mRNA_L-elsbetiae_contig503.13049.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig503.13049.1
Unique NamemRNA_L-elsbetiae_contig503.13049.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig503.13049.1 vs. uniprot
Match: A0A2E3M753_9RICK (NADH-quinone oxidoreductase subunit D n=2 Tax=cellular organisms TaxID=131567 RepID=A0A2E3M753_9RICK)

HSP 1 Score: 639 bits (1649), Expect = 4.640e-229
Identity = 304/390 (77.95%), Postives = 342/390 (87.69%), Query Frame = 1 
Query:    1 ENEIKNFMMNFGPQHPAAHGVLRLILELQGEVVEKADPHIGLLHRGTEKLIENKTYLQGLPYFDRLDYVSMMVQEHAYCLAIEKLLKTDIPKRAQYIRVLFSEITRILNHLLAVTCHALDVGAMTPLL*GFEEREKLMEFYERVSGARMHASYFRPGGVHQDLPLGLLDDIYQFCYNFGSRLDEMEELLSNNRI*KQRLVNIGIVTKKQALD*GFSGVMLRGSGVP*DLRKAQPYEVYDNMPFDIPVGSTGDCFDRYLIRIQEMRQSLRIIQFCIQNMPKGPIKQDDKKIVPPSRIEMKNSMEALIHHFKYYTQGFDVPKGRTYTAVEAPKGEFGVYLISDGSNRPYRCKIRAPGFVHLQGLPFMTKGHMIADVVTIIGTQDIVFGEVDR 1170
            E EIKNF MNFGPQHPAAHGVLRL+LEL GE+VE+ADPHIGLLHRGTEKLIE K YLQ LPYFDRLDYVSMM  EHAY LA+EKLL   +P RAQYIRVLFSEITRILNHLLAV+ HALDVGAMTP L  FEEREKLMEFYERVSGAR+HA+YFRPGGV QD+PLGL DD+Y+F   F SRLDE+EELL+NNRI KQRLV+IG+VT ++AL+ GFSGVMLRGSG+  DLRK QPY+VY+ M FD+PVG+ GDC+DRYLIRI+EMRQSLRI++ CI  MP GP+K  D KI PPSR +MK SME+LIHHFK +T+G+ VP G TYTAVEAPKGEFGVYL+SDG+N+PYRCKI+APGF HLQGL FM+KGHMIADVVTIIGTQDIVFGEVDR
Sbjct:   21 ETEIKNFSMNFGPQHPAAHGVLRLVLELDGELVERADPHIGLLHRGTEKLIEYKNYLQALPYFDRLDYVSMMANEHAYSLAVEKLLNCRVPLRAQYIRVLFSEITRILNHLLAVSTHALDVGAMTPFLWAFEEREKLMEFYERVSGARLHAAYFRPGGVSQDIPLGLCDDVYEFILQFASRLDEIEELLTNNRIWKQRLVDIGVVTGEEALNWGFSGVMLRGSGIDWDLRKTQPYDVYEKMEFDVPVGTNGDCYDRYLIRIEEMRQSLRIMEQCINEMPLGPVKVTDHKITPPSRSDMKTSMESLIHHFKLFTEGYSVPAGETYTAVEAPKGEFGVYLVSDGTNKPYRCKIKAPGFSHLQGLDFMSKGHMIADVVTIIGTQDIVFGEVDR 410
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BLAST of mRNA_L-elsbetiae_contig503.13049.1 vs. uniprot
Match: A0A4D6C7I2_9CHLO (NADH dehydrogenase subunit 7 n=1 Tax=Chloropicon maureeniae TaxID=1461542 RepID=A0A4D6C7I2_9CHLO)

HSP 1 Score: 639 bits (1647), Expect = 4.810e-229
Identity = 300/390 (76.92%), Postives = 347/390 (88.97%), Query Frame = 1 
Query:    1 ENEIKNFMMNFGPQHPAAHGVLRLILELQGEVVEKADPHIGLLHRGTEKLIENKTYLQGLPYFDRLDYVSMMVQEHAYCLAIEKLLKTDIPKRAQYIRVLFSEITRILNHLLAVTCHALDVGAMTPLL*GFEEREKLMEFYERVSGARMHASYFRPGGVHQDLPLGLLDDIYQFCYNFGSRLDEMEELLSNNRI*KQRLVNIGIVTKKQALD*GFSGVMLRGSGVP*DLRKAQPYEVYDNMPFDIPVGSTGDCFDRYLIRIQEMRQSLRIIQFCIQNMPKGPIKQDDKKIVPPSRIEMKNSMEALIHHFKYYTQGFDVPKGRTYTAVEAPKGEFGVYLISDGSNRPYRCKIRAPGFVHLQGLPFMTKGHMIADVVTIIGTQDIVFGEVDR 1170
            + E+++F +NFGPQHPAAHGVLRL+LE+ GEVVE+ADPHIGLLHRGTEKLIE KTY+Q +PYFDRLDYVSMM QEHAY LAIEKLL+ ++PKRAQYIRVLFSE+TRI+NHLLA+T HA+DVGA+TP L  FEERE+L EFYERVSGARMHA+YFRPGGV QDLP+GL DDIY F  +F +R+DEMEELL++NRI KQRLVNIGIVTK++ALD GF+GVMLRGSGV  DLRKAQPYEVYD + FDIPVG+ GDC+DRYLIR++EMRQSLRII  C+  +P+GP++ DD KI PPSR EMK +ME LIHHFK YT+GF VP G TYT++EAPKGEFGVYL+SDGSNRPYRCKIRAPGF HLQGL FM++ HM+ADVVTIIGTQDIVFGEVDR
