mRNA_L-elsbetiae_contig503.13047.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: A0A5B9IT22_9STRA (Cytochrome c oxidase subunit 3 n=1 Tax=Cafileria marina TaxID=2557541 RepID=A0A5B9IT22_9STRA) HSP 1 Score: 275 bits (702), Expect = 9.090e-91 Identity = 132/180 (73.33%), Postives = 154/180 (85.56%), Query Frame = 1 Query: 1 RDVVREATFEGHHNSYVRKGLKMGMILFIVSEVMFFFAFF*AFFHSSLNPTLEIGCV*PPKGIIPLNP*HVPLLNTFVLVTSGAYIT*AHYAILAGYRRESIHALFFTIVLALFFTVLQAFEYCVAPFNISDSVYGSVFYMTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECA 540 RDV+RE+TFEG+H SYVR GLKMGMILFI SE M FFAFF AFFHSSLNPTL++G + PPKGI LNP HVPLLNTFVL+ SGA++T AHYA+LAG RR++I AL +T++LALFFT+LQAFEY A FNISD +YGSVFYMTTGLHG+HVLIG++FLIVCL R +HHFT HH+GFE A Sbjct: 62 RDVIRESTFEGNHTSYVRTGLKMGMILFIASEAMLFFAFFWAFFHSSLNPTLDLGSIWPPKGINALNPFHVPLLNTFVLLNSGAFVTWAHYALLAGLRRQTISALIYTVILALFFTLLQAFEYLGASFNISDGIYGSVFYMTTGLHGTHVLIGSLFLIVCLIRLINHHFTKKHHIGFESA 241
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: Q9TAK6_CAFRO (Cytochrome c oxidase subunit 3 n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=Q9TAK6_CAFRO) HSP 1 Score: 257 bits (657), Expect = 7.340e-84 Identity = 128/180 (71.11%), Postives = 145/180 (80.56%), Query Frame = 1 Query: 1 RDVVREATFEGHHNSYVRKGLKMGMILFIVSEVMFFFAFF*AFFHSSLNPTLEIGCV*PPKGIIPLNP*HVPLLNTFVLVTSGAYIT*AHYAILAGYRRESIHALFFTIVLALFFTVLQAFEYCVAPFNISDSVYGSVFYMTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECA 540 RDVVREATFEG H S+VR GLKMGM+LFIVSE M FFAFF FFH+SLNP EIGCV PPKGI LNP HVP LNT VLV SGA +T AHY++LAG RR++I AL FTI+LA+FFT LQA+EY APF +SD+VYGSVF+MTTGLHG HV+IGT+FL VCL R +HH T HVGFE A Sbjct: 65 RDVVREATFEGQHTSFVRSGLKMGMVLFIVSEAMLFFAFFWGFFHASLNPVPEIGCVWPPKGIEALNPFHVPFLNTLVLVHSGAMVTWAHYSVLAGNRRDAISALIFTILLAVFFTFLQAYEYVNAPFGLSDNVYGSVFFMTTGLHGFHVIIGTLFLAVCLIRLITHHLTKKIHVGFEAA 244
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: A0A2E9XPS3_9RICK (Cytochrome-c oxidase n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E9XPS3_9RICK) HSP 1 Score: 244 bits (622), Expect = 4.980e-78 Identity = 120/180 (66.67%), Postives = 139/180 (77.22%), Query Frame = 1 Query: 1 RDVVREATFEGHHNSYVRKGLKMGMILFIVSEVMFFFAFF*AFFHSSLNPTLEIGCV*PPKGIIPLNP*HVPLLNTFVLVTSGAYIT*AHYAILAGYRRESIHALFFTIVLALFFTVLQAFEYCVAPFNISDSVYGSVFYMTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECA 540 RDVVREATFEG H YV GLK GM+LFI+SEVM FFAFF FFHSSLNPTLEIG V PP GI P++ +PLLNT +L+TSGA +T AHY ++AGYR++ I FT++LA FT+ Q +EY A F ISDS YGS FYM TGLHG HVLIGTIFL+VC FRH S HFT +HH+GFECA Sbjct: 89 RDVVREATFEGLHTFYVITGLKKGMVLFILSEVMLFFAFFWGFFHSSLNPTLEIGSVWPPIGIEPMDTWGIPLLNTIILLTSGATVTWAHYGLVAGYRKQVILGFIFTVILATIFTLFQLYEYIHATFTISDSSYGSCFYMATGLHGFHVLIGTIFLLVCFFRHLSFHFTRSHHIGFECA 268
