mRNA_L-elsbetiae_contig5083.13120.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5083.13120.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 661 bits (1706), Expect = 3.580e-219 Identity = 469/873 (53.72%), Postives = 549/873 (62.89%), Query Frame = 1 Query: 55 CCSASCGGCGGTGCGRRAGG--NVNCCTSTINESGSMCSVTGKAPCIMDEEPT-TPATTPXXXTPTNTDDFCTNGLPGFESGGVCCSASCGGCGGAGCGQRAGGNVN-CCTSTINESGRMCSDAGKAPCIVDEEPTTPATTPTSPTPTNTDDFCTNGLP--GFAAGGVCCSASCGGXXXXXCGQRAGG--NVNCCTGMIKESGRMCSDTGKAPCIMAEE--PTTXXXXXXXXXXXXTDDLCTNGLPGFESGGVCCSASCGGCGGAGCGRRTGG--NVNCCTSTINNGGRMCSVTGKAPCIVDEESTPATTPTSPTPTSTNDFCSNGLP--GFEAGGTCCSASCGACGGPGCGNLAGG--SDECCTGDILTSGVKCSVSKSAPCVND-NSGGPTPTSPAXXXXXXXXXPVPSGCSRKATIKFTSKAIELSGGGCATLTDIYNAQLGNGPLYVLDKAD---SSSGGNRSPTGYWFLKDNLFIFDDVTLFVESKARGGDCDVLRIESTSSKHWEIKAHGGNLYFEGTKVTSWNN--GKERT-YTGSKSNKRSFIRCITEYDDSDKYSCDGHSSKNMGTCRMDIIDSTMGNLGYFGAESYGLTWKVRGLCTKSGKLENLDIFEDRNVYGDIKGSDIYGMYYGMYSYGHQGGVWTNNLMHDNVEYGFDPHDDSDFLTIAGNTVYNNGNHGIIASKRCNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAFFETYDSEIYKNKVERCLFGIRLSLGSGDNKIYNNTFDDLERYGLYTYKGSDKSEDSRSKSNKGRPFNNRFEDNTIKNVKVGVQVKESDDIVFKANTFTNVEEFEFPESKDTVWSGNTIGRACVEDRADFASGSIPEC 2604 CCSA C CGG+GC R G +CCTS I +G C G APC+++E + TPA++ G G G VCCSA CG CGG+GCG RAG N CCTSTI + C G APC+VD + TSPT + G G CCSA C C R GG +CCT I +CS TG APCI+ + PT XXXXXXXXXXXX+ +G+ G CCSA C CGG+GC R GG +CCTS I+N +CSVTG APCIVD + TSPT S G G CCSA CG CGG G +CCT DI CSV+ +APC+ D +S GPTPT XXXXXXXXX A+I +S + SGGGCATLTD+YN Q G+GPLYVLD ++ S GG+ SPTGYW L +L I D VTL+V + GGD DVLRI+ST WEI+ GG+L F T VTSW+ G+ERT Y G RSFI C+T++DDSD +SC G S+K G CRMDIIDSTMGN+G+F AESYGLTWKVRGLC+ L N++I +D NVYGDIKGS+IYGMYYGMYSYGHQGGVWT+N+M DN+ YGFDPHDDSD LTIAGNTVY NGNHGIIASKRCNNV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A E++ +EIY N +E C +GIRLSLGS DN I++NTFD YGLYTYKGSD D N GR +N F+ NTI N V +++KE DD F N F NV+ FEF +S DTVW+ N IG C+++ DFASGSIP C Sbjct: 30 CCSAGCEECGGSGCSDRGDGLTGADCCTSDILAAGKAC---GSAPCLLEEGSSPTPASS--------------GGCDGILQGDVCCSAECGTCGGSGCGSRAGLTANECCTSTIAAANVPC---GSAPCVVDGD--------TSPTXXXXXXXXSGSFTCDGVLKGDYCCSAGCVECGGSGCSDRGGGLTGADCCTSDISN---LCSVTGAAPCIVDGDTSPTXXXXXXXXXXXXXSGSFTCDGV---LKGDYCCSAGCVECGGSGCSDRGGGLTGADCCTSDISN---LCSVTGAAPCIVDGD-------TSPTXXXXXXXXSGSFTCDGVLKGDYCCSAGCGECGGXXXXXXXXGLTGADCCTSDISN---LCSVTGAAPCIVDGDSTGPTPTPXXXXXXXXXXXXXXXXXGTIASISTSSDSSSFSGGGCATLTDMYNTQSGSGPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQSTDDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGG----RSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSD---LSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSD---DPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNNDIGGGCLDESTDFASGSIPSC 845
