mRNA_L-elsbetiae_contig5006.13013.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5006.13013.1
Unique NamemRNA_L-elsbetiae_contig5006.13013.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5006.13013.1 vs. uniprot
Match: A0A6H5JRU9_9PHAE (GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRU9_9PHAE)

HSP 1 Score: 686 bits (1771), Expect = 1.900e-243
Identity = 379/529 (71.64%), Postives = 429/529 (81.10%), Query Frame = 1
Query:    1 VSRRRGLHLLCWTPCVLLACFWASRWTAEF--SSATSAGG---RPGVLGLRVAEDHAPDDGGEDPELAYWYPIPDRIVPIRRSGEVDEYMTGADMLRL-LEAARLRNTXXXXXXXXXXXXXXXXHDARKIAPIANVHAAEALGDS--DVRSVTTVFAPGWSGMPTAGNRCSSVNMSAIAPSMACGAPLAAPCFDHGRCRPRAAGGPG--PSIYVFDAACSLANSSALPPSTESLMLSHTWREMARAAGVLSETYRDACLFLHVNKRLGVVPCPVEGPLWDGGRNHVMVDFTDGTRDLKRHLAESFAMDASSNMRSCYYRSGYDFAVPLRHKVDSANLTYVAPWHREYFLTAKGSLYLSGNGHDERMSVVQLHSEPDGVVVALSCFDLHDEHLLPENEDFCMALNETASRHEYEELMNTTFGLVPAGRSTATYRLAEVMSAGAIPVFVARDIVRPFPERVDWSSLSFSFPPEEVGPAMMDTLRAVPPTELLAMQQKSVEAFLDIFGEEPGYDRIARVVIDELVKRVGHHR 1557
            +SRRR LHLL   PCVLL C W+  + AEF  ++A   GG   +  VL LR   D+  DD G + +    YPIPDR+ P+ R  EV +Y+TGAD++ L LEA R  +TXXXXXXXXXXXXXXXX           V AAEALGD+  DVR V T FAPGW GMPT G+RCSS++M+A+APSMACGAPLA PCFDH RCRP A+GG    PSIYVFDA CSLA+SSALPPS ESLMLSHTWRE AR AGVLSETYRDACLFLHVNKRL  VPCP E PLW+GG+NHVMVD TD TRD K  +A S AMDASSNMRSC+YRSGYDFAVPLRH+    NLT +APWHR+YFLT KG+LYLSG G+DERMSVV LHSEP+GV++ L+CF+LHDEHLLPENE+FC+ALNETASRHEYE+LMNTTFGLVPAGR  ATYRLAEVMSAGAIPVFV+RD+VRPFPERVDW +LSFSFPPEEVGPAMMDTLR+V P ELL MQ+KSV+AF +IFGEEPGYDRIARVV+DELV RVG+HR
Sbjct:   21 LSRRRALHLLWAAPCVLLGCAWSLGF-AEFDRNAAQPRGGSKSKGSVLLLRWGGDN--DDPGLNDDR---YPIPDRMEPVPRPPEVWDYLTGADIMNLRLEALRRNSTXXXXXXXXXXXXXXXXXXXX-------VEAAEALGDNKEDVRPVDTAFAPGWKGMPTRGSRCSSIDMAAVAPSMACGAPLAEPCFDHSRCRPHASGGAPSKPSIYVFDATCSLADSSALPPSNESLMLSHTWREAARDAGVLSETYRDACLFLHVNKRLNHVPCPAEKPLWNGGKNHVMVDLTDRTRDKKPLIAGSAAMDASSNMRSCFYRSGYDFAVPLRHQWGFGNLTELAPWHRDYFLTVKGNLYLSGVGYDERMSVVPLHSEPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVTPAELLGMQRKSVQAFYEIFGEEPGYDRIARVVVDELVLRVGYHR 536          
BLAST of mRNA_L-elsbetiae_contig5006.13013.1 vs. uniprot
Match: A0A6H5JGQ8_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ8_9PHAE)

HSP 1 Score: 340 bits (873), Expect = 4.160e-109
Identity = 182/369 (49.32%), Postives = 241/369 (65.31%), Query Frame = 1