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: F1DPL7_COCSC (Cytochrome c oxidase subunit 3 n=3 Tax=Trebouxiophyceae TaxID=75966 RepID=F1DPL7_COCSC) HSP 1 Score: 239 bits (611), Expect = 5.270e-77 Identity = 118/181 (65.19%), Postives = 140/181 (77.35%), Query Frame = 1 Query: 1 RDVVREATFEGHHNSYVRKGLKMGMILFIVSEVMFFFAFF*AFFHSSLNPTLEIGCV*PPKGIIPLNP*HVPLLNTFVLVTSGAYIT*AHYAILAGYRRESIHALFFTIVLALFFTVLQAFEYCVAPFNISDSVYGSVFYMTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECAS 543 RDVVRE+T++GHH V+ GL+ GMILFIVSE+MFF AFF AFFHSSL PT+EIG V PPKGI LNP VP LNT +L++SGA +T AH+AILAG+R + I AL T++LAL FT QA+EY APF I+D VYGS FY+ TG HG HV++GTIFL VCLFR SHHFT HH GFE A+ Sbjct: 59 RDVVRESTYQGHHTVAVQLGLRYGMILFIVSEIMFFLAFFWAFFHSSLAPTVEIGAVWPPKGIQVLNPWEVPFLNTIILLSSGASVTWAHHAILAGHREQGIAALLITVLLALVFTGFQAYEYLEAPFTIADGVYGSTFYLATGFHGFHVIVGTIFLTVCLFRLLSHHFTKKHHFGFEAAA 239
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: A0A7H0DGD7_9PLEU (Cytochrome c oxidase subunit 3 n=3 Tax=Cynoglossus TaxID=106173 RepID=A0A7H0DGD7_9PLEU) HSP 1 Score: 236 bits (602), Expect = 1.190e-75 Identity = 114/181 (62.98%), Postives = 139/181 (76.80%), Query Frame = 1 Query: 1 RDVVREATFEGHHNSYVRKGLKMGMILFIVSEVMFFFAFF*AFFHSSLNPTLEIGCV*PPKGIIPLNP*HVPLLNTFVLVTSGAYIT*AHYAILAGYRRESIHALFFTIVLALFFTVLQAFEYCVAPFNISDSVYGSVFYMTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECAS 543 RDV RE TF+GHH + V+KGL+ GMILFIVSEV+FF FF AF+HSSL PT E+G PP GIIPLNP VPLLNT VL+ SG +T AH++I+AG R+++IHALFFTI L +FT+LQA EY APF I+D VYGS F++ TG HG HV+IG+ FL+VCL R +HFT THH GFE A+ Sbjct: 59 RDVTREGTFQGHHTTSVQKGLRYGMILFIVSEVLFFLGFFWAFYHSSLAPTPELGGAWPPSGIIPLNPFEVPLLNTAVLLASGVTVTWAHHSIVAGERKQAIHALFFTIALGAYFTLLQALEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLLVCLLRQIRYHFTSTHHFGFEAAA 239
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: A0A650BY10_9CHLO (Cytochrome c oxidase subunit 3 n=1 Tax=Ostreobium quekettii TaxID=121088 RepID=A0A650BY10_9CHLO) HSP 1 Score: 236 bits (601), Expect = 1.680e-75 Identity = 114/181 (62.98%), Postives = 139/181 (76.80%), Query Frame = 1 Query: 1 RDVVREATFEGHHNSYVRKGLKMGMILFIVSEVMFFFAFF*AFFHSSLNPTLEIGCV*PPKGIIPLNP*HVPLLNTFVLVTSGAYIT*AHYAILAGYRRESIHALFFTIVLALFFTVLQAFEYCVAPFNISDSVYGSVFYMTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECAS 543 