Sbjct:    3 QKELQHFTLNFGPQHPAAHGVLRLVLEMNGEVVERADPHIGLLHRGTEKLIEYKTYIQAMPYFDRLDYVSMMCQEHAYVLAIEKLLRCEVPKRAQYIRVLFSELTRIMNHLLALTTHAMDVGALTPFLWAFEERERLFEFYERVSGARMHAAYFRPGGVAQDLPVGLCDDIYLFAEHFAARIDEMEELLTSNRIWKQRLVNIGIVTKQEALDWGFTGVMLRGSGVAWDLRKAQPYEVYDELEFDIPVGTRGDCYDRYLIRVEEMRQSLRIISQCLNVIPEGPVQSDDYKISPPSRSEMKETMEGLIHHFKLYTEGFHVPAGETYTSIEAPKGEFGVYLVSDGSNRPYRCKIRAPGFFHLQGLDFMSRHHMLADVVTIIGTQDIVFGEVDR 392
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BLAST of mRNA_L-elsbetiae_contig503.13049.1 vs. uniprot
Match: NDUS2_RECAM (NADH-ubiquinone oxidoreductase 49 kDa subunit n=1 Tax=Reclinomonas americana TaxID=48483 RepID=NDUS2_RECAM)

HSP 1 Score: 637 bits (1643), Expect = 2.270e-228
Identity = 302/388 (77.84%), Postives = 344/388 (88.66%), Query Frame = 1 
Query:    7 EIKNFMMNFGPQHPAAHGVLRLILELQGEVVEKADPHIGLLHRGTEKLIENKTYLQGLPYFDRLDYVSMMVQEHAYCLAIEKLLKTDIPKRAQYIRVLFSEITRILNHLLAVTCHALDVGAMTPLL*GFEEREKLMEFYERVSGARMHASYFRPGGVHQDLPLGLLDDIYQFCYNFGSRLDEMEELLSNNRI*KQRLVNIGIVTKKQALD*GFSGVMLRGSGVP*DLRKAQPYEVYDNMPFDIPVGSTGDCFDRYLIRIQEMRQSLRIIQFCIQNMPKGPIKQDDKKIVPPSRIEMKNSMEALIHHFKYYTQGFDVPKGRTYTAVEAPKGEFGVYLISDGSNRPYRCKIRAPGFVHLQGLPFMTKGHMIADVVTIIGTQDIVFGEVDR 1170
            ++KNF MNFGPQHPAAHGVLRL+LEL GEVV +ADPHIGLLHRGTEKLIE K YLQ LPYFDRLDYVSMM QEHAY LA+EKLL  ++PKRAQYIRVLF EITRILNHL+AVT HALDVGAMTP L GFEEREKLMEFYERVSGARMHA+Y RPGGV QD+P+GL +DIY+F   FGSR+DE+E++LS+NRI KQRLV+IG V+ ++ALD GFSGVMLRGSG+  DLRK QPY+VYD + FDIPVG+ GDC+DRYLIR++EMRQSL++I  C+  MP G IK DDKKI PPSR++MK+SMEALIHHFK YT+G+ VP G TYTAVEAPKGEFGVYL+SDGS++PYRCKI+APGF HLQGL FM+KGHMIADVVTIIGTQDIVFGEVDR
Sbjct:    9 KLKNFTMNFGPQHPAAHGVLRLVLELNGEVVNRADPHIGLLHRGTEKLIEYKNYLQALPYFDRLDYVSMMAQEHAYSLAVEKLLGCEVPKRAQYIRVLFCEITRILNHLMAVTTHALDVGAMTPFLWGFEEREKLMEFYERVSGARMHAAYIRPGGVSQDMPMGLSEDIYKFAKQFGSRIDEIEDVLSSNRIWKQRLVDIGTVSAEEALDWGFSGVMLRGSGIAWDLRKTQPYDVYDELEFDIPVGTKGDCYDRYLIRVEEMRQSLKLIMQCLNKMPTGVIKVDDKKISPPSRVDMKDSMEALIHHFKLYTEGYSVPIGETYTAVEAPKGEFGVYLVSDGSSKPYRCKIKAPGFSHLQGLNFMSKGHMIADVVTIIGTQDIVFGEVDR 396
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BLAST of mRNA_L-elsbetiae_contig503.13049.1 vs. uniprot
Match: A0A348AYT9_9EUKA (NADH dehydrogenase subunit 7 n=1 Tax=Ophirina amphinema TaxID=2108040 RepID=A0A348AYT9_9EUKA)

HSP 1 Score: 635 bits (1638), Expect = 2.360e-227
Identity = 294/388 (75.77%), Postives = 344/388 (88.66%), Query Frame = 1 
Query:    7 EIKNFMMNFGPQHPAAHGVLRLILELQGEVVEKADPHIGLLHRGTEKLIENKTYLQGLPYFDRLDYVSMMVQEHAYCLAIEKLLKTDIPKRAQYIRVLFSEITRILNHLLAVTCHALDVGAMTPLL*GFEEREKLMEFYERVSGARMHASYFRPGGVHQDLPLGLLDDIYQFCYNFGSRLDEMEELLSNNRI*KQRLVNIGIVTKKQALD*GFSGVMLRGSGVP*DLRKAQPYEVYDNMPFDIPVGSTGDCFDRYLIRIQEMRQSLRIIQFCIQNMPKGPIKQDDKKIVPPSRIEMKNSMEALIHHFKYYTQGFDVPKGRTYTAVEAPKGEFGVYLISDGSNRPYRCKIRAPGFVHLQGLPFMTKGHMIADVVTIIGTQDIVFGEVDR 1170
