mRNA_L-elsbetiae_contig5119.13182.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5119.13182.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 2.820e-12 Identity = 45/125 (36.00%), Postives = 57/125 (45.60%), Query Frame = 1 Query: 1 WLREPLEHAAAEGNHGLVDKLLGAGADGSAGWKGCQGRSLLYAAVVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NVNFMDPEDKCTILHEAIMGGHEQLAKE 372 WLR PLEHAA+ GN LV++LL AGAD AGW+GC+GR+LL AA +G +VNF DP KC++L +AI G H QL + Sbjct: 33 WLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSSRRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSVLSQAIQGSHTQLVND 157
BLAST of mRNA_L-elsbetiae_contig5119.13182.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 5.710e-12 Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 1 Query: 1 WLREPLEHAAAEGNHGLVDKLLGAGADGSAGWKGCQGRSLLYAAVVG 141 WLR PLEHAAA GN LVDKLLGAGA+G AGW+GC G++LL+AA G Sbjct: 76 WLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEG 122
BLAST of mRNA_L-elsbetiae_contig5119.13182.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI) HSP 1 Score: 72.8 bits (177), Expect = 3.470e-11 Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 1 Query: 1 WLREPLEHAAAEGNHGLVDKLLGAGADGSAGWKGCQGRSLLYAAVVG 141 WLR PLEHAAA GN LV LLGAGADGSAGW+GC+GR+L+ AA +G Sbjct: 33 WLRMPLEHAAARGNLNLVSSLLGAGADGSAGWRGCRGRTLIDAAALG 79
BLAST of mRNA_L-elsbetiae_contig5119.13182.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 72.0 bits (175), Expect = 6.500e-11 Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 1 Query: 1 WLREPLEHAAAEGNHGLVDKLLGAGADGSAGWKGCQGRSLLYAAVVG 141 WLR PLEHAAA GN LVD+LL AG DG AGW+GC+GRSLL AA +G Sbjct: 31 WLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALG 77
BLAST of mRNA_L-elsbetiae_contig5119.13182.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 9.170e-11 Identity = 44/122 (36.07%), Postives = 55/122 (45.08%), Query Frame = 1 Query: 1 WLREPLEHAAAEGNHGLVDKLLGAGADGSAGWKGCQGRSLLYAAVVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NVNFMDPEDKCTILHEAIMGGHEQL 363 WLR PLEHAAA GN GLV++LL AGA+G AGW+GC+GR++L AA +G +VN +DP D C LH A+ G H L Sbjct: 33 WLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDL 154
BLAST of mRNA_L-elsbetiae_contig5119.13182.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI) HSP 1 Score: 71.2 bits (173), Expect = 1.130e-10 Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 1 Query: 1 WLREPLEHAAAEGNHGLVDKLLGAGADGSAGWKGCQGRSLLYAAVVG 141 WLR PLEHAAA GN LV+ LL AGADGSAGWKGC+GR+L+ AA +G Sbjct: 33 WLRVPLEHAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALG 79
BLAST of mRNA_L-elsbetiae_contig5119.13182.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI) HSP 1 Score: 69.7 bits (169), Expect = 3.720e-10 Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 1 Query: 1 WLREPLEHAAAEGNHGLVDKLLGAGADGSAGWKGCQGRSLLYAA 132 WLR PLEHAAA GN GLV++LL AGADG AGW+GC+GR++L AA Sbjct: 33 WLRAPLEHAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLDAA 76
BLAST of mRNA_L-elsbetiae_contig5119.13182.1 vs. uniprot
Match: A0A6H5KKF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF4_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 4.070e-10 Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = 1 Query: 1 WLREPLEHAAAEGNHGLVDKLLGAGADGSAGWKGCQGRSLLYAAVVG 141 WLR PLEHAAA+G+ LVDKLLGAGADGSA +KGC GR L AA VG Sbjct: 16 WLRVPLEHAAAQGSLVLVDKLLGAGADGSANYKGCAGRILRQAAAVG 62
BLAST of mRNA_L-elsbetiae_contig5119.13182.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI) HSP 1 Score: 69.3 bits (168), Expect = 5.280e-10 Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 1 Query: 1 WLREPLEHAAAEGNHGLVDKLLGAGADGSAGWKGCQGRSLLYAAVVG 141 WLR PLEHAA GN LVDKLLGAGA+ AGW+GC G++LL+AA G Sbjct: 34 WLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEG 80
BLAST of mRNA_L-elsbetiae_contig5119.13182.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI) HSP 1 Score: 69.3 bits (168), Expect = 5.750e-10 Identity = 33/47 (70.21%), Postives = 37/47 (78.72%), Query Frame = 1 Query: 1 WLREPLEHAAAEGNHGLVDKLLGAGADGSAGWKGCQGRSLLYAAVVG 141 WLR PLEHAAAEGN L +L+ AGADGSAGW+GC GR+LL AA G Sbjct: 88 WLRAPLEHAAAEGNIDLFTRLMDAGADGSAGWRGCHGRTLLGAAAYG 134 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5119.13182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5119.13182.1 >prot_L-elsbetiae_contig5119.13182.1 ID=prot_L-elsbetiae_contig5119.13182.1|Name=mRNA_L-elsbetiae_contig5119.13182.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp WLREPLEHAAAEGNHGLVDKLLGAGADGSAGWKGCQGRSLLYAAVVGGSEback to top mRNA from alignment at L-elsbetiae_contig5119:6384..7095+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5119.13182.1 ID=mRNA_L-elsbetiae_contig5119.13182.1|Name=mRNA_L-elsbetiae_contig5119.13182.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=712bp|location=Sequence derived from alignment at L-elsbetiae_contig5119:6384..7095+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5119:6384..7095+ >mRNA_L-elsbetiae_contig5119.13182.1 ID=mRNA_L-elsbetiae_contig5119.13182.1|Name=mRNA_L-elsbetiae_contig5119.13182.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=936bp|location=Sequence derived from alignment at L-elsbetiae_contig5119:6384..7095+ (Laminarionema elsbetiae ELsaHSoW15)back to top |