mRNA_L-elsbetiae_contig5033.13056.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5033.13056.1
Unique NamemRNA_L-elsbetiae_contig5033.13056.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 2.260e-115
Identity = 221/394 (56.09%), Postives = 248/394 (62.94%), Query Frame = 1
Query:    1 MVATQMFLGTAATLIASSAAFVAPMAVRSAA-PAASSSSLRMSAGSDYVATLPGAPFGDGK-----------------------------------------------------------------IFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVAEEYHPL-------FMGKEF------IGPAIEHFQEITAQFPEFWAFALLG-MAFVEY---NTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 933
            MVA+QMF+GTAATLIASS AFVAP+AVRS A    SSSSL MSAGSDYVATLPGAPF DGK                                                                 IFDPL +S+GA P DIKKWREAEIKHGRVAMLASLGV+VAE+  P        F+  E+      IG    +F         +    ++  +A  ++   N +V     P  ++   GA PG+IK WREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTI  A+  PS VTGEGGLKEDY PGDLGFDPL +KP  EA    M+TKELNNGRLAMIGIAGML QEL+NPADILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPVAVRSVAITTPSSSSLMMSAGSDYVATLPGAPFSDGKQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSD--GAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392          
BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 339 bits (869), Expect = 2.900e-108
Identity = 193/311 (62.06%), Postives = 206/311 (66.24%), Query Frame = 1
Query:    1 MVATQMFLGTAATLIASSAAFVAPMAVRSAAPAASSSSLRMSAGSDYVATLPGAPFGDGKIFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVAEEYHPLFMGKEFIGPAIEHFQEITAQFPEFWAFALLGMAFVEYNTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 933
            MVATQ+FLG+AATLIASS AFVAPMAVRSAAPA+SSS+L+MSAGSDYVATLPGAPFGDGKIFDPLN+S+GA+P DIKKWREAEIKHGRVAMLASLGVLVAE+YHPLFMG                                                                                           PDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTI  A+  PS VTGEGGLKEDY PGDLGFDPL +KP+ EA    M+TKELNNGRLAMIGIAGMLVQELINPADILG
Sbjct:    1 MVATQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMG-------------------------------------------------------------------------------------------PDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220          
BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 335 bits (859), Expect = 9.200e-107
Identity = 186/307 (60.59%), Postives = 204/307 (66.45%), Query Frame = 1
Query:   13 QMFLGTAATLIASSAAFVAPMAVRSAAPAASSSSLRMSAGSDYVATLPGAPFGDGKIFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVAEEYHPLFMGKEFIGPAIEHFQEITAQFPEFWAFALLGMAFVEYNTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 933
             MFLGTAATLIASS AFVAPMAVRSAAPA+S+S+L+MSAGSDYVATLPGAPFGDGKIFDPL +S+GA                                                                                           EPGEIKLWREAEIKHGRVAMLA++GV+VAE+YHP FMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTITKAYA+PS VTGEGGL+++YSPGDLGFDPL +KPK +A    MQTKELNNGRLAMIGIAGMLVQEL+NPADILG
Sbjct:    6 NMFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGA-------------------------------------------------------------------------------------------EPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221          
BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 2.650e-99
