mRNA_L-elsbetiae_contig513.13196.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig513.13196.1 vs. uniprot
Match: A0A6H5JAL8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAL8_9PHAE) HSP 1 Score: 455 bits (1171), Expect = 6.070e-136 Identity = 730/869 (84.00%), Postives = 781/869 (89.87%), Query Frame = 2 Query: 2 QGSQSRKAFSTALSLMEEAERAGVEVDAATVDAVLAALGKGKDKDEQLLSLFRRAERRGLGLKRQSYTWAVVAYKRCGRTKEAVDAAASFSERGIVMTVVGWNAAMHAASIAGQPDKALEFLEEAKAKGIKPTEVTYATAIGACARATTDKKASSRKAVFXXXXXXXXXXXXXXXXXXAALTAVASSEGYEAAMELLAKMRAEGTPLTAASYNPALKSAALAGDWQVAISAIDVMAKAAITDKDARPDVVSFNYAIAACAKAGECELAHRILSRMRACGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMQTSGDPALXXXXXXXXXXXXXXXXXXDWALTLWLFGEIKAAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKQSMPCDETTFSSVVHGCAQTRDWKAAARLLKDMRAAGLTPNDSCYYALLAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAEVAGLLVEMMRKRSVELDAAGRAAALVAFGRGGRADKALALMDDMRTNGPPPSLQCFNAAIEACALADDVDGAVSFMAEMG 2608 QGS RK S ALSLMEEA++AGVEVDAAT DA+L ALGK K KDEQLL+LFR+AE RGL LKRQSY WAVVAYKRCG+ KEA+D+A SFSERGIVMTVVGWNAAMHAAS+ G+P KALE LEEAK+KG+KPTEVTYATAIGACA+ATT+ KA++R XXXXXXXXXXXXXX AALTA+A+SEG+ AAM+LLAKMRA GT LT+ASY+P LKSAA GDW+ AI+ IDVM +A++TDKDA PDVV FNYA++ACAKAGECELAHR++SR++ACGLA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMQTSGDPALXXXXXXXXXXXXXXXXXX WALTLWLF EIKAAGL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QSMPCDETTFS+++HGCAQTRDW AA RLL++M AAGL PND+CYY LL A+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GEAE+A +L+EMMR + VELD GR+ ALVAFGRGGR DKALALMD++R NG PP+LQCFN AIEACALADD+DG +S +AEMG Sbjct: 397 QGSPPRKTLSAALSLMEEAQQAGVEVDAATTDAILTALGKAKGKDEQLLALFRQAEERGLRLKRQSYAWAVVAYKRCGKAKEALDSALSFSERGIVMTVVGWNAAMHAASVTGEPGKALELLEEAKSKGVKPTEVTYATAIGACAKATTNVKANARXXXXXXXXXXXXXXXXXXPAHQAALTALAASEGHRAAMDLLAKMRANGTRLTSASYSPVLKSAAQVGDWRNAIALIDVMTRASVTDKDAGPDVVCFNYAMSACAKAGECELAHRVMSRIQACGLAANLVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMQTSGDPALXXXXXXXXXXXXXXXXXXXWALTLWLFSEIKAAGLKADIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSMPCDETTFSAMMHGCAQTRDWDAAGRLLEEMNAAGLKPNDACYYTLLVAACRAGELRLAEGLIKGMCKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEAEIAEILLEMMRSQGVELDDVGRSHALVAFGRGGRPDKALALMDNIRENGSPPNLQCFNGAIEACALADDIDGGMSLLAEMG 1265 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig513.13196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig513.13196.1 >prot_L-elsbetiae_contig513.13196.1 ID=prot_L-elsbetiae_contig513.13196.1|Name=mRNA_L-elsbetiae_contig513.13196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=896bp MEEAERAGVEVDAATVDAVLAALGKGKDKDEQLLSLFRRAERRGLGLKRQback to top mRNA from alignment at L-elsbetiae_contig513:7793..21467- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig513.13196.1 ID=mRNA_L-elsbetiae_contig513.13196.1|Name=mRNA_L-elsbetiae_contig513.13196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=13675bp|location=Sequence derived from alignment at L-elsbetiae_contig513:7793..21467- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig513:7793..21467- >mRNA_L-elsbetiae_contig513.13196.1 ID=mRNA_L-elsbetiae_contig513.13196.1|Name=mRNA_L-elsbetiae_contig513.13196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5376bp|location=Sequence derived from alignment at L-elsbetiae_contig513:7793..21467- (Laminarionema elsbetiae ELsaHSoW15)back to top |