mRNA_L-elsbetiae_contig503.13048.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig503.13048.1
Unique NamemRNA_L-elsbetiae_contig503.13048.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig503.13048.1 vs. uniprot
Match: A0A2E9XPS8_9RICK (NADH-quinone oxidoreductase subunit M n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E9XPS8_9RICK)

HSP 1 Score: 586 bits (1510), Expect = 1.700e-206
Identity = 306/430 (71.16%), Postives = 367/430 (85.35%), Query Frame = 1
Query:    1 LDQSNPHFQKMFCLELVPSLNFSLAFGIDGISIYFILLTNLFIYLCILSLSPSLNKLYEILLYLFFLQ*GILCAFSVLDLLGFFIFFEATLIPIYFIVLI*GSRERKVRASYLISIYTLFGSIFMFFNIIYILSKTGVTDYQYLLTLVFSKEDQKFL*ITFFIAFAAKIPLFPLHI*LPEAHVEAPTVGSVLLAVLLLKLGTYGIIRFSIPLFPYGTLYYTPLIYTFAVFGIIYTCFTAIRQIDLKKIIAYSSVGHMNVVLLGIMSLRIEGLEGAIFQMLSHGIVSGALFFCVGVVYERYHVRSLKYFGGLTHIYPLFAIVFLIFSLANISFPGTSSFIGEFLILAGTFKETTLVTFFAAFSMILGAVYTL*TYNRIFFGNLKNLSIKKSMDLNRSEAYLFGLLIIILFIMGLYSKLFLNSFHINCVNLL 1290
            LD+SNP FQ    + ++P+LNF++  GIDGISIYF++LT+LFIYLCILSLS    KL E L++LF LQ  I C+FSVLD+LGFFIFFEATLIPI+FIVLI GSR RKVRASYLISIYTL GSIFM FNI+YI+SKTG+T+YQ+LLT+ F +EDQ+FL ITFFIAFAAKIPLFPLHI LPEAHVEAPT+GSVLLA LLLKLGTYG+IRF +PLFP  T+YYTPLIYTF + GIIYTC TAIRQ+DLKKIIAYSSVGHMN VL+GI++LR E +EG+I+QMLSHGIVSGALFFCVGV+Y+R+  R +KY+GGLT+I PL + +FLIFS+ANISFPGTSSF+GEFLILAG FKE++ V F    SM+LGAVYTL  YNRIFFGNLKN +I K  D+N+ E ++F  LIIIL +MG+Y K F+++FH+N +NL+
Sbjct:   21 LDKSNPGFQFQTQIFMIPALNFNILLGIDGISIYFLILTSLFIYLCILSLSNYQTKLRENLMHLFLLQWAISCSFSVLDILGFFIFFEATLIPIFFIVLIWGSRGRKVRASYLISIYTLLGSIFMLFNILYIVSKTGITNYQHLLTITFIEEDQRFLWITFFIAFAAKIPLFPLHIWLPEAHVEAPTIGSVLLAALLLKLGTYGLIRFCLPLFPLATIYYTPLIYTFGICGIIYTCLTAIRQVDLKKIIAYSSVGHMNCVLIGIVTLRTESIEGSIYQMLSHGIVSGALFFCVGVIYDRHGTRFIKYYGGLTNISPLLSTIFLIFSMANISFPGTSSFVGEFLILAGIFKESSWVAFLTMISMVLGAVYTLWVYNRIFFGNLKNNAIIKFTDVNKKELFIFISLIIILLLMGIYPKFFVSTFHVNVLNLI 450          
BLAST of mRNA_L-elsbetiae_contig503.13048.1 vs. uniprot
Match: A0A5B9ILT7_9STRA (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Cafileria marina TaxID=2557541 RepID=A0A5B9ILT7_9STRA)

HSP 1 Score: 528 bits (1359), Expect = 1.730e-182
Identity = 279/422 (66.11%), Postives = 335/422 (79.38%), Query Frame = 1
Query:   13 NPHFQKMFCLELVPSLNFSLAFGIDGISIYFILLTNLFIYLCILSLSPSLNKLYEILLYLFFLQ*GILCAFSVLDLLGFFIFFEATLIPIYFIVLI*GSRERKVRASYLISIYTLFGSIFMFFNIIYILSKTGVTDYQYLLTLVFSKEDQKFL*ITFFIAFAAKIPLFPLHI*LPEAHVEAPTVGSVLLAVLLLKLGTYGIIRFSIPLFPYGTLYYTPLIYTFAVFGIIYTCFTAIRQIDLKKIIAYSSVGHMNVVLLGIMSLRIEGLEGAIFQMLSHGIVSGALFFCVGVVYERYHVRSLKYFGGLTHIYPLFAIVFLIFSLANISFPGTSSFIGEFLILAGTFKETTLVTFFAAFSMILGAVYTL*TYNRIFFGNLKNLSIKKSMDLNRSEAYLFGLLIIILFIMGLYSKLFLNSFHINC 1278
            N  F + F + L+PSL+F +  GIDGIS+ FILLTNLFIYLCI SL     K +EI++YLF LQ  +L AFSVLDL GFFIFFE TLIPIYFIVLI GSRERKVRASYLISIYTLFGSIFMFF I+Y+ SK G T+Y +LL + F K+DQK L + FFIAF+AKIP+FPLHI LPEAHVEAPT+GSVLLAVLLLKLGTYGI+RF +PLFPYGTL ++  +   A+  ++YT   AIRQIDLKKIIAYSSVGHMNVVLLGI++L ++ L+GAIFQMLSHGIVSGALFFCVG  Y+RY VRSLKYFGG    YP+ ++ FLIFSLANISFPGTSSF+GEF+IL G     +L+ F A+ +MI GAVYTL +YNRI FGN KN  +KK++DL+R E Y+F +L+  L +MG++   F +   +NC