RD++REATFEGHH V+ GL+ GMILFI SEVMFF +FF AFFHSSL PT+EIG V PPKGI LNP +P LNT +L++SGA +T AH+AILAGYR+++I++L TI+LA+ FT Q +EY APF +S +YGS FYM TG HG+HVLIGT FLIVCL R + HFT HH GFE A+ Sbjct: 59 RDIIREATFEGHHTKAVQIGLRYGMILFIASEVMFFLSFFWAFFHSSLAPTVEIGAVWPPKGIQVLNPWEIPFLNTLILLSSGAAVTWAHHAILAGYRKQAIYSLCVTILLAILFTGFQGYEYLSAPFTLSSGIYGSTFYMATGFHGTHVLIGTTFLIVCLIREINFHFTKHHHFGFEAAA 239
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: Q9TC89_NEPOL (Cytochrome c oxidase subunit 3 n=1 Tax=Nephroselmis olivacea TaxID=31312 RepID=Q9TC89_NEPOL) HSP 1 Score: 236 bits (601), Expect = 1.970e-75 Identity = 118/181 (65.19%), Postives = 138/181 (76.24%), Query Frame = 1 Query: 1 RDVVREATFEGHHNSYVRKGLKMGMILFIVSEVMFFFAFF*AFFHSSLNPTLEIGCV*PPKGIIPLNP*HVPLLNTFVLVTSGAYIT*AHYAILAGYRRESIHALFFTIVLALFFTVLQAFEYCVAPFNISDSVYGSVFYMTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECAS 543 RD+VREATFEG H V+ GL+ GMILFIVSEVMFF AFF AFFHSSL PT+E+G V PPKGI LNP VP LNT +L++SGA +T AH+AIL+GYRR++I +L TI+LA+FFT LQ EY APF ISD VYGS F++ TG HG HV IGT+FL VCLFR HFT HH GFE A+ Sbjct: 63 RDIVREATFEGQHTQVVQIGLRWGMILFIVSEVMFFVAFFWAFFHSSLAPTIELGAVWPPKGIEVLNPWEVPFLNTVILLSSGASVTWAHHAILSGYRRQAIVSLIVTILLAVFFTSLQVMEYIEAPFTISDGVYGSTFFLATGFHGFHVFIGTVFLTVCLFRALDFHFTRKHHFGFEAAA 243
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: A0A097P607_CHLVA (Cytochrome c oxidase subunit 3 n=10 Tax=Chlorella clade TaxID=2511126 RepID=A0A097P607_CHLVA) HSP 1 Score: 235 bits (600), Expect = 2.460e-75 Identity = 115/181 (63.54%), Postives = 143/181 (79.01%), Query Frame = 1 Query: 1 RDVVREATFEGHHNSYVRKGLKMGMILFIVSEVMFFFAFF*AFFHSSLNPTLEIGCV*PPKGIIPLNP*HVPLLNTFVLVTSGAYIT*AHYAILAGYRRESIHALFFTIVLALFFTVLQAFEYCVAPFNISDSVYGSVFYMTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECAS 543 RDVVREATFEGHH + V+ GL+ GMILFI++E++ F AFF AFFHSSL PT+EIG + PPKGI LNP +P LNT +L++SGA +T AH+AILAG R+++I+ L TIVLA+ FT QA+EY APF ISD +YGS FYM TGLHG HV++GTIFL VCLFR +++HFT HH GFE A+ Sbjct: 59 RDVVREATFEGHHTTPVQLGLRYGMILFILTEILLFAAFFWAFFHSSLAPTVEIGAIWPPKGIEVLNPWEIPFLNTVLLLSSGASVTWAHHAILAGNRQQAINGLILTIVLAVIFTGFQAYEYIEAPFTISDGIYGSTFYMATGLHGFHVIMGTIFLTVCLFRLYNYHFTKQHHFGFEAAA 239
