mRNA_L-elsbetiae_contig508.13114.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig508.13114.1 vs. uniprot
Match: K3WVK9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVK9_GLOUD) HSP 1 Score: 97.8 bits (242), Expect = 2.250e-21 Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 4 LSIHSNFQTFPQALLALFRYTTGEAWNTAMHELFLSPAAGDGTDMPAGTSCVESPTYEEMSDAWEAMGTTTHMIGCGPHPAVTIAFFLSYLMMSSFILINIFVAIIVD 327 L H+NF+ A+L LFR+TTGEAWN M++L + P G P G SCVE +Y+ + DA MG T IGC P VT +FLSY+++++++L+N+FVA+I++ Sbjct: 374 LDEHANFKDISTAMLTLFRFTTGEAWNDVMYDLMVEPIKG-AAPYPFGVSCVEDYSYDMLLDARAFMGDATLTIGCTPGVQVTYVYFLSYMLVTTYVLLNLFVAVILE 480
BLAST of mRNA_L-elsbetiae_contig508.13114.1 vs. uniprot
Match: A0A5D6XVA6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVA6_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 2.590e-19 Identity = 45/108 (41.67%), Postives = 69/108 (63.89%), Query Frame = 1 Query: 4 LSIHSNFQTFPQALLALFRYTTGEAWNTAMHELFLSPAAGDGTDMPAGTSCVESPTYEEMSDAWEAMGTTTHMIGCGPHPAVTIAFFLSYLMMSSFILINIFVAIIVD 327 L++H+NFQ A+L LFR+TTGEAWN M++L + G P G SCVE TYE + A G IGC P +T +F+SY+++++++L+N+FVA+I++ Sbjct: 1781 LNVHANFQDIATAMLTLFRFTTGEAWNDVMYDLMVESVPG-AKPFPYGESCVEDYTYETLVHARTYAGDERLTIGCTPGVQITYIYFVSYMVVTTYVLLNLFVAVILE 1887
BLAST of mRNA_L-elsbetiae_contig508.13114.1 vs. uniprot
Match: A0A2D4BW02_PYTIN (Voltage-gated ion channel superfamily (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW02_PYTIN) HSP 1 Score: 90.1 bits (222), Expect = 1.200e-18 Identity = 42/108 (38.89%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 4 LSIHSNFQTFPQALLALFRYTTGEAWNTAMHELFLSPAAGDGTDMPAGTSCVESPTYEEMSDAWEAMGTTTHMIGCGPHPAVTIAFFLSYLMMSSFILINIFVAIIVD 327 L+ H+NF+ P A++ LFR+ TGEAWN M++L + P +G ++P G SCV +Y +++ G IGC P VT A+F+SY ++++++L+N+FVA+I++ Sbjct: 1095 LNEHANFRNVPTAMVTLFRFATGEAWNDVMYDLMVEPISG-AAEVPDGPSCVNDYSYAKLAAFRNVSGNPDLTIGCTPGITVTYAYFMSYQLVATYVLLNLFVAVILE 1201
BLAST of mRNA_L-elsbetiae_contig508.13114.1 vs. uniprot
Match: F0WPL1_9STRA (Uncharacterized protein AlNc14C187G8356 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WPL1_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.220e-18 Identity = 42/108 (38.89%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 4 LSIHSNFQTFPQALLALFRYTTGEAWNTAMHELFLSPAAGDGTDMPAGTSCVESPTYEEMSDAWEAMGTTTHMIGCGPHPAVTIAFFLSYLMMSSFILINIFVAIIVD 327 L H+NF++ A++ LFR+TTGEAWN M++L + P AG+ P G SCVE T++ + A IGC P ++T +F+SY+++++++L+N+FVA+I++ Sbjct: 1521 LDEHANFKSIKMAMVTLFRFTTGEAWNDVMYDLMVQPMAGEAP-YPYGQSCVEDYTFQMLEAARNYTKDPNLTIGCSPGISITYIYFVSYMLLTTYVLLNLFVAVILE 1627
BLAST of mRNA_L-elsbetiae_contig508.13114.1 vs. uniprot
Match: A0A024GBP9_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GBP9_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 5.770e-18 Identity = 41/108 (37.96%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 4 LSIHSNFQTFPQALLALFRYTTGEAWNTAMHELFLSPAAGDGTDMPAGTSCVESPTYEEMSDAWEAMGTTTHMIGCGPHPAVTIAFFLSYLMMSSFILINIFVAIIVD 327 L H+NF++ A++ LFR+TTGEAWN M++L + P G+ P G SCV+ T+E + A + IGC P ++T +F+SY+++++++L+N+FVA+I++ Sbjct: 1563 LDEHANFKSIRMAMVTLFRFTTGEAWNDVMYDLMVQPMEGEAP-FPYGQSCVKDYTFEMLDAARKYTKDPNLTIGCSPGISITYIYFVSYMLLTTYVLLNLFVAVILE 1669
BLAST of mRNA_L-elsbetiae_contig508.13114.1 vs. uniprot
Match: A0A8K1FRD6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRD6_PYTOL) HSP 1 Score: 81.3 bits (199), Expect = 1.550e-15 Identity = 44/108 (40.74%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 4 LSIHSNFQTFPQALLALFRYTTGEAWNTAMHELFLSPAAGDGTDMPAGTSCVESPTYEEMSDAWEAMGTTTHMIGCGPHPAVTIAFFLSYLMMSSFILINIFVAIIVD 327 L H+NFQ A++ LFR+ TGEAWN M++L + P DG SCVE TYE++ A +A G IGC P T FF +Y ++++++L+N+FVA+I++ Sbjct: 1455 LDEHANFQDVGIAMVTLFRFATGEAWNDVMYDLTVMPRH-DGVK-----SCVEDYTYEQLQAARDASGNPKLTIGCTPGVKTTYMFFFTYQLITTYVLLNLFVAVILE 1556