Sbjct:   96 NSFFSQKFSIFLIPSLHFDILLGIDGISLLFILLTNLFIYLCIYSLPHYQKKFHEIIIYLFILQWSVLAAFSVLDLFGFFIFFETTLIPIYFIVLIWGSRERKVRASYLISIYTLFGSIFMFFTIMYLYSKVGTTNYIHLLEIEFVKQDQKLLWLCFFIAFSAKIPIFPLHIWLPEAHVEAPTIGSVLLAVLLLKLGTYGILRFCLPLFPYGTLSHSCWVNILAIISVVYTSLIAIRQIDLKKIIAYSSVGHMNVVLLGIITLNVDNLQGAIFQMLSHGIVSGALFFCVGSFYKRYKVRSLKYFGGFMRTYPVLSVFFLIFSLANISFPGTSSFVGEFVILLGLLGNNSLIVFLASINMITGAVYTLWSYNRIAFGNFKNQMLKKNLDLDRIENYIFLILLYFLILMGIFPNTFFDYLQLNC 517          
BLAST of mRNA_L-elsbetiae_contig503.13048.1 vs. uniprot
Match: Q9TAK8_CAFRO (NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=Q9TAK8_CAFRO)

HSP 1 Score: 458 bits (1179), Expect = 2.520e-156
Identity = 252/410 (61.46%), Postives = 305/410 (74.39%), Query Frame = 1
Query:   40 LELVPSLNFSLAFGIDGISIYFILLTNLFIYLCILSLSPSLNKLYEILLYLFFLQ*GILCAFSVLDLLGFFIFFEATLIPIYFIVLI*GSRERKVRASYLISIYTLFGSIFMFFNIIYILSKTGVTDYQYLLTLVFSKEDQKFL*ITFFIAFAAKIPLFPLHI*LPEAHVEAPTVGSVLLAVLLLKLGTYGIIRFSIPLFPYGTLYYTPLIYTFAVFGIIYTCFTAIRQIDLKKIIAYSSVGHMNVVLLGIMSLRIEGLEGAIFQMLSHGIVSGALFFCVGVVYERYHVRSLKYFGGLTHIYPLFAIVFLIFSLANISFPGTSSFIGEFLILAGTFKETTLVTFFAAFSMILGAVYTL*TYNRIFFGNLKNLSIKKSMDLNRSEAYLFGLLIIILFIMGLYSKLFLNSFH 1269
            L L PSLN+ L  G+D +SI+F++L +L IYL +L    + NK Y  L  L  LQ GI  AF V DLLGFFIFFE TLIPIY ++LI GSRERK+RASYLIS+YTLFGSIFMFFNI Y  +K G T++  L+TL F+ ED KFL ITFFIAFAAKIP+ P HI LPEAHVEAPT+GSV+LA LLLKLGTYGI+RF + LFP  TLY++PLI  FA+  I++T  TAIRQIDLKKIIAYSS+GHMNVVLLG++   +E LEG IFQMLSHGI++GALFF VG  Y+RY VRSL+YFGG     PL A  FLIFS+ANISFPGTSSFIGEF+I  G F+  +     A+ +M+ GA YTL   NR+ FGNLK+  I    D+NR E Y+F LL+I++ +MG++    L   H
Sbjct:   34 LILHPSLNYVLPIGVDSLSIWFVILNHLIIYLSLLYTFSTQNKQYGFLYCLLLLQWGIGGAFMVFDLLGFFIFFELTLIPIYLLILIYGSRERKIRASYLISLYTLFGSIFMFFNIFYCFAKFGTTNFFVLMTLDFAPEDAKFLWITFFIAFAAKIPMIPFHIWLPEAHVEAPTIGSVILAALLLKLGTYGILRFLLHLFPEATLYFSPLINVFALISIVFTSMTAIRQIDLKKIIAYSSIGHMNVVLLGMLVPSVESLEGTIFQMLSHGIIAGALFFIVGAFYQRYKVRSLEYFGGFMITAPLLATFFLIFSMANISFPGTSSFIGEFMICFGLFEYNSFAVIIASINMVTGAAYTLWALNRVNFGNLKSQYILSYGDVNRLEFYIFCLLVILMILMGIFPNFILGILH 443          
BLAST of mRNA_L-elsbetiae_contig503.13048.1 vs. uniprot
Match: M4QD44_9EUKA (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Jakoba bahamiensis TaxID=221721 RepID=M4QD44_9EUKA)

HSP 1 Score: 428 bits (1100), Expect = 7.650e-144
Identity = 231/428 (53.97%), Postives = 303/428 (70.79%), Query Frame = 1
Query:    4 DQSNPHFQKMFCLELVPSLNFSLAFGIDGISIYFILLTNLFIYLCILSLSPSL-NKLYEILLYLFFLQ*GILCAFSVLDLLGFFIFFEATLIPIYFIVLI*GSRERKVRASYLISIYTLFGSIFMFFNIIYILSKTGVTDYQYLLTLVFSKEDQKFL*ITFFIAFAAKIPLFPLHI*LPEAHVEAPTVGSVLLAVLLLKLGTYGIIRFSIPLFPYGTLYYTPLIYTFAVFGIIYTCFTAIRQIDLKKIIAYSSVGHMNVVLLGIMSLRIEGLEGAIFQMLSHGIVSGALFFCVGVVYERYHVRSLKYFGGLTHIYPLFAIVFLIFSLANISFPGTSSFIGEFLILAGTFKETTLVTFFAAFSMILGAVYTL*TYNRIFFGNLKNLSIKKSMDLNRSEAYLFGLLIIILFIMGLYSKLFLNSFHINCVN 1284