Identity = 181/310 (58.39%), Postives = 201/310 (64.84%), Query Frame = 1
Query:    1 MVATQMFLGTAATLIASSAAFVAPMAVRSAAPAASSSSLRMSAGSDYVATLPGAPFGDGKIFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVAEEYHPLFMGKEFIGPAIEHFQEITAQFPEFWAFALLGMAFVEYNTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADIL 930
            MVA+QMFLGTAA LIASS AFVAP+AVRSAAPA+++S+L+MSAGSDYVATLPGAPF DGKIFDPL++S+GA P DIKKWREAEIKHGRVAMLASLG+LVAEEYHPLFMGK+FIGPAI HFQEI+AQFPEFWAF+LLGMAF+EYNTI+TAF +PSAVTGEGG                                                                                           LKEDY PGDLGFDPL +KP  EA    M+TKELNNGRLAMIGIAGML QEL+N  DIL
Sbjct:    1 MVASQMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGG-------------------------------------------------------------------------------------------LKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219          
BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 5.230e-92
Identity = 169/307 (55.05%), Postives = 195/307 (63.52%), Query Frame = 1
Query:   13 QMFLGTAATLIASSAAFVAPMAVRSAAPAASSSSLRMSAGSDYVATLPGAPFGDGKIFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVAEEYHPLFMGKEFIGPAIEHFQEITAQFPEFWAFALLGMAFVEYNTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 933
             MFLGTAATLIASSAAFV PMAVRSAAPA+S+S+L+MSAG+DY+ATLPGA   +GKIFD L +++GA                                                                                           +PGEIKLWREAEIKHGRVAMLA++GV+VAE+YHPFFMGPDYIGPAVDHFQEI+A++P+FW +SLLGMAFIEYNTI KAYA+PS VTGEGGL+++YSPGDLGFDP  IKPK +A    MQ KELNNGRLAMIGI GMLVQEL+N  DILG
Sbjct:    6 NMFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGA-------------------------------------------------------------------------------------------DPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218          
BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 2.840e-79
Identity = 128/168 (76.19%), Postives = 140/168 (83.33%), Query Frame = 1
Query:  430 NTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 933
            N +V     P  ++   GA PG+IK WREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAF+EYNTI  A+  PS VTGEGGLKEDY PGDLGFDPL +KP  EA    M+TKELNNGRLAMIGIAGML QEL+NPADILG
Sbjct:   31 NALVPQIFDPLGLSD--GAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196          
BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 2.270e-78
Identity = 124/150 (82.67%), Postives = 136/150 (90.67%), Query Frame = 1
Query:  481 GAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADIL 930
            GAE G+IKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISA++PEFW FSLL +A IEYNTITKAYA+PS VTGEGGL+++YSPGDLGFDPL +KP  +    TMQTKELNNGRLAMIGIAG LVQEL+NP +IL
Sbjct:   25 GAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174          
BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 1.590e-74
Identity = 157/311 (50.48%), Postives = 170/311 (54.66%), Query Frame = 1
Query:    1 MVATQMFLGTAATLIASSAAFVAPMAVRSAAPAASSSSLRMSAGSDYVATLPGAPFGDGKIFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVAEEYHPLFMGKEFIGPAIEHFQEITAQFPEFWAFALLGMAFVEYNTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 933
