mRNA_L-elsbetiae_contig506.13094.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig506.13094.1 vs. uniprot
Match: D7G2J0_ECTSI (Cysteine protease n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2J0_ECTSI) HSP 1 Score: 258 bits (659), Expect = 2.820e-78 Identity = 135/146 (92.47%), Postives = 138/146 (94.52%), Query Frame = 2 Query: 227 LLETLRVPQSLGFLGGRPNHAIFFIGAQGETLFGLDPHTTQAAPDMGEGFPSERYVHSLHCQSAVSMGVHRVDPSLALAFYLPDRAAFQDLVKRIGETKSPPFSVEQTRPDYEGEMGLAFMINQRDXXXXXXXXXXEYVFVKGPER 664 LLETLRVPQSLGFLGGRPNHAIFFIGAQG TL GLDPHTTQ A DMGEGFPSERYVHSLHCQSAVSM VHR+DPSLALAFYLPDRA F+DL+KRIGET PPFSVEQTRPDYEGEMGLAFMINQRDXXXXXXXXXXEYVFVKGPER Sbjct: 401 LLETLRVPQSLGFLGGRPNHAIFFIGAQGNTLTGLDPHTTQPAADMGEGFPSERYVHSLHCQSAVSMDVHRIDPSLALAFYLPDRATFEDLIKRIGETNPPPFSVEQTRPDYEGEMGLAFMINQRDXXXXXXXXXXEYVFVKGPER 546
BLAST of mRNA_L-elsbetiae_contig506.13094.1 vs. uniprot
Match: A0A7S2FNY0_9STRA (Cysteine protease n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FNY0_9STRA) HSP 1 Score: 118 bits (296), Expect = 6.240e-29 Identity = 54/118 (45.76%), Postives = 78/118 (66.10%), Query Frame = 2 Query: 227 LLETLRVPQSLGFLGGRPNHAIFFIGAQGETLFGLDPHTTQAAPDMGEGFPSERYVHSLHCQSAVSMGVHRVDPSLALAFYLPDRAAFQDLVKRIGE-----TKSPPFSVEQTRPDYE 565 LL L +PQ++G LGGRPNHAI+F+G +G L GLDPHTTQ P + FPS+ ++ S+ S +M +H +DPS+A+AFY DRA FQDL R+ + + + P +V ++ P Y+ Sbjct: 9 LLHLLEIPQTMGILGGRPNHAIYFVGHEGNLLHGLDPHTTQPTPPLDSTFPSDDHLRSMKTDSPQTMDIHHIDPSIAVAFYCKDRADFQDLCGRLRDMSVEFSSTAPVTVAESAPRYD 126
BLAST of mRNA_L-elsbetiae_contig506.13094.1 vs. uniprot
Match: A0A7S2S9E2_9STRA (Cysteine protease n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S9E2_9STRA) HSP 1 Score: 101 bits (252), Expect = 6.140e-22 Identity = 53/115 (46.09%), Postives = 70/115 (60.87%), Query Frame = 2 Query: 227 LLETLRVPQSLGFLGGRPNHAIFFIGAQGETLFGLDPHTTQAAPDM-GEGFPSERYVHSLHCQSAVSMGVHRVDPSLALAFYL---PDRAAFQDLVKRIGETKSP-PFSVEQTRP 556 +L L +PQS+GF+GGRPNHAI+F G G L GLDPHTTQ P++ E FPS ++ SL C + V R+DPSLAL FY D + + ++ + + P PF VE T P Sbjct: 60 ILAMLELPQSIGFIGGRPNHAIYFFGHHGNELHGLDPHTTQPTPEVEDEEFPSLEFLASLSCPRPQKLRVDRLDPSLALGFYFRSWEDLNQWHECIEEMAKDGGPMPFRVEMTTP 174
BLAST of mRNA_L-elsbetiae_contig506.13094.1 vs. uniprot
Match: A0A7S2SA43_9STRA (Cysteine protease n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SA43_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.440e-20 Identity = 53/115 (46.09%), Postives = 70/115 (60.87%), Query Frame = 2 Query: 227 LLETLRVPQSLGFLGGRPNHAIFFIGAQGETLFGLDPHTTQAAPDM-GEGFPSERYVHSLHCQSAVSMGVHRVDPSLALAFYL---PDRAAFQDLVKRIGETKSP-PFSVEQTRP 556 +L L +PQS+GF+GGRPNHAI+F G G L GLDPHTTQ P++ E FPS ++ SL C + V R+DPSLAL FY D + + ++ + + P PF VE T P Sbjct: 369 ILAMLELPQSIGFIGGRPNHAIYFFGHHGNELHGLDPHTTQPTPEVEDEEFPSLEFLASLSCPRPQKLRVDRLDPSLALGFYFRSWEDLNQWHECIEEMAKDGGPMPFRVEMTTP 483