Query:  478 NRCSSVNMSAIAPSMACGAPLAAPCFDHGRCRPRAAGGPGPSIYVFDAACSLANSSALPPSTESLMLSHTW----------REMARAAGVLSETYRDACLFLHVNKRLGVVPCPVEGPLWDGGRNHVMVDFTDGTRDLKRHLAESFAMDASSNMRSCYYRSGYDFAVPLRHKVDSANLTYVAPWHREYFLTAKGSLYLSGNGHDERMSVVQLHSEPDGVVVALSCFDLHDEHLLPENEDFCMALNETASRHEYEELMNTTFGLVPAGRSTATYRLAEVMSAGAIPVFVARDIVRPFPERVDWSSLSFSFPPEEVGPAMMDTLRAVPPTELLAMQQKSVEAFLDIFGEEPG-YDRIARVVIDELVKRVGH 1551
            NRCS ++ SA +  M CG PL+ PCF   +C      G    IYVFD+ CSL  +S L    E   +S  W          R  A   G+L+ETY  AC+ +HV+      PC V+ P W+GG NH++VD +D  RD +  +A S+AM+A++NM +C+YRSGYD +VPL  K    +L  V PW R +FLT KGSLYLSG+G  ERMS+V L  E +GV+++L CF++H+EHLLPEN ++C AL++    H Y  LMNTTFGLVPAGRS  TYRL EVMSAG+IPVFV  D+V PF E +DWSS SF+F P++V   M+ TLRAVP  EL  MQ+KS+EA+  IFG   G + + AR+V++ L +R+ H
Sbjct:   64 NRCSDLDQSAFSIGMQCGPPLSPPCF---QCNSTECLG-NAGIYVFDSECSLLETSELRVPDEEQKVSWAWMDHHYVEWVLRNEAEQMGMLAETYESACILVHVSPG-STKPCAVDQPRWNGGANHLLVDMSDKGRDSRPDVAGSYAMEAATNMHTCFYRSGYDISVPLAPKHVFNDLADVDPWDRNFFLTTKGSLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEVHEEHLLPENVEYCRALSDQYDDHSYTSLMNTTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVPPFEELIDWSSFSFAFAPDQVESQMVRTLRAVPRAELEQMQRKSLEAYRRIFGVNMGDFVQGARIVLETLQRRLEH 427          
BLAST of mRNA_L-elsbetiae_contig5006.13013.1 vs. uniprot
Match: D7G4H1_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H1_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 6.060e-103
Identity = 167/327 (51.07%), Postives = 221/327 (67.58%), Query Frame = 1
Query:  604 IYVFDAACSLANSSALPPSTESLMLSHT--------W--REMARAAGVLSETYRDACLFLHVNKRLGVVPCPVEGPLWDGGRNHVMVDFTDGTRDLKRHLAESFAMDASSNMRSCYYRSGYDFAVPLRHKVDSANLTYVAPWHREYFLTAKGSLYLSGNGHDERMSVVQLHSEPDGVVVALSCFDLHDEHLLPENEDFCMALNETASRHEYEELMNTTFGLVPAGRSTATYRLAEVMSAGAIPVFVARDIVRPFPERVDWSSLSFSFPPEEVGPAMMDTLRAVPPTELLAMQQKSVEAFLDIFGEEPG-YDRIARVVIDELVKRVGH 1551
            IYVFD+ CSL  +S L    E   +S T        W  R  A   G+L+ETY  AC+ +HV+      PC V+ P W GG NH++VD +D  R  +  +A S+AM+A+SNM++C+YRSG+D +VPL  K    NL  VA W R +FLT KGSLYLS +G  ERMS+V L  E +GV+++L CF+LH+EHLLPEN ++C AL++    H YE LMN+TFGLVPAGRS  T+RL EVMSAG+IPVFV  D+V PF E +DWSS SF+F P++VGP M+ TLRAVP  EL  MQ+KS++A   IFG + G +   AR+++  L +R+GH
Sbjct:    6 IYVFDSECSLLETSKLRAQDEGKKVSSTRMHHHYVEWVLRNEAEQMGMLAETYESACILVHVSPG-STKPCAVDQPRWSGGANHLLVDMSDNGRGSRPIVAGSYAMEAASNMQTCFYRSGFDISVPLHSKKAFNNLADVAAWDRNFFLTTKGSLYLSRHGSGERMSLVPLQDEANGVIMSLHCFELHNEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTFRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHRKIFGVDKGIFVPSARIMLKILQRRLGH 331          
