mRNA_L-elsbetiae_contig5011.13022.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5011.13022.1 vs. uniprot
Match: D8LQ70_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ70_ECTSI) HSP 1 Score: 295 bits (755), Expect = 1.860e-93 Identity = 157/167 (94.01%), Postives = 162/167 (97.01%), Query Frame = 1 Query: 1 FIQKIQPVRADGNLLLCTLLLGNVAVNALLSIVMAQLTSGLVGFALATVVITIFGEIIPQAVCSRHALLIGSKVVPLVKFIIVVFYPVTKPLSIMLDKLLGDEIGTIHSRKELSELLKIHVEHGAIDVETGRQVAGAMNYKEHTVREVMTPVKDCFMLSVSEKLNFK 501 F +KIQPVRADGNLLLCTLLLGNVAVNALLSIVMAQLTSGLVGFALATV+ITIFGEIIPQAVCSRHAL IGSKVVPLVK II + YPVTKPLS+MLDKLLGDEIGTIHSRKELSELLKIHVEHGAIDVETGR+VAGAMNYKEHTVREVMTPVKDCFMLSVSEKLNFK Sbjct: 73 FAKKIQPVRADGNLLLCTLLLGNVAVNALLSIVMAQLTSGLVGFALATVIITIFGEIIPQAVCSRHALRIGSKVVPLVKGIIFLLYPVTKPLSLMLDKLLGDEIGTIHSRKELSELLKIHVEHGAIDVETGREVAGAMNYKEHTVREVMTPVKDCFMLSVSEKLNFK 239
BLAST of mRNA_L-elsbetiae_contig5011.13022.1 vs. uniprot
Match: A0A836CN78_9STRA (Putative magnesium and cobalt efflux protein corC n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN78_9STRA) HSP 1 Score: 214 bits (544), Expect = 3.800e-65 Identity = 108/167 (64.67%), Postives = 139/167 (83.23%), Query Frame = 1 Query: 1 FIQKIQPVRADGNLLLCTLLLGNVAVNALLSIVMAQLTSGLVGFALATVVITIFGEIIPQAVCSRHALLIGSKVVPLVKFIIVVFYPVTKPLSIMLDKLLGDEIGTIHSRKELSELLKIHVEHGAIDVETGRQVAGAMNYKEHTVREVMTPVKDCFMLSVSEKLNFK 501 + +KI PVR +GNLLLCTLLLGNVA N LLSIVMA LT+GLVGF L+T +ITIFGEI+PQAVCSRHAL IG+ VP+VK I+ + +PV KPLS +LD++LG+E+GTIHSR EL ELL++HV++GA+DVETGR++ GA++YK+ VR MTP+ +MLS ++LNFK Sbjct: 37 YAEKIIPVRKNGNLLLCTLLLGNVATNTLLSIVMAGLTNGLVGFLLSTTLITIFGEILPQAVCSRHALRIGAYAVPVVKVIMALLWPVCKPLSFVLDRMLGEEVGTIHSRMELRELLQLHVKYGALDVETGREIEGALHYKDIEVRAAMTPISKVYMLSAEDRLNFK 203
BLAST of mRNA_L-elsbetiae_contig5011.13022.1 vs. uniprot
Match: A0A7S4D856_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D856_HETAK) HSP 1 Score: 214 bits (544), Expect = 1.070e-63 Identity = 112/165 (67.88%), Postives = 137/165 (83.03%), Query Frame = 1 Query: 7 QKIQPVRADGNLLLCTLLLGNVAVNALLSIVMAQLTSGLVGFALATVVITIFGEIIPQAVCSRHALLIGSKVVPLVKFIIVVFYPVTKPLSIMLDKLLGDEIGTIHSRKELSELLKIHVEHGAIDVETGRQVAGAMNYKEHTVREVMTPVKDCFMLSVSEKLNFK 501 +KIQP+R +GNLLLCTLLLGNVAVNALLSI+MA LTSGLVGF L+T+ I IFGEIIPQA CSR+AL IG +V LVK II++ Y +TKPLS++LD LGDEIGTIHSR+EL +LL+IHVEHG++D E+G V GA+ YK+ V EVMT ++DCFML V E L+F+ Sbjct: 67 KKIQPLRENGNLLLCTLLLGNVAVNALLSILMADLTSGLVGFFLSTIFIVIFGEIIPQASCSRYALQIGGRVTGLVKVIIIIMYVITKPLSMVLDWALGDEIGTIHSRRELMKLLQIHVEHGSLDAESGNVVEGALKYKDMVVEEVMTSLEDCFMLPVEEVLDFR 231
