mRNA_L-elsbetiae_contig5074.13103.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5074.13103.1
Unique NamemRNA_L-elsbetiae_contig5074.13103.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5074.13103.1 vs. uniprot
Match: D8LGE8_ECTSI (EDR2_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGE8_ECTSI)

HSP 1 Score: 437 bits (1123), Expect = 1.390e-148
Identity = 243/334 (72.75%), Postives = 259/334 (77.54%), Query Frame = 3
Query:  210 VGATVTHADCSSADGVGMPPHSWSQVDPSKFMVRQGPNYSKHKRKDRNAGGSCYELRAMDWYKAGQKVDGVAKLAAA-ALPEAKFSHPSVPSLLVVNVQLPTESPDLFKSGKLDGPTLHAVFYFTLKEETAKALQDLGSAEPSVRLLAEYFRRAESEPAMRSRFKAIAVVNNQEVINMARLISPFNGKPVLITESGSLARGARKASAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGADEFLELDVHVRRWNFMARKGLNKLTPKFGLINVSVAFLIEGREDAELPEQVLGCATANCFDISKARDISA 1208
            V ATV   DC SADG GMPPHSWSQ+D  KFMVR GPNYSK+KRK RNAGGS YE RAMDWY+   KVDGVAKLAAA  LPEAKFSHPSVPSLLVVNVQLP ESP  FK  KLDGPTLHAVFY TL+EETAKALQDL SAEPSVRLLAEYFRRAESEP MR+RFKAIAVVNNQEVINMARLI+PFNGKPVLITESG+L RG R+  A                     XXXXXXXXXXX                      FGADEFLELD+HVRRWNFMARKGL+KLTPKFGLINVSVAFL+EGRED+ELPEQ+LGCAT NCFD +KAR++ A
Sbjct:    3 VRATVPQVDCPSADGAGMPPHSWSQLDAEKFMVRHGPNYSKNKRKGRNAGGSFYEARAMDWYRGTGKVDGVAKLAAAEGLPEAKFSHPSVPSLLVVNVQLPMESPQAFKGAKLDGPTLHAVFYLTLREETAKALQDLESAEPSVRLLAEYFRRAESEPEMRTRFKAIAVVNNQEVINMARLIAPFNGKPVLITESGTLMRGTRRPGAEGEGAPDSVARVESDSAGSNGXXXXXXXXXXX----------------------FGADEFLELDIHVRRWNFMARKGLSKLTPKFGLINVSVAFLVEGREDSELPEQILGCATVNCFDTTKAREVDA 314          
BLAST of mRNA_L-elsbetiae_contig5074.13103.1 vs. uniprot
Match: A0A835ZBF7_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF7_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.420e-43
Identity = 110/341 (32.26%), Postives = 163/341 (47.80%), Query Frame = 3
Query:  201 MEVVGATVTHADCSSADGVGMPPHSWSQVDPSKFMVRQGPNYSKHKRKDRNAGGSCYELRAMDWYK-AGQKVDGVAKLAAAALPEAKFSHPSVPSLLVVNVQLPTESPDLFKSGKLDGPTLHAVFYFTLKEETAKALQDLG-----SAEPSVRLLAEYFRRAESEPAMRSRFKAIAVVNNQEVINMARLISPFNGKPVLITESGSLARGARKASAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGADEFLELDVHVRRWNFMARKGLNKLTPKFGLINVSVAFLIEGREDAELPEQVLGCATANCFDISKARDIS 1205
            + V GA++     ++A G     H W+    S FMVR GPNY +   K  +A  + YE+ A+DW+  AG+K D V        P     HPS+PS+++VN QLP E+P +     LDGPTL  VFY  L  E A+AL         +  P+++LL ++   AE++   RSRFKA+A +NN     +   +   NG+P LIT+SG++  G  +                                                          G+  +LELD +VR W F+AR+ L  L P+   +++S+ F+IEGR DAELPEQ+LGC      D  +A +++
Sbjct:  166 LPVAGASLPQLAAAAAHGEHPLTHCWAPTKASSFMVRHGPNYKRRGLKVPSAP-ALYEVVAVDWFTCAGRKADNVGARVLLPAPPHASPHPSIPSIIIVNAQLPLEAPSMVAPA-LDGPTLQCVFYLALSAEAARALAXXXXXXXXALPPALQLLRDWCEGAEADAHTRSRFKAMARINNLHDAGLPGPVVQNNGRPTLITKSGTVTSGVGRVRGG------------------------------------------------------GSARYLELDCNVRHWCFLARRALRHLLPRAPRVHLSIGFVIEGRADAELPEQILGCCELGGVDPDRAVELA 450          
BLAST of mRNA_L-elsbetiae_contig5074.13103.1 vs. uniprot
Match: A0A835Z0S6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S6_9STRA)

HSP 1 Score: 159 bits (403), Expect = 1.750e-39
Identity = 183/423 (43.26%), Postives = 225/423 (53.19%), Query Frame = 3