BLAST of mRNA_L-elsbetiae_contig5006.13013.1 vs. uniprot
Match: A0A6H5KKV6_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV6_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 1.190e-101
Identity = 176/376 (46.81%), Postives = 237/376 (63.03%), Query Frame = 1
Query:  454 WSGMPTAGNRCSSVNMSAIAPSMACGAPLAAPCFDHGRCRPRAAGGPGPSIYVFDAACSLANSSALPPSTESLMLSHT----------WREMARAAGVLSETYRDACLFLHVNKRLGVVPCPVEGPLWDGGRNHVMVDFTDGTRDLKRHLAESFAMDASSNMRSCYYRSGYDFAVPLRHKVDSANLTYVAPWHREYFLTAKGSLYLSGNGHDERMSVVQLHSEPDGVVVALSCFDLHDEHLLPENEDFCMALNETASRHEYEELMNTTFGLVPAGRSTATYRLAEVMSAGAIPVFVARDIVRPFPERVDWSSLSFSFPPEEVGPAMMDTLRAVPPTELLAMQQKSVEAFLDIFGEEPGYDR-IARVVIDELVKRVG 1548
            W G P A NRCS ++ S  +  M CG PL+ PCF        + GG    IYVFD  CSL +SS L  + +    S T           R      G+L++TY  AC+F+HV K L   PC V  P W+ G NH++VD +D  R  +  +A SFAM+A++NM +C+YRSGYD +VPL  +    +L  VAP  RE+FLT K +LY+SG+G +ER+S++ L  E  GVVV + CF+ H EHLLPEN +FC AL +    ++Y  LMN+TFGLVPAGR  ATYRL EVMSAG IPVFV RD+V PF E++DW S+SF+F P+EV   MM TL AVP  +L  MQ+KS+EA+  +FG +    R  A++++  + +R+G
Sbjct:   54 WVGRPQA-NRCSDLDQSVFSTGMQCGPPLSPPCFQSYSTECLSNGG----IYVFDGECSLQDSSELLAADQGYEFSRTRVGDQDAAVTLRNETAQLGMLADTYASACMFVHVGKGLKR-PCAVNQPRWNNGANHLLVDMSDKGRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEEHGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGTIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMKTLLAVPRAQLEEMQRKSLEAYGKMFGADVNDFRPSAKIILGIIRRRLG 423          
BLAST of mRNA_L-elsbetiae_contig5006.13013.1 vs. uniprot
Match: A0A6H5L9T2_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9T2_9PHAE)

HSP 1 Score: 323 bits (828), Expect = 4.110e-101
Identity = 177/369 (47.97%), Postives = 236/369 (63.96%), Query Frame = 1
Query:  481 RCSSVN--MSAIAPSMACGAPLAAPCFDHGRCRPRAAGGPGPSIYVFDAACSLANSSALPPSTES-LMLSHT---WREMARAAGVLSETYRDACLFLHVNKRLGVVPCPVEGPLWDGGRNHVMVDFTD----GTRDLKRHLAESFAMDASSNMRSCYYRSGYDFAVPL-RHKVDSANLTYVAPWHREYFLTAKGSLYLSGNGHDERMSVVQLHSEPDGVVVALSCFDLHDEHLLPENEDFCMALNETASRHEYEELMNTTFGLVPAGRSTATYRLAEVMSAGAIPVFVARDIVRPFPERVDWSSLSFSFPPEEVGPAMMDTLRAVPPTELLAMQQKSVEAFLDIFGEEPGYDRIARVVIDELVKRVGHH 1554
            RCS++    +A A    CG PL  PCFDH RC   ++    P IYV+D  CSLA+S+ L  +  + L   H    WRE    AG+L+ TY +ACLF+HVN      PC    PLW+GG NH+M++FT     G R  + H++ ++AMD S +  SCYYRSGYD ++PL   KV        AP  R+YFLT KG+LYL G G +ER +V ++H   +GVV  + C ++H +  LPEN+D+C    +    ++YE+LMNTTF LVPAGRS  ++RL EVMSAGAIPVFV RD ++PF E++DW S SF F P++VGP MM+TLRAV P +LL MQ+KS+ A+  IFG    Y  IA   ID LV+R+G+H