            D S   FQ +F +  + SLN +   G+DGIS++ +LLT   I LCIL+   S+ N + E ++    L   ++  FSVLDLL F++FFE+ LIP++ ++ + GSRERKVRA+Y++ +YT FGS+ M   I+ +  + G TD Q LLT  FS E Q  L + FF +FA KIP+ P HI LPEAHVEAPT GSVLLA +LLKLG YG+IRFSIPLFPY ++YYTPL+YT ++  IIYT  T +RQIDLK+IIAYSSV HMN V +G+ SL I+GLEGA+  MLSHGIVS ALF C+GV+Y+R+  R LKY+ G+  I P+FA +FLIF++ANIS PGTSSFIGEFL+L G F   T V FFA   +ILGA Y+L  YNR+ FGNLK   I    D+ R E ++F  L+I++F+MG+Y  LFL+  H++  N
Sbjct:   55 DSSVSKFQFIFQIAWIESLNINFLLGVDGISLFLVLLTTFLIPLCILASWESVKNNIKEYMICFLLLDAFLVLIFSVLDLLLFYVFFESVLIPMFIVIGVWGSRERKVRAAYMLFLYTFFGSLLMLVAILVVYFEAGTTDLQVLLTTEFSNERQLLLWLAFFASFAIKIPMVPFHIWLPEAHVEAPTAGSVLLAGVLLKLGGYGLIRFSIPLFPYASVYYTPLVYTMSIVAIIYTSLTTLRQIDLKRIIAYSSVAHMNFVTIGLFSLNIQGLEGAMLLMLSHGIVSSALFLCIGVLYDRHKTRLLKYYSGVVQIMPIFATLFLIFTMANISLPGTSSFIGEFLVLVGVFNSNTTVAFFATTGIILGAAYSLWLYNRVAFGNLKIDYISLYSDVTRREFFIFLPLVILVFVMGIYPDLFLDPMHVSIAN 482          
BLAST of mRNA_L-elsbetiae_contig503.13048.1 vs. uniprot
Match: A0A7T6UZN4_LITUN (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Lithodesmium undulatum TaxID=59812 RepID=A0A7T6UZN4_LITUN)

HSP 1 Score: 427 bits (1097), Expect = 2.650e-143
Identity = 226/410 (55.12%), Postives = 299/410 (72.93%), Query Frame = 1
Query:   49 VPSLNFSLAFGIDGISIYFILLTNLFIYLCILSLSPSLNK-LYEILLYLFFLQ*GILCAFSVLDLLGFFIFFEATLIPIYFIVLI*GSRERKVRASYLISIYTLFGSIFMFFNIIYILSKTGVTDYQYLLTLVFSKEDQKFL*ITFFIAFAAKIPLFPLHI*LPEAHVEAPTVGSVLLAVLLLKLGTYGIIRFSIPLFPYGTLYYTPLIYTFAVFGIIYTCFTAIRQIDLKKIIAYSSVGHMNVVLLGIMSLRIEGLEGAIFQMLSHGIVSGALFFCVGVVYERYHVRSLKYFGGLTHIYPLFAIVFLIFSLANISFPGTSSFIGEFLILAGTFKETTLVTFFAAFSMILGAVYTL*TYNRIFFGNLKNLSIKKSMDLNRSEAYLFGLLIIILFIMGLYSKLFLNSFHIN 1275
            +P+LN +   GIDGISI+FI+LT L I LC L+   +++K L E  L    ++  ++  FSVLDLL F+IFFE+ LIP++ I+ I GSRERK+RA+Y   +YTL GS+ M   I+YI  + G TDY+ LLT  FS ++Q  L + FFI+FAAKIP+ P+H+ LPEAHVEAPT GSV+LA +LLKLGTYG IRFS PLFP    Y+ P +Y+ +V GIIYT FTAIRQ D K+IIAY+SV HMN+V++G+ S  I G+EGAI Q LSHG V+ ALF  +G+VYER+H R +KY+GGL HI P++ I+FL F++ANI  PGTSSF+GEFLILAG+FK  T VTF +A  M+LG  Y+L  +NRI +GN+K   IK  +DLN+ E + F  LI+   I G+Y ++FLNS H++
Sbjct:   76 IPNLNLNFVVGIDGISIFFIILTTLLIPLCFLTSWNTISKNLKEFFLSFLIMEFFLIIVFSVLDLLLFYIFFESVLIPMFLIIGIWGSRERKIRAAYFFFLYTLLGSLLMLLTILYIYYQVGTTDYEILLTFSFSTDEQLLLWLAFFISFAAKIPMVPVHLWLPEAHVEAPTAGSVILAGILLKLGTYGFIRFSFPLFPQACFYFAPFVYSVSVIGIIYTSFTAIRQTDFKRIIAYTSVAHMNLVMVGLFSFNIIGIEGAILQSLSHGFVASALFLIIGIVYERHHTRMVKYYGGLVHIMPIYIIIFLFFTMANIGLPGTSSFVGEFLILAGSFKVNTTVTFLSATGMVLGGCYSLWLFNRIAYGNIKTQYIKTYLDLNKREFFTFLPLILGTLITGIYPEIFLNSIHMS 485          
BLAST of mRNA_L-elsbetiae_contig503.13048.1 vs. uniprot
Match: A0A8A3SRH9_9STRA (NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=Pleurosigma TaxID=197752 RepID=A0A8A3SRH9_9STRA)

HSP 1 Score: 425 bits (1092), Expect = 1.240e-142
Identity = 232/429 (54.08%), Postives = 306/429 (71.33%), Query Frame = 1