Query:  213 GATVTHAD-----CSSADGVGMPP--HSWSQVDPSKFMVRQGPNYSKHKRKDRNAGGSCYELRAMDWY-KAGQKVDGVAKLAAAALPEAKFSHPS----------------------------VPSLLVVNVQLPTESPDLFKSGKLDGPTLHAVFYFTLKEETAKAL-------------------------------QDLGSA-------------EPSVRLLAEYFRRAESEPAMRSRFKAIAVVNNQEVINMARLISPFNGKPVLITESGSLARGARKASAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTF------------GADEFLELDVHVRRWNFMARKGLNKLTPKFGLINVSVAFLIEGREDAELPEQVLGCATANCFDISKARDIS 1205
            GATV  AD      ++  G    P  HSWS +    F+VR GPNY K   K  +   + Y++   D +  A  KVDG+A   A   P     HP                             VPSLLVVN+QLP E P +F S  LDGPTLH VFYF L  E A+AL                               +D GS+              P++RLL E+   AE++  MR RFKAI VVNN E   +  LI+ +NGKPVL+T+SG+L R +     ++XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXX               A   LE+D +VR W ++ARKGL+ L P+F   ++ VAF++EGR DAELPE+VL CA     D  +AR I+
Sbjct:   75 GATVPRADVDGHPAAATHGAQQRPPLHSWSPLRAGVFLVRHGPNYRKRGLKAASEA-ALYDMVGCDLFTSAHAKVDGIADRVALPAPPHASPHPLLSCHARPLHAPLPLPPPRRRAQVLSLLVVPSLLVVNIQLPLEHPTVF-SPALDGPTLHCVFYFALSAEAARALAVXXXXXXXXXXXXXPHVRARRRAYHAQRLPRDNGSSGGGSGGAAETAHLSPALRLLCEFCAAAEADAEMRGRFKAIGVVNNVEEAGIPSLIAQYNGKPVLVTKSGTLRRVSGGGGGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAPHLEMDCNVRHWCYLARKGLHHLLPRFARTSLRVAFVLEGRADAELPERVLACAQLEGMDPRRARAIA 495          
BLAST of mRNA_L-elsbetiae_contig5074.13103.1 vs. uniprot
Match: A0A7S2KYG5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KYG5_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.980e-33
Identity = 100/329 (30.40%), Postives = 158/329 (48.02%), Query Frame = 3
Query:  225 THADCSSADGVGMPPHSWSQVDPSKFMVRQGPNYSKHKRKDRNAGGSCYELRAMDWYKAGQKVDGVAKLAAAALP------EAKFSHPSVPSLLVVNVQLPTESPDLFKSGKLDGPTLHAVFYFTLKEETAKALQDLGSAEPSVRLLAEYFRRAESEPAMRSRFKAIAVVNNQEVINMARLISPFNGKPVLITESGSLARGARKASAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGADEFLELDVHVRRWNFMARKGLNKLTPKFGLINVSVAFLIEGREDAELPEQVLGCATANCFDISKA 1193
            TH+D        + P ++  V+PS F +R GP+Y ++K+K   +G + ++L  MD + +   +  V    A  +P      + +  H  VP ++V+N  +PT+ P LFK  KLDGP   AV Y  + ++T   L+DL +A P+V+LL E+ RRAE + A RSR K + V ++ E + +   ++ +NGKP LIT SG+L R    AS                                                            +LE++V++R WN +ARKG++ L P       ++A  IEGR++ ELPE +LG      FD ++A
Sbjct:  447 THSDSHEKQCYQVQPQTFWNVNPSAFKLRIGPDYKRNKQKA-PSGPALFDLITMDIFNSDAGLKNVGD--AFHMPNIPGVTDVETGHRHVPPMIVMNTMIPTDEPSLFKP-KLDGPCCMAVLYLAISKQTLLELKDLKTASPAVKLLEEWCRRAEGDFAFRSRCKFMVVADDVEALGVPSFLTRYNGKPCLITSSGTLTRHRDAAS-----------------------------------------------------------HYLEMNVNIRMWNALARKGIHSLKPYIPSATFNLAITIEGRDNDELPEVLLGGCRMMNFDFAQA 712          
BLAST of mRNA_L-elsbetiae_contig5074.13103.1 vs. uniprot
Match: A0A7S2M600_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M600_9STRA)

HSP 1 Score: 134 bits (337), Expect = 5.160e-30
Identity = 93/319 (29.15%), Postives = 145/319 (45.45%), Query Frame = 3
Query:  249 DGVGMPPHSWSQVDPSKFMVRQGPNYSKHKRKDRNAGGSCYELRAMDWYKAGQKVDGVA-KLAAAALP---EAKFSHPSVPSLLVVNVQLPTESPDLFKSGKLDGPTLHAVFYFTLKEETAKALQDLGSAEPSVRLLAEYFRRAESEPAMRSRFKAIAVVNNQEVINMARLISPFNGKPVLITESGSLARGARKASAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGADEFLELDVHVRRWNFMARKGLNKLTPKFGLINVSVAFLIEGREDAELPEQVLGCATANCFDISKA 1193
