mRNA_L-elsbetiae_contig5086.13123.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5086.13123.1
Unique NamemRNA_L-elsbetiae_contig5086.13123.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: D7FJP9_ECTSI (Rab8D, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJP9_ECTSI)

HSP 1 Score: 401 bits (1031), Expect = 3.190e-139
Identity = 204/223 (91.48%), Postives = 210/223 (94.17%), Query Frame = 3 
Query:  252 MNGL-APAAAGGAKPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVKTRLEVTQAATDAASTGETLRLNGNRNGAGETDSLAQKMESCCT 917
            MNGL APA  G  KPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAK+NLNVEETFG+LASRVKTRLE +QAATD A  GETLRLNG RNG  +T+SL Q+MESCCT
Sbjct:    1 MNGLGAPAVGGAGKPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDGAGAGETLRLNGGRNGGVDTESLTQRMESCCT 223
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BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A835YM14_9STRA (Rab8D, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM14_9STRA)

HSP 1 Score: 250 bits (638), Expect = 1.260e-79
Identity = 131/205 (63.90%), Postives = 156/205 (76.10%), Query Frame = 3 
Query:  300 LLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVKTRLEVTQAATDAASTGETLRLNGNRNGAGETDSLAQKMESCC 914
            LLIR+LMIG+SSVGKTSLVLRYDKRGFN +FTTTIGVDYSDR+L +D R VKLQIWDTAGQERFHSLTTSFFKRAEGF LV+DVS+R+SF++V+ WM DI EQGK  SDVV+ GNKCD++ R VA+ E E+LA    VPY E SAKDN+NV+  F  LAS VK RL+  +AA +A    ET+ L         T +  +K  +CC
Sbjct:   22 LLIRVLMIGESSVGKTSLVLRYDKRGFNAKFTTTIGVDYSDRMLTVDARAVKLQIWDTAGQERFHSLTTSFFKRAEGFALVFDVSDRRSFDAVARWMGDIREQGKADSDVVLVGNKCDVKERAVAKGEAEKLAKHFAVPYFEASAKDNVNVDVIFETLASSVKRRLDA-KAADEAKKASETVTLG--------TAAEPKKKSACC 217
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BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A836CM00_9STRA (Rab8D, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM00_9STRA)

HSP 1 Score: 235 bits (600), Expect = 3.310e-74
Identity = 114/165 (69.09%), Postives = 137/165 (83.03%), Query Frame = 3 
Query:  318 MIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVKTRLEVTQA 812
            MIG+SSVGKTSLVLRYDKRGFN +FTTTIGVDYSDR+L +DG+Q+KLQIWDTAGQERFHSLTTSFFKRAEGFVL +DVS+R SFESV+ WMKDI   GK  SDVV+ GNKCD++ R VA+EE + LAA+  VPY E SAK+++NV+  F  +A+ +K RL+   A
Sbjct:    1 MIGESSVGKTSLVLRYDKRGFNSKFTTTIGVDYSDRMLTIDGKQIKLQIWDTAGQERFHSLTTSFFKRAEGFVLCFDVSDRASFESVARWMKDIEASGKPDSDVVLVGNKCDMKERAVAKEEAQALAAQFRVPYFEASAKEDVNVDAVFSTVANNIKRRLDAKAA 165
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BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A6V1KKE1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KKE1_HETAK)

HSP 1 Score: 208 bits (529), Expect = 2.950e-63
Identity = 106/200 (53.00%), Postives = 143/200 (71.50%), Query Frame = 3 
Query:  285 AKPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG--REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVKTRLEVTQAATDAASTGETLRLNGNRNGAGE 878