            ++KN  +NFGPQHPAAHGVLRL+LEL GEVV++ADPHIGLLHRGTEKLIE+KTYLQ LPYFDRLDYVSMM QEHAY +AIEKLL  DIP+RAQYIRVLFSEITRILNHLLA++CHALDVGAMTP   GFEEREKLMEFYERVSGAR+HA+Y RPGGV QD+P+GLLDD+Y+FC  F SRLDE+EELL++NRI KQRLV++G+V+ K ALD GFSGVMLRGSGVP DLRK+QPYEVY  + F++PVG  GDC+DRYLIR++EMRQS+RI+  C+  MP G +K DD K+ PPSR+ MK+SME+LIHHFK Y++GF VP+G  Y AVEAPKGEFGVYL+SDGSN+PYRCKI+APGF+HLQ L  M++GHM+ADVVTIIGTQDIVFGE+DR
Sbjct:   25 KVKNLTLNFGPQHPAAHGVLRLVLELNGEVVQRADPHIGLLHRGTEKLIEHKTYLQALPYFDRLDYVSMMAQEHAYSMAIEKLLGCDIPERAQYIRVLFSEITRILNHLLAISCHALDVGAMTPFFWGFEEREKLMEFYERVSGARLHAAYIRPGGVSQDIPIGLLDDVYKFCVQFPSRLDEIEELLTDNRIWKQRLVDVGVVSVKDALDWGFSGVMLRGSGVPWDLRKSQPYEVYGELEFEVPVGKAGDCYDRYLIRMEEMRQSIRIMLQCLNKMPSGLVKVDDGKVSPPSRVSMKDSMESLIHHFKLYSEGFSVPRGEAYVAVEAPKGEFGVYLVSDGSNKPYRCKIKAPGFLHLQALDLMSRGHMLADVVTIIGTQDIVFGEIDR 412
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BLAST of mRNA_L-elsbetiae_contig503.13049.1 vs. uniprot
Match: F1DPM6_COCSC (NADH dehydrogenase subunit 7 n=4 Tax=Trebouxiophyceae TaxID=75966 RepID=F1DPM6_COCSC)

HSP 1 Score: 634 bits (1634), Expect = 5.730e-227
Identity = 298/388 (76.80%), Postives = 341/388 (87.89%), Query Frame = 1 
Query:    7 EIKNFMMNFGPQHPAAHGVLRLILELQGEVVEKADPHIGLLHRGTEKLIENKTYLQGLPYFDRLDYVSMMVQEHAYCLAIEKLLKTDIPKRAQYIRVLFSEITRILNHLLAVTCHALDVGAMTPLL*GFEEREKLMEFYERVSGARMHASYFRPGGVHQDLPLGLLDDIYQFCYNFGSRLDEMEELLSNNRI*KQRLVNIGIVTKKQALD*GFSGVMLRGSGVP*DLRKAQPYEVYDNMPFDIPVGSTGDCFDRYLIRIQEMRQSLRIIQFCIQNMPKGPIKQDDKKIVPPSRIEMKNSMEALIHHFKYYTQGFDVPKGRTYTAVEAPKGEFGVYLISDGSNRPYRCKIRAPGFVHLQGLPFMTKGHMIADVVTIIGTQDIVFGEVDR 1170
            +IKNF +NFGPQHPAAHGVLRL+LE+ GEVV++ADPHIGLLHRGTEKLIE KTYLQ LPYFDRLDYVSMM QEH Y LA+E+LL  ++P RAQYIRVLF+EITRILNHLLA+TCHA+DVGA+TP L GFEEREKLMEFYERVSGARMHA+Y RPGGV QDLP+GL +DIY+F   F SR+DEMEE+L+NNRI KQRLV++G+VT  QALD GFSGVMLRGSG+  DLRK QPY+VY  M F +PVGS GDC+DRYLIR++EMRQSLR+I  C+Q MP+G IK DD+KI PPSR +MK SME+LIHHFK YT+GF VP G TYTAVEAPKGEFGV+L+S+G+NRPYRCKIRAPGF HLQGL FM + HM+ADVVTIIGTQDIVFGEVDR
Sbjct:   11 KIKNFTINFGPQHPAAHGVLRLVLEMNGEVVKRADPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCQEHGYSLAVERLLGCEVPLRAQYIRVLFAEITRILNHLLALTCHAMDVGALTPFLWGFEEREKLMEFYERVSGARMHAAYIRPGGVAQDLPIGLSEDIYRFARQFASRIDEMEEMLTNNRIWKQRLVDVGVVTADQALDWGFSGVMLRGSGIGWDLRKTQPYDVYSKMDFQVPVGSRGDCYDRYLIRVEEMRQSLRMIMQCLQEMPQGLIKSDDRKITPPSRSQMKQSMESLIHHFKLYTEGFAVPAGETYTAVEAPKGEFGVFLVSNGTNRPYRCKIRAPGFAHLQGLDFMARNHMLADVVTIIGTQDIVFGEVDR 398
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BLAST of mRNA_L-elsbetiae_contig503.13049.1 vs. uniprot
Match: A0A097P5X6_CHLVA (NADH dehydrogenase subunit 7 n=8 Tax=cellular organisms TaxID=131567 RepID=A0A097P5X6_CHLVA)

HSP 1 Score: 633 bits (1632), Expect = 1.150e-226
Identity = 297/388 (76.55%), Postives = 342/388 (88.14%), Query Frame = 1 