            MVA+QMF+GTAATLIASS AFVAPMAVRS     SS  L+MSAGSDYVATLPGAPF DGKIFDPL +S+GA P DIKKWREAEIKHGRVAMLASLGV+VAE                            FWAF+LLGMAF+EYNTI+TAF +PSAVTGEGG                                                                                           LKEDY PGDLGFDPL +KP  EA    M+TKELNNGRLAMIGIAGML QEL+NPADILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGG-------------------------------------------------------------------------------------------LKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192          
BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 7.040e-64
Identity = 132/309 (42.72%), Postives = 169/309 (54.69%), Query Frame = 1
Query:   10 TQMFLGTAATLIASSAAFVAPMAVR-SAAPAASSSSLRMSAGSDYVATLPGAPFGDGKIFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVAEEYHPLFMGKEFIGPAIEHFQEITAQFPEFWAFALLGMAFVEYNTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 933
            T   +G A+   AS  AF+ P     SA P  +S++ RMSAGSDYV+TLPGAPF DGK++DP+ +S  A+P+DIKKWREAEIKHGRVAMLAS+GVLVAE +HPLF+G                                                                                           PDYIGPA+ HF+EI+A++P+FW  +LL +A++EY  I   +A+   VTGEGG++ DY PGDLGFDPLG+ P+ E +   M+TKELN+GRLAMIGI GM+VQEL+ P  I G
Sbjct:   56 TGALVGMASWCFASCEAFIVPTPTTLSARP--TSTAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLG-------------------------------------------------------------------------------------------PDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271          
BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 7.460e-60
Identity = 135/315 (42.86%), Postives = 171/315 (54.29%), Query Frame = 1
Query:    1 MVATQMFLGTAATLIASSAAFVAPMAV--RSAAPAASSSSLRMSAGSDYVATLPGAPFG---DGKIFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVAEEYHPLFMGKEFIGPAIEHFQEITAQFPEFWAFALLGMAFVEYNTIVTAFASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGEGGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLVQELINPADIL 930
            MV +Q+FLGTAATLIASSAAFVAP+A    S A  A+SS+ +M+AGSDY A+LPGAPFG   +GK FDP  ++   +P+ IKKWREAE+KHGRV+MLA++G+LV+E +HPLFMG                                                                                           P YIGPAV+H Q+I+  YP FWV SL  +AFIE  TI  A+   S VTG G LK +Y PGDLGFDPLG+ PK   DF  +Q++EL+ GR AMIG+ GM+VQE+++   IL
Sbjct:    1 MVTSQLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMG-------------------------------------------------------------------------------------------PAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5033.13056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWB4_9PHAE2.260e-11556.09LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G7Q6_ECTSI2.900e-10862.06Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI9.200e-10760.59Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI2.650e-9958.39Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S0_ECTSI5.230e-9255.05Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7S5_ECTSI2.840e-7976.19Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q7_ECTSI2.270e-7882.67Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE1.590e-7450.48LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G5B4_ECTSI7.040e-6442.72Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7FQG7_ECTSI7.460e-6042.86Light harvesting complex protein n=2 Tax=Ectocarpu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5033contigL-elsbetiae_contig5033:3184..12168 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score342.4