            +K  P +IRILM+GDSSVGKTSLV+R+D +GF  ++ TTIGVDYSDRL+E+DG + KLQ+WDTAGQERF +LT+SFFKRA+GF L YD+S+R SF++V+ WMKDI EQ   G ++++ GNKCD+    REVA +EG  LA E G P++E SAK + NV++ F  +AS V  +       +  A T + + L  +R G  E
Sbjct:    7 SKKQPPIIRILMVGDSSVGKTSLVMRFDDKGFLNKYATTIGVDYSDRLVEVDGDEYKLQVWDTAGQERFRALTSSFFKRADGFCLCYDISSRHSFDNVNRWMKDICEQAPSGFNLILVGNKCDVPEARREVAYQEGVDLAGEFGAPFLEASAKTDRNVDDVFMTVASAVVAQKS---GGSRGAGTRQNINLPSSRGGHQE 203
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BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A7S2AY15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AY15_9STRA)

HSP 1 Score: 197 bits (502), Expect = 2.430e-59
Identity = 97/166 (58.43%), Postives = 124/166 (74.70%), Query Frame = 3 
Query:  303 LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG--REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVKTR 794
            ++RILMIGDS VGKTSLVLRYD+  F+ +F TTIGVDY D++++++G+ VKLQIWDTAGQERF SLT++FF RA+G VL YDVS+R S+E + TWM +I +      DVVICG+KCD+    R+V  EEG+ LA + GVPY E SAK N NVE  F  LA+ +  R
Sbjct:   18 VVRILMIGDSGVGKTSLVLRYDEDAFSHKFVTTIGVDYRDKVVQVNGKSVKLQIWDTAGQERFRSLTSNFFSRADGMVLAYDVSDRTSYEHIKTWMSEIRKHAPEDVDVVICGSKCDIDATDRKVTEEEGQTLAEDEGVPYFEASAKANTNVEAMFMQLATTIVDR 183
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BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A7S2SVP5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVP5_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.070e-57
Identity = 98/173 (56.65%), Postives = 125/173 (72.25%), Query Frame = 3 
Query:  273 AAGGAKPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDL--QGREVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRV 785
            AA  A P   ++R+LMIGDS+VGKTSLVLRYD+  F+ +F TTIGVDY D+++++ G  VKLQIWDTAGQERF +LT +FF RA+G VL YDVS R SFE V  W + IVE+      +++CG KCD   + REV++E+GE LA EL +P+ ETSAK N NV E F  LA+ V
Sbjct:    2 AAAMATPKRKVVRLLMIGDSNVGKTSLVLRYDENRFSHKFVTTIGVDYRDKVVDIHGANVKLQIWDTAGQERFRALTANFFSRADGIVLAYDVSKRTSFEGVRRWHEQIVEKAAPEVQMLLCGTKCDCSPEEREVSQEDGESLAKELAIPFFETSAKGNRNVAEAFMTLATAV 174
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BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A7S4JU42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JU42_9STRA)

HSP 1 Score: 192 bits (487), Expect = 4.990e-57
Identity = 103/194 (53.09%), Postives = 131/194 (67.53%), Query Frame = 3 
Query:  255 NGLAPAAAGGAK-----PTPL--------LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVKTR 794
            NG +P   GGA      P PL        ++R+LM+GDSS GKTSLVLR+D+  F+ +F TTIGVDY D+ + ++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YDVSNR SF+ V  WM+DI  +     DVV+CGNK DL   R V+ EEG  LA E GV + ETSA    NVE+ F DLA+ +K R
