mRNA_L-elsbetiae_contig5076.13107.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5076.13107.1 vs. uniprot
Match: A0A6H5LKW3_9PHAE (Duf842 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LKW3_9PHAE) HSP 1 Score: 249 bits (636), Expect = 6.490e-79 Identity = 121/145 (83.45%), Postives = 132/145 (91.03%), Query Frame = 1 Query: 1 MTEHDQQALKKGFQGLGDNIDRLYARPLQKAAYLCMSKCNDNSKMSAEAVSACMKRCEVPLQEINQVVQQEVGGLQNRMQRCAMDCADEAKDMIPAGAKEGDEVVERAMAKNIKCTGGCAEKHLALLPTIEAKIKGAAERAARMS 435 MTE DQQAL+KGFQGLGDNIDR YARPLQKAAYLCMSKCNDNSKMS+EAV+ACMKRCE PLQEIN+VVQ+EVGGLQNRMQRCAMDCAD+AKD+IPAGAK GD VVERAMA+NIKCT GCA+KHLALLP +EAK+K AE A S Sbjct: 1 MTEQDQQALQKGFQGLGDNIDRFYARPLQKAAYLCMSKCNDNSKMSSEAVAACMKRCEGPLQEINKVVQEEVGGLQNRMQRCAMDCADDAKDLIPAGAKMGDAVVERAMAQNIKCTSGCAKKHLALLPNVEAKVKAVAEMVANSS 145
BLAST of mRNA_L-elsbetiae_contig5076.13107.1 vs. uniprot
Match: A0A5D6YAH7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAH7_9STRA) HSP 1 Score: 110 bits (274), Expect = 2.580e-25 Identity = 48/116 (41.38%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 52 DNIDRLYARPLQKAAYLCMSKCNDNSKMSAEAVSACMKRCEVPLQEINQVVQQEVGGLQNRMQRCAMDCADEAKDMIPAGAKEGDEVVERAMAKNIKCTGGCAEKHLALLPTIEAK 399 D +DR R LQ+ Y+C +KC DN SAE + C++RC++P Q++ +QQE+G QNR+QRCAMDC D A+D +PA + D + A C G C + H+ LLP ++ + Sbjct: 15 DALDRSVLRELQRGGYVCSAKCFDNKNWSAEQLQHCVERCQMPPQQVQGFLQQELGAFQNRLQRCAMDCQDRARDALPASGQPSDAQLASAQKSMDSCVGSCVDTHIKLLPALQKR 130
BLAST of mRNA_L-elsbetiae_contig5076.13107.1 vs. uniprot
Match: H3GXE3_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=H3GXE3_PHYRM) HSP 1 Score: 106 bits (265), Expect = 4.950e-24 Identity = 48/127 (37.80%), Postives = 78/127 (61.42%), Query Frame = 1 Query: 52 DNIDRLYARPLQKAAYLCMSKCNDNSKMSAEAVSACMKRCEVPLQEINQVVQQEVGGLQNRMQRCAMDCADEAKDMIPAGAKEGDEVVERAMAKNIKCTGGCAEKHLALLPTIEAKIKGAAERAARM 432 D +DR R +Q+ YLC +K +N S++ ++A ++RC++P Q+INQ +QQE+ QNR+QR DC D+A+D +PAG + + RA KC G C + H++LLP I ++I+ A + + Sbjct: 15 DRLDRTILRSMQRDGYLCAAKVFENKNWSSDQLAAAVERCQMPTQQINQFMQQEMQNFQNRIQRGVQDCQDKAQDALPAGGNPSEAQIARAQKDMEKCVGRCVDSHISLLPNISSRIEQAVAQVKQQ 141
BLAST of mRNA_L-elsbetiae_contig5076.13107.1 vs. uniprot
Match: A0A8K1CFK9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFK9_PYTOL) HSP 1 Score: 106 bits (265), Expect = 5.090e-24 Identity = 47/140 (33.57%), Postives = 79/140 (56.43%), Query Frame = 1 Query: 16 QQALKKGFQGLGDNIDRLYARPLQKAAYLCMSKCNDNSKMSAEAVSACMKRCEVPLQEINQVVQQEVGGLQNRMQRCAMDCADEAKDMIPAGAKEGDEVVERAMAKNIKCTGGCAEKHLALLPTIEAKIKGAAERAARMS 435 +Q L + D++DR R QK+ Y+C +KC DN + E + C++RC++P+Q++ +Q E+ QNR+QRCAM+C D A+D +P+ + + KC GC + HL LLPT+E ++ A + + + Sbjct: 3 EQKLNDAVSKMMDSLDRKVLRDFQKSGYVCAAKCFDNKGWNTEQIQNCVERCQMPMQQVQGYLQNEMQSFQNRLQRCAMECQDRARDSMPSNGNPSEAQMAGIEKDMQKCFNGCVDTHLKLLPTLEKRVTDAVSQVKQQT 142