Query:    7 QSNPHFQKMFCLELVPSLNFSLAFGIDGISIYFILLTNLFIYLCILSLSPSLN-KLYEILLYLFFLQ*GILCAFSVLDLLGFFIFFEATLIPIYFIVLI*GSRERKVRASYLISIYTLFGSIFMFFNIIYILSKTGVTDYQYLLTLVFSKEDQKFL*ITFFIAFAAKIPLFPLHI*LPEAHVEAPTVGSVLLAVLLLKLGTYGIIRFSIPLFPYGTLYYTPLIYTFAVFGIIYTCFTAIRQIDLKKIIAYSSVGHMNVVLLGIMSLRIEGLEGAIFQMLSHGIVSGALFFCVGVVYERYHVRSLKYFGGLTHIYPLFAIVFLIFSLANISFPGTSSFIGEFLILAGTFKETTLVTFFAAFSMILGAVYTL*TYNRIFFGNLKNLSIKKSMDLNRSEAYLFGLLIIILFIMGLYSKLFLNSFHINCVNLL 1290
            +S  +FQ +  +   P+LN ++  GIDGISI+F+LLT L I +CIL    S+N KL E L+    L+  ++  F +LDLL F+IFFE+ LIP++ I+ + GSR+RK+ A+Y   +YTL GS+ M  +I+YI  + G TDY+ LLT  FS+ +QK L +TFFI+FAAK+P+ P+H+ LPEAHVEAPT GSV+LA +LLKLGTYG IRF+IPL P  + Y+TPL+YT A  GIIYT FTAIRQ D K+IIAY+S+ HMN+V+LGI S  + GLEGA+FQ LSHG V+ ALF  +GVVYERYH R +KY+GGL  + PL+  +FL F+LANISFPGTSSF GEFLIL G+FK  T VTF  A  +I+G  Y+L  +NRI FGNLK    KK +D+N+ E   F  LII   + G+   +FL + H +  NL+
Sbjct:   56 KSLANFQFVTKIFWFPNLNLNITLGIDGISIFFLLLTTLLIPICILISWNSINYKLKEYLISFLMLEFLLIGVFCILDLLLFYIFFESVLIPMFLIIGVWGSRDRKILAAYYFFLYTLLGSVLMLLSILYIYYQVGTTDYEVLLTFSFSESEQKILWLTFFISFAAKVPMVPVHLWLPEAHVEAPTAGSVILAGVLLKLGTYGFIRFTIPLLPQASFYFTPLVYTIAAVGIIYTSFTAIRQSDFKRIIAYTSIAHMNLVMLGIFSFNVIGLEGALFQSLSHGFVASALFLIIGVVYERYHTRLVKYYGGLAVVMPLYITIFLFFTLANISFPGTSSFAGEFLILVGSFKANTSVTFLGATGVIIGGCYSLWLFNRIAFGNLKTQYTKKFIDINKREFLAFLPLIIGTLVTGILPDIFLTTMHTSVNNLI 484          
BLAST of mRNA_L-elsbetiae_contig503.13048.1 vs. uniprot
Match: Q3S2A3_THAPS (NADH-ubiquinone oxidoreductase chain 4 n=9 Tax=Thalassiosirales TaxID=33847 RepID=Q3S2A3_THAPS)

HSP 1 Score: 424 bits (1091), Expect = 2.360e-142
Identity = 225/424 (53.07%), Postives = 306/424 (72.17%), Query Frame = 1
Query:   22 FQKMFCLELVPSLNFSLAFGIDGISIYFILLTNLFIYLCIL-SLSPSLNKLYEILLYLFFLQ*GILCAFSVLDLLGFFIFFEATLIPIYFIVLI*GSRERKVRASYLISIYTLFGSIFMFFNIIYILSKTGVTDYQYLLTLVFSKEDQKFL*ITFFIAFAAKIPLFPLHI*LPEAHVEAPTVGSVLLAVLLLKLGTYGIIRFSIPLFPYGTLYYTPLIYTFAVFGIIYTCFTAIRQIDLKKIIAYSSVGHMNVVLLGIMSLRIEGLEGAIFQMLSHGIVSGALFFCVGVVYERYHVRSLKYFGGLTHIYPLFAIVFLIFSLANISFPGTSSFIGEFLILAGTFKETTLVTFFAAFSMILGAVYTL*TYNRIFFGNLKNLSIKKSMDLNRSEAYLFGLLIIILFIMGLYSKLFLNSFHINCVNLL 1290
            FQ +  L  +P LN + + GIDGIS++FILLT L I+LCIL S +     + E L+    ++  ++  FS+LDLL F+I+FE+ LIP+Y IV I GSRERK+RA+Y   +YTL GS+ M  +I+YI  + G TDY+ LLT +FSK +QKFL ++FF +FA K+P+ P+H+ LPEAHVEAPT GSV+LA +LLKLGTYG +RFS PLFP  + Y+ P++Y  +V GI+YT FTAIRQ D K+IIAY+SV HMN+V++G+ S    GLEGAI Q LSHG V+ ALF  +GVVYER+H R +KY+GGL H+ PL+  +FL F+++NI  PGT SF+GEFLIL G+FK  T  TF +A  MI+G  Y+L  +NRI +GNLK   +K  +D+N+ E ++F  LI     +GLY ++FLNS H++ VN+L
Sbjct:   67 FQFVSKLLWIPFLNLNFSLGIDGISLFFILLTTLLIFLCILISWNSVKTNIKEFLIAFLVMEFFLIGVFSILDLLLFYIYFESVLIPMYLIVGIWGSRERKIRAAYFFFLYTLLGSVLMLLSILYIYYQVGTTDYEVLLTFIFSKTEQKFLWLSFFGSFATKVPMVPVHLWLPEAHVEAPTAGSVILAGVLLKLGTYGFLRFSFPLFPEASFYFAPIVYLLSVVGIVYTSFTAIRQTDFKRIIAYTSVAHMNLVMVGLFSFNTIGLEGAILQSLSHGFVASALFLIIGVVYERHHTRMVKYYGGLVHVMPLYTFIFLFFTMSNIGLPGTGSFVGEFLILVGSFKTNTSATFISATGMIIGGCYSLWLFNRISYGNLKTQYLKDYIDINKREFFIFLPLIFGTIAIGLYPEIFLNSMHMS-VNML 489          