Sbjct:    4 NGSSPPGQGGAAAANPPPRPLQMGAKGAYIVRLLMVGDSSCGKTSLVLRFDQNVFSTKFVTTIGVDYRDKTVRIEGAPLRLQLWDTAGQERFRSLTSNFFGRADGFVLCYDVSNRPSFDHVHGWMRDIRTRAPPDCDVVLCGNKSDLDADRVVSTEEGAALAEECGVRFFETSALTGNNVEDMFMDLATAIKRR 197
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BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A6S9AIZ9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9AIZ9_9STRA)

HSP 1 Score: 192 bits (488), Expect = 9.840e-57
Identity = 111/238 (46.64%), Postives = 151/238 (63.45%), Query Frame = 3 
Query:  252 MNGLAPAAAGGAKPTPL--------LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVK-TRLEVTQAA------TDAASTG-ETLRLNGNRNGAGETDSLAQKMESCC 914
            M+G     A  A P PL        ++R+LM+GDSS GKTSLVLR+D+  F+ +F TTIGVDY D++++++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YD+SNR SF+ V  WM+DI  +     D+V+CGNK DL   R V  EEG+ LA E GV + E+SA    NVE  F  LA+ +K  R++  +AA       DA++ G  T+ L G    AGET +    +  CC
Sbjct:    1 MSGPGVEQAPPAAPRPLQMGAKGAYIVRLLMVGDSSCGKTSLVLRFDQNVFSTKFVTTIGVDYRDKMVKIEGAPMRLQLWDTAGQERFRSLTSNFFGRADGFVLCYDISNRPSFDHVIGWMRDIKTRAPPDCDIVLCGNKSDLDADRVVQTEEGKMLAEEYGVQFFESSALTGHNVEGMFTSLATTIKHRRIDEYEAAGGGSVANDASARGGHTVELGGAA--AGETGAPKGALSGCC 236
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BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A1E7F4E5_9STRA (Ras-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4E5_9STRA)

HSP 1 Score: 191 bits (486), Expect = 2.150e-56
Identity = 103/218 (47.25%), Postives = 142/218 (65.14%), Query Frame = 3 
Query:  303 LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVKTR----LEVTQAATDAASTGETLRLNGNRNGAGETDSL----AQKMES-----CC 914
            ++R+LM+GDSS GKTSLVLR+D+  F+ +F TTIGVDY D++++++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YD+SNR SF+ V  WM+DI  +     D+V+CGNK DL   R V  EEG+QLA E GV + ETSA   +NVE+ F  L++ +K +     E       A+  G +    G+ NG G T  +    AQ  E+     CC
Sbjct:   22 IVRLLMVGDSSCGKTSLVLRFDQNVFSTKFVTTIGVDYRDKMVKIEGVPMRLQLWDTAGQERFRSLTSNFFGRADGFVLTYDISNRPSFDHVIGWMRDIKTRAPPDCDIVLCGNKSDLDNDRVVTLEEGKQLAEEYGVEFFETSALTGINVEKMFYGLSTTIKRKRIDEFEAGGNGNSASGGGASTAEQGSVNGGGATQPVNLGAAQATENTPKSGCC 239
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BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A1Z5K1V2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1V2_FISSO)

HSP 1 Score: 189 bits (479), Expect = 1.190e-55
Identity = 104/214 (48.60%), Postives = 140/214 (65.42%), Query Frame = 3 
Query:  303 LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVKTR-----LEVTQA-ATDAAST---GETLRLNGNRNGAGETDSLAQKMESCC 914
            ++R+LM+GDS+ GKTSLVLR+D+  F+ +F TTIGVDY D++++++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YD+SNR SF+ V  WM+DI  +     D+V+CGNKCDL   R V  EEG+QLA E GV + E+SA    NVE  F  LA+ +K +     LE   A +TD AST     T+ L     G       + K   CC
Sbjct:    8 IVRLLMVGDSACGKTSLVLRFDQNVFSTKFVTTIGVDYRDKMVKIEGAPMRLQLWDTAGQERFRSLTSNFFGRADGFVLTYDISNRPSFDHVIGWMRDIKTRAPPDCDIVLCGNKCDLDNDRVVTYEEGKQLADEYGVQFFESSALTGQNVESMFTALATTIKHKRIDDYLEGGGAPSTDGASTTTDNRTIHLAPTEGGG------SSKSPGCC 215