BLAST of mRNA_L-elsbetiae_contig5076.13107.1 vs. uniprot
Match: A0A024GGH9_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GGH9_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.830e-23 Identity = 47/131 (35.88%), Postives = 80/131 (61.07%), Query Frame = 1 Query: 16 QQALKKGFQGLGDNIDRLYARPLQKAAYLCMSKCNDNSKMSAEAVSACMKRCEVPLQEINQVVQQEVGGLQNRMQRCAMDCADEAKDMIPAGAKEGDEVVERAMAKNIK-CTGGCAEKHLALLPTIEAKIK 405 +Q + G+ + +D + R QK YLC ++C D+ S+E + C++RC+ P+Q++ V+QQE+ QNR+QRCAMDC D A+D IP K D + + M K ++ C G C +K + +PT++ +++ Sbjct: 3 EQKINDAVHGMMEQLDVKFIRDFQKRGYLCSAQCFDDKTSSSEQIQNCVERCQFPMQQLQNVIQQELQSFQNRLQRCAMDCQDRARDSIPINEKV-DHMTQSRMQKEMEACVGQCVDKQIQCIPTLQKRLE 132
BLAST of mRNA_L-elsbetiae_contig5076.13107.1 vs. uniprot
Match: A0A2D4CBC7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBC7_PYTIN) HSP 1 Score: 103 bits (257), Expect = 6.390e-23 Identity = 46/135 (34.07%), Postives = 75/135 (55.56%), Query Frame = 1 Query: 16 QQALKKGFQGLGDNIDRLYARPLQKAAYLCMSKCNDNSKMSAEAVSACMKRCEVPLQEINQVVQQEVGGLQNRMQRCAMDCADEAKDMIPAGAKEGDEVVERAMAKNIKCTGGCAEKHLALLPTIEAKIKGAAER 420 +Q L + D +DR R QK Y+C +KC DN S E + C++RC++P+Q++ +Q E+ QNR+QRCAM+C D A+D +P+ D + C C + HL LLPT++ +++ A ++ Sbjct: 3 EQKLNDAVSKMMDTLDRKVLRDFQKDGYVCAAKCFDNKSWSTEQLQHCVERCQMPMQQVQNYMQNELQSFQNRLQRCAMECQDRARDSMPSSGNPSDAQMAAIEKDMQSCFNHCVDSHLKLLPTLQKRVEDAVKQ 137
BLAST of mRNA_L-elsbetiae_contig5076.13107.1 vs. uniprot
Match: G5AAL8_PHYSP (Uncharacterized protein (Fragment) n=3 Tax=Phytophthora TaxID=4783 RepID=G5AAL8_PHYSP) HSP 1 Score: 102 bits (254), Expect = 1.800e-22 Identity = 47/127 (37.01%), Postives = 76/127 (59.84%), Query Frame = 1 Query: 52 DNIDRLYARPLQKAAYLCMSKCNDNSKMSAEAVSACMKRCEVPLQEINQVVQQEVGGLQNRMQRCAMDCADEAKDMIPAGAKEGDEVVERAMAKNIKCTGGCAEKHLALLPTIEAKIKGAAERAARM 432 D +DR R +Q+ YLC +K +N S++ ++A ++RC++P Q+INQ +QQE+ Q+R+QR DC D A+D +PAG + + RA + KC C + H+ LLP I A+I+ A + + Sbjct: 15 DRLDRSVLRGMQRDGYLCAAKVFENKSWSSDQLAAAVERCQMPTQQINQFMQQEMQNFQHRIQRGVQDCQDRAQDSLPAGGAPNEAQIARAQKEMEKCVSSCVDAHIKLLPNINARIEQAVAQVKQQ 141
BLAST of mRNA_L-elsbetiae_contig5076.13107.1 vs. uniprot
Match: W4G4L4_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4L4_9STRA) HSP 1 Score: 101 bits (251), Expect = 4.270e-22 Identity = 54/143 (37.76%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 1 MTEHD-QQALKKGFQGLGDNIDRLYARPLQKAAYLCMSKCNDNSKMSAEAVSACMKRCEVPLQEINQVVQQEVGGLQNRMQRCAMDCADEAKDMIPAGAKEGDEVVERAMAKNIKCTGGCAEKHLALLPTIEAKIKGAAERAA 426 M E D QA+ K + +++D+ RPLQ+ AY+C KC DN +SAE + C++RC+ P+ ++ + QE+ QNR+QRCAM+C D AKD + + E + A A KC C + H+ LLPT++ +I+ AA Sbjct: 1 MAEADINQAVAK----MMESLDKGTFRPLQRNAYVCSVKCFDNKDVSAEQLQHCIERCQQPMAQVQNYMSQEMQTFQNRLQRCAMECQDRAKDSLSSQPSESQ--ISAAQAGMEKCVSKCVDGHIKLLPTLKKRIEDTVSSAA 137
