACAGGGCATGGCGCCGCCGGGGCTTTCTAGTC
ATGTGCCGTGCTCACGCGGACAGGATGCAGCCGCAACGGCTAAGCGGCCA
GCCTCGTGGCGGCACTGCGTGGGGGGGCTGCAGTTGTACGAGGAAAGCAA
CGGCAGATGGGGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5183:2961..3674+

>mRNA_L-elsbetiae_contig5183.13267.1 ID=mRNA_L-elsbetiae_contig5183.13267.1|Name=mRNA_L-elsbetiae_contig5183.13267.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1428bp|location=Sequence derived from alignment at L-elsbetiae_contig5183:2961..3674+ (Laminarionema elsbetiae ELsaHSoW15)
CTTACCATTCGCTTTGAAGAGGGAGAGCTTTCGCCGCTCGACGCCGCCGC
GGGGTTCGGGCGTACGGACACGATGAGATTGCTGGTGGAGCACGGAACGG
ATGTCAATGCTGCTGGCGCCGGCGGTCGGACGTCGCTGTACTGGTGCGTT
TACGCAGGCAAGGCGAAGGCGGTCGATCTGCTCGCGGAGGCTGGAGCCAA
CTTGGAAGCTCGGACTTCGGGGGGAGACTTCGTCGGCTTGGCGCCTCTCC
ACCTCGCTATTTTTTGGCGCAAGTTCGATGCTGCCGTCGCACTCCTGAAG
CACGGCGCCGATGTCAACGTGAAAAGTGTCGACGAGGGTGGGACCCCGTT
GCACTATGCAGCAGCCGGGGCCGGGATGCAAGGCATGGCAAGAGTGGTAG
ACCTGCTGCTGAGAATGGGTGCTGACGAAACAATCGTGACCAATCAGGGC
CGAACGCCCATGGATATCGTCGCGCCCACGGGTGCCGTCGCTTACCACGG
CCAGCAACAGGGGAGCTATGCATATAATCTCGAGCGCGTGCGATTGCTGC
TGGCCAACGCTCCGGCCGACAGGGCATGGCGCCGCCGGGGCTTTCTAGTC
ATGTGCCGTGCTCACGCGGACAGGATGCAGCCGCAACGGCTAAGCGGCCA
GCCTCGTGGCGGCACTGCGTGGGGGGGCTGCAGTTGTACGAGGAAAGCAA
CGGCAGATGGGGGCCTTACCATTCGCTTTGAAGAGGGAGAGCTTTCGCCG
CTCGACGCCGCCGCGGGGTTCGGGCGTACGGACACGATGAGATTGCTGGT
GGAGCACGGAACGGATGTCAATGCTGCTGGCGCCGGCGGTCGGACGTCGC
TGTACTGGTGCGTTTACGCAGGCAAGGCGAAGGCGGTCGATCTGCTCGCG
GAGGCTGGAGCCAACTTGGAAGCTCGGACTTCGGGGGGAGACTTCGTCGG
CTTGGCGCCTCTCCACCTCGCTATTTTTTGGCGCAAGTTCGATGCTGCCG
TCGCACTCCTGAAGCACGGCGCCGATGTCAACGTGAAAAGTGTCGACGAG
GGTGGGACCCCGTTGCACTATGCAGCAGCCGGGGCCGGGATGCAAGGCAT
GGCAAGAGTGGTAGACCTGCTGCTGAGAATGGGTGCTGACGAAACAATCG
TGACCAATCAGGGCCGAACGCCCATGGATATCGTCGCGCCCACGGGTGCC
GTCGCTTACCACGGCCAGCAACAGGGGAGCTATGCATATAATCTCGAGCG
CGTGCGATTGCTGCTGGCCAACGCTCCGGCCGACAGGGCATGGCGCCGCC
GGGGCTTTCTAGTCATGTGCCGTGCTCACGCGGACAGGATGCAGCCGCAA
CGGCTAAGCGGCCAGCCTCGTGGCGGCACTGCGTGGGGGGGCTGCAGTTG
TACGAGGAAAGCAACGGCAGATGGGGGC
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