BLAST of mRNA_L-elsbetiae_contig503.13048.1 vs. uniprot
Match: I6N5T2_9STRA (NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=Bacillariophycidae TaxID=33850 RepID=I6N5T2_9STRA)

HSP 1 Score: 424 bits (1089), Expect = 4.280e-142
Identity = 232/423 (54.85%), Postives = 301/423 (71.16%), Query Frame = 1
Query:   22 FQKMFCLELVPSLNFSLAFGIDGISIYFILLTNLFIYLCILSLSPSLNK-LYEILLYLFFLQ*GILCAFSVLDLLGFFIFFEATLIPIYFIVLI*GSRERKVRASYLISIYTLFGSIFMFFNIIYILSKTGVTDYQYLLTLVFSKEDQKFL*ITFFIAFAAKIPLFPLHI*LPEAHVEAPTVGSVLLAVLLLKLGTYGIIRFSIPLFPYGTLYYTPLIYTFAVFGIIYTCFTAIRQIDLKKIIAYSSVGHMNVVLLGIMSLRIEGLEGAIFQMLSHGIVSGALFFCVGVVYERYHVRSLKYFGGLTHIYPLFAIVFLIFSLANISFPGTSSFIGEFLILAGTFKETTLVTFFAAFSMILGAVYTL*TYNRIFFGNLKNLSIKKSMDLNRSEAYLFGLLIIILFIMGLYSKLFLNSFHINCVNL 1287
            FQ +  L  +P +N ++  GIDGIS++F+LLT L I LCIL    S+N  L   L+    ++  ++  F VLDLL F+IFFE+ LIP++ +V I GSRERK+ ASY   +YTL GS+ M  +I+YI ++ G TDY+ LLT VFS  +QK L  TFF+AFAAK+P+ P+H+ LPEAHVEAPT GSV+LA +LLKLGTYG IRFS+PLFP  + Y+TP +YT ++ GI+Y   TAIRQ D K+IIAY+SV HMNVV+LGI S    G+EGAI Q LSHG V+ ALF  +GVVYERY  R +KY+GGL H  PL+  VFL F++ANI FPGTS FIGEFLI AG+FK  + +TFF A  MILG  Y L  +NRI +GNLK+  IK+++DLN+ E ++F  LI    I+GL   + LNS H++  NL
Sbjct:   67 FQFVTTLLWIPVINLNINLGIDGISLFFLLLTTLLIPLCILISWNSINSNLKGYLISFLIIEFFLIGVFCVLDLLMFYIFFESILIPMFLVVGIWGSRERKMLASYYFFLYTLLGSVVMLLSILYIYNQVGTTDYEILLTFVFSDFEQKILWFTFFLAFAAKVPMMPVHLWLPEAHVEAPTAGSVILAGVLLKLGTYGFIRFSLPLFPQASFYFTPFVYTISLLGIVYASLTAIRQTDFKRIIAYTSVAHMNVVMLGIFSFNNVGIEGAILQSLSHGFVASALFVIIGVVYERYRTRLVKYYGGLVHTMPLYISVFLFFTMANIGFPGTSGFIGEFLIFAGSFKVNSSITFFGATGMILGGCYALWLFNRIAYGNLKSQYIKQTLDLNKREVFIFVPLICYTLILGLTPDICLNSIHMSVNNL 489          
BLAST of mRNA_L-elsbetiae_contig503.13048.1 vs. uniprot
Match: A0A8A6KJY2_9STRA (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A8A6KJY2_9STRA)

HSP 1 Score: 423 bits (1088), Expect = 6.070e-142
Identity = 222/423 (52.48%), Postives = 300/423 (70.92%), Query Frame = 1
Query:    4 DQSNPHFQKMFCLELVPSLNFSLAFGIDGISIYFILLTNLFIYLCILSLSPSLN-KLYEILLYLFFLQ*GILCAFSVLDLLGFFIFFEATLIPIYFIVLI*GSRERKVRASYLISIYTLFGSIFMFFNIIYILSKTGVTDYQYLLTLVFSKEDQKFL*ITFFIAFAAKIPLFPLHI*LPEAHVEAPTVGSVLLAVLLLKLGTYGIIRFSIPLFPYGTLYYTPLIYTFAVFGIIYTCFTAIRQIDLKKIIAYSSVGHMNVVLLGIMSLRIEGLEGAIFQMLSHGIVSGALFFCVGVVYERYHVRSLKYFGGLTHIYPLFAIVFLIFSLANISFPGTSSFIGEFLILAGTFKETTLVTFFAAFSMILGAVYTL*TYNRIFFGNLKNLSIKKSMDLNRSEAYLFGLLIIILFIMGLYSKLFLNSFH 1269
            D+S  HFQ M     +P LN +   G+DGIS++ I+LT+L I+LC+L+   S+   + E LL    ++  +LC FS++D+  F++FFE+ LIP+Y I+ I GSRERK+RA+Y   +YTL GSI M  +I+YI S  G T+Y+ +LT  F++ +QK L +TFF +FA K+P+ P+HI LPEAHVEAPT GSV+LA +LLKLGTYG IRFSIPLFP  + +++PL+Y  A  GIIYT FTAIRQ D K+IIAY+SV HMN+V+LGI S  + G+EG++ Q LSHG V+ +LF  +GVVYER H R +KY+GGL HI P++  +FL F++ANI  PGTSSFIGEFLIL G + +TT + FFAA SM+LG  Y+L  +NRI +GNLK   +  S DLN  E  +F  L+I    +G+Y  + LN  H