Query:    7 EIKNFMMNFGPQHPAAHGVLRLILELQGEVVEKADPHIGLLHRGTEKLIENKTYLQGLPYFDRLDYVSMMVQEHAYCLAIEKLLKTDIPKRAQYIRVLFSEITRILNHLLAVTCHALDVGAMTPLL*GFEEREKLMEFYERVSGARMHASYFRPGGVHQDLPLGLLDDIYQFCYNFGSRLDEMEELLSNNRI*KQRLVNIGIVTKKQALD*GFSGVMLRGSGVP*DLRKAQPYEVYDNMPFDIPVGSTGDCFDRYLIRIQEMRQSLRIIQFCIQNMPKGPIKQDDKKIVPPSRIEMKNSMEALIHHFKYYTQGFDVPKGRTYTAVEAPKGEFGVYLISDGSNRPYRCKIRAPGFVHLQGLPFMTKGHMIADVVTIIGTQDIVFGEVDR 1170
            +IKNF +NFGPQHPAAHGVLRL+LE+ GEVV++ADPH+GLLHRGTEKLIE K YLQ LPYFDRLDYVSMM QEHAY LA+EKLL + +P RAQYIRVLFSEITR+LNHLLA+TCHA+DVGA+TP L GFEEREKLMEFYERVSGARMHA+Y RPGGV QDLPLG+ +DI++F   F SR+DEMEE+L+NNRI KQRLV+IG+VT  QALD GFSGVM+R SG+  DLRK QPY+VY+ M FDIPVG+ GDC+DRYLIRI+EMRQSLRII  C+  MP+G IK DD+KI PPSR +MK SME+LIHHFK YT+GF VP G TYTAVEAPKGEFGVYL+S+G+N+PYRCKIRAPGF HLQG+ FM++ HM+ADVVTIIGTQDIVFGEVDR
Sbjct:   11 KIKNFTINFGPQHPAAHGVLRLVLEMNGEVVQRADPHVGLLHRGTEKLIEYKNYLQALPYFDRLDYVSMMCQEHAYSLAVEKLLNSQVPLRAQYIRVLFSEITRLLNHLLALTCHAMDVGALTPFLWGFEEREKLMEFYERVSGARMHAAYIRPGGVAQDLPLGISEDIFKFAQQFASRIDEMEEMLTNNRIWKQRLVDIGVVTADQALDWGFSGVMMRASGISWDLRKTQPYDVYNRMNFDIPVGTRGDCYDRYLIRIEEMRQSLRIIMQCLNEMPQGMIKTDDRKITPPSRSQMKQSMESLIHHFKLYTEGFVVPAGETYTAVEAPKGEFGVYLVSNGTNKPYRCKIRAPGFAHLQGIDFMSRNHMLADVVTIIGTQDIVFGEVDR 398
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BLAST of mRNA_L-elsbetiae_contig503.13049.1 vs. uniprot
Match: D3IUK8_HETAK (NADH dehydrogenase subunit 7 n=5 Tax=Chattonellaceae TaxID=658124 RepID=D3IUK8_HETAK)

HSP 1 Score: 632 bits (1631), Expect = 1.580e-226
Identity = 304/388 (78.35%), Postives = 336/388 (86.60%), Query Frame = 1 
Query:    7 EIKNFMMNFGPQHPAAHGVLRLILELQGEVVEKADPHIGLLHRGTEKLIENKTYLQGLPYFDRLDYVSMMVQEHAYCLAIEKLLKTDIPKRAQYIRVLFSEITRILNHLLAVTCHALDVGAMTPLL*GFEEREKLMEFYERVSGARMHASYFRPGGVHQDLPLGLLDDIYQFCYNFGSRLDEMEELLSNNRI*KQRLVNIGIVTKKQALD*GFSGVMLRGSGVP*DLRKAQPYEVYDNMPFDIPVGSTGDCFDRYLIRIQEMRQSLRIIQFCIQNMPKGPIKQDDKKIVPPSRIEMKNSMEALIHHFKYYTQGFDVPKGRTYTAVEAPKGEFGVYLISDGSNRPYRCKIRAPGFVHLQGLPFMTKGHMIADVVTIIGTQDIVFGEVDR 1170
            +IKNF +NFGPQHPAAHGVLRL+LEL GEVV++ADPHIGLLHRGTEKLIE KTY+Q LPYFDRLDYVSMM QEH Y L IEKLL  DIP RAQYIRVLF EITRILNHLLAV CHA+DVGAMTP L  FEEREKLMEFYERVSGARMHA+YFRPGGV QDLPLG+LDDIY F   F +RLDEMEE+L++NRI KQRLV+IGIV+KK A D GFSGVMLRGS +P DLRK QPYEVYD M F++PVG  GDC+DRYLIR+QEMR+SL+IIQ C+ NMP GP+K DD KI  PSR +MK SME+LIHHFK YT+G  VP G TYTA EAPKGEFGVYL+S+G+NRPYRCKI+APGF HLQ L FM KGHM+ADVVTIIGTQDIVFGEVDR
Sbjct:   10 KIKNFTINFGPQHPAAHGVLRLVLELNGEVVDRADPHIGLLHRGTEKLIEYKTYIQALPYFDRLDYVSMMTQEHTYVLGIEKLLGCDIPVRAQYIRVLFCEITRILNHLLAVGCHAMDVGAMTPFLWAFEEREKLMEFYERVSGARMHAAYFRPGGVSQDLPLGILDDIYLFSKQFVTRLDEMEEMLTSNRIWKQRLVDIGIVSKKDACDWGFSGVMLRGSTIPWDLRKNQPYEVYDKMEFEVPVGKNGDCYDRYLIRMQEMRESLKIIQQCLNNMPLGPVKLDDHKITSPSRSDMKQSMESLIHHFKLYTEGMVVPAGETYTATEAPKGEFGVYLVSNGTNRPYRCKIKAPGFGHLQALDFMAKGHMVADVVTIIGTQDIVFGEVDR 397
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BLAST of mRNA_L-elsbetiae_contig503.13049.1 vs. uniprot
Match: A0A2E4IJ50_9BACT (NADH-quinone oxidoreductase subunit D n=2 Tax=cellular organisms TaxID=131567 RepID=A0A2E4IJ50_9BACT)