            + + + PHS+ Q D S F +R GPNY ++K+K  +A  + Y+L +MD+      +  V+ K    ++P   +    H  +P +LV+N  LP E P +F     DG T      F L ++T + L+D+ +A P V+LL+E+ RRAESEP  + RFK +  + + E  ++ + I  +NGKP L+T+SG+  R                                                                + ++E  ++V  W F+ARKGL+ L P F     +V F IE R D E+PE +LG       D  KA
Sbjct:  339 ESIQVQPHSYVQTDSSLFNLRIGPNYKRNKQKAPSAP-ALYDLYSMDFLYDSTALKNVSDKFKIPSIPGITDVSTGHAHIPPMLVINTWLPGEEPSVFAKNT-DGDTYSIPMVFVLSKDTLEQLKDIDTASPGVKLLSEWCRRAESEPDFKGRFKCMGQIEDIESTSIPKFIHGYNGKPALVTKSGTFTRH---------------------------------------------------------------ENYIEFTINVNYWAFLARKGLHSLMPYFQDFIFNVGFTIEARHDEEMPEVLLGGCRIMNLDPDKA 592          
BLAST of mRNA_L-elsbetiae_contig5074.13103.1 vs. uniprot
Match: W7U5D7_9STRA (EDR2_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5D7_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.700e-29
Identity = 99/333 (29.73%), Postives = 147/333 (44.14%), Query Frame = 3
Query:  255 VGMPPHSWSQVDPSKFMVRQGPNYSKHKRKDRNAGGSCYELRAMDWYKAGQK-VDGVAKLAAAALPEAKFSHPSVPSLLVVNVQLPTESPDLFKSGKLDGPTLHAVFYFTLKEETAKALQ-------------------DLGSAEPSVRLLAEYFRRAESEPAMRSRFKAIAVVNNQEVINMARLISPFNGKPVLITESGSLARGARKASAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGADEFLELDVHVRRWNFMARKGLNKLTPKFGLINVSVAFLIEGREDAELPEQVLGCATANCFDISKA 1193
            + +P HSW     S F VR   +Y + K+K+ +   + Y+L + D  KA    V+ V +L          S P +P L +VN QLP   P +F +   +GP   A+F F LKE T   L+                   +  S  P+++LL EYFRRA  +P +R R K IA   N + +++   IS +NGKPVLIT+SG L +G   ++                                                            ++E+D+ V R+ ++ARKG   L  +F  + + +AFL+EGRE+ ELPEQ+LG A  N  D   A
Sbjct:  118 LALPRHSWGHTSASSFRVRSR-HYKRAKKKEPSLE-AFYKLVSFDLIKASVGCVNHVGRLMDLEKVRPARSFPGLPPLFIVNTQLPDGEPAMFNASD-NGPGRSAIFVFALKESTVDMLEAHADSPSAAVRERKGKDHREAFSVPPALQLLQEYFRRAPHDPDVRGRLKVIASCANMDALHLPSFISNYNGKPVLITKSGRLHQGISSSNGEDLL-------------------------------------------------------YIEMDICVHRFAYVARKGFRYLQKRFSKMILDIAFLVEGREEDELPEQILGAARLNNVDYEAA 392          
BLAST of mRNA_L-elsbetiae_contig5074.13103.1 vs. uniprot
Match: A0A7S2W974_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W974_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.610e-28
Identity = 94/299 (31.44%), Postives = 140/299 (46.82%), Query Frame = 3
Query:  270 HSWSQVDPSKFMVRQGPNYSKHKRKDRNAGGSCYELRAMDWYKAGQKVDGVAKLAAAALPEAKFSHP---SVPSLLVVNVQLPTESPDLFKSGKLDGPTLHAVFYFTLKEETAKALQDLGSAEPSVRLLAEYFRRAESEPAMRSRFKAIAVVNNQEVINMARLISPFNGKPVLITESGSLARGARKASAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGADEFLELDVHVRRWNFMARKGLNKLTPKFGLINVSVAFLIEGREDAELPEQVLG 1157
            H+W   D  +F +R GPNY K+ RK+  +G    EL  +D +K+   V  + +  A  LPE +   P   +VP + VV+  LP E+P +   G  +GPTL+AVFYF L+EET +AL  L +A  +V+LL  + R A ++P++ +RFK I ++ N E + M  ++  +NGKPVLI       R A K  +                                                          + + + V+VR W  +AR GL+ L       ++ V F IEGR D ELPE +LG
Sbjct:   80 HAWEPGDHQRFRLRVGPNYKKYGRKE-PSGPVLLELLEVDLFKSSALVHNLGEFIA--LPEPRVPVPEGSAVPPIFVVHGSLPFEAPSML--GNSNGPTLNAVFYFGLREETQQALASLETAPKAVQLLETFCRSAHADPSVFNRFKCIGMLRNYEEVGMPSIMKGYNGKPVLIRN-----RSAVKGGSGVMDQQ---------------------------------------------------QDSIIMHVNVRLWPLLARTGLHTLFGASAKCDLDVGFTIEGRADDELPEVLLG 317          
BLAST of mRNA_L-elsbetiae_contig5074.13103.1 vs. uniprot