Sbjct:   62 DKSIGHFQLMHISYWIPFLNINFVTGVDGISLFLIILTSLLIFLCLLNSWNSVQTNVKEYLLCFLIMELFLLCVFSIIDVFLFYVFFESVLIPMYLIIGIWGSRERKIRANYFFFLYTLLGSILMLLSILYIYSSVGTTNYEIILTTFFTETEQKILWLTFFASFATKVPMLPMHIWLPEAHVEAPTAGSVILAGVLLKLGTYGFIRFSIPLFPKASFFFSPLVYAVATIGIIYTSFTAIRQTDFKRIIAYTSVAHMNLVVLGIFSFNVIGIEGSLLQSLSHGFVASSLFLIIGVVYERTHTRMVKYYGGLVHIMPIYIAIFLFFTMANIGLPGTSSFIGEFLILLGCYNQTTTICFFAATSMVLGGCYSLWLFNRIAYGNLKTQYLSTSYDLNSREFLIFLPLLISTLFVGIYPDVLLNPIH 484          
BLAST of mRNA_L-elsbetiae_contig503.13048.1 vs. uniprot
Match: D2Z201_9STRA (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Chattonella marina TaxID=90936 RepID=D2Z201_9STRA)

HSP 1 Score: 422 bits (1086), Expect = 1.100e-141
Identity = 229/432 (53.01%), Postives = 300/432 (69.44%), Query Frame = 1
Query:    4 DQSNPHFQKMFCLELVPSLNFSLAFGIDGISIYFILLTNLFIYLCILSLSPSLNK-LYEILLYLFFLQ*GILCAFSVLDLLGFFIFFEATLIPIYFIVLI*GSRERKVRASYLISIYTLFGSIFMFFNIIYILSKTGVTDYQYLLTLVFSKEDQKFL*ITFFIAFAAKIPLFPLHI*LPEAHVEAPTVGSVLLAVLLLKLGTYGIIRFSIPLFPYGTLYYTPLIYTFAVFGIIYTCFTAIRQIDLKKIIAYSSVGHMNVVLLGIMSLRIEGLEGAIFQMLSHGIVSGALFFCVGVVYERYHVRSLKYFGGLTHIYPLFAIVFLIFSLANISFPGTSSFIGEFLILAGTFKETTLVTFFAAFSMILGAVYTL*TYNRIFFGNLKN--LSIKKSMDLNRSEAYLFGLLIIILFIMGLYSKLFLNSFHINCVNLL 1290
            DQS   FQ +       S N +  FG+DGIS++ ILLT L   LCIL    S+ K + E LL    ++  ++C F VLDLL F+IFFE  LIP++ ++ I GSRERK+RA+YL  +YTLFGS+FM   I+YI  KTG T+Y+ LLT  FS  +QK L + FF +F  K+P+ P HI LPEAHVEAPT GSV+LA LLLKLGTYG +RFS+PLFP  + Y+TPL+YT A  G+IYT FTAIRQ DLK+IIAYSSV HMN+V++G+ S  + GLEG++ Q LSHG VS ALF C+G++Y+RYH R +KY+ GL H+ PL  I+ L F++ANI  PGTSSF+GEFLILAG ++  T VT      M+LG  Y+L  YNR+ +GNLK   L + K  D+ ++E +    LII   +MGLY ++FL+S H++   LL
Sbjct:   56 DQSTAKFQFVVNFPWFSSFNINCTFGVDGISLFLILLTTLLFPLCILGSWYSIQKRIKEYLLCFLLMEAFLICVFCVLDLLLFYIFFEGVLIPMFVLIGIWGSRERKIRAAYLFFLYTLFGSLFMLLAILYIFVKTGTTNYEILLTTSFSSFEQKVLWLAFFASFGTKVPMVPFHIWLPEAHVEAPTPGSVILAGLLLKLGTYGFLRFSLPLFPEASFYFTPLVYTMATLGVIYTSFTAIRQSDLKRIIAYSSVAHMNLVMMGLFSFNLPGLEGSLLQSLSHGFVSSALFLCIGILYDRYHTRLVKYYSGLVHVMPLSMIILLFFTMANIGLPGTSSFVGEFLILAGIYQTNTTVTLLGGTGMVLGGGYSLWLYNRLAYGNLKTQYLGMTKFSDIKKNEFFSVFPLIIGTLVMGLYPEIFLDSMHMSINQLL 487          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig503.13048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E9XPS8_9RICK1.700e-20671.16NADH-quinone oxidoreductase subunit M n=1 Tax=Rick... [more]
A0A5B9ILT7_9STRA1.730e-18266.11NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Caf... [more]
Q9TAK8_CAFRO2.520e-15661.46NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=Caf... [more]
M4QD44_9EUKA7.650e-14453.97NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Jak... [more]
A0A7T6UZN4_LITUN2.650e-14355.12NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Lit... [more]
A0A8A3SRH9_9STRA1.240e-14254.08NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=Ple... [more]