BLAST of mRNA_L-elsbetiae_contig5011.13022.1 vs. uniprot
Match: A0A835ZG32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG32_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.440e-59 Identity = 102/149 (68.46%), Postives = 131/149 (87.92%), Query Frame = 1 Query: 7 QKIQPVRADGNLLLCTLLLGNVAVNALLSIVMAQLTSGLVGFALATVVITIFGEIIPQAVCSRHALLIGSKVVPLVKFIIVVFYPVTKPLSIMLDKLLGDEIGTIHSRKELSELLKIHVEHGAIDVETGRQVAGAMNYKEHTVREVMTP 453 +KI P+R DGNLLLCTLLLGNVAVNAL+SIVMA LT+GL+GF L+T +IT+FGEI+PQAVCSRHAL IG+ VVP+++ +++V +P+TKPL+++LDK+LG+E+GTIHSR EL ELL IHV+HGA+DVETGR+V GA+ YK+ V VMTP Sbjct: 112 KKIMPLRKDGNLLLCTLLLGNVAVNALISIVMAGLTNGLLGFFLSTAIITVFGEILPQAVCSRHALQIGAFVVPMMRVVVLVLWPITKPLAVLLDKMLGEEVGTIHSRTELRELLHIHVKHGALDVETGREVEGALKYKDTQVCTVMTP 260
BLAST of mRNA_L-elsbetiae_contig5011.13022.1 vs. uniprot
Match: B7G344_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G344_PHATC) HSP 1 Score: 196 bits (499), Expect = 3.270e-59 Identity = 104/167 (62.28%), Postives = 132/167 (79.04%), Query Frame = 1 Query: 1 FIQKIQPVRADGNLLLCTLLLGNVAVNALLSIVMAQLTSGLVGFALATVVITIFGEIIPQAVCSRHALLIGSKVVPLVKFIIVVFYPVTKPLSIMLDKLLGDEIGTIHSRKELSELLKIHVEHGAIDVETGRQVAGAMNYKEHTVREVMTPVKDCFMLSVSEKLNFK 501 + I PVR +GNLLLCTLLLGNVAVNALLSI+M + GL+GF +T +I IFGEIIPQA CSR+ALLIGSK VPLV+ I+V+FYP+ PL+ MLDKLLG E+ TI+S EL +LL+IHVE+ A+D +T + GA+ YK+ TV+EVMTP+ + FMLSV EKL+F+ Sbjct: 42 YASDIFPVRENGNLLLCTLLLGNVAVNALLSIMMGDIAGGLIGFLSSTFLIVIFGEIIPQAACSRYALLIGSKTVPLVRVILVLFYPIAAPLAYMLDKLLGAELATIYSSAELMKLLQIHVENEAMDQDTAVAMRGALKYKDTTVKEVMTPLSNTFMLSVDEKLSFE 208
BLAST of mRNA_L-elsbetiae_contig5011.13022.1 vs. uniprot
Match: A0A7S4VAQ1_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VAQ1_9STRA) HSP 1 Score: 206 bits (524), Expect = 1.050e-58 Identity = 106/165 (64.24%), Postives = 136/165 (82.42%), Query Frame = 1 Query: 7 QKIQPVRADGNLLLCTLLLGNVAVNALLSIVMAQLTSGLVGFALATVVITIFGEIIPQAVCSRHALLIGSKVVPLVKFIIVVFYPVTKPLSIMLDKLLGDEIGTIHSRKELSELLKIHVEHGAIDVETGRQVAGAMNYKEHTVREVMTPVKDCFMLSVSEKLNFK 501 ++I PVR++GNLLLCTLLLGNVAVNALLSIVMA +TSGLVGF +T VI IFGEI+PQA CSRHAL +G + VPLVK II++F+P+ PL+ +LDKLLG EIGT +S+ E+ +LL+IHV+ G D ETG + GA+NY++ TV EVMTP+++ FML+V EKLNF+ Sbjct: 305 RRIYPVRSNGNLLLCTLLLGNVAVNALLSIVMADITSGLVGFITSTGVIVIFGEILPQAACSRHALRVGYRTVPLVKVIIIIFFPIAGPLAFVLDKLLGHEIGTTYSKAEMRKLLEIHVKQGRFDHETGTAMKGALNYQDMTVSEVMTPLENVFMLNVDEKLNFE 469