Match: A0A6S8XZU4_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XZU4_9STRA)

HSP 1 Score: 127 bits (318), Expect = 2.040e-27
Identity = 93/316 (29.43%), Postives = 147/316 (46.52%), Query Frame = 3
Query:  270 HSWSQVDPSKFMVRQGPNYSKHKRKDRNAGGSCYELRAMDWYKAGQKVDGVAKLAAAA--------LPEAKFSHPSVPSLLVVNVQLPTESPDLFKSGKL-DGPTLHAVFYFTLKEETAKALQDLGSAEPSVRLLAEYFRRAESEPAMRSRFKAIAVVNNQEVINMARLISPFNGKPVLITESGSLARGARKASAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGADEFLELDVHVRRWNFMARKGLNKLTPKFGLINVSVAFLIEGREDAELPEQVLGCATANCFDISK 1190
            +++  VD   F +R GPNY K++ K+ ++  + Y+L ++D+ +A    D   K A+ A        + +    HP VP + V+N  +P E   +F  GK+ D P+++ V    + E T KAL+D+ +A P+V+L AE+ R AE++   R+RFKA+ +V + E  N+   I+ +NGKP L+T+SG+  R                                                                + ++E  V+V  W F+ARKGL  LTPKF    + + F IE + D ELPE +LG      FD  K
Sbjct:  391 NAYWNVDARNFNLRVGPNYKKNRLKEPSSP-ALYDLISVDFIRA----DTTLKKASDAFTVPNIPGITDIDTGHPHVPPMFVINAWIPLEDHGVF--GKVTDAPSINCVMCLAIAEHTLKALKDIDNAPPAVKLFAEWCRIAETDDEFRARFKALGIVCDIEKTNIPSFIASYNGKPALVTKSGTFIRH---------------------------------------------------------------EHYIEFCVNVHMWGFLARKGLVTLTPKFAEFVLDIGFTIEAKRDHELPEVLLGGMRLIHFDPEK 636          
BLAST of mRNA_L-elsbetiae_contig5074.13103.1 vs. uniprot
Match: A0A6T8K6G2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8K6G2_9STRA)

HSP 1 Score: 119 bits (299), Expect = 3.180e-27
Identity = 79/268 (29.48%), Postives = 125/268 (46.64%), Query Frame = 3
Query:  387 DWYKAGQKVDGVAKLAAAALPEAKFSHPSVPSLLVVNVQLPTESPDLFKSGKLDGPTLHAVFYFTLKEETAKALQDLGSAEPSVRLLAEYFRRAESEPAMRSRFKAIAVVNNQEVINMARLISPFNGKPVLITESGSLARGARKASAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGADEFLELDVHVRRWNFMARKGLNKLTPKFGLINVSVAFLIEGREDAELPEQVLGCATANCFDISK 1190
            D ++    +DGV K+           +  VPSL+V+N  +PTE P +F   + DG T   + Y  + + T   L+D+  A P+V+LL E+ +++E++ +MRSR KA+ ++++ E  ++   IS FNGKPVLIT+S +  R                                                                  ++EL V++ +W +M +KGL  L PKF  +  +V F IEGRED ELPE +LG A  N  D+++
Sbjct:   34 DDFQIPDNIDGVTKI--------DTGNVHVPSLIVLNFNIPTEEPSVFGKAE-DGETCVLILYLVIAKHTINQLKDMNKASPAVKLLVEWCKKSENDFSMRSRMKAMCLIDDVENSSLPGFISRFNGKPVLITKSSTFTR---------------------------------------------------------------FPNYIELQVNIHKWAYMPKKGLFSLQPKFPSLAFNVGFTIEGREDDELPEVLLGGARINKIDMNR 229          
BLAST of mRNA_L-elsbetiae_contig5074.13103.1 vs. uniprot
Match: A0A2R5GG71_9STRA (Protein ENHANCED DISEASE RESISTANCE 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GG71_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.520e-27
Identity = 98/348 (28.16%), Postives = 155/348 (44.54%), Query Frame = 3
Query:  207 VVGATVTHADCSSADGVGMPPHSWSQVDPSKFMVRQGPNYSKHKRKDRNAGGSCYELRAMDWYKAGQKVDGVAKL----AAAALPEAKFSHPSV----PSLLVVNVQLPTESPDLFKSGKLDGPT-LHAVFYFTLKEETAKALQD---LGSAE-PSVRLLAEYFRRAESEPAMRSRFKAIAVVNNQEVINMARLISPFNGKPVLITESGSLARGARKASAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGADEFLELDVHVRRWNFMARKGLNKLTPKFGLINVSVAFLIEGREDAELPEQVLGCATANCFDISKARDISAA 1211