BLAST of mRNA_L-elsbetiae_contig5076.13107.1 vs. uniprot
Match: A0A421GLK2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GLK2_9STRA) HSP 1 Score: 100 bits (250), Expect = 5.000e-22 Identity = 46/120 (38.33%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 52 DNIDRLYARPLQKAAYLCMSKCNDNSKMSAEAVSACMKRCEVPLQEINQVVQQEVGGLQNRMQRCAMDCADEAKDMIPAGAKEGDEVVERAMAKNIKCTGGCAEKHLALLPTIEAKIKGA 411 D +DR R +Q+ YLC +K +N S++ ++A ++RC++P Q+INQ +QQE+ QNR+QR DC D A+D +PA + + RA C G C ++H++LLP I ++I+ A Sbjct: 3 DRLDRNILRNMQRDGYLCAAKVFENKSWSSDQLAAAVERCQMPTQQINQFMQQEMQNFQNRIQRGVQDCQDRAQDSLPANGSPSETQIARAQKDMESCVGRCVDQHISLLPNINSRIEQA 122
BLAST of mRNA_L-elsbetiae_contig5076.13107.1 vs. uniprot
Match: A0A6G0WE45_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WE45_9STRA) HSP 1 Score: 100 bits (250), Expect = 5.750e-22 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 52 DNIDRLYARPLQKAAYLCMSKCNDNSKMSAEAVSACMKRCEVPLQEINQVVQQEVGGLQNRMQRCAMDCADEAKDMIPAGAKEGDEVVERAMAKNIKCTGGCAEKHLALLPTIEAKIKGA 411 +++D+ RP+QK Y+C KC DN SAE + AC++RC+ P+ ++ + QE+ QNR+QRCAMDC D A+D + A E + + A + KC C + H+ LLP ++ +I+ A Sbjct: 15 ESLDKSTFRPMQKNGYVCSVKCFDNKDCSAEQLQACIQRCQEPVAQVQNYLNQELSSFQNRLQRCAMDCQDRAQDGLSARPSESE--IASAQSNMEKCVSKCVDSHIKLLPALKKRIEEA 132 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5076.13107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5076.13107.1 >prot_L-elsbetiae_contig5076.13107.1 ID=prot_L-elsbetiae_contig5076.13107.1|Name=mRNA_L-elsbetiae_contig5076.13107.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=146bp MTEHDQQALKKGFQGLGDNIDRLYARPLQKAAYLCMSKCNDNSKMSAEAVback to top mRNA from alignment at L-elsbetiae_contig5076:6200..10377- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5076.13107.1 ID=mRNA_L-elsbetiae_contig5076.13107.1|Name=mRNA_L-elsbetiae_contig5076.13107.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4178bp|location=Sequence derived from alignment at L-elsbetiae_contig5076:6200..10377- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5076:6200..10377- >mRNA_L-elsbetiae_contig5076.13107.1 ID=mRNA_L-elsbetiae_contig5076.13107.1|Name=mRNA_L-elsbetiae_contig5076.13107.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=876bp|location=Sequence derived from alignment at L-elsbetiae_contig5076:6200..10377- (Laminarionema elsbetiae ELsaHSoW15)back to top |