mRNA_L-elsbetiae_contig5022.13038.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5022.13038.1 vs. uniprot
Match: D8LQL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL9_ECTSI) HSP 1 Score: 183 bits (464), Expect = 1.840e-49 Identity = 135/264 (51.14%), Postives = 157/264 (59.47%), Query Frame = 2 Query: 752 RLRQRAAVLVQQERESLLRELHAELGLERNLFEARKPAISEEA---YHAARKEQASALEKQEHGLRMVLARREFKDLKDAARERLAVAHAQEKEKTLTRLRRSLGRGTGHSVSGLRGELWEEAHDKRTRALHEGEAAFEHSCRLLRQQSDHRTKANMEVMAEEAAIAEQSALAVLREVEEQATAEELSRVTIDLERDGREAEVELKRQLHREAARSVSLAVDACTFQHKRAQQEVTARAAEALQRALELAGEEEVARTKAVLGR 1534 RL +RA +LVQ+ER LLRELHAEL +ER FEARKPAISEE Y + A E+ L + L+ HDK RALHEGEAAF HSCRL+RQQSDH +A ++ M EAAIA++ ALA LREVE T EELSRVT DLE D REAE ELKRQLHREAARS++LAV+ACT +HKR Q E T RAAEAL++AL+ AGE+EV RTK LGR Sbjct: 9 RLLKRADLLVQEERGRLLRELHAELDVERKKFEARKPAISEEIVADYDSCNAWAILAYPCMEYALIFL--------------------------------------------------LFCGPHDK-GRALHEGEAAFGHSCRLIRQQSDHNIQAKIDAMGGEAAIAQEIALAALREVEASITEEELSRVTSDLEGDRREAETELKRQLHREAARSINLAVEACTSKHKRVQHETTVRAAEALRQALDAAGEDEVTRTKVALGR 221 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5022.13038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5022.13038.1 >prot_L-elsbetiae_contig5022.13038.1 ID=prot_L-elsbetiae_contig5022.13038.1|Name=mRNA_L-elsbetiae_contig5022.13038.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=699bp MRSASGGTLTPQEVVERLNRSLEQELSNLEGALPASRTRTCATTCRSGCGback to top mRNA from alignment at L-elsbetiae_contig5022:1018..7283- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5022.13038.1 ID=mRNA_L-elsbetiae_contig5022.13038.1|Name=mRNA_L-elsbetiae_contig5022.13038.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6266bp|location=Sequence derived from alignment at L-elsbetiae_contig5022:1018..7283- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5022:1018..7283- >mRNA_L-elsbetiae_contig5022.13038.1 ID=mRNA_L-elsbetiae_contig5022.13038.1|Name=mRNA_L-elsbetiae_contig5022.13038.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4194bp|location=Sequence derived from alignment at L-elsbetiae_contig5022:1018..7283- (Laminarionema elsbetiae ELsaHSoW15)back to top |