Seed ortholog evalue2.2e-91
Seed eggNOG ortholog2880.D7G7Q6
KEGG koko:K08914
KEGG Pathwayko00196,ko01100,map00196,map01100
Hectar predicted targeting categorychloroplast
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2BEWM@1,2S15M@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Exons7
Model size2386
Cds size936
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5033.13056.1prot_L-elsbetiae_contig5033.13056.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5033 4634..12168 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816508.3802724-UTR-L-elsbetiae_contig5033:3183..46331622816508.3802724-UTR-L-elsbetiae_contig5033:3183..4633Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5033 3184..4633 -
1691683610.3727202-UTR-L-elsbetiae_contig5033:3183..46331691683610.3727202-UTR-L-elsbetiae_contig5033:3183..4633Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5033 3184..4633 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816508.3901024-CDS-L-elsbetiae_contig5033:4633..49091622816508.3901024-CDS-L-elsbetiae_contig5033:4633..4909Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5033 4634..4909 -
1691683610.3916903-CDS-L-elsbetiae_contig5033:4633..49091691683610.3916903-CDS-L-elsbetiae_contig5033:4633..4909Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5033 4634..4909 -
1622816508.4036596-CDS-L-elsbetiae_contig5033:5793..58771622816508.4036596-CDS-L-elsbetiae_contig5033:5793..5877Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5033 5794..5877 -
1691683610.4031773-CDS-L-elsbetiae_contig5033:5793..58771691683610.4031773-CDS-L-elsbetiae_contig5033:5793..5877Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5033 5794..5877 -
1622816508.4198976-CDS-L-elsbetiae_contig5033:6720..68141622816508.4198976-CDS-L-elsbetiae_contig5033:6720..6814Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5033 6721..6814 -
1691683610.4169679-CDS-L-elsbetiae_contig5033:6720..68141691683610.4169679-CDS-L-elsbetiae_contig5033:6720..6814Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5033 6721..6814 -
1622816508.4332986-CDS-L-elsbetiae_contig5033:9852..99471622816508.4332986-CDS-L-elsbetiae_contig5033:9852..9947Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5033 9853..9947 -
1691683610.4297075-CDS-L-elsbetiae_contig5033:9852..99471691683610.4297075-CDS-L-elsbetiae_contig5033:9852..9947Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5033 9853..9947 -
1622816508.4438717-CDS-L-elsbetiae_contig5033:10401..104851622816508.4438717-CDS-L-elsbetiae_contig5033:10401..10485Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5033 10402..10485 -
1691683610.440469-CDS-L-elsbetiae_contig5033:10401..104851691683610.440469-CDS-L-elsbetiae_contig5033:10401..10485Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5033 10402..10485 -
1622816508.4545054-CDS-L-elsbetiae_contig5033:11317..114401622816508.4545054-CDS-L-elsbetiae_contig5033:11317..11440Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5033 11318..11440 -
1691683610.4498568-CDS-L-elsbetiae_contig5033:11317..114401691683610.4498568-CDS-L-elsbetiae_contig5033:11317..11440Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5033 11318..11440 -