Q3S2A3_THAPS2.360e-14253.07NADH-ubiquinone oxidoreductase chain 4 n=9 Tax=Tha... [more]
I6N5T2_9STRA4.280e-14254.85NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=Bac... [more]
A0A8A6KJY2_9STRA6.070e-14252.48NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Rhi... [more]
D2Z201_9STRA1.100e-14153.01NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Cha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig503contigL-elsbetiae_contig503:19693..20982 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score130.2
Seed ortholog evalue6.3e-28
Seed eggNOG ortholog1123059.KB823011_gene1329
Preferred namenuoM
KEGG rclassRC00061
KEGG koko:K00342
KEGG TC3.D.1
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,map00190,map01100
KEGG ModuleM00144
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
EggNOG free text desc.NADH ubiquinone oxidoreductase subunit
EggNOG OGs1MV7V@1224,2TSNK@28211,43WV9@69657,COG1008@1,COG1008@2
EC1.6.5.3
COG Functional cat.C
Best tax levelHyphomonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size1290
Cds size348
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig503.13048.1prot_L-elsbetiae_contig503.13048.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig503 20461..20808 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816507.9081492-UTR-L-elsbetiae_contig503:19692..204601622816507.9081492-UTR-L-elsbetiae_contig503:19692..20460Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig503 19693..20460 +
1691683610.1149788-UTR-L-elsbetiae_contig503:19692..204601691683610.1149788-UTR-L-elsbetiae_contig503:19692..20460Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig503 19693..20460 +
1622816507.936696-UTR-L-elsbetiae_contig503:20808..209821622816507.936696-UTR-L-elsbetiae_contig503:20808..20982Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig503 20809..20982 +
1691683610.145351-UTR-L-elsbetiae_contig503:20808..209821691683610.145351-UTR-L-elsbetiae_contig503:20808..20982Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig503 20809..20982 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816507.9212506-CDS-L-elsbetiae_contig503:20460..208081622816507.9212506-CDS-L-elsbetiae_contig503:20460..20808Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig503 20461..20808 +
1691683610.1359804-CDS-L-elsbetiae_contig503:20460..208081691683610.1359804-CDS-L-elsbetiae_contig503:20460..20808Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig503 20461..20808 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig503.13048.1

>prot_L-elsbetiae_contig503.13048.1 ID=prot_L-elsbetiae_contig503.13048.1|Name=mRNA_L-elsbetiae_contig503.13048.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=116bp
MNVVLLGIMSLRIEGLEGAIFQMLSHGIVSGALFFCVGVVYERYHVRSLK
YFGGLTHIYPLFAIVFLIFSLANISFPGTSSFIGEFLILAGTFKETTLVT
FFAAFSMILGAVYTL*