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJP9_ECTSI3.190e-13991.48Rab8D, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YM14_9STRA1.260e-7963.90Rab8D, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A836CM00_9STRA3.310e-7469.09Rab8D, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A6V1KKE1_HETAK2.950e-6353.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2AY15_9STRA2.430e-5958.43Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2SVP5_9STRA1.070e-5756.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4JU42_9STRA4.990e-5753.09Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
A0A6S9AIZ9_9STRA9.840e-5746.64Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1E7F4E5_9STRA2.150e-5647.25Ras-domain-containing protein n=1 Tax=Fragilariops... [more]
A0A1Z5K1V2_FISSO1.190e-5548.60Uncharacterized protein n=1 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5086contigL-elsbetiae_contig5086:362..7816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score402.1
Seed ortholog evalue1.7e-109
Seed eggNOG ortholog2880.D7FJP9
KEGG koko:K07901
KEGG Pathwayko04144,ko04152,ko04530,ko04972,map04144,map04152,map04530,map04972
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0078@1,KOG0078@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04031,ko04131,ko04147
Ec32 ortholog descriptionRab8D, RAB family GTPase
Ec32 orthologEc-06_010670.1
Exons4
Model size949
Cds size669
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5086.13123.1prot_L-elsbetiae_contig5086.13123.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5086 391..7565 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816516.7599955-UTR-L-elsbetiae_contig5086:361..3901622816516.7599955-UTR-L-elsbetiae_contig5086:361..390Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5086 362..390 -
1691683616.5586245-UTR-L-elsbetiae_contig5086:361..3901691683616.5586245-UTR-L-elsbetiae_contig5086:361..390Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5086 362..390 -
1622816516.8274066-UTR-L-elsbetiae_contig5086:7565..78161622816516.8274066-UTR-L-elsbetiae_contig5086:7565..7816Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5086 7566..7816 -
1691683616.6279533-UTR-L-elsbetiae_contig5086:7565..78161691683616.6279533-UTR-L-elsbetiae_contig5086:7565..7816Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5086 7566..7816 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816516.7727025-CDS-L-elsbetiae_contig5086:390..5281622816516.7727025-CDS-L-elsbetiae_contig5086:390..528Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5086 391..528 -
1691683616.5746596-CDS-L-elsbetiae_contig5086:390..5281691683616.5746596-CDS-L-elsbetiae_contig5086:390..528Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5086 391..528 -