HSP 1 Score: 632 bits (1629), Expect = 3.310e-226
Identity = 297/388 (76.55%), Postives = 338/388 (87.11%), Query Frame = 1 
Query:    7 EIKNFMMNFGPQHPAAHGVLRLILELQGEVVEKADPHIGLLHRGTEKLIENKTYLQGLPYFDRLDYVSMMVQEHAYCLAIEKLLKTDIPKRAQYIRVLFSEITRILNHLLAVTCHALDVGAMTPLL*GFEEREKLMEFYERVSGARMHASYFRPGGVHQDLPLGLLDDIYQFCYNFGSRLDEMEELLSNNRI*KQRLVNIGIVTKKQALD*GFSGVMLRGSGVP*DLRKAQPYEVYDNMPFDIPVGSTGDCFDRYLIRIQEMRQSLRIIQFCIQNMPKGPIKQDDKKIVPPSRIEMKNSMEALIHHFKYYTQGFDVPKGRTYTAVEAPKGEFGVYLISDGSNRPYRCKIRAPGFVHLQGLPFMTKGHMIADVVTIIGTQDIVFGEVDR 1170
            ++KNF +NFGPQHPAAHGVLRL+LE+ GEVVE+ADPHIGLLHRGTEKLIE K Y+Q LPYFDRLDYVSMM QEH Y LA+EKLL  ++P RAQYIRVLF EITR+LNHLLA++CHA+DVGA+TP L  FEEREKLMEFYERVSGARMHA+Y RPGGV QDLPLG  DD++ FC +F SR+DEMEE+L+NNRI KQRLV+IG+VT ++ALD GFSGVMLRGSGV  DLRK QPY+VY+ + FDIPVGS GDC+DRYLIRI+EMRQSLR+I  C+  +P+G IK DD+KI PPSR  MK SME+LIHHFK YT+GF VP   TYTAVEAPKGEFGVYL+S+GSNRPYRCKIRAPGFVHLQ L FM K HM+ADVVTIIGTQDIVFGEVDR
Sbjct:   11 KVKNFTLNFGPQHPAAHGVLRLVLEMNGEVVERADPHIGLLHRGTEKLIEYKNYMQALPYFDRLDYVSMMAQEHGYSLAVEKLLNCEVPLRAQYIRVLFCEITRLLNHLLALSCHAMDVGALTPFLWAFEEREKLMEFYERVSGARMHAAYIRPGGVSQDLPLGFCDDVHVFCQHFASRIDEMEEMLTNNRIWKQRLVDIGVVTAEEALDWGFSGVMLRGSGVAWDLRKTQPYDVYNELNFDIPVGSRGDCYDRYLIRIEEMRQSLRLIMECVNKLPEGLIKTDDRKITPPSRAHMKESMESLIHHFKLYTEGFVVPASETYTAVEAPKGEFGVYLVSNGSNRPYRCKIRAPGFVHLQALDFMAKNHMLADVVTIIGTQDIVFGEVDR 398
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BLAST of mRNA_L-elsbetiae_contig503.13049.1 vs. uniprot
Match: A0A2E3IDI2_9RICK (NADH-quinone oxidoreductase subunit D n=6 Tax=cellular organisms TaxID=131567 RepID=A0A2E3IDI2_9RICK)

HSP 1 Score: 631 bits (1628), Expect = 3.760e-226
Identity = 297/390 (76.15%), Postives = 342/390 (87.69%), Query Frame = 1 
Query:    1 ENEIKNFMMNFGPQHPAAHGVLRLILELQGEVVEKADPHIGLLHRGTEKLIENKTYLQGLPYFDRLDYVSMMVQEHAYCLAIEKLLKTDIPKRAQYIRVLFSEITRILNHLLAVTCHALDVGAMTPLL*GFEEREKLMEFYERVSGARMHASYFRPGGVHQDLPLGLLDDIYQFCYNFGSRLDEMEELLSNNRI*KQRLVNIGIVTKKQALD*GFSGVMLRGSGVP*DLRKAQPYEVYDNMPFDIPVGSTGDCFDRYLIRIQEMRQSLRIIQFCIQNMPKGPIKQDDKKIVPPSRIEMKNSMEALIHHFKYYTQGFDVPKGRTYTAVEAPKGEFGVYLISDGSNRPYRCKIRAPGFVHLQGLPFMTKGHMIADVVTIIGTQDIVFGEVDR 1170
            + E+KNF +NFGPQHPAAHGVLRL+LE+ GEVV++ADPHIGLLHRGTEKLIE KT+LQ LPYFDRLDYVSMM QEHAY LA+EKLL  ++P R QYIRVLFSEITR+LNHLLA+T HA+DVGA+TP L  FEERE+LMEFYERVSGAR+HA+Y RPGGV QDLP  L +DIYQF  +FGSR+DEMEELL+ NRI KQRLVNIG+V++ +ALD GF+GVMLRGSGV  DLRK++PY+VYD M FDIPVG+ GDC+DRYLIR++EMRQSLRII  C+  +P GP K DD K+ PPSR +MK SME+LIHHFK YT+GF VPKG TYT+VEAPKGEFGVYL+SDGSNRPYRCKIRAPGF HLQGL FM++ HM+ADVVTIIGTQDIVFGEVDR
Sbjct:    3 QKELKNFTLNFGPQHPAAHGVLRLVLEMNGEVVDRADPHIGLLHRGTEKLIEYKTFLQALPYFDRLDYVSMMCQEHAYSLAVEKLLNAEVPLRGQYIRVLFSEITRLLNHLLALTTHAMDVGALTPFLWAFEERERLMEFYERVSGARLHAAYVRPGGVSQDLPHSLCEDIYQFAQSFGSRIDEMEELLTGNRIWKQRLVNIGVVSRAEALDWGFTGVMLRGSGVEWDLRKSEPYDVYDRMDFDIPVGTRGDCYDRYLIRVEEMRQSLRIISQCLNQIPDGPFKTDDFKLSPPSRTDMKESMESLIHHFKLYTEGFHVPKGDTYTSVEAPKGEFGVYLVSDGSNRPYRCKIRAPGFYHLQGLDFMSRYHMLADVVTIIGTQDIVFGEVDR 392
