mRNA_L-elsbetiae_contig5074.13104.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: D8LGE7_ECTSI (RECA_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE7_ECTSI) HSP 1 Score: 253 bits (645), Expect = 1.140e-79 Identity = 137/192 (71.35%), Postives = 150/192 (78.12%), Query Frame = 1 Query: 1 MASRPRM-SGVGIGGVGCPPGTQFGGSRXXXXXXXXXXXXXXXXXXXXXXXGKGGKPDPWLAGTAPPCTTALAMSRDAARLRRLSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGLGGKSYVLTCGEGDFPSRRLRQIAATFQRRHGVRPEKLMEGVCIQNAKNLDEQMMIIV 567 M SR R+ SG GI GVGCPPG Q+G +R GK KPDPWLAGTAP CTTALAMS+DAARL RLSFGC +LDAAFEGGVRVQG+TE +AGAGKTQLCLQLLLQAQLA E GGLGGKSYVLTCGEGDFPSRRLRQ+A+T+Q RHGV+PEKLMEGVCIQNAK LD+QMMII+ Sbjct: 3 MDSRSRVVSGGGISGVGCPPGPQYGVNRRQSPHGQQPHRLS----------GKSSKPDPWLAGTAPECTTALAMSKDAARLDRLSFGCPSLDAAFEGGVRVQGVTEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMASTYQSRHGVKPEKLMEGVCIQNAKTLDDQMMIIM 184
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: A0A6H5KY82_9PHAE (RECA_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY82_9PHAE) HSP 1 Score: 248 bits (634), Expect = 8.130e-77 Identity = 136/192 (70.83%), Postives = 149/192 (77.60%), Query Frame = 1 Query: 1 MASRPRM-SGVGIGGVGCPPGTQFGGSRXXXXXXXXXXXXXXXXXXXXXXXGKGGKPDPWLAGTAPPCTTALAMSRDAARLRRLSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGLGGKSYVLTCGEGDFPSRRLRQIAATFQRRHGVRPEKLMEGVCIQNAKNLDEQMMIIV 567 M SR R+ SG GI GVGCPPG Q+G +R GK KPDPWLAGTAP CTTALAM ++AARL RLSFGC +LDAAFEGGVRVQGITE +AGAGKTQLCLQLLLQAQLA E GGLGGKSYVLTCGEGDFPSRRLRQ+A+T+Q RHGV+PEKLMEGVCIQNAK LD+QMMII+ Sbjct: 3 MDSRSRLVSGGGIRGVGCPPGPQYGVNRRQPPHGQQQHRLS----------GKSNKPDPWLAGTAPECTTALAMLKNAARLDRLSFGCPSLDAAFEGGVRVQGITEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMASTYQSRHGVKPEKLMEGVCIQNAKTLDDQMMIIM 184
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: A0A7S3F398_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F398_9EUKA) HSP 1 Score: 77.4 bits (189), Expect = 1.890e-13 Identity = 55/133 (41.35%), Postives = 74/133 (55.64%), Query Frame = 1 Query: 238 LRRLSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGLGGKSYVLTCGEGDFPS-----RRLRQIAATFQRRH---GVRPEKLMEGVCIQNAKN---LDEQMMIIVSAFLVAQQLR 597 +R+LS GC +LD GG+ GITE +AGAGKTQL LQLLL+ QL GGLGG + L D PS RLR +AATF +H G ++LM+ V + + L+E + V + L +Q+R Sbjct: 33 MRKLSLGCPHLDRCLAGGIDHSGITEIAGEAGAGKTQLVLQLLLRVQLPHALGGLGGGAIFL---HSDAPSYMPAMSRLRSLAATFANQHRAYGATSDRLMDNVAVMQVDHPDDLEEILRTAVPSHLRVKQVR 162
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: A0A2G8LRK6_STIJA (Putative DNA repair protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LRK6_STIJA) HSP 1 Score: 78.6 bits (192), Expect = 5.330e-13 Identity = 46/85 (54.12%), Postives = 56/85 (65.88%), Query Frame = 1 Query: 241 RRLSFGCSNLDAAFEGGVRVQGITEA--KAGAGKTQLCLQLLLQAQLATEEGGL-GGKSYVLTCGEGDFPSRRLRQIAATFQRRH 486 + LS GC LD F GG+ QGITE ++ AGKTQLCLQL L AQL E+GGL GG YV C E FPS+RL+Q+ +F +H Sbjct: 106 KSLSLGCPILDEIFRGGILSQGITEVTGESAAGKTQLCLQLCLMAQLPLEDGGLNGGAVYV--CTEDVFPSKRLQQLIKSFPAQH 188
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: A0A537F041_9ARCH (DNA repair and recombination protein RadA n=4 Tax=Archaea TaxID=2157 RepID=A0A537F041_9ARCH) HSP 1 Score: 75.5 bits (184), Expect = 4.690e-12 Identity = 42/120 (35.00%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 238 LRRLSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGLGGKSYVLTCGEGDFPSRRLRQIAATFQRRHGVRPEKLMEGVCIQNAKNLDEQMMIIVSAFLVAQQ 591 L+RLSFG +NL+ GG+ Q ITE + GAGK+Q+C++L + AQ ++GGL G+ + EG F ++R+ Q+A + Q + PEK+++G+ N D Q++ + +F + ++ Sbjct: 80 LQRLSFGSNNLNKLLGGGLETQAITEFVGEFGAGKSQICMRLSVNAQQLNKDGGLEGRVLFIDT-EGTFSAQRVHQMAQSLQ----LDPEKVLDGIIYSRVYNSDHQILTVDHSFKICKE 194