BLAST of mRNA_L-elsbetiae_contig5011.13022.1 vs. uniprot
Match: A0A835YX11_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX11_9STRA) HSP 1 Score: 197 bits (501), Expect = 5.910e-58 Identity = 100/165 (60.61%), Postives = 135/165 (81.82%), Query Frame = 1 Query: 7 QKIQPVRADGNLLLCTLLLGNVAVNALLSIVMAQLTSGLVGFALATVVITIFGEIIPQAVCSRHALLIGSKVVPLVKFIIVVFYPVTKPLSIMLDKLLGDEIGTIHSRKELSELLKIHVEHGAIDVETGRQVAGAMNYKEHTVREVMTPVKDCFMLSVSEKLNFK 501 +KI P+R GNLLLCTL++ NVA+N+L+SI+ A L GL+GFA +T++ITIFGEI+PQAVCSRHAL IG+ V P++ ++V+FYP+ KPL+ +LDK LG+E+GTIH+R EL ELL IHV+HGAIDVETGR++AGA+ YK+ VR VMTP + FMLS +L+++ Sbjct: 24 KKIIPLRKRGNLLLCTLVVMNVAINSLISILSAGLAGGLLGFACSTILITIFGEIVPQAVCSRHALQIGAAVGPVMYVMMVLFYPICKPLAFILDKCLGEEVGTIHTRTELRELLNIHVKHGAIDVETGREMAGALKYKDLLVRAVMTPKEKVFMLSADARLDYR 188
BLAST of mRNA_L-elsbetiae_contig5011.13022.1 vs. uniprot
Match: A0A7R9WK34_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WK34_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.300e-56 Identity = 94/164 (57.32%), Postives = 128/164 (78.05%), Query Frame = 1 Query: 7 QKIQPVRADGNLLLCTLLLGNVAVNALLSIVMAQLTSGLVGFALATVVITIFGEIIPQAVCSRHALLIGSKVVPLVKFIIVVFYPVTKPLSIMLDKLLGDEIGTIHSRKELSELLKIHVEHGAIDVETGRQVAGAMNYKEHTVREVMTPVKDCFMLSVSEKLNF 498 +KI P+R +GNLLLCTLLLGNVAVNALLSI+ A + GLVGF +T VI IFGEI+PQA CSR+AL +GSK VP+V+ I+ + YP+ PL+ MLDK+LG E+GT +S+ E+++LL+IHV+ G + ETG + GA+ Y++ V+EVMTP+++ FML EKL+F Sbjct: 37 RKIYPIRKNGNLLLCTLLLGNVAVNALLSILTADIWGGLVGFFASTAVIVIFGEILPQAACSRYALQVGSKTVPIVRVIMCLMYPIAFPLAFMLDKILGHELGTTYSKAEMTKLLEIHVKEGRFNQETGTAMTGALKYQDVLVKEVMTPIENTFMLDAEEKLSF 200
BLAST of mRNA_L-elsbetiae_contig5011.13022.1 vs. uniprot