[Close]
BLAST of mRNA_L-elsbetiae_contig503.13049.1 vs. uniprot
Match: A0A4D6C4U6_9CHLO (NADH dehydrogenase subunit 7 n=1 Tax=Chloroparvula japonica TaxID=1411623 RepID=A0A4D6C4U6_9CHLO)

HSP 1 Score: 630 bits (1625), Expect = 1.200e-225
Identity = 294/388 (75.77%), Postives = 341/388 (87.89%), Query Frame = 1 
Query:    7 EIKNFMMNFGPQHPAAHGVLRLILELQGEVVEKADPHIGLLHRGTEKLIENKTYLQGLPYFDRLDYVSMMVQEHAYCLAIEKLLKTDIPKRAQYIRVLFSEITRILNHLLAVTCHALDVGAMTPLL*GFEEREKLMEFYERVSGARMHASYFRPGGVHQDLPLGLLDDIYQFCYNFGSRLDEMEELLSNNRI*KQRLVNIGIVTKKQALD*GFSGVMLRGSGVP*DLRKAQPYEVYDNMPFDIPVGSTGDCFDRYLIRIQEMRQSLRIIQFCIQNMPKGPIKQDDKKIVPPSRIEMKNSMEALIHHFKYYTQGFDVPKGRTYTAVEAPKGEFGVYLISDGSNRPYRCKIRAPGFVHLQGLPFMTKGHMIADVVTIIGTQDIVFGEVDR 1170
            E+KNF +NFGPQHPAAHGVLRL+LE+ GEVVEKADPHIGLLHRGTEKLIE KTYLQ +PYFDRLDYVSMM QEHAY LA+EKL++  +P+RA YIRVL+SE+TR++NHLLA+T HA+DVGA+TP L  FEEREKL EFYERVSGARMHA+YFRPGGV QDLPLGL +DIY+F  +F SR+DEMEE+L+NNRI KQRLVNIG+VT K+ALD G SG MLRGSG+  DLRKA+PYEVYD M FD+PVG+ GDC+DRYLIRI+EMRQSLRII  C+  MP G +K DD+K+ PPSR +MK SME+LIHHFK YT+GF+VP G TYT++EAPKGEFGVYL+SDGS+RPYRCKIRAPGF HLQ L  M+K HM+ADVVT+IGTQDIVFGEVDR
Sbjct:    8 EVKNFTLNFGPQHPAAHGVLRLVLEMNGEVVEKADPHIGLLHRGTEKLIEYKTYLQAMPYFDRLDYVSMMCQEHAYVLAVEKLVRCSVPERAMYIRVLYSELTRLMNHLLALTTHAMDVGALTPFLWAFEEREKLFEFYERVSGARMHAAYFRPGGVAQDLPLGLCNDIYKFAQSFASRIDEMEEMLTNNRIWKQRLVNIGVVTGKEALDWGLSGPMLRGSGIAWDLRKAEPYEVYDRMDFDVPVGTNGDCYDRYLIRIEEMRQSLRIIAQCLNTMPSGMVKTDDRKLTPPSRGQMKQSMESLIHHFKLYTEGFNVPAGSTYTSIEAPKGEFGVYLVSDGSSRPYRCKIRAPGFAHLQALDMMSKHHMLADVVTMIGTQDIVFGEVDR 395
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig503.13049.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E3M753_9RICK4.640e-22977.95NADH-quinone oxidoreductase subunit D n=2 Tax=cell... [more]
A0A4D6C7I2_9CHLO4.810e-22976.92NADH dehydrogenase subunit 7 n=1 Tax=Chloropicon m... [more]
NDUS2_RECAM2.270e-22877.84NADH-ubiquinone oxidoreductase 49 kDa subunit n=1 ... [more]
A0A348AYT9_9EUKA2.360e-22775.77NADH dehydrogenase subunit 7 n=1 Tax=Ophirina amph... [more]
F1DPM6_COCSC5.730e-22776.80NADH dehydrogenase subunit 7 n=4 Tax=Trebouxiophyc... [more]
A0A097P5X6_CHLVA1.150e-22676.55NADH dehydrogenase subunit 7 n=8 Tax=cellular orga... [more]
D3IUK8_HETAK1.580e-22678.35NADH dehydrogenase subunit 7 n=5 Tax=Chattonellace... [more]
A0A2E4IJ50_9BACT3.310e-22676.55NADH-quinone oxidoreductase subunit D n=2 Tax=cell... [more]
A0A2E3IDI2_9RICK3.760e-22676.15NADH-quinone oxidoreductase subunit D n=6 Tax=cell... [more]
A0A4D6C4U6_9CHLO1.200e-22575.77NADH dehydrogenase subunit 7 n=1 Tax=Chloroparvula... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig503contigL-elsbetiae_contig503:21117..22289 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score244.6