            V GAT   A  S  DGV   P+SWS  D S+F VR GPNY++ KRK  +   S Y    MD ++     DG  ++    A   LPE++ SH  V    P +++ N+Q+P  +P +F  GK D    L  V YF +K  T   L++    GS   PS+ LL ++FR   +   +R RFK I  V N   + +  +   +NGKP ++ ++G++  G    +                                                          D ++E D++V  + ++ARK L+ +  +   + +  AF+++G +D ELPEQV  C+  +  D+  AR +  A
Sbjct:  155 VAGATTQEA--SERDGV---PNSWSDGDASEFKVRAGPNYARTKRKQASKD-SYYRQIGMDLFR--NTYDGATRISNIGAHVKLPESRLSHIPVGCPFPRIIIFNIQVPVAAPKMF--GKSDPDAGLSLVQYFEIKRSTLDQLEEQDRTGSPPTPSIALLTKFFREYRTSDDVRRRFKIIGHVLNMVEVGVPSMFQSYNGKPAIVFKTGTIFSGPIDGNVQ--------------------------------------------------------DHYVEFDINVHEFAYLARKALHSMIDRVPQMRLRCAFVLQGEDDEELPEQVFACSALHNLDLRTARPVDLA 436          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5074.13103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGE8_ECTSI1.390e-14872.75EDR2_C domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A835ZBF7_9STRA2.420e-4332.26EDR2_C domain-containing protein n=1 Tax=Tribonema... [more]
A0A835Z0S6_9STRA1.750e-3943.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2KYG5_9STRA2.980e-3330.40Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2M600_9STRA5.160e-3029.15Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
W7U5D7_9STRA1.700e-2929.73EDR2_C domain-containing protein n=2 Tax=Monodopsi... [more]
A0A7S2W974_9STRA1.610e-2831.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6S8XZU4_9STRA2.040e-2729.43Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A6T8K6G2_9STRA3.180e-2729.48Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A2R5GG71_9STRA3.520e-2728.16Protein ENHANCED DISEASE RESISTANCE 2 n=1 Tax=Hond... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5074contigL-elsbetiae_contig5074:4963..9631 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score447.2
Seed ortholog evalue6.8e-123
Seed eggNOG ortholog2880.D8LGE8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein of unknown function (DUF1336)
EggNOG OGs2CYY6@1,2S76H@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionDomain of unknown function DUF1336
Ec32 orthologEc-16_003780.1
Exons4
Model size1556
Cds size1014
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5074.13103.1prot_L-elsbetiae_contig5074.13103.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5074 5305..9431 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816514.5378528-UTR-L-elsbetiae_contig5074:4962..53041622816514.5378528-UTR-L-elsbetiae_contig5074:4962..5304Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5074 4963..5304 -
1691683614.9784167-UTR-L-elsbetiae_contig5074:4962..53041691683614.9784167-UTR-L-elsbetiae_contig5074:4962..5304Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5074 4963..5304 -
1622816514.598423-UTR-L-elsbetiae_contig5074:9431..96311622816514.598423-UTR-L-elsbetiae_contig5074:9431..9631Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5074 9432..9631 -
1691683615.0353973-UTR-L-elsbetiae_contig5074:9431..96311691683615.0353973-UTR-L-elsbetiae_contig5074:9431..9631Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5074 9432..9631 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816514.5512133-CDS-L-elsbetiae_contig5074:5304..53821622816514.5512133-CDS-L-elsbetiae_contig5074:5304..5382Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5074 5305..5382 -