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mRNA from alignment at L-elsbetiae_contig503:19693..20982+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig503.13048.1 ID=mRNA_L-elsbetiae_contig503.13048.1|Name=mRNA_L-elsbetiae_contig503.13048.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1290bp|location=Sequence derived from alignment at L-elsbetiae_contig503:19693..20982+ (Laminarionema elsbetiae ELsaHSoW15)
TTAGATCAAAGTAATCCTCATTTTCAAAAAATGTTTTGTTTAGAATTAGT GCCTTCTTTAAACTTTTCATTAGCATTTGGAATTGATGGTATTTCAATTT ATTTTATTCTATTAACAAATTTATTTATTTATTTATGTATTTTAAGCTTA TCTCCTTCTTTAAATAAATTGTATGAAATATTACTGTATTTATTTTTTTT ACAATGAGGTATTTTATGTGCTTTTAGTGTTTTAGATTTATTAGGATTTT TTATTTTTTTTGAAGCGACTTTAATTCCAATTTATTTCATTGTTTTAATT TGAGGTTCAAGAGAACGTAAAGTTCGTGCTAGTTATTTAATTTCTATTTA TACTTTATTTGGTTCTATTTTTATGTTTTTTAATATAATTTATATACTAT CCAAAACTGGTGTAACTGATTACCAATATTTACTAACCTTAGTTTTTTCA AAAGAAGATCAAAAATTTCTTTGAATAACTTTTTTTATAGCTTTTGCAGC TAAAATACCTTTATTTCCTTTACATATTTGATTACCTGAAGCTCATGTAG AAGCTCCTACTGTAGGTTCTGTGCTTTTAGCGGTCTTATTATTAAAATTA GGTACTTATGGAATAATACGTTTTTCTATACCATTATTTCCTTATGGAAC TCTTTATTACACCCCTTTAATTTATACTTTTGCTGTTTTTGGTATCATTT ATACTTGTTTTACAGCAATCCGTCAAATTGATTTAAAAAAAATTATCGCA TATTCTTCTGTCGGACATATGAATGTAGTTTTATTAGGAATAATGAGTTT ACGTATAGAAGGTTTAGAAGGAGCTATTTTTCAAATGTTAAGTCATGGTA TAGTTTCAGGTGCTTTATTCTTTTGTGTTGGTGTAGTATATGAACGTTAT CATGTAAGATCATTAAAATATTTTGGAGGGTTAACTCATATTTACCCGTT ATTTGCTATAGTATTTTTAATTTTCTCATTAGCTAATATTAGTTTTCCAG GTACTAGTAGTTTTATAGGAGAATTTTTAATATTAGCGGGTACATTCAAA GAGACTACTTTAGTCACTTTTTTTGCTGCTTTTAGTATGATATTGGGTGC TGTGTATACTTTATGAACTTATAATAGAATATTTTTTGGTAATTTAAAAA ATTTATCTATTAAAAAATCTATGGATTTAAACAGAAGTGAAGCTTATTTA TTTGGGCTTTTGATTATCATCTTATTTATAATGGGATTATATTCAAAACT ATTTTTAAATAGTTTTCATATTAACTGTGTGAATTTATTA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig503:19693..20982+

>mRNA_L-elsbetiae_contig503.13048.1 ID=mRNA_L-elsbetiae_contig503.13048.1|Name=mRNA_L-elsbetiae_contig503.13048.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=696bp|location=Sequence derived from alignment at L-elsbetiae_contig503:19693..20982+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAATGTAGTTTTATTAGGAATAATGAGTTTACGTATAGAAGGTTTAGA
AGGAGCTATTTTTCAAATGTTAAGTCATGGTATAGTTTCAGGTGCTTTAT
TCTTTTGTGTTGGTGTAGTATATGAACGTTATCATGTAAGATCATTAAAA
TATTTTGGAGGGTTAACTCATATTTACCCGTTATTTGCTATAGTATTTTT
AATTTTCTCATTAGCTAATATTAGTTTTCCAGGTACTAGTAGTTTTATAG
GAGAATTTTTAATATTAGCGGGTACATTCAAAGAGACTACTTTAGTCACT
TTTTTTGCTGCTTTTAGTATGATATTGGGTGCTGTGTATACTTTATGAAT
GAATGTAGTTTTATTAGGAATAATGAGTTTACGTATAGAAGGTTTAGAAG
GAGCTATTTTTCAAATGTTAAGTCATGGTATAGTTTCAGGTGCTTTATTC
TTTTGTGTTGGTGTAGTATATGAACGTTATCATGTAAGATCATTAAAATA
TTTTGGAGGGTTAACTCATATTTACCCGTTATTTGCTATAGTATTTTTAA
TTTTCTCATTAGCTAATATTAGTTTTCCAGGTACTAGTAGTTTTATAGGA
GAATTTTTAATATTAGCGGGTACATTCAAAGAGACTACTTTAGTCACTTT
TTTTGCTGCTTTTAGTATGATATTGGGTGCTGTGTATACTTTATGA
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