mRNA_L-elsbetiae_contig51.13147.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig51.13147.1 vs. uniprot
Match: A0A6H5JGS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGS5_9PHAE) HSP 1 Score: 258 bits (658), Expect = 1.200e-78 Identity = 128/153 (83.66%), Postives = 141/153 (92.16%), Query Frame = 1 Query: 49 ITSVSPKHKRLMEAGGVSKLHLAVFQGKQDKARKLLEKGCPDVNRGDKFGQTPLHIACHREGLLGCLKLLATHQADLKALDANGNTALHSAAGSGATAAAEFLLGRGLSVADKNKDGHTPIDICNLHCPPDKQPPMKALLRGGAKV-EEDRAA 504 +T+ S KHK+LMEAGGVSKLHLAVFQGKQ+KARKLL+KGCPDVNRGDKFGQTPLHIACHREGLLGCL+LLA H+A+LKALDANGNTALHSAAGSGA AAA+FLLGRGLSVAD+NKDGHTP+DIC LHCP DK+ M+ LL GG KV EEDRAA Sbjct: 2 VTTKSSKHKKLMEAGGVSKLHLAVFQGKQEKARKLLQKGCPDVNRGDKFGQTPLHIACHREGLLGCLQLLAAHEANLKALDANGNTALHSAAGSGAAAAAKFLLGRGLSVADRNKDGHTPMDICMLHCPADKKRTMQLLLEGGVKVGEEDRAA 154
BLAST of mRNA_L-elsbetiae_contig51.13147.1 vs. uniprot
Match: D7FI33_ECTSI (Ankyrin repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI33_ECTSI) HSP 1 Score: 144 bits (364), Expect = 9.010e-40 Identity = 75/93 (80.65%), Postives = 82/93 (88.17%), Query Frame = 1 Query: 226 REGLLGCLKLLATHQADLKALDANGNTALHSAAGSGATAAAEFLLGRGLSVADKNKDGHTPIDICNLHCPPDKQPPMKALLRGGAKV-EEDRA 501 REGLLGCL+LLA H+A+LKALDANGNTALHSAAGSGA AAA+FLLG GLSVADKNKDGHTP+DIC LHCP DK+ M+ LL GG KV EEDRA Sbjct: 13 REGLLGCLQLLAAHEANLKALDANGNTALHSAAGSGAAAAAKFLLGCGLSVADKNKDGHTPMDICTLHCPADKKRTMQLLLEGGVKVGEEDRA 105
BLAST of mRNA_L-elsbetiae_contig51.13147.1 vs. uniprot
Match: A0A0M8ZYZ1_9HYME (Transient receptor potential channel pyrexia (Fragment) n=1 Tax=Melipona quadrifasciata TaxID=166423 RepID=A0A0M8ZYZ1_9HYME) HSP 1 Score: 58.5 bits (140), Expect = 2.690e-6 Identity = 42/112 (37.50%), Postives = 59/112 (52.68%), Query Frame = 1 Query: 85 EAGGVSKLHLAVFQGKQD-KARKLLEKGCPDVNRGDKFGQTPLHIACHREGLLGCLKLLATHQADLKALDANGNTALHSAAGSGATAAAEFLLGRGLSVADKNKDGHTPIDI 417 ++ G + LHLA+ + +LL ++N+ DK+G TPLHIA E L C+ +L H ADL A LH A +GA + LL RG SV +KN G TP+ + Sbjct: 531 DSDGRTPLHLALGRSLLAYDVTELLITWKANINKTDKYGYTPLHIAALNE-LSQCVDVLIQHGADLSAR----TKVLHCAIRAGAVEIVKLLLERGASVVEKNHMGETPLHV 637
BLAST of mRNA_L-elsbetiae_contig51.13147.1 vs. uniprot
Match: UPI0018973739 (B-cell lymphoma 3 protein homolog n=1 Tax=Nematolebias whitei TaxID=451745 RepID=UPI0018973739) HSP 1 Score: 57.8 bits (138), Expect = 3.950e-6 Identity = 41/109 (37.61%), Postives = 56/109 (51.38%), Query Frame = 1 Query: 94 GVSKLHLAVFQGKQDKARKLLEKGCPDVNRGD-KFGQTPLHIACHREGLLGCLKLLATHQADLKALDANGNTALHSAAGSGATAAAEFLLGRGLSVADKNKDGHTPIDI 417 G++ LHLAV QG Q+ A KLL+ G D+N D K GQ+PL A + L ++ D+ + +GNTALH A G G LL G + KN TP+ + Sbjct: 319 GLTPLHLAVLQGHQNLAEKLLDAGA-DINAMDIKSGQSPLMHAVESNNP-DMVHFLIENRCDVNSQSYSGNTALHIACGRGQVDTVRLLLKSGADSSFKNYHNDTPVMV 425
BLAST of mRNA_L-elsbetiae_contig51.13147.1 vs. uniprot
Match: A0A8H3FXW0_9LECA (Uncharacterized protein n=1 Tax=Imshaugia aleurites TaxID=172621 RepID=A0A8H3FXW0_9LECA) HSP 1 Score: 57.8 bits (138), Expect = 4.180e-6 Identity = 38/109 (34.86%), Postives = 60/109 (55.05%), Query Frame = 1 Query: 85 EAGGVSKLHLAVFQGKQDKARKLLEKGCPDVNRGDKFGQTPLHIACHREGLLGCLKLLATHQADLKALDANGNTALHSAAGSGATAAAEFLLGRGLSVADKNKDGHTPI 411 EA V+ LH+A + G +D A++LL+ D++ G T L I G + LK+L AD++ + G TALH +A SG ++ LLG G+ V +++ G TP+ Sbjct: 458 EASSVNGLHVAAYFGLEDLAKQLLDTNAVDIDSATSIGTTAL-IHASASGHVRFLKMLIAKGADVRKENGYG-TALHCSAESGQVSSIIELLGTGIDVNTRDRQGRTPL 564
BLAST of mRNA_L-elsbetiae_contig51.13147.1 vs. uniprot