1622816516.7835202-CDS-L-elsbetiae_contig5086:2744..29211622816516.7835202-CDS-L-elsbetiae_contig5086:2744..2921Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5086 2745..2921 -
1691683616.5860102-CDS-L-elsbetiae_contig5086:2744..29211691683616.5860102-CDS-L-elsbetiae_contig5086:2744..2921Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5086 2745..2921 -
1622816516.7994545-CDS-L-elsbetiae_contig5086:4411..45551622816516.7994545-CDS-L-elsbetiae_contig5086:4411..4555Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5086 4412..4555 -
1691683616.5995567-CDS-L-elsbetiae_contig5086:4411..45551691683616.5995567-CDS-L-elsbetiae_contig5086:4411..4555Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5086 4412..4555 -
1622816516.8135173-CDS-L-elsbetiae_contig5086:7355..75651622816516.8135173-CDS-L-elsbetiae_contig5086:7355..7565Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5086 7356..7565 -
1691683616.6171234-CDS-L-elsbetiae_contig5086:7355..75651691683616.6171234-CDS-L-elsbetiae_contig5086:7355..7565Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5086 7356..7565 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5086.13123.1

>prot_L-elsbetiae_contig5086.13123.1 ID=prot_L-elsbetiae_contig5086.13123.1|Name=mRNA_L-elsbetiae_contig5086.13123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=223bp
MNGLAPAAAGGAKPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTT
IGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDV
SNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAA
ELGVPYMETSAKDNLNVEETFGDLASRVKTRLEVTQAATDAASTGETLRL
NGNRNGAGETDSLAQKMESCCT*
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mRNA from alignment at L-elsbetiae_contig5086:362..7816-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5086.13123.1 ID=mRNA_L-elsbetiae_contig5086.13123.1|Name=mRNA_L-elsbetiae_contig5086.13123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7455bp|location=Sequence derived from alignment at L-elsbetiae_contig5086:362..7816- (Laminarionema elsbetiae ELsaHSoW15)
TTTTTTCGGGGAGGTCTCCACGCCGCGGACGGATAGGTCTTCACCTTAAC
CGCAGGAGAAGCAGAGAGGGTGTTCATTGAGCTCGTGTGTGTGTGTAAAT
CACGCGGGTCATTGCGACGAGTTTGAGTGCGCGCCACACCGCGTCGTCTG
TTTTCGGCACAGAAGAAGCCAGAAGCCGTGGCCAACACAAAGCTTTCGGA
CTCTTGGCGGCGGGTTTCCCTGCACCGCCGTTTTCATAACCGGGGTTCGT
CATGAATGGTCTCGCACCAGCTGCAGCCGGCGGGGCAAAGCCCACCCCTC
TGCTGATCAGGATACTGATGATTGGGGACAGCTCGGTGGGGAAAACCTCG
CTGGTGCTGCGGTACGACAAGCGTGGGTTTAACCTGCGCTTCACAACGAC
CATCGGGGTCGACTACAGCGACCGCCTCCTGGAGCTCGACGGTCGCCAGG
TCAAGCTGCAGGTGGGGCGAAAGAAGAGGGTTCGCGACTAAAATTGTGCA
CGGCTGCGCTTCTGATAACAGCCCGTGCTAGGAAACAAAGTGATTGCTTA
TGTCGTTGTCGTGTGTGGTGCTGTTGGTGTGGTGTTGGTGTGTGTGGTCT
TATTGCATTTTGATGGTACTTTCTGTACTTTTCTGTACAGCTTCCCAACA
CCCCCGGTCACAGACAGCAGCAGTGGAGAGTACCAAAATGAGTTATTCCC
CTCAAGGTCGACCAGGCCGTTCTACAGGATGGCCTGGGCACAGTTTGTGC
TTGTGGAGATGTTGCAACATTAGCACCTCGCCCCACACACGACAAGCGTA