1622816508.4678605-CDS-L-elsbetiae_contig5033:11988..121681622816508.4678605-CDS-L-elsbetiae_contig5033:11988..12168Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5033 11989..12168 -
1691683610.459941-CDS-L-elsbetiae_contig5033:11988..121681691683610.459941-CDS-L-elsbetiae_contig5033:11988..12168Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5033 11989..12168 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5033.13056.1

>prot_L-elsbetiae_contig5033.13056.1 ID=prot_L-elsbetiae_contig5033.13056.1|Name=mRNA_L-elsbetiae_contig5033.13056.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=312bp
MVATQMFLGTAATLIASSAAFVAPMAVRSAAPAASSSSLRMSAGSDYVAT
LPGAPFGDGKIFDPLNMSEGANPKDIKKWREAEIKHGRVAMLASLGVLVA
EEYHPLFMGKEFIGPAIEHFQEITAQFPEFWAFALLGMAFVEYNTIVTAF
ASPSAVTGEGGAEPGEIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMG
PDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITKAYAKPSEVTGE
GGLKEDYSPGDLGFDPLGIKPKTEADFVTMQTKELNNGRLAMIGIAGMLV
QELINPADILG*
back to top

mRNA from alignment at L-elsbetiae_contig5033:3184..12168-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5033.13056.1 ID=mRNA_L-elsbetiae_contig5033.13056.1|Name=mRNA_L-elsbetiae_contig5033.13056.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8985bp|location=Sequence derived from alignment at L-elsbetiae_contig5033:3184..12168- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTCGCCACCCAGATGTTCCTCGGCACCGCCGCCACCCTCATCGCCTC GTCTGCGGCTTTCGTCGCCCCGATGGCCGTGCGGTCTGCGGCGCCCGCAG CGTCCTCGTCGAGCCTCAGGATGAGCGCCGGATCTGACTACGTTGCAACC CTTCCCGGTGCTCCGTTCGGCGACGGAAAGGTGATGCACACAGATTAGAA TGCCATGCCAGTTGTAGTGCTTGTGGCGTGTTGGTGCGTTTTTTCCCAAC GGTTGTGAGTTGTGCGAATTGCCTTTTGGACACGTGTATCGTAAGAGCCA CCAATATATAGAGACAGGTTTGTGGTTATGCTCGATGTGTGGTAGGATCC TTGGCTCTCCTTGATCGCTTTTACGCCACGTCTGTGATGTCGTGATCTCT TATCCACAGGGAGCGCCGCTGACTGGCTGATACCTTAATTCTCTCCTCGA ATCCTGGCGGAGTGATCATTTCCCGGTGTTATTTCTGACACATATTTGTT TTTCTTCAGCGTCACTCTCGAAGATCAATATTGCCCCCTTATACGAGTCT GTGAACTCGTCAGAGCTATCTGTGTCACGCTGGTGGCACCTGAACCGTGC TTACTGCCGTGGCCAGCGTAACAGTAGTTGTTGCTGTTGCTCTCACAAAA ACATCCAGGTCGTGAGCAAAATGACACACGCCACATGTCTGAGATTCCCC AATACCTCTTCCGTCTCGTGTTCTACAGATCTTCGATCCCCTCAACATGA GCGAAGGTGCCAACCCCAAGGACATCAAGAAGTGGCGCGAGGCCGAGATC AAGCACGGCCGTGTGGCCATGCTCGCATCGCTCGGTGTTCTCGTCGCAGA GGTAAGAGGCGCATGCATGTATACAGCAGCACTGAAAATACGAAGCAAGC GTGATCAAACACTTAACTTCCTAAAAAACGATCTCGACATCCGGACTTGA TGCACACCCATCTCCCCACTGGTGTCTGTACGATACGTAGTGTTAATAAA CACAGGAGTAGTAAAGGTGCACTAAAATTCCGTCACCATCCACTCGTCGC TCCTTCCATTTCGCCGCTTGAGTGAACGTGGTTGCCCTGGTCTTGAACTT GCGGGCAAGCTGAAAGCTGGTCACGGCGTGGTGCTCACTAGTATATATGC GGTCCGGCTTGTCCCAATTTTTGATGGGTTTCCAATTCGCTAAGTATACC AAGTATTCCGCGTGGTTCAGGACGTCACTACTGTACATAGCCGACATTTC AGGCTTCGATTATCCCATGCGGGTGTTGCTTTACGGAGGTTTCGAAGTAC CCCGTACTATTGCGCTGCCTCCGCCCACCGCGGCCATGCGCCACTGCTAC CATAAAAAAAACGACGATGGTACTGTGGCTGTGAGAGGGCTGAATATAGC CGCAGCTCGCTCGATGGCTGGCTATATCAAGATAATACGAAGCCTTTCGT TGGCACAACAGGAGATAACTTGAGCAACACAGTAGAGTAGTGTACCGTAG AATATACCACCCTCGTGCAGTACATGAACAGCTCGTGGACGCTCCCACGC GCATTGTGCTCCGTTCGCATCCGGAAGATCATACACATCCCGTTTCCGGC TCAGCTCTCGAAAACTGCCCGGCACCCCCCCTCACCCCGACCACCCCTCC CTATCCGCCGTGCCCTTTCTTTGTGTGACACAGGAGTACCACCCCCTGTT CATGGGGAAGGAGTTCATCGGCCCGGCCATCGAACACTTCCAGGAGATCA