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: UPI001EE62721 (DNA repair protein XRCC3-like isoform X1 n=4 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE62721) HSP 1 Score: 74.7 bits (182), Expect = 1.020e-11 Identity = 48/103 (46.60%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 193 PPCTTALAM---SRDAARLRRLSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGL-GGKSYVLTCGEGDFPSRRLRQIAATFQRR 483 PP TAL + S +R+LS GC +D +GG+ GITE ++ +GKTQLCLQL L AQL E GGL GG YV C E FP++RL Q+ F R+ Sbjct: 63 PPVVTALELLKGSGSVVPIRKLSTGCPIIDRHLKGGILSTGITEISGESASGKTQLCLQLCLTAQLPLEHGGLEGGAVYV--CTEDAFPNKRLHQVIQHFTRK 163
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: A0A0M0LPY7_9EUKA (DNA repair protein xrcc3 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LPY7_9EUKA) HSP 1 Score: 73.6 bits (179), Expect = 1.740e-11 Identity = 46/90 (51.11%), Postives = 53/90 (58.89%), Query Frame = 1 Query: 229 AARLRRLSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGLGGKSYVLTCGEGDFPS--RRLRQIAATFQRRH 486 A R L GC +LDA GG+ GITE +AGAGKTQL LQL LQAQL EGGLGG + L G + RRL Q+A F +RH Sbjct: 5 AGHTRLLKTGCPHLDAFLGGGIDTNGITEIAGEAGAGKTQLALQLTLQAQLPPAEGGLGGAAVYLYGGTANVEPALRRLHQLADAFAKRH 94
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: A0A7M7GGZ6_STRPU (RECA_2 domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7GGZ6_STRPU) HSP 1 Score: 73.9 bits (180), Expect = 2.010e-11 Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 247 LSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGLGGKSYVLTCGEGDFPSRRLRQIAATFQRRHG 489 L+ GC LD GG+ V+GITE ++ AGKTQLCLQL L AQL ++GGL V C E FPS+RL+Q+ ++F RR G Sbjct: 81 LTTGCPILDEFLHGGILVKGITEIAGQSAAGKTQLCLQLCLTAQLPVQQGGLAN-GVVYICTEDVFPSKRLQQLISSFNRRIG 162
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: A0A1Q3AVJ9_CEPFO (Rad51 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3AVJ9_CEPFO) HSP 1 Score: 72.0 bits (175), Expect = 6.090e-11 Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 1 Query: 241 RRLSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGLGGKS-YVLTCGEGDFPSRRLRQIAATFQRRHG---VRPEKLMEGVCIQNAKNLDEQMMIIVSAFLVAQQLRSNLPMYTCIYQGV 636 ++ + GC LD +GG+ +TE A++G+GKTQLCLQL L AQL + GGL S Y+ T E FP RRL Q++ +FQ H V + + V +++ + D+ + I+ A L++ LP+ + + Sbjct: 14 QKCTLGCPVLDRCLDGGIPCNSVTELVAESGSGKTQLCLQLSLMAQLPSSLGGLASSSLYIHT--EFPFPIRRLHQLSTSFQHLHPQLYVHGDNPCDYVFVRSVYSADQLLDIMSKAEFFIANLKTRLPVRLVVIDSI 149
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Match: D6WL17_TRICA (Spindle B n=3 Tax=Tribolium castaneum TaxID=7070 RepID=D6WL17_TRICA) HSP 1 Score: 72.0 bits (175), Expect = 6.760e-11 Identity = 42/79 (53.16%), Postives = 50/79 (63.29%), Query Frame = 1 Query: 244 RLSFGCSNLDAAFEGGVRVQGITE--AKAGAGKTQLCLQLLLQAQLATEEGGLGGKSYVLTCGEGDFPSRRLRQIAATF 474 R+S GCS +DA GG+ V I+E AG GKTQLCLQL L AQL GGLG KS V C E FP +RL+ +A T+ Sbjct: 73 RISTGCSAIDAITRGGIAVNRISEIVGYAGVGKTQLCLQLSLMAQLPISLGGLG-KSVVYLCTEDAFPIKRLKDLAITY 150 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5074.13104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5074.13104.1 >prot_L-elsbetiae_contig5074.13104.1 ID=prot_L-elsbetiae_contig5074.13104.1|Name=mRNA_L-elsbetiae_contig5074.13104.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=224bp MASRPRMSGVGIGGVGCPPGTQFGGSRRQQSSHGHQQQRPQQQQQQQRSGback to top mRNA from alignment at L-elsbetiae_contig5074:9758..13233+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5074.13104.1 ID=mRNA_L-elsbetiae_contig5074.13104.1|Name=mRNA_L-elsbetiae_contig5074.13104.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3476bp|location=Sequence derived from alignment at L-elsbetiae_contig5074:9758..13233+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5074:9758..13233+ >mRNA_L-elsbetiae_contig5074.13104.1 ID=mRNA_L-elsbetiae_contig5074.13104.1|Name=mRNA_L-elsbetiae_contig5074.13104.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1344bp|location=Sequence derived from alignment at L-elsbetiae_contig5074:9758..13233+ (Laminarionema elsbetiae ELsaHSoW15)back to top |