CAAATTCTACCGAATATCCAACCGGACACACACCCCCACCCACAGCCGCG
ATGTTCGTTTTTTTTCTTGACGAGCACACAACTTACATCTCCTGTATCTC
ATTTTAATGCGTGCAAAGCACCACACGCACGTAGGCGCCCACTCGTACCC
TCAGTGCCCACATGTACAGCAAGCCAGTATCTATCTTTCCGTGACGACCC
GCAGGTGCACGTTTTCCCCACCGAGTACTTCATAACTTCTAGTTATGGCG
GTGTGTATGTAGATGACGTGGAGGAACTGGAGATGACAGGGAGGAGGTTG
GCGGATATGGCCTGTGCGTGTGCTCCAACGCCGCCGTAGCTCCAAGCCCC
CCACCATATTTGAATATTTGAATCGCCTCGGAGAGACGCTCAAAAAGCTG
GCTCAAACAATAAATAATCGTTCGAATTCGTAGCGTTGCAGGACTCTACC
GAAGGATCCTAGATGGAAGATGGAACAATAAAATTTCGCCGTCTCCCCCC
CCCCCCCCCCCCCCCCCCCCCGCACATGATGTGGAATATATTTCCTGCCT
CGGCTTGCGCGTTCCTGCGTCAGCCGTTCATACAGAACCCATACACCTGT
GTATGTTGACGGATGTTGCTGTTGCACGTTTGGTTTGCTGTATTTCTGTT
CCGATGGTGTGGAAGTTGATACTCTGTACCATACGTGCCTAAATATAGAT
AATAAAAAAAAAAAAAAATCGCACATTTCGTAACGCTTCCGCCTGACAAG
ATACCGAACACCCAGGTCGTGGTGGACTAAATGCGATGGAAAATAAATCA
ATTATTTGCCTGCCTTGTAACAAATGTGTAACGTCGGCTCTTGTTGTACA
GACACTTTGTGGACTCCAGTAATTGATTCCGCAAGCGGCGTTCACGAAGC
ATTCGCAAGCAGCGGGGGGTTACACCTGCTGTAATGTAGGGTTGTAAACT
TCACACATTTTATGTACAAGCCTACATAGTGCGATATTTTCCTGCGCTCT
CTTGCTGTCAAGCTCTACGTGCCCTGTATGATCCGTCAGCGGTAATTCTT
TGTTTGCCCTCTCAGCCGGCCACCCGCGGTGTGTCTGGTGCAACGTGCGA
CAAGATGGCCAACGTTTCTGACAGCTTCTTGCTGAGGATAATTAGGGGGT
AATTTACAGGCACAGTTGTTGCAGCCCCCTTAAAAAAAAATTGTCTTCAA
AATGCGAAGCATTCAAGCTCGGCGGGAATTTTGGTTTCGTTTCCCCTCCC
CAATTTATTTTGCTCTGAATCCACGCGGTCGTGTACATCGTAACCGCTGA
TGCTCCTCACACACCCAACCGATTGCAACGAAAGGAGAAGGCGGCCTCAG
TATGTCCATTACCTTCGTCCGCAAGGAATCTTTATTCCGCCATAAGTCTT
AGAAGAGGAGAGCTGCTGAGTGACCGGTGCTCGACAGATACAGCAGTTAC
TGTTTTTATTCGGATCAATTTGCGCGACTTGAGAGGCAATTTCAATTGAG
GTGTGCACCGCTTCTCAGGAGAGCACCAAACTGCTTGAAACTTGACGACC
GTAGAGATATGTGAGCATGGAAGGGACACCGGCCGCCCTGGTTTTGGATC
ACCTCCAGAACGCTCGAACGACTCTGCCTCTCTGATCAAAGAGAAGAGCA
AGAACCCGCTCCCATACCTTCCTCAAAAACTATCGGAAAATTCTCCTCGC
CGCGTCCGAATTGAGCAACTCCGGCTGGCCACACCACTCGCTGTGATTGA
CCAATCGGTCTGCGGTTTTGCCACGCTGTAGTTGATGCATAATATAAGAG
CTCTTCTATGTATTTGTCCTACTTTTGGGTCAATACTACAGCAGGAGCTT
CGGTGAGATAGCTGCGCTCTCCGGTGTGTTGAATCAACTGGGGGAGGGCT
GCGTGGGATCGTATTTTGAGAACAAATAAAAAACTTGTCTTTTTTGTGGG
AGTACAACACGTTTTGGGTTAATTAAAAATGCCCCGAAATCGCCGGAACA
ACATTTATTTGGAGGCTGACACATACACACGTACACCCGTAGTATGTAGT
GCAGTAGTAGCAGAGCTAAAATAGTGACTGGCGAATATTTTTATGTAAAA
GTATGGAACATGGCTATTGTACCGGAAAAAAATCCAGGTTTGTACGCTTA
TTTTTTTCTCCAGGTAAATGATATTTATTTTCTCATGCGCATAGGGCCAG
TGATGCCCCTTTGGTGATTTTCTTGAAACGATTTTCAACCGGCTTTCACT
CCACACGCAGGAGCTTTAGCTGACCCGTATTTATTATTTTGGCTGCCTTC
TCGCCCTTTCCCCCCCGCCCTCCCTACCTCCTTCTGCCGCGCTACCTCTT
CTTTTGGGATGCCGGTGGCATCGCTGTGCTTTGTGTTGATGCTCGGCGGG
CGAAACCGCTTGGGGGTGGGGGTGGGCACTCGATCTCCGACGACTCTGCA
ATCTACCGTAGATCTGGGACACAGCGGGGCAGGAGAGGTTCCACTCGCTG
ACGACGAGCTTTTTTAAACGCGCGGAAGGATTCGTGCTGGTGTACGACGT
TTCAAACCGGCAATCGTTCGAGAGCGTATCGACATGGATGAAGGATATCG
TCGAGGTGGGTTAGTTCAGTTCAGTTTCAGTTCAGTTTCGGTTCAGTTCA
GCTCAATCAGTCATAGCTGCGTGTGCTGCCGCAACCAACTGGGTTCTATT
TACCGGATTCAATGCGACTTGTGTTTTCATTAGTATTGCGCGCACTGCTG
TTGTTTGGTTAGCTCTCGCTGGCGTTGTAGTGTTCGAGTTGGAGGAACGT