Seed ortholog evalue3e-62
Seed eggNOG ortholog10181.XP_004858719.1
Preferred nameNDUFS2
KEGG rclassRC00061
KEGG koko:K03935
KEGG TC3.D.1.6
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00143
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0005759,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0008137,GO:0008150,GO:0008152,GO:0009055,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0010257,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0019866,GO:0019899,GO:0022607,GO:0022900,GO:0022904,GO:0030964,GO:0031090,GO:0031625,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032981,GO:0032991,GO:0033108,GO:0034622,GO:0034641,GO:0042773,GO:0042775,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0050896,GO:0055086,GO:0055114,GO:0065003,GO:0070013,GO:0070469,GO:0071704,GO:0071840,GO:0072521,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204
EggNOG free text desc.NADH dehydrogenase ubiquinone iron-sulfur protein 2, mitochondrial
EggNOG OGs35HI2@314146,38E8K@33154,3BADS@33208,3CS8G@33213,3J7I4@40674,488M0@7711,48YB9@7742,4Q4H0@9989,COG0649@1,KOG2870@2759
EC1.6.5.3,1.6.99.3
COG Functional cat.C
Best tax levelRodentia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size1173
Cds size453
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816507.967676-CDS-L-elsbetiae_contig503:21116..215691622816507.967676-CDS-L-elsbetiae_contig503:21116..21569Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig503 21117..21569 -
1691683610.1556509-CDS-L-elsbetiae_contig503:21116..215691691683610.1556509-CDS-L-elsbetiae_contig503:21116..21569Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig503 21117..21569 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816507.9780915-UTR-L-elsbetiae_contig503:21569..222891622816507.9780915-UTR-L-elsbetiae_contig503:21569..22289Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig503 21570..22289 -
1691683610.171988-UTR-L-elsbetiae_contig503:21569..222891691683610.171988-UTR-L-elsbetiae_contig503:21569..22289Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig503 21570..22289 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig503.13049.1prot_L-elsbetiae_contig503.13049.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig503 21117..21569 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig503.13049.1

>prot_L-elsbetiae_contig503.13049.1 ID=prot_L-elsbetiae_contig503.13049.1|Name=mRNA_L-elsbetiae_contig503.13049.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=151bp
MPFDIPVGSTGDCFDRYLIRIQEMRQSLRIIQFCIQNMPKGPIKQDDKKI
VPPSRIEMKNSMEALIHHFKYYTQGFDVPKGRTYTAVEAPKGEFGVYLIS
DGSNRPYRCKIRAPGFVHLQGLPFMTKGHMIADVVTIIGTQDIVFGEVDR
*