1691683614.9893913-CDS-L-elsbetiae_contig5074:5304..53821691683614.9893913-CDS-L-elsbetiae_contig5074:5304..5382Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5074 5305..5382 -
1622816514.565146-CDS-L-elsbetiae_contig5074:6175..66501622816514.565146-CDS-L-elsbetiae_contig5074:6175..6650Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5074 6176..6650 -
1691683614.998252-CDS-L-elsbetiae_contig5074:6175..66501691683614.998252-CDS-L-elsbetiae_contig5074:6175..6650Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5074 6176..6650 -
1622816514.577452-CDS-L-elsbetiae_contig5074:7701..78471622816514.577452-CDS-L-elsbetiae_contig5074:7701..7847Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5074 7702..7847 -
1691683615.0110328-CDS-L-elsbetiae_contig5074:7701..78471691683615.0110328-CDS-L-elsbetiae_contig5074:7701..7847Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5074 7702..7847 -
1622816514.5878098-CDS-L-elsbetiae_contig5074:9116..94311622816514.5878098-CDS-L-elsbetiae_contig5074:9116..9431Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5074 9117..9431 -
1691683615.0248098-CDS-L-elsbetiae_contig5074:9116..94311691683615.0248098-CDS-L-elsbetiae_contig5074:9116..9431Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5074 9117..9431 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5074.13103.1

>prot_L-elsbetiae_contig5074.13103.1 ID=prot_L-elsbetiae_contig5074.13103.1|Name=mRNA_L-elsbetiae_contig5074.13103.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=338bp
MEVVGATVTHADCSSADGVGMPPHSWSQVDPSKFMVRQGPNYSKHKRKDR
NAGGSCYELRAMDWYKAGQKVDGVAKLAAAALPEAKFSHPSVPSLLVVNV
QLPTESPDLFKSGKLDGPTLHAVFYFTLKEETAKALQDLGSAEPSVRLLA
EYFRRAESEPAMRSRFKAIAVVNNQEVINMARLISPFNGKPVLITESGSL
ARGARKASAAAAGAGEGAPADGPPDSVPVVGGSGGGNGSGSDGGGSSGRS
GGSSSSSSSSSSTFGADEFLELDVHVRRWNFMARKGLNKLTPKFGLINVS
VAFLIEGREDAELPEQVLGCATANCFDISKARDISAA*
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mRNA from alignment at L-elsbetiae_contig5074:4963..9631-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5074.13103.1 ID=mRNA_L-elsbetiae_contig5074.13103.1|Name=mRNA_L-elsbetiae_contig5074.13103.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4669bp|location=Sequence derived from alignment at L-elsbetiae_contig5074:4963..9631- (Laminarionema elsbetiae ELsaHSoW15)
CAGAGGGTTCCGTGGAACTAACGTGTGATACACAGAGCACCGCAGACTCT GTGCGTGCTGCGAAGTTCCTGGGGGCAAGAGGAAGGCATATATAATTGAA AAACAGACTTTGCAGAGAGGAGGGCTGAGAAGCGAGAGAGGTCCCACCGC CGTCGCAACTGCAACGTTAAATCGGTTCTACATAGCTATTCGGTTTCACA ATGGAGGTCGTCGGAGCCACGGTAACGCACGCCGACTGCTCCTCAGCAGA CGGCGTGGGCATGCCGCCGCACAGCTGGTCCCAGGTCGATCCGAGCAAGT TCATGGTGCGTCAGGGACCGAACTATTCCAAGCACAAGCGGAAGGATAGA AACGCCGGGGGTTCGTGCTACGAGCTCCGCGCGATGGACTGGTACAAGGC TGGTCAGAAGGTGGACGGGGTGGCCAAGCTGGCTGCAGCAGCGCTTCCCG AGGCGAAGTTCAGCCACCCATCTGTGCCTTCGTTGCTGGTGGTAAACGTG CAGTTGCCGACTGAGGTGAGGGCAGAGAATCGCGTGTCTCGTCGGTTTGT GTGTTGTCGGGGGTTACACCGCTTCTGAGACGGAATTGCCGCCGCGTGCC GCATAGACTATGTACACATGTACACGTATTTAGGCACGTGCTGTCTATCC CAGCATCATTGCGCAGCCTCGTTGCCGTACGTGGCAGGCTTGGCAGGCGC AAGTTCTAACTTGTGCGCTCTCCGGCATAACCCTTCTGCTGCTGCCGTGT AGACATGTGTGCAACAACAGCGGGTTGAACAAAACCAACACGCCCGATTA TCGTATTTACAACAGCAGCTCAGTCGTGAACGGTCAGAACTTCCAAACGT TGGCTTGAGCAGCAGTACAATGGTTGGAGTGAGATAAGGATGCTCCTATG