ATGTACTCTTTGCACAGCGGAGTGTCTTGCTCTGAGGGAGCGCGATCCAA
AGTTTGTACCATCATGACAGCATGTACTAACTGTGTAGGACCAGGTGGTA
CGCACACTTGCAGTAGTTCCACGGGGTTTTGGCCCACGTGGTTCTACAAG
CCGCCACCACCCCACAGAAATACATTCATCATCCATACCTGCAATCGCCA
GTACCAAGCACTCGAGTACTGTGTAGCAATCCCCAAAACACGCGGGCCAG
GGCTGGTTACACTTTCAACCAAGGGCAGTTTTGAAGCAAATTCGCTCTAC
TCTACGGTAACGGCAGCGTTGCGGCGCAATTGAAGAGAGTGTGACAGTCT
TCCCAGACCCGTGGCGGTTGATATTGGCACCCTCCTTGGGTGTTGTGGAA
TGTAGCAATCACGGGTCCCTTTTGAGTCGGTCCGGGGGGTGCGATGATTT
TCGCCACCACACCAAGCAGCAGTTACTTTATTTCAATGTGATAAATTTAC
ACCCACATGGTCTGCTAGGCAACAGTTTTTCGCCAACCAATTAAACCTGA
GGTCCAGCGGTATACGTAGTGCTTTTATTTTGTACAACCAGCCGATCGCC
TGAGATTTTTATGTTAAATATTTGAACGTACCCCCCCCCTCCTCCCTCCT
CCAAGAACATGAACCCCAGAAGTACCCCGGGTGATGATGTACAGTCAAAA
TCCCCAGAAGCTTTTGGCCGCAGGCAGCCATACCCTTCACCGATGTGGCT
CACTGCAATATAGCCCGCATAACACCGTCCTTGCCTGATGGTGCCCTGGT
TTCGTTGTTTTGGGGACGAAAAAAAAGTTGCCAGCGGGGATGATATTCAG
GGGAGTCGATGTGAGAGCTCGGCTCCCCCCTTCCAAATGAGTTGTGTACA
TATGGTATGCATGTTTAGTTCGTTCGTGGCTTGTTGTTGTTGTTGTTGCT
GTGTTGATATTAAAAACCGTTCCGGTCTATCTCTCTATCCAGCACCTCCA
TATGTCCGTACAACTCTTGTCTTGCGTGAAAAAAAAACAAGTCTAGGCTG
CGTTCACGGCGTGGCAGGCGGCTTCGGGCTGCTGCTGCTGCTGTCCCCCA
TAAATACATGTGTGGATTAACACGGACAGACGGAGGTGCTGGGTATAAAG
AGATCGGAGCGTTTTTTTTTTGTGTGAAGACAACAACAACAACTGCTGCT
ACATACGTTGACGGTCTGTCTTACTTTGTTCGTGTGGTTCTGTCTGCCTC
TCTTTCCGTTGTGTCGGTGTCTGGTTACGGTTCGGAATTTTTCAGCAAGG
GAAGCGGGGTTCGGACGTGGTTATTTGTGGCAACAAGTGTGACCTCCAAG
GGAGAGAAGTCGCGCGGGAGGAGGGAGAGCAGCTGGCGGCGGAGCTGGGG
GTCCCGTACATGGAGACCAGTGCTAAGGATAACCTCAACGTAGAGGAGAC
CTTCGGCGACTTGGCTTCGCGGGTAAGAGACTGACTGGCTGACTGACTGG
CTGACTGACTGATGCTGTTTTACCAACTCAAGATCTATGATTTTCCTGCT
ATTTTTGCGGGCCGCACGAGTGGACAGAGTTGAAAGGGGATAGGTTGCGG
TGTTGCTGAATTGATTAGGACGACGAAGGAGATTCTAACAACCGGCGGAA
GTTTATCAAAACGTGTATAAAACACCAGTGGCCCCGTCTGGCGCTATGAT
CAGCAGGCCTGAAAATAAAGTCGGCCAGCCAACGATGTCCTTGTACGACC
ACGCCCGTGCGGTGCTTGCGCTCTCCCGTCCATGACATGATTTTATCGGT
GGTTTGATCGGTGGTGTAACGCGCCGCGTAGTTGTGTGCGTGGAGTGCCA
ACCAAAGGTGGTGATGGGCAGAAGTCGAAATACGTGTCTTTGTGTAAATG
CTGCTGTACCCACATGTTGGGGCAAATCTGCTTTGCATTGTTCTTGCTGT
ATGCGCCGGCAGCGACTGGGGGCGGTCGTGCTGTTGCAACCTCGTTTTTG
GGTTGATCGAAACGCTGCTCCCGGTTGTGATTGTGATGTCAGGCCATTTA
ACCGTGGGCTGCATCGACTCATGTACCTGGAAGTATGTAGTAATGTAATT
AGCTGCTCAATGAAGTGGCCCAAACCTGCAGCTATTATTAAGCTGCCGCG
GCCAAGGTTGCGGGGTACGTCTATCTAGAACCCGTCCGTCCTATCGTCAC
GCTTCCAGCCGCCTATTAGAAAGCAAAAACGAGAACACTTAAAACATGGT
GTTTTACACACGTTCGTTCGGTCTCTGCGAAGTGCCCGGGGAGGCATTTC
CTATCTACCCCCCCCACACATACACCCTCCACACACGCTAGATACACGGG
GGCCCGAGTCACGGCCTTTCGGGTAACATTGTTTACTTGGAGTTCGGATT
TTCCGACATTTTTGTTTTGCTCCTTTCGGGTAACATTATTTCCTTGGAGT
GCCGGGTTGGTGATGCGGAAATAACGCGATTGTAGCTGCTGTACTGCCCG
AGCGTGCCGAAAAAAAGAATGGCGCGAATCGGTGCTCCAGTCGCGGAGTA
CGGATAGATTTACACGAATCGCAAGTCCACCGGGCGCCCGCAGTAAAGAA
ACACGTGCATTAAAGACCTTCCCACCAAAAGCCCCCACACTCTCAGGCAT
GCACTGGCACCACTACGCCAACCCTATACTAGGAGCCCGCATGGTCCATC
CTGGAGGATTTGTAGGACAGCATATATGTACAACGGATTGCTCTAGTGTT
GGTGCAGGTTTTAGACCCTGGATCCCTCTGTGGGTGTCGAATCAGAGCTG