BLAST of mRNA_L-elsbetiae_contig5083.13120.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI) HSP 1 Score: 580 bits (1495), Expect = 4.350e-190 Identity = 374/671 (55.74%), Postives = 435/671 (64.83%), Query Frame = 1 Query: 745 CTNGLPGFESGGVCCSASCGGCGGAGCGRRTGGNV--NCCTSTINNGGRMCSVTGKAPCIVDEESTPA-TTPTS-------------PTPTS-----------TNDFCSNGLPGFEAGGTCCS--ASCGACGGPGCGNLAGGSD-ECCTGDILTSGVKCSVSKSAPC-VNDNSGGPTPTSPAXXXXXXXXX-------------PVPSGCSRKATIKFTSKAIELSGGGCATLTDIYNAQLGNGPLYVLDKADSS---SGGNRSPTGYWFLKDNLFIFDDVTLFVESKARGGDCDVLRIESTSSKHWEIKAHGGNLYFEGTKVTSWNN--GKERTYTGSKSNKRSFIRCITEYDDSDKYSCDGHSSKNMGTCRMDIIDSTMGNLGYFGAESYGLTWKVRGLCTKSGKLENLDIFEDRNVYGDIKGSDIYGMYYGMYSYGHQGGVWTNNLMHDNVEYGFDPHDDSDFLTIAGNTVYNNGNHGIIASKRCNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAFFETYDSEIYKNKVERCLFGIRLSLGSGDNKIYNNTFDDLERYGLYTYKGSDKSEDSRSKSNKGRPFNNRFEDNTIKNVKVGVQVKESDDIVFKANTFTNVEEFEFPESKDTVWSGNTIGRACVEDRADFASGS--IPEC 2604 C+NG PG E G CC + CG CGG+GC R G +CCT I G CS TG APC +D +STP+ +TPT P P T + C+N G+ G A CG CGG GC G +D +CC G I SG CSV+ APC V+ +S P TSP XX PVPSGC KAT++ GGCATLTD+YNAQ G GPL+VLD D+ +GG+ PTG W L N+ I DD TLFVE K RGGDCDVLRIEST SK+WEI HGGN+YFEGTKVTSW+ GKER Y K+ RSFIRCIT+YDD+ YSC G S+K+MGTCRMDIIDSTMGN+GY +ESYGLTWKVRGLC L NL +F+ RNVYGDIK SDIYGMYYGMYSYGH+GGVWTNN MHDNV+YGFDPHDDSD L IA N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AF E++D++IY N++ C +GIRLSLGSGDN I NNTFD++ +YGLYTYKGSD + S GRP N+FE NT+ N K+GV KE DD +FK N FTNV+ FEF +SKDT W+GN++G C++ DF GS IP+C Sbjct: 21 CSNGFPGIEKSGACCVSDCGTCGGSGCSSRESGLTGDDCCTKNILKQGAPCSATGHAPCFLDGDSTPSKSTPTESDGFVYEGCFNDKPEPDRLFSYVTTMDDMTTELCANECKGYAFFGLQWGREAGCGTCGGTGCSQRPGLTDSDCCIGKIEESGPLCSVTGKAPCFVDGDSSAPEQTSPVPSPTPKTXXXXXXRSATPTPPTPVPSGCDTKATVQIDKDTAYFKSGGCATLTDLYNAQDGTGPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSKYWEIFGHGGNMYFEGTKVTSWDTSKGKEREY--KKNEGRSFIRCITQYDDN--YSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKN---LSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLVIAHNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLESFDADIYDNRIVNCKYGIRLSLGSGDNDITNNTFDNISKYGLYTYKGSDSPDVSN-----GRPKGNKFEGNTVSNTKIGVLGKEGDDNIFKNNVFTNVDTFEFEKSKDTEWTGNSLGGGCLDRGKDFTKGSDTIPDC 679