Match: A0A7R9WLJ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WLJ5_9STRA) HSP 1 Score: 186 bits (472), Expect = 3.180e-55 Identity = 94/164 (57.32%), Postives = 128/164 (78.05%), Query Frame = 1 Query: 7 QKIQPVRADGNLLLCTLLLGNVAVNALLSIVMAQLTSGLVGFALATVVITIFGEIIPQAVCSRHALLIGSKVVPLVKFIIVVFYPVTKPLSIMLDKLLGDEIGTIHSRKELSELLKIHVEHGAIDVETGRQVAGAMNYKEHTVREVMTPVKDCFMLSVSEKLNF 498 +KI P+R +GNLLLCTLLLGNVAVNALLSI+ A + GLVGF +T VI IFGEI+PQA CSR+AL +GSK VP+V+ I+ + YP+ PL+ MLDK+LG E+GT +S+ E+++LL+IHV+ G + ETG + GA+ Y++ V+EVMTP+++ FML EKL+F Sbjct: 149 RKIYPIRKNGNLLLCTLLLGNVAVNALLSILTADIWGGLVGFFASTAVIVIFGEILPQAACSRYALQVGSKTVPIVRVIMCLMYPIAFPLAFMLDKILGHELGTTYSKAEMTKLLEIHVKEGRFNQETGTAMTGALKYQDVLVKEVMTPIENTFMLDAEEKLSF 312
BLAST of mRNA_L-elsbetiae_contig5011.13022.1 vs. uniprot
Match: A0A7S2SUL8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUL8_9STRA) HSP 1 Score: 191 bits (484), Expect = 2.390e-54 Identity = 98/165 (59.39%), Postives = 131/165 (79.39%), Query Frame = 1 Query: 7 QKIQPVRADGNLLLCTLLLGNVAVNALLSIVMAQLTSGLVGFALATVVITIFGEIIPQAVCSRHALLIGSKVVPLVKFIIVVFYPVTKPLSIMLDKLLGDEIGTIHSRKELSELLKIHVEHGAIDVETGRQVAGAMNYKEHTVREVMTPVKDCFMLSVSEKLNFK 501 +KI P+R +GNLLLCTLLLGNVAVNA+LSI++A LTSGL+GF L+T++I +FGEI+PQA CSR+ L IGS+ VP+VK I++ PVT PL+ +LD +LGDE+GTI+S EL +L++IH G +D E GR + GA+ YK+ V+EVMTP++D +MLS KLNFK Sbjct: 107 RKIIPIRKNGNLLLCTLLLGNVAVNAMLSILLADLTSGLLGFILSTILIVLFGEIMPQASCSRYPLQIGSRTVPIVKMIMLFLLPVTYPLAYLLDYVLGDELGTIYSNTELIKLMRIHEREGQLDGEQGRALEGALRYKDMLVKEVMTPIQDVYMLSHETKLNFK 271 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5011.13022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5011.13022.1 >prot_L-elsbetiae_contig5011.13022.1 ID=prot_L-elsbetiae_contig5011.13022.1|Name=mRNA_L-elsbetiae_contig5011.13022.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=168bp FIQKIQPVRADGNLLLCTLLLGNVAVNALLSIVMAQLTSGLVGFALATVVback to top mRNA from alignment at L-elsbetiae_contig5011:3010..5495+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5011.13022.1 ID=mRNA_L-elsbetiae_contig5011.13022.1|Name=mRNA_L-elsbetiae_contig5011.13022.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2486bp|location=Sequence derived from alignment at L-elsbetiae_contig5011:3010..5495+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5011:3010..5495+ >mRNA_L-elsbetiae_contig5011.13022.1 ID=mRNA_L-elsbetiae_contig5011.13022.1|Name=mRNA_L-elsbetiae_contig5011.13022.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1008bp|location=Sequence derived from alignment at L-elsbetiae_contig5011:3010..5495+ (Laminarionema elsbetiae ELsaHSoW15)back to top |