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mRNA from alignment at L-elsbetiae_contig503:21117..22289-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig503.13049.1 ID=mRNA_L-elsbetiae_contig503.13049.1|Name=mRNA_L-elsbetiae_contig503.13049.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1173bp|location=Sequence derived from alignment at L-elsbetiae_contig503:21117..22289- (Laminarionema elsbetiae ELsaHSoW15)
GAAAACGAAATAAAAAATTTTATGATGAATTTTGGACCTCAACACCCTGC
AGCTCATGGTGTTTTACGTTTAATTCTAGAATTACAAGGTGAAGTTGTAG
AAAAAGCTGATCCGCATATAGGATTATTACATAGAGGTACTGAAAAATTA
ATAGAAAATAAAACTTATTTACAAGGTTTACCTTATTTTGACCGTTTAGA
TTATGTTTCTATGATGGTTCAAGAACATGCTTATTGTTTAGCTATTGAAA
AATTACTTAAAACAGATATACCAAAACGCGCACAATATATACGTGTACTA
TTTTCTGAAATTACCCGTATTTTAAACCATTTATTAGCTGTAACTTGTCA
CGCTTTAGATGTAGGTGCTATGACACCTTTATTATGAGGGTTTGAAGAAA
GAGAAAAATTAATGGAATTTTATGAAAGAGTTTCTGGCGCAAGAATGCAC
GCTAGTTATTTCCGTCCTGGAGGTGTCCATCAAGATTTACCTTTAGGATT
ATTAGACGATATTTACCAATTTTGTTATAATTTTGGAAGTCGTTTAGATG
AAATGGAAGAACTTTTATCTAATAATCGTATTTGAAAACAGCGCCTAGTT
AATATAGGAATTGTCACTAAAAAACAAGCTTTAGATTGAGGGTTTAGCGG
TGTTATGTTAAGAGGGTCAGGAGTTCCATGAGATTTACGTAAGGCTCAAC
CTTATGAAGTTTACGATAATATGCCTTTCGATATTCCAGTCGGAAGCACA
GGCGATTGTTTTGATCGTTACTTAATACGTATCCAAGAAATGCGTCAAAG
TTTACGTATAATACAGTTTTGCATACAAAATATGCCAAAAGGTCCTATTA
AACAAGATGATAAAAAAATCGTTCCACCTTCAAGAATTGAAATGAAAAAT
TCAATGGAAGCTTTAATTCACCATTTTAAATATTACACTCAGGGATTTGA
CGTTCCAAAAGGGCGTACATATACTGCTGTAGAAGCTCCTAAAGGAGAAT
TTGGCGTATACCTTATTTCTGATGGTTCTAATAGACCTTATCGCTGTAAA
ATACGAGCGCCAGGTTTTGTACATTTACAAGGGCTTCCTTTTATGACAAA
AGGCCACATGATTGCCGATGTAGTTACAATTATAGGAACACAAGATATAG
TTTTCGGGGAAGTAGACCGTTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig503:21117..22289-

>mRNA_L-elsbetiae_contig503.13049.1 ID=mRNA_L-elsbetiae_contig503.13049.1|Name=mRNA_L-elsbetiae_contig503.13049.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=906bp|location=Sequence derived from alignment at L-elsbetiae_contig503:21117..22289- (Laminarionema elsbetiae ELsaHSoW15)
ATGCCTTTCGATATTCCAGTCGGAAGCACAGGCGATTGTTTTGATCGTTA
CTTAATACGTATCCAAGAAATGCGTCAAAGTTTACGTATAATACAGTTTT
GCATACAAAATATGCCAAAAGGTCCTATTAAACAAGATGATAAAAAAATC
GTTCCACCTTCAAGAATTGAAATGAAAAATTCAATGGAAGCTTTAATTCA
CCATTTTAAATATTACACTCAGGGATTTGACGTTCCAAAAGGGCGTACAT
ATACTGCTGTAGAAGCTCCTAAAGGAGAATTTGGCGTATACCTTATTTCT
GATGGTTCTAATAGACCTTATCGCTGTAAAATACGAGCGCCAGGTTTTGT
ACATTTACAAGGGCTTCCTTTTATGACAAAAGGCCACATGATTGCCGATG
TAGTTACAATTATAGGAACACAAGATATAGTTTTCGGGGAAGTAGACCGT
TAAATGCCTTTCGATATTCCAGTCGGAAGCACAGGCGATTGTTTTGATCG
TTACTTAATACGTATCCAAGAAATGCGTCAAAGTTTACGTATAATACAGT
TTTGCATACAAAATATGCCAAAAGGTCCTATTAAACAAGATGATAAAAAA
ATCGTTCCACCTTCAAGAATTGAAATGAAAAATTCAATGGAAGCTTTAAT
TCACCATTTTAAATATTACACTCAGGGATTTGACGTTCCAAAAGGGCGTA
CATATACTGCTGTAGAAGCTCCTAAAGGAGAATTTGGCGTATACCTTATT
TCTGATGGTTCTAATAGACCTTATCGCTGTAAAATACGAGCGCCAGGTTT
TGTACATTTACAAGGGCTTCCTTTTATGACAAAAGGCCACATGATTGCCG
ATGTAGTTACAATTATAGGAACACAAGATATAGTTTTCGGGGAAGTAGAC
CGTTAA
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