BLAST of mRNA_L-elsbetiae_contig5083.13120.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 439 bits (1129), Expect = 9.440e-137 Identity = 239/472 (50.64%), Postives = 289/472 (61.23%), Query Frame = 1 Query: 1225 PVPSG---CSRKATIKFTSKAIELSGGGCATLTDIYNAQLGNGPLYVLDKADSSSGGNRSPTGYWFLKDNLFIFDDVTLFVESKARGGDCDVLRIESTSSKHWEIKAHGGNLYFEGTKVTSWN--NGKERTYTGSKSNKRSFIRCITEYDDSDKYSCDGHSSKNMGTCRMDIIDSTMGNLGYFGAESYGLTWKVRGLCT---KSGKLENLDIFEDRNVYGDIKGSDIYGMYYGMYSYGHQGGVWTNNLMHDNVEYGFDPHDDSDFLTIAGNTVYNNGNHGIIASKRCNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--IAFFETYDSEIYKNKVERCLFGIRLSLGSGDNKIYNNTFDDLERYGLYTYKGSDKSEDSRSKSNKGRPFNNRFEDNTIKNV--KVGVQVKESDDIVFKANTFTNVEEFEFPESKDTVWSGNTIGRACVEDRADFASGSIPEC 2604 P PS C AT++FT GGGC TLT +Y AQ G+GPLYVLD+ + GG +PTGYW L NL + D TL V A GD DVLR+ STS E++ +GGNL+F+ T VTSW+ NG+ER + G RSFI C+T++DDS + CDG S++ G CRMDII STMGN+G+F AESYGLTWKVRG C +G N +IFED NVYGDI S+IYGMYYG YSYGHQGGVW +N+M DN++YGFDPHDDSD LTI+ N VY NGNHGIIASKRCNNV +A E+YD+ IY N C +GIRLSLGSG N I NN F + +YGLYTY GSD D ++ GRP +N F+ NTI+ +GV +KE D VF N FT V +EF +S DT W NT G C++ DFA G I EC Sbjct: 170 PTPSATTSCDSAATVRFTDDIAYFEGGGCGTLTQMYEAQEGDGPLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLSTSDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGD---GRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSD---DPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT-GGGCLDGSTDFAEGGITEC 632
BLAST of mRNA_L-elsbetiae_contig5083.13120.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 429 bits (1102), Expect = 3.330e-130 Identity = 323/831 (38.87%), Postives = 411/831 (49.46%), Query Frame = 1 Query: 259 CTNGLPGFESGGVCCSASCGGCGGAGCGQRAG-GNVNCCTSTINESGRMCSDAGKAPCIVDEEPTTPATTPTSPTPTNTDDFCTNGLPGFAAGGVCCSASCGGXXXXXCGQRAG-GNVNCCTGMIKESGRMCSDTGKAPCIMAEEPT-----------TXXXXXXXXXXXXTDDLCTNGLPGFESGGVCCSASCGGCGGAGCGRRTGGNVNCCTSTINNGGRMCSVTGKAPCIVD------------------------------------EESTPATTPTSPTPTSTNDFCSNGLPGFEAGGTCCSASCGACGGPGCGNLAGGSDECCTGDILTSGVKCSVSKSAPCVNDNSGGPTPTSPAXXXXXXXXXPVPSGCSRKATIKFTSKAIE----------LSGGGCATLTDIYNAQLGN---GPLYVLDKADSSSGGNRSPTGYWFLKDNLFIFDDVTLFVESKARGGDCDVLRIESTSSK-HWEIKAHGGNLYFEGTKVTSWNNGKERTYTGSKSNKRSFIRCITEYDDSDKYSCDGHSSKNMGTCRMDIIDSTMGNLGYFGAESYGLTWKVRGLCTKSGKLENLDIFEDRNVYGDIKGSDIYGMYYGMYSYGHQGGVWTNNLMHDNVEYGFDPHDDSDFLTIAGNTVYNNGNHGIIASKRCNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--IAFFETYDSEIYKNKVERCLFGIRLSLGSGDNKIYNNTFDDLERYGLYTYKGSDKSEDSRSKSNKGRPFNNRFEDNTIKNVKVGVQVKESDDIVFKANTF---TNVEEFEFPESKDTVWSGNTI 