GTAGCAGCCCGTCTTAAGTGGGCGATAAGGGACTGGGTTCACGTCACGCA GGTTGGCGGTTTTGTTTGACAGGCGAACGCAACCTACAACTCGATGTATC TACACACGACCTCACCGACAGGACTTGGACACCATCGTAGCCGGGGTGGA GAGGGCGGGTGTGCGTTAGTTTGCCTTCAACAGTTGCCCCTGGAATGAAA TAAGAATGTTTGCAGACTGCGGGCGGCCTTTGTAGGAAAAGTAACTAATT TGAATAACGCAGCATCATTATCTTGGTTACCCATGTACACCGGCTTATAA CTGCTGGGCAGCCCATACTTTTTGCATTGGCGCCCAACACAGCTCAAGAC ACCCCTTCTCCAGAGAGCACAAGTAGCGTCGATTTATGTTAGCATACTGA GTATTTATCGACGGCCGAGACAGAGTCAAGCATATAATCCATGTCTCCCG AATGCAGCGAAGAACGTGCATAGGTACCCAGCCCTGGCCTCCTCTCCTCC TGCTGCCGGGCAACGTCTGCAAGTATCAATCAGGCAGGGTCGGATGGACC ATGCTCGCCGTGTCCAAAGCCGTCTCACCACAAGACACCACCGCCGCTCC GATTGCCTCCTGTTAACACGCGCAGACCCTTCCCAGAGGCAGGCAGGCAG GTGCCTTCGTGGTACTGAGTACCATATATAATTTGACTGGTTGGTGGGTA GAGGCAACTATCTGCCCAACGCAAGGCAGGGAAGGTTGAGGGGCCCCGTG ACACACGGATATTGGCACCATCCACGCGCGTGTCCCCCATAGATCGCACA TACCAGTATTGTCACCAAGTACCCCTATGTATTACATGAAAACACCAAAC ATCCGCGTTGCGTTTCGTGTTGTTTTCGTCGCAGTCTCCGGACCTGTTCA AGTCCGGGAAGCTCGACGGCCCCACTCTCCACGCGGTCTTCTACTTCACG CTCAAGGAAGAGACGGCGAAAGCTCTCCAGGACCTCGGGTCGGCGGAGCC TTCGGTTCGGCTGCTTGCGGAGTATTTCAGGTTTGGTCGCCGCCTTTTCT TCATCGAGTGTTTCTGGTAGTCGGGCGGGGGGGGGGGGGCTGGAAGGGTT AACTCAATTCCCTGTATAAATACGAAGTATTGGCGGGTGAGACCAGCAGA GGGGGGTGATATGTGTCCACACACATCTGCCCACGACCCACAACCCCCCC CAAAAGAATCCACGTAGCCCCTAAAGATCCCACCGATAGTGTCCAGTGGC CGTGTACCATCTAACAGGGTATCTGGTCAGGGTTGTCCGAACATGATACA TGCGGATCCCTATTGCGCACCATAAAATATACGGCCCAAGCTCCGGAAGG GGTGAGGTCAGTGGCGTTTGGCTTGTGTGGGATCGCCAGGTGTGCAAGGC AAAACGTTGGCCAATAGGAAGCAGATTGTTCCGAAACCAGGTTCGTTTTT TTTCTCTTTCTTTTTTCTTCTCCACAATTTTTTCCAGTCCTCGATGGGCT CCCTGTCACGAGGACATCTTGCCTAGAGTACTGAACCGTGGTCACAGAGA AGGGTTCCTTTCCCCAAGGCCCCCACCCCCCTCCCCCGTCTGCGGTGCTT GCCTAAGATTTTTGTCGCGAGAAGGGTTCAGATTCGCAGACTAATTATTT AGTGCACATAGGGTATGGGCACGATCGAAGACCGCACCATGGCTCCTGTG AGCGGTTCCTATGACGAACCGATGGGAAAGCGGAACATCACGTCAGCGTC AGTTGCGAACACCACCTCGCCCGTTGTGGGTAGTTCCTACACGACGGCGA ACCGATGACAGCGAAGCGATTGTATCGGCACCCGCAGCTAAGAGCTCAAT TCAAATACCCCAACGATTGCATCGGCACCCGCAGCGAACAGCTCAATTCA AATACGCCAAACGATTGCATCGGCGCCCGCAGCTATCAGCTCAATTCAAA TACGCAACGACTGCATCGGCACCCGCAGCTAGGAGCTCATTTCAAAAAGC ACGCAACGATTTTGCACGGCACCAGTGTATTTAGCCACATAAATAGCATC CAAACGAAACACCGCCGTCGCGGCGAAACAGGCGAGCCGAATCGGAGCCG GCGATGAGGAGCCGTTTCAAAGCGATCGCCGTCGTAAACAACCAGGAGGT GATCAACATGGCCCGCTTAATATCGCCTTTCAACGGCAAGCCCGTCCTCA TCACCGAGTCGGGATCGCTGGCACGGGGAGCCCGAAAAGCAAGCGCAGCG GCAGCAGGAGCCGGAGAAGGGGCCCCGGCAGATGGGCCCCCCGATTCAGT CCCCGTGGTGGGAGGCAGTGGAGGGGGCAATGGTAGTGGCAGCGACGGTG GCGGTAGCAGTGGTAGAAGCGGCGGTAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCACCTTCGGCGCGGACGAATTTTTAGAGCTGGACGTTCACGTACG ACGATGGAACTTCATGGCGCGCAAGGGCCTCAACAAGCTCACCCCGAAGT TCGGGCTGATCAACGTCAGTGTCGCCTTTCTGATAGAGGGGAGGGAGGAT GCGGAGGTACGGCGAGAATGGAGCTGATTGCCGTGCCGCTTGCTTGCCGC ACGAGGCGTTAGGATGCGTCCCCAGGAGCCGCAGATGTACTTTGGGGTAT TTTGCGTTTTTCTGTCATCCCTGTCGCGTGCGTTGATGTTGTTGCGGTAT GTGTGTTTCGTTTTGAGCGGGCTAGTTGGGGTGCACACATGGACAGGTGC TTTGGAGCCGGCGGCGCCGGATCTGTCTTTGTTGTTTTCGATTTTTGAAA ACTTTCGCTGGTTGCGGCTTCGTCCGGCCGAAGTCGTGACGCTTGACATT GCTCCAGTGTTTGCCCCCCTAGGATGCCATGGTAGACACACCCCTTGTGG CCGTCTCCAACGTCTTCGTATCATTCGCATGGTTCTTAAAGCCGCTACAG AGTAGTGAACAGCGGGAACGATTTCACGTACGTAGCAAACACAGCCAAGG TTATCGATGCAATAATAGTGTTGTGTGGAGATCGACAGCAGGTCCGTGTA CTTCTGTGGTGACACGGGTGCAGCCACAAGCATCGACCCAGGGACCCCCA GAAGGCTGCAAACCCCTCCCCTCTTGACCCCCCTTCGTCATCGCGACGGT