BLAST of mRNA_L-elsbetiae_contig508.13114.1 vs. uniprot
Match: A0A813LCQ1_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LCQ1_POLGL) HSP 1 Score: 67.4 bits (163), Expect = 1.120e-10 Identity = 40/114 (35.09%), Postives = 62/114 (54.39%), Query Frame = 1 Query: 4 LSIHSNFQTFPQALLALFRYTTGEAWNTAMHELFLSPAAGDGTDMPAGTSCVESPTYEEMSDAWEAMGTTTHMIGCGPHPAVTIAFFLSYLMMSSFILINIFVAIIVDSVSAHY 345 LS H+NFQ+F A++ L R +TGE+WN MH+ F +G C +P E D+ A+ IAFF+S++++ SF+L+N+FVA+IVD++ Y Sbjct: 1466 LSEHANFQSFYVAMVLLLRMSTGESWNRVMHDCF------------SGARCAAAPHKPECGDS-----------------AMAIAFFVSFMVLGSFVLLNLFVAVIVDNLFQIY 1550
BLAST of mRNA_L-elsbetiae_contig508.13114.1 vs. uniprot
Match: A0A699YPI0_HAELA (Voltage-gated ion channel superfamily n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YPI0_HAELA) HSP 1 Score: 65.9 bits (159), Expect = 3.440e-10 Identity = 41/136 (30.15%), Postives = 67/136 (49.26%), Query Frame = 1 Query: 4 LSIHSNFQTFPQALLALFRYTTGEAWNTAMHELFLS--------------PAAGDGTDMPAGTSCVESPTYEEMS----DAWEA---MGTTTHMIGCGPHPAVTIAFFLSYLMMSSFILINIFVAIIVDSVSAHYK 348 L+ H+NF+TFP A++ LFR TGE WN M + L P A + AGT + E +S DA + G C PA++I FF+S++++ S++L+ + +A+++DS+ Y Sbjct: 192 LTRHANFRTFPMAMITLFRCITGENWNALMQDTMLQDSCVLLLANASVSLPGADQALQLAAGTYLDKQADAETLSQLPVDAVRSEAPXGCWVQEDQCSLLPALSILFFISFMLLCSYLLLQLIIAVVLDSIQLQYN 327
BLAST of mRNA_L-elsbetiae_contig508.13114.1 vs. uniprot
Match: A0A7R9TIK6_MICPS (Hypothetical protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TIK6_MICPS) HSP 1 Score: 65.9 bits (159), Expect = 3.840e-10 Identity = 35/111 (31.53%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 16 SNFQTFPQALLALFRYTTGEAWNTAMHELFLSPAAGDGTDMPAGTSCVESPTYEEMSDAWEAMGT--TTHMIGCGPHPAVTIAFFLSYLMMSSFILINIFVAIIVDSVSAH 342 +NF+ FP ++L LFR +TGE+WN MH+ + ++ G+ ++ TY + D+ + T T ++ C P P +TI FFL +++M +F+++N+ +A+I+D+ ++ Sbjct: 989 ANFEDFPNSMLLLFRMSTGESWNGIMHDCMIEDLC---VEILTGS---DAGTYYDSGDSRLSSMTANTDYVDRCTPSPELTIFFFLLFILMCAFVMLNLVIAVILDNFESY 1093
BLAST of mRNA_L-elsbetiae_contig508.13114.1 vs. uniprot
Match: C1N208_MICPC (Voltage-gated ion channel superfamily n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N208_MICPC) HSP 1 Score: 65.9 bits (159), Expect = 3.880e-10 Identity = 35/111 (31.53%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 16 SNFQTFPQALLALFRYTTGEAWNTAMHELFLSPAAGDGTDMPAGTSCVESPTYEEMSDAWEAMGT--TTHMIGCGPHPAVTIAFFLSYLMMSSFILINIFVAIIVDSVSAH 342 +NF+ FP ++L LFR +TGE+WN MH+ + ++ G+ ++ TY + D+ + T T ++ C P P +TI FFL +++M +F+++N+ +A+I+D+ ++ Sbjct: 1461 ANFEDFPNSMLLLFRMSTGESWNGIMHDCMIEDLC---VEILTGS---DAGTYYDSGDSRLSSMTANTDYVDRCTPSPELTIFFFLLFILMCAFVMLNLVIAVILDNFESY 1565 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig508.13114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig508.13114.1 >prot_L-elsbetiae_contig508.13114.1 ID=prot_L-elsbetiae_contig508.13114.1|Name=mRNA_L-elsbetiae_contig508.13114.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=116bp ELSIHSNFQTFPQALLALFRYTTGEAWNTAMHELFLSPAAGDGTDMPAGTback to top mRNA from alignment at L-elsbetiae_contig508:30188..32720+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig508.13114.1 ID=mRNA_L-elsbetiae_contig508.13114.1|Name=mRNA_L-elsbetiae_contig508.13114.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2533bp|location=Sequence derived from alignment at L-elsbetiae_contig508:30188..32720+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig508:30188..32720+ >mRNA_L-elsbetiae_contig508.13114.1 ID=mRNA_L-elsbetiae_contig508.13114.1|Name=mRNA_L-elsbetiae_contig508.13114.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=696bp|location=Sequence derived from alignment at L-elsbetiae_contig508:30188..32720+ (Laminarionema elsbetiae ELsaHSoW15)back to top |