2547 C+NGL G E GGVCC CG CGG GCG R G +CCTSTI E +CS +APC++DEE T D C+NG+ A G +CCSA CG C R G CCT I + + C D APC+M+ XXXXXXXXXXXX G G CC+A CG CGG GCG R G CCTS +CSVTG +PC++D T TT T+ + TS D + G G CC+A CG CGG XXXXXXXXX + GGGCATLTDIY AQ G+ GPL+VLD D+ GG SPTGYW L ++ + + L V GGD VLRI+ST S+ ++EI+ HGG+L F TKVTSW+ +++ T K +RSFIRC++E +CDGH+ +MG CRMDII S MG +GY AESYG++WKVRG C++ N ++FE V GDI SDIYGMYYG YS+GH GG+WT N MHDN +YGFDPHDDSD L IA NTV+ NGNHGIIASKRCNNV +A E+ + I+ N +GIRLS+G+ N + NN+F + ++YG+YTY+G+DK E SK G +N F NT++ GV++++++ IVF N F ++ EE+ F + +D VW+ N + Sbjct: 24 CSNGLSGLEKGGVCCPVECGTCGGTGCGSRPGLTKYDCCTSTIKEDNHLCSVTKEAPCVIDEE-------------TEADPTCSNGV---AKGDICCSAGCGYCGGTGCAGRGGLSGDECCTSKIAAANKSCDDQS-APCVMSGNSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSCGGVAKGAYCCNAGCGTCGGTGCGMRGDG---CCTSDA--ALSLCSVTGMSPCLMDCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTTTTTDTT-SGTSVADATATSCDGVSKGAYCCNAGCGTCGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKK-ERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSED---PNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPE--ASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRV 820
BLAST of mRNA_L-elsbetiae_contig5083.13120.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 381 bits (978), Expect = 5.050e-112 Identity = 213/454 (46.92%), Postives = 273/454 (60.13%), Query Frame = 1 Query: 1291 GGGCATLTDIYNAQ------LGNGPLYVLDKADSSSGGNRSPTGYWFLKDNLFIFDDVTLFVESKARGGDCDVLRIESTSSKHW-EIKAHGGNLYFEGTKVTSW---NNGKERTYTGSKSNKRSFIRCITEYDDSDKYSCDGHSSKNMGTCRMDIIDSTMGNLGYFGAESYGLTWKVRGLCTKSGKLENLDIFEDRNVYGDIKGSDIYGMYYGMYSYGHQGGVWTNNLMHDNVEYGFDPHDDSDFLTIAGNTVYNNGNHGIIASKRCNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--IAFFETYDSEIYKNKVERCLFGIRLSLGSGDNKIYNNTFDDLERYGLYTYKGSDKSEDSRSKSNKGRPFNNRFEDNTIKNVKVGVQVKESDDIVFKANTFTNVEEFEFPESKDTVWSGNTIGRACVE--DRADFASGS--IPEC 2604 G GC T+TD+YN + GP+Y+LD + T W L L+I + + + GGDC+ LRI+ST S + E++ HGG+LYFE T VTSW N + TY N RSF+ C++E D C+G++ MG CRMDII+S + LGYF +ESYG+TWKVRG C L N ++FE NVYGD+ GSDI+ +YYG YSYGHQGGVWTNN MHDN +YGFDPHDDSD+LTIA N VYNN NHGIIASKRCNNV IA E++D++IY N + +GIR+SLGSG+N++Y N+F D+ +YGLYTY+GSD+ + S GRP N N +++ +GV++KE DD F NTF NV+ FEFPES +T+WSGN IG C+E D D ASGS IP C Sbjct: 446 GEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYE----NGRSFLNCVSEKLTGDD--CEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKD---LSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-----DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDGCIEEDDEFDAASGSDSIPIC 885