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: A0A2H4UY06_9CHLO (Cytochrome c oxidase subunit 3 n=1 Tax=Picochlorum sp. 'soloecismus' TaxID=2053932 RepID=A0A2H4UY06_9CHLO) HSP 1 Score: 235 bits (600), Expect = 2.460e-75 Identity = 113/181 (62.43%), Postives = 141/181 (77.90%), Query Frame = 1 Query: 1 RDVVREATFEGHHNSYVRKGLKMGMILFIVSEVMFFFAFF*AFFHSSLNPTLEIGCV*PPKGIIPLNP*HVPLLNTFVLVTSGAYIT*AHYAILAGYRRESIHALFFTIVLALFFTVLQAFEYCVAPFNISDSVYGSVFYMTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECAS 543 RDV+RE TF+G+H V+ GL+ G++LFIVSE+MFF AFF AFFHSSL+PT++IGCV PPKGI ++P +PLLNT +L+TSGA +T AH+AILAG RE I AL +T+VLA FT QA+EY APF +SD +YGS FYM TG HG HV+IGT+FL VCL+R HH+T HHVGFE A+ Sbjct: 59 RDVIREGTFQGYHTKEVQIGLRYGILLFIVSEIMFFLAFFWAFFHSSLSPTVDIGCVWPPKGIEVIDPWEIPLLNTMLLLTSGASVTWAHHAILAGKSREGIIALMYTVVLAFIFTGFQAYEYLEAPFTLSDGIYGSTFYMATGFHGFHVMIGTLFLSVCLYRLRQHHYTAGHHVGFEAAA 239
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: C5H0F9_CYNSE (Cytochrome c oxidase subunit 3 n=5 Tax=Cynoglossus TaxID=106173 RepID=C5H0F9_CYNSE) HSP 1 Score: 234 bits (598), Expect = 4.790e-75 Identity = 112/181 (61.88%), Postives = 139/181 (76.80%), Query Frame = 1 Query: 1 RDVVREATFEGHHNSYVRKGLKMGMILFIVSEVMFFFAFF*AFFHSSLNPTLEIGCV*PPKGIIPLNP*HVPLLNTFVLVTSGAYIT*AHYAILAGYRRESIHALFFTIVLALFFTVLQAFEYCVAPFNISDSVYGSVFYMTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECAS 543 RDV+RE TF+GHH V+KGL+ GMILFI+SEV+FF FF AF+HSSL PT E+G + PP GI PLNP VPLLNT VL+ SG +T AH++I+AG R+ +IHALF TI L +FT+LQA EY APF I+D VYGS F++ TG HG HV+IG+ FL+VCL R ++HFTPTHH GFE A+ Sbjct: 59 RDVIREGTFQGHHTGPVQKGLRYGMILFIISEVLFFAGFFWAFYHSSLAPTPELGGIWPPAGITPLNPFEVPLLNTAVLLASGVTVTWAHHSIMAGRRKPAIHALFLTISLGFYFTLLQALEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLLVCLLRQINYHFTPTHHFGFEAAA 239 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig503.13047.1 >prot_L-elsbetiae_contig503.13047.1 ID=prot_L-elsbetiae_contig503.13047.1|Name=mRNA_L-elsbetiae_contig503.13047.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=42bp MTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECAS*back to top mRNA from alignment at L-elsbetiae_contig503:18689..19234+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig503.13047.1 ID=mRNA_L-elsbetiae_contig503.13047.1|Name=mRNA_L-elsbetiae_contig503.13047.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=546bp|location=Sequence derived from alignment at L-elsbetiae_contig503:18689..19234+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig503:18689..19234+ >mRNA_L-elsbetiae_contig503.13047.1 ID=mRNA_L-elsbetiae_contig503.13047.1|Name=mRNA_L-elsbetiae_contig503.13047.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=252bp|location=Sequence derived from alignment at L-elsbetiae_contig503:18689..19234+ (Laminarionema elsbetiae ELsaHSoW15)back to top |