CCTCCCGACACACTTTGCTTCGCTCGGCCAGGCCAGCAGCAGCAAACGGT
AGTAGCGGGAGTTAGTGCTGTGCGCGAATGCTGGTGGCGTGAAGAGGTGC
TCTGCATACCTTAGAATCTACTCTTCCCCATATGTGTAGTCTCCTGAGGG
ATCAAGAAACTCTGTTCTCGTAAGAAGTCGTGCTGTAATCTGCTGCAATG
TGTCTTTCAGCTGGCTCCCTTCCTCGGCTCTCTCTCTCTCTCTTCCCTAC
CCAAATTGTGCGATGTGAAGAGTTGATGCTGTGCGCAAACTATTTATATA
TATTTTTGCGCAAACTATTACCTTTTTTTTACCAACTCGCTCAGTAGTCA
CACATCTGTAGTACATATTCTCAACGTGGCTTGAGGGAGAAGTTCCTGGA
AGCTAAGATATCTGCTTCTCCGAGTCGGGGTATACCCAAGTCCTGTGTTT
TTGACGCCCCACGATGTCCCTCCCTCAAAATTCACCGGCATGCGTGCCTC
CTTAAAGTCAGGAGTCAAATATCACCGGTATTGTCAATTTTGCCCCCTTA
AACGGACGTTTTTTCATTCGGTCAGCCAACAGCAAGCGTGGTCGATGTTA
CACTTGCCTTAAAGCACACACACTTGTGGACTTCGGCCGACGGTAGCCAC
GGAGAAGAAAGGGGTAAAACTCTTAAGAGTCATCTTCAGGAACGTTCCAT
AGAACGGGTATCCTGCAAGGTATGTATCTACACTCTGTGTGTTAAATTAC
AGACGGGACCCCTCTGAATCTCCGAGTTGTCCATAAAACGCGAACACACG
CATGCACACACACGCACACACATTGCCACCGTGGGCCGACCAAAGTGCAC
ACCGGCCGAACGTGCGGCATCTCGTGTTAATCCTCCAGGTTAAGACCCGG
CTGGAGGTGACCCAGGCCGCAACCGACGCAGCAAGCACGGGCGAGACACT
GAGGCTTAACGGAAATCGAAACGGAGCTGGAGAAACCGACTCCCTGGCCC
AAAAGATGGAGTCATGTTGCACGTAAAGTTGGCCCTTTAAGGCCTGCTGG
GTGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5086:362..7816-

>mRNA_L-elsbetiae_contig5086.13123.1 ID=mRNA_L-elsbetiae_contig5086.13123.1|Name=mRNA_L-elsbetiae_contig5086.13123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1338bp|location=Sequence derived from alignment at L-elsbetiae_contig5086:362..7816- (Laminarionema elsbetiae ELsaHSoW15)
ATGAATGGTCTCGCACCAGCTGCAGCCGGCGGGGCAAAGCCCACCCCTCT
GCTGATCAGGATACTGATGATTGGGGACAGCTCGGTGGGGAAAACCTCGC
TGGTGCTGCGGTACGACAAGCGTGGGTTTAACCTGCGCTTCACAACGACC
ATCGGGGTCGACTACAGCGACCGCCTCCTGGAGCTCGACGGTCGCCAGGT
CAAGCTGCAGATGAATGGTCTCGCACCAGCTGCAGCCGGCGGGGCAAAGC
CCACCCCTCTGCTGATCAGGATACTGATGATTGGGGACAGCTCGGTGGGG
AAAACCTCGCTGGTGCTGCGGTACGACAAGCGTGGGTTTAACCTGCGCTT
CACAACGACCATCGGGGTCGACTACAGCGACCGCCTCCTGGAGCTCGACG
GTCGCCAGGTCAAGCTGCAGATCTGGGACACAGCGGGGCAGGAGAGGTTC
CACTCGCTGACGACGAGCTTTTTTAAACGCGCGGAAGGATTCGTGCTGGT
GTACGACGTTTCAAACCGGCAATCGTTCGAGAGCGTATCGACATGGATGA
AGGATATCGTCGAGATCTGGGACACAGCGGGGCAGGAGAGGTTCCACTCG
CTGACGACGAGCTTTTTTAAACGCGCGGAAGGATTCGTGCTGGTGTACGA
CGTTTCAAACCGGCAATCGTTCGAGAGCGTATCGACATGGATGAAGGATA
TCGTCGAGCAAGGGAAGCGGGGTTCGGACGTGGTTATTTGTGGCAACAAG
TGTGACCTCCAAGGGAGAGAAGTCGCGCGGGAGGAGGGAGAGCAGCTGGC
GGCGGAGCTGGGGGTCCCGTACATGGAGACCAGTGCTAAGGATAACCTCA
ACGTAGAGGAGACCTTCGGCGACTTGGCTTCGCGGCAAGGGAAGCGGGGT
TCGGACGTGGTTATTTGTGGCAACAAGTGTGACCTCCAAGGGAGAGAAGT
CGCGCGGGAGGAGGGAGAGCAGCTGGCGGCGGAGCTGGGGGTCCCGTACA
TGGAGACCAGTGCTAAGGATAACCTCAACGTAGAGGAGACCTTCGGCGAC
TTGGCTTCGCGGGTTAAGACCCGGCTGGAGGTGACCCAGGCCGCAACCGA
CGCAGCAAGCACGGGCGAGACACTGAGGCTTAACGGAAATCGAAACGGAG
CTGGAGAAACCGACTCCCTGGCCCAAAAGATGGAGTCATGTTGCACGTAA
GTTAAGACCCGGCTGGAGGTGACCCAGGCCGCAACCGACGCAGCAAGCAC
GGGCGAGACACTGAGGCTTAACGGAAATCGAAACGGAGCTGGAGAAACCG
ACTCCCTGGCCCAAAAGATGGAGTCATGTTGCACGTAA
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