ATTTTCTGCTACCACCGTGTTATCTGTTCTCGTTTGTGCCGCTATTTATC GCCATGTCTTGCTGATGTTTATGTTTTTGCAACGGCGCACGGAACCCCCC CCCCCCCTCCCCTCCCCTCCCACCCGTAAAATATTCGCGTCTCATGATTC CCACCCCTGGCCCCTTCTTTACCCTCTCAAATTTGTTTTTTGTTTGCAGC TTCCAGAGCAAGTTCTGGGATGCGCAACGGCAAACTGTTTCGATATCTCC AAGGCAAGGGACATCAGCGCCGCATGACGCCGCCGCAACTCTTGTTGTAC GCGAGAGCTTGACTCCTGTGGGCGTCGGATTTGACGGCGCCCGCTGGGAG TGTTGGCACCACCAACCACCTCTATTTTTTGTGCACGTGCACGCTTACGT TTTTATGAAAAAGGTTTGTCTATGCTTGCTTTCTCTGTCCTTTCTCCCTT GCTTCTCGGGCGGGCGGGCGGTGGACCTAAACACATCATGTATGTACGTC GAGTGGCGTCGCCCCTCTGAGCTGTTTCGCCGCCGAGCCTTGTTATGTAG AGGCAGCGATTAGCAGGCTGTGGCAGGCGGGCAGGCAGGCAGAGGCAGCG ATGAGCAGGCAGACACGCA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5074:4963..9631-

>mRNA_L-elsbetiae_contig5074.13103.1 ID=mRNA_L-elsbetiae_contig5074.13103.1|Name=mRNA_L-elsbetiae_contig5074.13103.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2028bp|location=Sequence derived from alignment at L-elsbetiae_contig5074:4963..9631- (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGGTCGTCGGAGCCACGGTAACGCACGCCGACTGCTCCTCAGCAGA
CGGCGTGGGCATGCCGCCGCACAGCTGGTCCCAGGTCGATCCGAGCAAGT
TCATGGTGCGTCAGGGACCGAACTATTCCAAGCACAAGCGGAAGGATAGA
AACGCCGGGGGTTCGTGCTACGAGCTCCGCGCGATGGACTGGTACAAGGC
TGGTCAGAAGGTGGACGGGGTGGCCAAGCTGGCTGCAGCAGCGCTTCCCG
AGGCGAAGTTCAGCCACCCATCTGTGCCTTCGTTGCTGGTGGTAAACGTG
CAGTTGCCGACTGAGATGGAGGTCGTCGGAGCCACGGTAACGCACGCCGA
CTGCTCCTCAGCAGACGGCGTGGGCATGCCGCCGCACAGCTGGTCCCAGG
TCGATCCGAGCAAGTTCATGGTGCGTCAGGGACCGAACTATTCCAAGCAC
AAGCGGAAGGATAGAAACGCCGGGGGTTCGTGCTACGAGCTCCGCGCGAT
GGACTGGTACAAGGCTGGTCAGAAGGTGGACGGGGTGGCCAAGCTGGCTG
CAGCAGCGCTTCCCGAGGCGAAGTTCAGCCACCCATCTGTGCCTTCGTTG
CTGGTGGTAAACGTGCAGTTGCCGACTGAGTCTCCGGACCTGTTCAAGTC
CGGGAAGCTCGACGGCCCCACTCTCCACGCGGTCTTCTACTTCACGCTCA
AGGAAGAGACGGCGAAAGCTCTCCAGGACCTCGGGTCGGCGGAGCCTTCG
GTTCGGCTGCTTGCGGAGTATTTCAGTCTCCGGACCTGTTCAAGTCCGGG
AAGCTCGACGGCCCCACTCTCCACGCGGTCTTCTACTTCACGCTCAAGGA
AGAGACGGCGAAAGCTCTCCAGGACCTCGGGTCGGCGGAGCCTTCGGTTC
GGCTGCTTGCGGAGTATTTCAGGCGAGCCGAATCGGAGCCGGCGATGAGG
AGCCGTTTCAAAGCGATCGCCGTCGTAAACAACCAGGAGGTGATCAACAT
GGCCCGCTTAATATCGCCTTTCAACGGCAAGCCCGTCCTCATCACCGAGT
CGGGATCGCTGGCACGGGGAGCCCGAAAAGCAAGCGCAGCGGCAGCAGGA
GCCGGAGAAGGGGCCCCGGCAGATGGGCCCCCCGATTCAGTCCCCGTGGT
GGGAGGCAGTGGAGGGGGCAATGGTAGTGGCAGCGACGGTGGCGGTAGCA
GTGGTAGAAGCGGCGGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACC
TTCGGCGCGGACGAATTTTTAGAGCTGGACGTTCACGTACGACGATGGAA
CTTCATGGCGCGCAAGGGCCTCAACAAGCTCACCCCGAAGTTCGGGCTGA
TCAACGTCAGTGTCGCCTTTCTGATAGAGGGGAGGGAGGATGCGGAGGCG
AGCCGAATCGGAGCCGGCGATGAGGAGCCGTTTCAAAGCGATCGCCGTCG
TAAACAACCAGGAGGTGATCAACATGGCCCGCTTAATATCGCCTTTCAAC
GGCAAGCCCGTCCTCATCACCGAGTCGGGATCGCTGGCACGGGGAGCCCG
AAAAGCAAGCGCAGCGGCAGCAGGAGCCGGAGAAGGGGCCCCGGCAGATG
GGCCCCCCGATTCAGTCCCCGTGGTGGGAGGCAGTGGAGGGGGCAATGGT
AGTGGCAGCGACGGTGGCGGTAGCAGTGGTAGAAGCGGCGGTAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCACCTTCGGCGCGGACGAATTTTTAGAGC
TGGACGTTCACGTACGACGATGGAACTTCATGGCGCGCAAGGGCCTCAAC
AAGCTCACCCCGAAGTTCGGGCTGATCAACGTCAGTGTCGCCTTTCTGAT
AGAGGGGAGGGAGGATGCGGAGCTTCCAGAGCAAGTTCTGGGATGCGCAA
CGGCAAACTGTTTCGATATCTCCAAGGCAAGGGACATCAGCGCCGCATGA
CTTCCAGAGCAAGTTCTGGGATGCGCAACGGCAAACTGTTTCGATATCTC
CAAGGCAAGGGACATCAGCGCCGCATGA
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