CCGCGCAGTTCCCCGAGGTGAGAACGAACCACTGGGTCTTTCCTCGTTTC CGCGGAGTAGTCGGGTGCGCCACCTGAAGAGTTGTTGCAGTCAAAACATT AAAAAGCGCGACCGCGGGTGGTCATGCCAAATTTCGATCGAATACCTCGC CCAAAATTATTGTCCGAGGTAGATAAATACGTATATAGTTACAGAGCTTA TTTTCTACACCGAACCCGCCCAGGAAGCATACAACCTACTATCGCGTATC GTAGCATGAACCGGAAATTATGCGAAAAGTAGATCGATCCTACGACTCCT CTCGTTGAACACTCTAGCCCAAGATTGACTGATGTTGTGCGTCTTGGCTG TTGCAACTTTGATTATCGACAACAGCAGAGATGCCACTGTCGCGCATCAC ACCGCCCACTGACCTTTTTTCGCGCCCTTTTCCTTCATCGCATGTCTCCC GCTGTTCTTTCTCGTGCTCAGTTCTGGGCGTTCGCCCTCCTGGGCATGGC CTTCGTCGAGTACAACACCATCGTGACGGCCTTCGCGTCGCCTAGCGCCG TGACCGGCGAGGGCGGCCTCAAGGAGGACTACAGCCCGGGAGACCTCGGC TTTGACCCCCTCGGCATCAAGCCCAAGACCCAGGCCGCCCTGGAGAAGAT GCAGACCAAGGAGCTCAACAACGGACGCTTGGCCATGATCGGCATCGCCG GCATGTTGGTGCAGGAGCTGCAAAACGGACAGGACATTTTGCCCAACTTT TTCTAAGTGATCAGGGCTCGGAAATCACTAATTTTGAAAAAAGTAGGAGT GCTTCGCGTATAGGCAAGCGATTACAGTTTACGTCGTCTGTTTCAACAAT CGGTCGGTGATTTGTACGATAGTTTCGTGTCTTCAATTGAGGACTGACTG TTCCCTGTGTATTCATGCAACATATGAGTTGCAAATTTTGCTTGATGCAT TCTCGCAGGGGGTTGCCCCCGCGATGCGTCATCTGTGTTTCGTGGTCGTT CGTGCGTTCATGTTGGCGTGACGAGGGTCTGGTGCTTTGGTTAGGTTACC GTGCCTGTCACAAGGATGAGATAAGAGATAGTATTGGTGCATTGGAGCTT TGCTGCATCGAAGACCTTGGCATTGCCAAGCTAAGGTCTTCCATGAACAA GAGTCCTATGCTAGACTTGACATTTCGGAAAAATGGTTTCTGTAATTTAT GTTAATCCACACGATTGCTGCGCCCGAGATGTATCATCGTCGAGCACTGT TGTAGCTTAAACGCGTCTTGGTGACAATGGACGAAGCACGTTCGCAAGCC TGGAGCTGGCTGTTGGCCATGTGTTCTCGTGTTCTGGTTTTCCCTACTTG CTCTATAGACCCATGTGACAACGAAATTTCCCCGCCGGAGAGTGGTGTTA CAAACGTCACAAACGTGTGCGGTATGTACTCTTGTCCGTAGACTCGAATA TGGCTCTGAGATCGCACGATTATCCTAGGTATGTGCGGACCCAGTTGCCC GCCAGACGATTGGGATTTTCGACTACCATCTACTTGTACTTTGACAAATG AAGATGCCACATCTACACGACGTCGAGGCAGCTAGCGGCTCCCTGTCTGT CCGCGAATCCGCCACTCTCCCACGAGTTGCACTTACAGACGAGTGAAGAC AACGGAAAACTCGACAGGGAAAAACAAATACGTTTCAAGGAACACGAAGA CATTACTTCACGACACCTTGTAGTAAGCACGCAGTCATGTCATTGACACT TAATTCCATGCTGACAAACGTGTAGACCGTTGGAACATATTTCAAGTAAG GCCGGACACCATCACGTGAGACTACTTGTCTACAATCCCTATCATTTGGC CCCAAATCGATTTCGGGGCCAAATGAAATACCTTTATGGGGCACCCGTTC TAAACTCGGGTCGAAAAGTTTGTTTTATGACTTGGGAACTTGGGGCCATA ATGTGGCCCCAAATGCTTTGTGGTCCTAAAGGGGTTAACGTAATAAGCAT GTGGTTTGGGAGAACGAAAACTCAACCATATCTACAATACAGCGTAAAAA GTAATCATCGAAGTCTCTAGAGACTGCATCAGTTCTTCGCAAACAAGTGC GAACACCCAATCGCGAATAAGATATATATCTGCAAGACGATCGCGAATAA GATATATATCTACAAGACGATGTTACTACATACAATGACGTTTTTCCTCT CCTCAGCCGAAAGCGCATGTCATGTTGTAGGCCATTATCGGCTAGACCTC CCGTCCTACATGGTCTCTACATTTCGCGTGCATGCATAGATACACATACA TGCACCCGAGCTCTATCTACTAGTACTTGCTGTTCGTTTTTTCGCTTTTT CGCCACTCTGTGGACGCAGCGTAAAAGATTGAGACAAAACTATATCAGCA ACCCAAAACTATTACATACATACCATATAAGAATAGAGTCTAGGTGGACC CCGTTGCTTACCGTAGATGACACAAGATACCACACCCCCTGGACCGAACT TTAGAGCTCTATTACTCCGTAACGAAGAAGGTGCCGGCACCAAGCAAAAC ATGTTTAGACAGCCCTCGACTAGATATTTCCATTGCCACCTCTTTCGGCA CTGGCACTCTTCTTGCTGAGGAGGAATCGAGCTTTGAAAGTATGTCCAGG GGGTGTGGTATCTTGTGTCACCTACCTACGGTATATTTTGTGTGCAGTAA GGGAACGGCGTGTGGTGGCGGAGAACACTGCTATCAATATGTACGAACGG CTGGTCCGCATGTCATCAAAAGTAGTGTATGCTGCGCGCGCTGGTTTGCC CAAGCACGCGCAACGGCGTAGTGGATCTCCGCGACTACGTGTATCTTTAT CTTGTATCTCGCCGGGCTGTTGGCGTGATCAGCCCTGCATCAGATTCCGT TCTGATTCAAGGAGTGACGTCAACCGTCAACTCAAGTGACGTTTGCTCAA CATACGTAGTAGATTTCTGCGTACCTCGTCGCATCCTTCCTCCCCATCAC CCCTCACAACTCACAACCCATCCCCAACCACACCTCCTACACACACTTGA GCAAGATGACTCTCGGCACCTCCACCCAGTTGTTCCTCGGCACCGCCGCC ACCCTCATCGCCTCGTCTGCGGCTTTCGTCGCCCCGATGGCCGTGCGATC