BLAST of mRNA_L-elsbetiae_contig506.13094.1 vs. uniprot
Match: A0A7S4DH17_9EUKA (Cysteine protease n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DH17_9EUKA) HSP 1 Score: 99.0 bits (245), Expect = 2.410e-19 Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 2 Query: 221 QGLLETLRVPQSLGFLGGRPNHAIFFIGAQGETLFGLDPHTTQAAPDMGEGFPSERYVHSLHCQSAVSMGVHRVDPSLALAFYLPDRA---AFQDLVKRIGETKSPPFSVEQTRPDYEG 568 +GL L++PQSLGF+GGRP +++FIG Q ++L LDPHT Q + E ++ + HC +M +DPSLAL FY DR+ AF D V+ IG + PPF P+YEG Sbjct: 304 EGLRRCLKLPQSLGFVGGRPRSSLYFIGYQADSLMYLDPHTIQKVRPLREKIQTDS--STFHCNRIRTMQFRELDPSLALGFYCRDRSDFSAFWDAVQSIGGLRFPPFRTAMVTPNYEG 420
BLAST of mRNA_L-elsbetiae_contig506.13094.1 vs. uniprot
Match: UPI001C46FD56 (cysteine protease ATG4B-like n=1 Tax=Homarus americanus TaxID=6706 RepID=UPI001C46FD56) HSP 1 Score: 97.1 bits (240), Expect = 2.590e-19 Identity = 57/138 (41.30%), Postives = 72/138 (52.17%), Query Frame = 2 Query: 212 ILSQGLLETLRVPQSLGFLGGRPNHAIFFIGAQGETLFGLDPHTTQAAPDMGEGFPSERYV--HSLHCQSAVSMGVHRVDPSLALAFYLPDRAAFQDLVKR-----IGETKSPPFSVEQTRPDY-------EGEMGLA 583 I GL + ++PQSLG +GG+PNHA +FIG G+ L LDPHTTQ A + + E S HC A M ++DPSLAL FY F DL R I K+P F + TRPDY EG G++ Sbjct: 165 IYFSGLKKCFKMPQSLGLIGGKPNHASYFIGFMGDELVFLDPHTTQDAGSIAKKLTEEEVELDKSYHCSYAQRMPFEQLDPSLALCFYCGTEKEFDDLCNRMRQELIDAEKTPLFELVPTRPDYMKDDSSFEGASGIS 302
BLAST of mRNA_L-elsbetiae_contig506.13094.1 vs. uniprot
Match: UPI001E67819B (cysteine protease ATG4B-like isoform X1 n=2 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E67819B) HSP 1 Score: 97.1 bits (240), Expect = 6.700e-19 Identity = 55/124 (44.35%), Postives = 66/124 (53.23%), Query Frame = 2 Query: 212 ILSQGLLETLRVPQSLGFLGGRPNHAIFFIGAQGETLFGLDPHTTQAAPDMGEGFPSERYV--HSLHCQSAVSMGVHRVDPSLALAFYLPDRAAFQDLVKR-----IGETKSPPFSVEQTRPDY 562 I GL + ++PQSLG +GG+PNHA +FIG G+ L LDPHTTQ A G+ E S HC A M +DPSLAL FY F DL R I K+P F + TRPDY Sbjct: 247 IYFSGLKKCFKMPQSLGLIGGKPNHASYFIGFMGDELVFLDPHTTQEAGSTGKKRTEEEVELDKSYHCPYAQRMPFEHLDPSLALCFYCGSEKEFDDLCNRMRQELIDAEKTPLFELVPTRPDY 370
BLAST of mRNA_L-elsbetiae_contig506.13094.1 vs. uniprot
Match: D4AH85_HAELO (Cysteine protease n=1 Tax=Haemaphysalis longicornis TaxID=44386 RepID=D4AH85_HAELO) HSP 1 Score: 95.9 bits (237), Expect = 1.470e-18 Identity = 51/116 (43.97%), Postives = 67/116 (57.76%), Query Frame = 2 Query: 224 GLLETLRVPQSLGFLGGRPNHAIFFIGAQGETLFGLDPHTTQAAPDMGEGFPSERYVHSLHCQSAVSMGVHRVDPSLALAFYLPDRAAFQ---DLVKR--IGETKSPPFSVEQTRP 556 GL T + QSLG +GG+PNHA++ IG G+ L LDPHTTQ A D+ FP + S HC A M + ++DPS+AL FYLP A F +L + I E P F + + RP Sbjct: 234 GLKRTFALKQSLGIIGGKPNHALYIIGVVGDDLVFLDPHTTQLAVDLDTEFPDDE---SYHCAHASRMDIGQLDPSIALCFYLPTEAEFDSWCNLAHKHLISEMSQPLFEITEHRP 346