BLAST of mRNA_L-elsbetiae_contig5083.13120.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 362 bits (930), Expect = 2.120e-110 Identity = 210/442 (47.51%), Postives = 265/442 (59.95%), Query Frame = 1 Query: 1282 ELSGGGCATLTDIY------NAQLGNGPLYVLDKADSSSGGNRSPTGYWFLKDNLFIFDDVTLFVESKARGGDCDVLRIESTS-SKHWEIKAHGGNLYFEGTKVTSWN-NGK--ERTYTGSKSNKRSFIRCITEYDDSDKYSCDGHSSKNMGTCRMDIIDSTMGNLGYFGAESYGLTWKVRGLCTKSGKLENLDIFEDRNVYGDIKGSDIYGMYYGMYSYGHQGGVWTNNLMHDNVEYGFDPHDDSDFLTIAGNTVYNNGNHGIIASKRCNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--IAFFETYDSEIYKNKVERCLFGIRLSLGSGDNKIYNNTFDDLERYGLYTYKGSDKSEDSRSKSNKGRPFNNRFEDNTIKNVKVGVQVKESDDIVFKANTFTNVEEFEFPESKDTVWSGNTIG-RACVED 2568 E GGGC TL+D+Y N GP++VLD D + TG W L +LF+ TL+ K GG+C LRI STS S +EI+ HGGNLYFE T VTSW+ +G+ + TY RSFIRC++E + D + NMG CRMDIIDS MG LGY +E+YG+TWKVRG C+ L N D+F+D NVYGD+KGSDI+ MYYGMYS+GHQGGVWTNNLMHDN +YGFDPHDDSD+L IAGN VYNN NHGIIASKRCNNV IA ET +I+ N+V+ FGIR+ LGS +NK+++N F ++ G++TY GSD+ GRP +N F +NTI+ + GV++KESD+I N F+ E EF + D VWSGN+I C+ED Sbjct: 5 EGDGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDG----RSFIRCVSEVLTGE----DTCAINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSD---LSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDE-----PWVGGGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLED 430
BLAST of mRNA_L-elsbetiae_contig5083.13120.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 351 bits (901), Expect = 3.230e-105 Identity = 215/542 (39.67%), Postives = 284/542 (52.40%), Query Frame = 1 Query: 985 CSNGLPGFEAGGTCCSASCGACGGPGCGNLAGG--SDECCTGDILTSGVKCSVSKSAPCVNDNSGGPTPTSPAXXXXXXXXXPVPSGCSRKATIKFTSKAIELSGGGCATLTDIYNAQL-----GNGPLYVLDKADSSSGGNRSPTGYWFLKDNLFIFDDVTLFVESKARGGDCDVLRIESTSSKHW-EIKAHGGNLYFEGTKVTSW---NNGKERTYTGSKSNKRSFIRCITEYDDSDKYSCDGHSSKNMGTCRMDIIDSTMGNLGYFGAESYGLTWKVRGLCTKSGKLENLDIFEDRNVYGDIKGSDIYGMYYGMYSYGHQGGVWTNNLMHDNVEYGFDPHDDSDFLTIAGNTVYNNGNHGIIASKRCNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--IAFFETYDSEIYKNKVERCLFGIRLSLGSGDNKIYNNTFDDLERYGLYTYKGSDKSEDSRSKSNKGRPFNNRFEDNTIKNVKVGVQVKESDDIVFKANTFTNVEEFEFPESKDTVWSGNTIGRA-CVED 2568 CSNG G ++ CC CG CGG C G + +CC I +G CS + SAPC+ D+ G TP + G GC T+TD+YN +L GP++ LD + ++ + + W L L I + + GGDCD