CGCGGCACCCGCATCCTCGTCGAGCCTGAAGATGAGCGCTGGATCGGACT ACGTTGCAACCCTGCCCGGTGCTCCGTTCTCCGACGGAAAGGTGAGCGAT AGGTGCACGACCCTCTGTGCCTTTGATATGGTATAGTCTAAAGGTGTGCT GGCGGGGTTTCTCTATCTCGTTAGTTCGGTGGAGAGCAGCGGCTCTTTTG GTTGTCGTGCACGTGCACATCATGTAGTGAACACACGTCGACATGTTTGC TGACGTCCCATGCGCGTATGTGTGCCCCGAGTCCATATCAACGGTCGCGC ACCCAGCGGCTAGCACCTGTCCGCGGTAGCTGTTCGCTTACGCTTACATA CATAGTTTGCCCTGCCCAGGCGGCTCTTTGCTGATCCGTTTCCCCTGCTC GTGATCCTCACTTGCGCTGCTGCAGATCTTCGACCCCCTGGGCTTGTCCG ACGGTGCTGAACCTGGAGAGATCAAGCTGTGGCGCGAGGCCGAGATCAAG CACGGACGCGTGGCCATGCTCGCGTCGCTCGGGGTCCTTGTCGCCGAGGT GAGATGCAATGGCTCTCGGGTCGAGCTATCTGCGGTCTGAGGGAGGGCAG ATGTGTCTGGCATGTTCCTACATATTTGTTCTTGTCACGATTGGTGCTGA ATCTATACGATGACGCCGTGCACGAGTGGCCGGGAAACACGGCTGCAGCC GAGCGCTGCTTGCCCGATGCCACTTGTCCACGTAACTTGCTGTTGTGATT CATGTGCGGAGTCTTCGGCGAAATCAGCAGGCCCCAGCGTCTCTCTCACG GTGGCGCTCAAAAAATTCAACGGCGGAGTGTTTTTTCACCCCACACCCGC TCTATATTTTTTCCGATAGGTTCCAGGTGTGGTTCCCTCCCTTTTGTGTT CGGCGTGGAGGACGCACCGAGTGAGTGTGTGTGTGTGTGTGTGTGTGTTT GTGTGTGTGGTGTGTGTGTGCGAACGAGTTGGATGATTTTGCACCAGGCA AGAAAACGGCTATCTGTGATACCCGGCGGTCAGTATACGATCCGAGCTGG CTCATCTGATGACGTCACTCTTGCCGGTTAATTCGAGCTGGTTTTATTTG CTTTGGGCATGCCAGCAACTCACCCATGATGATCGTCACCGTGACGAAAC AAGCAAAGCAGCATCTATCCCTACCCTGCAGTTTCTAGCTCCTTTCTCCT TCCTGTAAATGAAGTGCACATTTGTCCCGAACCTGAGGGCGGGGTGTTGT TGGTTGGAGTGCATTTTGAGCTGCTACACTTTATGCATGTTTATATAAAC GTTTAAAGCTGTCACGAACCTGCCGTGCACCCATACCCAGCACTACTGCT GCTGCATCTCAATCCGTCTCCCTTTTAAATTCCTTCTGCAGGAGTACCAC CCGTTCTTCATGGGCCCCGACTACATCGGCCCCGCCGTGGACCACTTCCA GGAGATCTCCGCCCAGTATCCCGAGGTAAATTAGACTAATGGCGGGCTCT TGCGCAACTCCGCCGCGGGCCCCTTCAGAGTTGATACATTTCTGTATATA TACCAATAGCATTGCATGCCGAGATATTCATTATCGCGCACGCTCGAGCA TGTGTTTTGAGGCGAACGTGTTTTCTCTAATCCTGGAAGATATACACCGA TAAAAAAGACAACAGAGTGGGAGAGGGAGAGGGAGAGTCACCTCAAATGT AAATCTGCTGCCCCGGCCATCGTTCCGCGTGCCAACACGTGAACTCCTGC AAAACAACAAGGCTTTTCGTGAGTGGTGCCTGCTTTTTGCCCTCAAGTGA AATTTAGGTGTAATTTTGCCGCGAACCAAAAAATATGTACACATAAAACT AATCCCTCTATCGAGAAACTCCAGGGGGTCTGCTTGCTGCTTGAGCGACA TATCGAGTATAAACCGTCGAAACCCTATCGACAAGAACACTCAGAAACTC TTGTTGGAAGTGTTTCAGTTCTGCGCTGTTTGTGTAGCACGCACGTGTGG TGTAGGTTCGGCTACTCCGCTTGTGTACTTGCCTGGACATATGTTTATGC ATGGACTAATATTGTCCGTAGTATTTTTATTTTTCATTTTGATACCTGCA TATTAACCATGTTTCACATTGGCTCGCTGTGACAGATAGATGAACACGGA AATGGAGATAGCTGCGGCGGTTCTGCTCTCGACAGTGCATTTTCGCTGTT CAACCACACCACTGGTACCCTGACTGCGAAACATCGACTTTCTCCTGCGC CTGCTCTTTAGTGATTCTGAGACACTCCCTCCCATCGCCTAGCTTCCCCC ATCTCACCCTTTATGCCCCCTCCTCCTCCTCCTGACTTTCCTTAACGGAA CACACACAGTTCTGGGTATTCTCCCTCCTGGGCATGGCCTTCATCGAGTA CAACACCATCACCAAGGCGTACGCCAAGCCCAGTGAAGTGACCGGCGAGG GCGGCCTCAAGGAGGACTACAGCCCGGGAGACCTCGGCTTCGACCCCCTC GGCATCAAGCCCAAGACCGAGGCGGACTTCGTGACGATGCAGACCAAGGA GCTCAACAACGGCCGCCTAGCCATGATCGGCATCGCCGGAATGTTGGTGC AGGAGCTCATCAACCCGGCCGACATCCTCGGCTAATAGTTCGCACCGATA TAAATATCTTCCATCGTGGATGCAGAAACAAGCAGCTAGAATTCGGAATC GCTTCGATGGCTGGATTCATGTTCCTGAGTTTTGTGCAAATTAGTGTTGT GATGGTGCGGTAGGGAAAACGAATGACGAACGAGCATTATTGTACTGTAG CGCACGCACTTGTTCCTCGAGGGTAAATTGACTGATGGATGTTGATGGAG CGAGGAAAGGGCGGATGTGCATGATTTAGCTTTATTGTGTTTTGTGCCAT TTCGTGTTTTGAGAAGAATATCGTGCTTTTTTCCTGGTAGACGTTGCACG TCCTGAGGTTAGTGCGAAAATGGACTAGCCTAGCCCAGAGGCATTTTACT GAAGCAAATACCTCGAAGATGCAATTTTAGCTCACTCTGTTGCAGGAAGA GAAAGGGCACTGCGTGGTGTGGCTTGACGTTTATTGGCGGTTTCGTGGCG AGAGATGGATGTATATTTCGCTATTTGATCGCTTTCGAAGCGATGACGCG