BLAST of mRNA_L-elsbetiae_contig506.13094.1 vs. uniprot
Match: T0PWJ2_SAPDV (Cysteine protease n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PWJ2_SAPDV) HSP 1 Score: 95.5 bits (236), Expect = 2.070e-18 Identity = 46/144 (31.94%), Postives = 75/144 (52.08%), Query Frame = 2 Query: 227 LLETLRVPQSLGFLGGRPNHAIFFIGAQGETLFGLDPHTTQAAPDMGEGFPSERYVHSLHCQSAVSMGVHRVDPSLALAFYLPDRAAFQDLVKRIGET---KSPPFSVEQTRPDYEGEMGLAFMINQRDXXXXXXXXXXEYVFV 649 L E +PQSLG +GG+ H+++F+GA+G LDPHT ++ FP+ + ++H + M V +DPSLA+ FY DRA + DL +R+ K+ P +V +PDY ++ L + + +YV + Sbjct: 247 LTEVFELPQSLGIIGGKRGHSVYFVGARGHQFHILDPHTVHPTTEVDASFPTATHARTVHSTDHLVMEVDYIDPSLAVGFYCRDRADYVDLCRRLAAMARGKTCPITVADAKPDYTNDVELHSVSGESTGGDNDLSDEDDYVLI 390
BLAST of mRNA_L-elsbetiae_contig506.13094.1 vs. uniprot
Match: A0A2R5GA20_9STRA (Cysteine protease n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GA20_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 2.670e-18 Identity = 51/119 (42.86%), Postives = 73/119 (61.34%), Query Frame = 2 Query: 227 LLETLRVPQSLGFLGGRPNHAIFFIGAQGETLFGLDPHTTQAAPDM----GEGFPSERYVHSLHCQSAVSMGVHRVDPSLALAFYLPDRAAFQDLVKRIGE--TKSPPF-SVEQTRPDY 562 L+ETL++PQ +G +GGRP H+++FIG+QG+ L LDPHT Q A + E FP + V++ HC S + +DPSLA+ FY+ DLV R+G+ T PF S ++RP Y Sbjct: 350 LIETLKLPQCVGMIGGRPAHSLYFIGSQGQDLLYLDPHTVQVAANEQECDNEFFPYQDTVNTYHCASPRVIPARAIDPSLAVGFYVNSPEELADLVARVGQFHTFGLPFVSFAESRPSY 468 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig506.13094.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig506.13094.1 >prot_L-elsbetiae_contig506.13094.1 ID=prot_L-elsbetiae_contig506.13094.1|Name=mRNA_L-elsbetiae_contig506.13094.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=192bp MYVRMYSHDPTFGPFLDFSLFCFFSPFSSSHQCSNRLLPRILSQGLLETLback to top mRNA from alignment at L-elsbetiae_contig506:36692..38760- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig506.13094.1 ID=mRNA_L-elsbetiae_contig506.13094.1|Name=mRNA_L-elsbetiae_contig506.13094.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2069bp|location=Sequence derived from alignment at L-elsbetiae_contig506:36692..38760- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig506:36692..38760- >mRNA_L-elsbetiae_contig506.13094.1 ID=mRNA_L-elsbetiae_contig506.13094.1|Name=mRNA_L-elsbetiae_contig506.13094.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1152bp|location=Sequence derived from alignment at L-elsbetiae_contig506:36692..38760- (Laminarionema elsbetiae ELsaHSoW15)back to top |