Match: UPI001FB5CC09 (B-cell lymphoma 3 protein homolog n=1 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB5CC09) HSP 1 Score: 57.0 bits (136), Expect = 7.070e-6 Identity = 46/138 (33.33%), Postives = 60/138 (43.48%), Query Frame = 1 Query: 10 CLPYASQ-CVATMKITSVSPKHKRLMEAGGVSKLHLAVFQGKQDKARKLLEKGCPDVNRGD-KFGQTPLHIACHREGLLGCLKLLATHQADLKALDANGNTALHSAAGSGATAAAEFLLGRGLSVADKNKDGHTPIDI 417 C Y + C++ + S SP + GG+S LHLAV QG+QD A+ LLE G D+N D K GQ + +GNTALHSA G G LL G + KN TP+ + Sbjct: 275 CCEYGQRDCLSVVLSLSSSPLCLEIRNFGGLSPLHLAVLQGRQDLAKMLLEAGA-DINAMDFKSGQXXXXXXXXXXXXXXXXXXXXXXX-XXXSQSYSGNTALHSACGRGQVDTVRLLLKSGADSSIKNNHNDTPVMV 410
BLAST of mRNA_L-elsbetiae_contig51.13147.1 vs. uniprot
Match: A2EGL3_TRIVA (Uncharacterized protein n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2EGL3_TRIVA) HSP 1 Score: 57.0 bits (136), Expect = 8.780e-6 Identity = 37/102 (36.27%), Postives = 56/102 (54.90%), Query Frame = 1 Query: 115 AVFQGKQDKARKLLEKGCPDVNRGDKFGQTPLHIACHREGLLGCLKLLATHQADLKALDANGNTALHSAAGSGATAAAEFLLGRGLSVADKNKDGHTPIDIC 420 A+ +Q+ + LLE+G QTPLH+A G++ +K L ++AD+ A+D GNT LH AA + A L+ RG ++ +N DG T ID+C Sbjct: 231 AIENKRQEIIKVLLEEGVNPKITNQITKQTPLHVAA-AVGVVSIIKQLIENEADIDAVDNEGNTPLHMAAQNCQYQAVSELITRG-AIVKENNDGKTAIDLC 330
BLAST of mRNA_L-elsbetiae_contig51.13147.1 vs. uniprot
Match: C1EFV4_MICCC (Uncharacterized protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EFV4_MICCC) HSP 1 Score: 50.4 bits (119), Expect = 5.620e-5 Identity = 31/76 (40.79%), Postives = 42/76 (55.26%), Query Frame = 1 Query: 187 DKFGQTPLHIACHREGLLGCLKLLATHQADLKALDANGNTALHSAAGSGATAAAEFLLGRGLSVADKNKDGHTPID 414 DKFG TPL +AC + G K+ + AD+ A + NTALH A G A +FL+ +G S +N DG TP + Sbjct: 7 DKFGNTPLLVAC-QNGHGRLAKMCVRYGADVNAANNKRNTALHFAVQYGFDALGDFLVEKGASRDARNDDGRTPYE 81
BLAST of mRNA_L-elsbetiae_contig51.13147.1 vs. uniprot
Match: A0A7S2KQN1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2KQN1_9DINO) HSP 1 Score: 53.9 bits (128), Expect = 7.650e-5 Identity = 42/116 (36.21%), Postives = 56/116 (48.28%), Query Frame = 1 Query: 106 LHLAVFQGKQDKARKLLEKGCPD---VNRGDKFGQTPLHIACHREGLLGCLKLLATHQADLKALDANGNTALHSAAGSGATAAAEFLLGR-----GLSVADKNKDGHTPIDICNLH 429 LH A +G ++ + +L+ G D VN D+ P+ A R G +GCL+LL A+ KA+D GNT LH AAG G A LL G KNK G T D ++ Sbjct: 316 LHEAAMRGDEEALKAILDSGGSDMFKVNAWDQLQIAPMGYAVAR-GHIGCLRLLRDRGANTKAVDGQGNTLLHFAAGYGQLPALRELLESKEFEDGEWKTIKNKRGQTIADAARVN 430 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig51.13147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig51.13147.1 >prot_L-elsbetiae_contig51.13147.1 ID=prot_L-elsbetiae_contig51.13147.1|Name=mRNA_L-elsbetiae_contig51.13147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp CGSCLPYASQCVATMKITSVSPKHKRLMEAGGVSKLHLAVFQGKQDKARKback to top mRNA from alignment at L-elsbetiae_contig51:52165..56282- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig51.13147.1 ID=mRNA_L-elsbetiae_contig51.13147.1|Name=mRNA_L-elsbetiae_contig51.13147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4118bp|location=Sequence derived from alignment at L-elsbetiae_contig51:52165..56282- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig51:52165..56282- >mRNA_L-elsbetiae_contig51.13147.1 ID=mRNA_L-elsbetiae_contig51.13147.1|Name=mRNA_L-elsbetiae_contig51.13147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1392bp|location=Sequence derived from alignment at L-elsbetiae_contig51:52165..56282- (Laminarionema elsbetiae ELsaHSoW15)back to top |