LRI+ST + E++AHGG++YFE T VTSW N + TY G RSF+ C++E + C G + MG CRMDII+S +G LGYF +ESYGLTWKVRG C L N D+F+ NVYG++ GSDI+ YYG YSYGHQGGVW NN MHDN +YGFDPHDDSD+LT IIASKRCNNV +A E+ +++IY N+ FGIRLSLGS +N ++ N F+D+ GLYTY+GSD+ D S GRP +N FE+N I NV GV++KE DD V N FT E EF ++++T W GNT+ + C+++ Sbjct: 12 CSNGFVGVQSENICCHVDCGTCGGSECRRRGKGLGAADCCRNYISKNGALCSENLSAPCIMDDVTGNTP--------------------------------DAEGEGCFTITDLYNFRLESDGSAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGG----RSFLNCVSEKLTGEV--CVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKD---LSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSD---GRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCIKN 497
BLAST of mRNA_L-elsbetiae_contig5083.13120.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI) HSP 1 Score: 360 bits (923), Expect = 4.650e-104 Identity = 323/974 (33.16%), Postives = 423/974 (43.43%), Query Frame = 1 Query: 91 GCGRRAG-GNVNCCTSTINESGSMCSVTGKAPCIMDEEPTTPATTPXXXTPTNTDDFCTNGLPGFESGGVCCSASCGGCGGAGCGQRAG-GNVNCCTSTINESGRMCSDAGKAPCIV----DEEPTTPATTPTSPTPTNTDDFC-------TNGLPGFAAGGVCCSASCGGXXXXXCGQRAGGNV--NCCTGMIKESGRMCSDTGKAPCIM----------------------------------------AEEPTTXXXXXXXXXXXXT-DDLCTNGLPGFESGGVCCSASCGGCGGAGCGRRTGGNVNCCTSTINNGGRMCSVTGKAPCIVDEESTPATTPTSPTPTSTNDFC----------SNGLPGFEAGGTCCSASCGACGGPGCGNLAGGSDECCTGDILTS------------------------------------------GVKCS-VSKSAPCVNDNSGGPTPTSPAXXXXXXXXXPVPSGCS--RKATIKFTSKA-IELS-----------GGGCATLTDIYNAQLGN---GPLYVLDKADSSSGGNRSPTGYWFLKDNLFIFDDVTLFVESKARGGDCDVLRIESTSSK-HWEIKAHGGNLYFEGTKVTSWNNGKERTYTGSKSNKRSFIRCITEYDDSDKYSCDGHSSKNMGTCRMDIIDSTMGNLGYFGAESYGLTWKVRGLCTKSGKLENLDIFEDRNVYGDIKGSDIYGMYYGMYSYGHQGGVWTNNLMHDNVEYGFDPHDDSDFLTIAGNTVYNNGNHGIIASKRCNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--IAFFETYDSEIYKNKVERCLFGIRLSLGSGDNKIYNNTFDDLERYGLYTYKGSDKSEDSRSKSNKGRPFNNRFEDNTIKNVKVGVQVKESDDIVFKANTF---TNVEEFEFPESKDTVWSGNTIGRA-CV--EDRADFASG--SIPE 2601 GCG R G +CCTSTI +CSVT +APC++DEE T D C+NG+ G +CCSA CG CGG+GC R G CCTSTI + + C D APC++ D T TT G A G CC+A CG CG CCT ES +CS TGK+PC+M A TT + D G G CC+A CG CGG CCTS +CSVTGK+PC++D + PATT T T + G +G CC+A CG CGG D CC D S C V+K A C N + T T+ XXXXXXXX C+ K+T+ K ++ S GGGCATLTDIY AQ G+ GPL+VLD D+ GG SPTGYW L ++ + +D L V GGD VLRI+ST+S ++EI+ HGG+L F TKVTSW+ ++ T + +RSF+RC++E + +CDGH+ +MG CRM V GDI S+IYGMYYG YS+GH GG+WT N MHDN +YGFDPHDDSD L IA NTV+ NGNHGIIASKRCNNV +A E+ + IY N +GIRLS+G+ N + NN F + ++YG+YTY+G+D+ E SK G +N F NT++ GV++++++ I F N F ++ EE+ F + +D VW+ N + C+ +D D+ S+P+ Sbjct: 16 GCGSRPGLTKYDCCTSTIKADNHLCSVTQEAPCVIDEE-------------TEADPTCSNGV---AKGDICCSAGCGYCGGSGCSGRGGLSGDECCTSTIAAANKSCDDQS-APCVMSGGSDLGDTAGQTTXXXXXXXXXXXXXXXXXXSTATSCGGVAKGAFCCNAGCG-----TCGGTXXXXXXEGCCTSDAAES--LCSATGKSPCLMDCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASTATTITDTTTDTTSGISVADATATSCDGVSKGAYCCNAGCGTCGGX---XXXXXGEGCCTSDA--ALSLCSVTGKSPCLMDS-AIPATTTDIIDNTDTTXXXXXXXXXVASTATSCGGVASGYYCCNAGCGTCGGT---XXXXXXDGCCASDAALSLCSATGMSPCLMETSSTXXXXXXXXXXXXXXXXXXXGSVAXXXTSCGGVAKGAYCCNAGASTTTTTTVDGXXXXXXXXXXXXTCTDYSKSTVTIEIKNNVQTSSKKNGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTASNDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNY-NKERSFVRCVSEELADNPDTCDGHAVNHMGECRM--------------------------------------------VRGDIIDSNIYGMYYGHYSFGHDGGIWTGNQMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGASRNVVENNKFSECDQYGIYTYQGNDEPE--ASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNLVPDGICLKGDDNTDYFKSYDSLPD 904
BLAST of mRNA_L-elsbetiae_contig5083.13120.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 330 bits (846), Expect = 3.870e-98 Identity = 192/456 (42.11%), Postives = 251/456 (55.04%), Query Frame = 1 Query: 1297 GCATLTDIYNAQ------LGNGPLYVLDKADSSSGGNRSPTGYWFLKDNLFIFDDVTLFVESKARGGDCDVLRIESTSSKHW-EIKAHGGNLYFEGTKVTSW---NNGKERTYTGSKSNKRSFIRCITEYDDSDKYSCDGHSSKNMGTCRMDIIDSTMGNLGYFGAESYGLTWKVR---------GLCTKSGKLENLDIFEDRNVYGDIKGSDIYGMYYGMYSYGHQGGVWTNNLMHDNVEYGFDPHDDSDFLTIAGNTVYNNGNHGIIASKRCNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--IAFFETYDSEIYKNKVERCLFGIRLSLGSGDNKIYNNTFDDLERYGLYTYKGSDKSEDSRSKSNKGRPFNNRFEDNTIKNVKVGVQVKESDDIVFKANTFTNVEEFEFPESKDTVWSGNTI-GRACVEDRADFASGSIP 2598 GC TLTD+YN + GPLY+LD + S S T W L+ L++ + + GGDCD LRI+ST W E++ HGG++YF T VTSW N + TY G RSF+ C++E + +CDG + +MG CRMDII+S MG +G+F +ESYGLTWKVR G C L N D+FE NVYGDIK SDI+ MYYG YSYGHQGGVWTNN MHDN +Y +A N VYNN NHGIIASKRCNNV IA E+++++I+ N+++ FGIR+SLGSG N +Y+N F+D +GLYTY GSD+ + S GRP N F +N + N GV+ K SD+IV N FT EE EF +++ T WSGN++ C+++ S+P Sbjct: 21 GCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGG----RSFLNCVSEKLTGE--TCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKD---LSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-----GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCIDNITSDDGNSVP 450
BLAST of mRNA_L-elsbetiae_contig5083.13120.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 296 bits (759), Expect = 1.910e-85 Identity = 193/466 (41.42%), Postives = 256/466 (54.94%), Query Frame = 1 Query: 1243 SRKATIKF--TSKAIELSG------GGCATLTDIYNAQLGNGPLYVLDKADSSSGGNRSPTGYWFLKDNLFIFDDVTLFVESKARGGDCDVLRIESTSSKHWEIKAHGGNLYFEGTKVTSWNNGKERTYTGSKSNKRSFIRCITEYDDSDKYSCDGHSSKNMGTCRMDIIDSTMGNLGYFGAESYGLTWKVRGLCTKSGKLENLDIFEDRNVYGDIKGSDIYGMYYGMYSYGHQGGVWTNNLMHDNVEYGFDPHDDSDFLTIAGNTVYNNGNHGIIASKRCNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--IAFFETYDSEIYKNKVERCLFGIRLSLGSGDNKIYNNTFDDLERYGLYTYKGSDKSEDSRSKSNKGRPFNNRFEDNTIKNVKVGVQVKESDDIVFKANTFTNVEEFEFPESKDTVWSGNT-IGRA--------CVEDRADFA 2583 S K +I++ TSK + L GGC TL DI+ G PLY + SS + S TG W L ++L++ D +TL V K+ GG D LR+ STS ++AHGG+L F TKV +W+ K + T S RS+I ++E K CDG + KNMG RMDI DS M LGYFG+ESYGLTWKVRGLC L NL++F+ NVYG+I SDI+ Y+G+Y+YGH+ G W N MH N EYGFDPHDDSDFLTI N VYNNGNHGIIASKRCN XXXXXXXXX +A ET+++++ NK E +GIR+S+G DN N +Y +YTY+GSD + + GR + + V++ +D F NTF + + F + + T+ SGN+ +G A C + ++D A Sbjct: 39 STKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKP--SSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDD-SKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRD---LSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSD----APWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGASLKVTDGSCFDKKSDSA 494 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5083.13120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5083.13120.1 >prot_L-elsbetiae_contig5083.13120.1 ID=prot_L-elsbetiae_contig5083.13120.1|Name=mRNA_L-elsbetiae_contig5083.13120.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=818bp MCSVTGKAPCIMDEEPTTPATTPTSPTPTNTDDFCTNGLPGFESGGVCCSback to top mRNA from alignment at L-elsbetiae_contig5083:1985..12550- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5083.13120.1 ID=mRNA_L-elsbetiae_contig5083.13120.1|Name=mRNA_L-elsbetiae_contig5083.13120.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10566bp|location=Sequence derived from alignment at L-elsbetiae_contig5083:1985..12550- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5083:1985..12550- >mRNA_L-elsbetiae_contig5083.13120.1 ID=mRNA_L-elsbetiae_contig5083.13120.1|Name=mRNA_L-elsbetiae_contig5083.13120.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4908bp|location=Sequence derived from alignment at L-elsbetiae_contig5083:1985..12550- (Laminarionema elsbetiae ELsaHSoW15)back to top |