CCGAAGCGATGACGCGCCACCAGTAGGACAGTTGCAGTACCCCTGCCTGC CTGACTCTAGGCTGCGCGAGTCTGGTTTCGGCCGGGAGATTTTTGCGGGC GAGTCCGGCTTGCAATGGCTGTAGTACATCGACGAATTATTTGGACGCTT TACTTCTGGGGCTCAGGAAATGCATCCACTCAGGATCCAAGTCATTTTTA TTTCCACCACGTGGCTTGGTCTCGACCCCCGCGTACGATTTCTACTCTTC AGACCGAGAACAAAACGCCCTAGTCAAGCTGTACCCTGGCGCGAAGAGGC AAGCAAGTGACGAAATAGAACCAACCAAGACCCAAAACCATCAACTCTCT TCGTCACCTTTGCACCGGTCATGTGTGAGGATACTACATGGTAGAAATGG AATAGATAAAAACGATTTGGTACACGGAACACGGATATATCTCTCGTGGG AAATCTGCATCCGAACAACTCTTCCCCGACGCGAGCGCAAGATGGCCACA AAGGAAACCTCTCAAAATCTTGCTTACATGAAAAACAGACGACCTCCGGA AATATTCGCCAAGAACAATATAACACGTGGAACTAAGTGAACTAAAGCAC TTCTGGGAAACAGGGAAAGTGCTGCTGTTATGCCCCCTCCCCACACTTCT CTAAAAAATGTAAGTACGATGATAATAACTGGTTCACGGATCAGCGTCAC CACCCCCTGCGGCGGGAACCCAGGATGACCAGTTCCCGTCGTCCCCTGCG TCATCCCCTGTGTCATCCCACTCCCCGTCGCCGTATGCATCTTCTTCAGC TTCGGCTCCAGGTTCGGGCACCGGGGCAAGAACTCCTGACGGTGACGGTG GTCTTGACTCTACTTGAAGCGGAATCACACCACGCAGACCTCGAGGCGAT GATACCGCAGCCCCCGCCCCGCTCCCACCGACCGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5033:3184..12168-

>mRNA_L-elsbetiae_contig5033.13056.1 ID=mRNA_L-elsbetiae_contig5033.13056.1|Name=mRNA_L-elsbetiae_contig5033.13056.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1872bp|location=Sequence derived from alignment at L-elsbetiae_contig5033:3184..12168- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTCGCCACCCAGATGTTCCTCGGCACCGCCGCCACCCTCATCGCCTC
GTCTGCGGCTTTCGTCGCCCCGATGGCCGTGCGGTCTGCGGCGCCCGCAG
CGTCCTCGTCGAGCCTCAGGATGAGCGCCGGATCTGACTACGTTGCAACC
CTTCCCGGTGCTCCGTTCGGCGACGGAAAGATGGTCGCCACCCAGATGTT
CCTCGGCACCGCCGCCACCCTCATCGCCTCGTCTGCGGCTTTCGTCGCCC
CGATGGCCGTGCGGTCTGCGGCGCCCGCAGCGTCCTCGTCGAGCCTCAGG
ATGAGCGCCGGATCTGACTACGTTGCAACCCTTCCCGGTGCTCCGTTCGG
CGACGGAAAGATCTTCGATCCCCTCAACATGAGCGAAGGTGCCAACCCCA
AGGACATCAAGAAGTGGCGCGAGGCCGAGATCAAGCACGGCCGTGTGGCC
ATGCTCGCATCGCTCGGTGTTCTCGTCGCAGAGATCTTCGATCCCCTCAA
CATGAGCGAAGGTGCCAACCCCAAGGACATCAAGAAGTGGCGCGAGGCCG
AGATCAAGCACGGCCGTGTGGCCATGCTCGCATCGCTCGGTGTTCTCGTC
GCAGAGGAGTACCACCCCCTGTTCATGGGGAAGGAGTTCATCGGCCCGGC
CATCGAACACTTCCAGGAGATCACCGCGCAGTTCCCCGAGGAGTACCACC
CCCTGTTCATGGGGAAGGAGTTCATCGGCCCGGCCATCGAACACTTCCAG
GAGATCACCGCGCAGTTCCCCGAGTTCTGGGCGTTCGCCCTCCTGGGCAT
GGCCTTCGTCGAGTACAACACCATCGTGACGGCCTTCGCGTCGCCTAGCG
CCGTGACCGGCGAGGGCGGTTCTGGGCGTTCGCCCTCCTGGGCATGGCCT
TCGTCGAGTACAACACCATCGTGACGGCCTTCGCGTCGCCTAGCGCCGTG
ACCGGCGAGGGCGGTGCTGAACCTGGAGAGATCAAGCTGTGGCGCGAGGC
CGAGATCAAGCACGGACGCGTGGCCATGCTCGCGTCGCTCGGGGTCCTTG
TCGCCGAGTGCTGAACCTGGAGAGATCAAGCTGTGGCGCGAGGCCGAGAT
CAAGCACGGACGCGTGGCCATGCTCGCGTCGCTCGGGGTCCTTGTCGCCG
AGGAGTACCACCCGTTCTTCATGGGCCCCGACTACATCGGCCCCGCCGTG
GACCACTTCCAGGAGATCTCCGCCCAGTATCCCGAGGAGTACCACCCGTT
CTTCATGGGCCCCGACTACATCGGCCCCGCCGTGGACCACTTCCAGGAGA
TCTCCGCCCAGTATCCCGAGTTCTGGGTATTCTCCCTCCTGGGCATGGCC
TTCATCGAGTACAACACCATCACCAAGGCGTACGCCAAGCCCAGTGAAGT
GACCGGCGAGGGCGGCCTCAAGGAGGACTACAGCCCGGGAGACCTCGGCT
TCGACCCCCTCGGCATCAAGCCCAAGACCGAGGCGGACTTCGTGACGATG
CAGACCAAGGAGCTCAACAACGGCCGCCTAGCCATGATCGGCATCGCCGG
AATGTTGGTGCAGGAGCTCATCAACCCGGCCGACATCCTCGGCTAATTCT
GGGTATTCTCCCTCCTGGGCATGGCCTTCATCGAGTACAACACCATCACC
AAGGCGTACGCCAAGCCCAGTGAAGTGACCGGCGAGGGCGGCCTCAAGGA
GGACTACAGCCCGGGAGACCTCGGCTTCGACCCCCTCGGCATCAAGCCCA
AGACCGAGGCGGACTTCGTGACGATGCAGACCAAGGAGCTCAACAACGGC
CGCCTAGCCATGATCGGCATCGCCGGAATGTTGGTGCAGGAGCTCATCAA
CCCGGCCGACATCCTCGGCTAA
back to top