Sbjct:  164 RCSNLENATAAFAQGSVCGPPLTKPCFDHSRCGSVSS---RPMIYVYDQECSLADSNKLRINDHTNLDKQHQGSYWREAVWRAGLLANTYEEACLFIHVNTHNHDEPCATRAPLWNGGVNHIMMEFTPWWIKGQR-ARPHISNTYAMDWSFDALSCYYRSGYDLSLPLVPGKVFPDTAPSPAP-DRDYFLTFKGTLYLRGYGLEERSAVSRVHDPANGVVSVIKCSNMHGDESLPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVQPAQLLEMQRKSLRAYWKIFGGVTNYSVIASNAIDMLVQRIGYH 527          
BLAST of mRNA_L-elsbetiae_contig5006.13013.1 vs. uniprot
Match: D7G4H3_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H3_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 2.820e-78
Identity = 125/222 (56.31%), Postives = 165/222 (74.32%), Query Frame = 1
Query:  889 MDASSNMRSCYYRSGYDFAVPLRHKVDSANLTYVAPWHREYFLTAKGSLYLSGNGHDERMSVVQLHSEPDGVVVALSCFDLHDEHLLPENEDFCMALNETASRHEYEELMNTTFGLVPAGRSTATYRLAEVMSAGAIPVFVARDIVRPFPERVDWSSLSFSFPPEEVGPAMMDTLRAVPPTELLAMQQKSVEAFLDIFG-EEPGYDRIARVVIDELVKRVGH 1551
            M+A+SNM +C+YRSG+D +VPL       NL  VA W R +FLT KG+LYLSG+G  ERMS+V L  E +GV+++L CF++HDEHLLPEN ++C AL++    H YE LMN+TFGLVPAGRS  TYRL EVMSAG+IPVFV  D+V PF E +DWSS SF+F P++VGP M+ TLRAVP  EL  MQ+KS++A   IFG ++  +   AR++++ L +R+GH
Sbjct:    1 MEAASNMHTCFYRSGFDISVPLPSNKAFNNLADVAAWDRNFFLTTKGTLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEIHDEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHGKIFGVDQDIFVPSARIMLEILQRRLGH 222          
BLAST of mRNA_L-elsbetiae_contig5006.13013.1 vs. uniprot
Match: D7G4H7_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H7_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 3.900e-77
Identity = 126/240 (52.50%), Postives = 172/240 (71.67%), Query Frame = 1
Query:  841 TDGTRDLKRHLAESFAMDASSNMRSCYYRSGYDFAVPLRHKVDSANLTYVAPWHREYFLTAKGSLYLSGNGHDERMSVVQLHSEPDGVVVALSCFDLHDEHLLPENEDFCMALNETASRHEYEELMNTTFGLVPAGRSTATYRLAEVMSAGAIPVFVARDIVRPFPERVDWSSLSFSFPPEEVGPAMMDTLRAVPPTELLAMQQKSVEAFLDIFGEEPGYDR-IARVVIDELVKRVGHHR 1557
            +D  R  +  +A SFAM+A++NM +C+YRSGYD +VPL  +    +L  V+P  RE+FLT K +LY+SG+G +ER+S++ L  E +GVVV + CF+ H EHLLPEN +FC AL +    ++Y  LMN+TFGLVPAGR  ATYRL EVMSAG+IPVFV RD+V PF E++DW S+SF+F P+EV   MM TL AVPP +L  MQ+KS+EA+  +FG +    R  AR+++  L +R+GH R
Sbjct:    2 SDKGRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVSPLDREFFLTTKCTLYISGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPPAQLEEMQRKSLEAYGRMFGADVNDFRPSARIILGILRRRLGHRR 241          
BLAST of mRNA_L-elsbetiae_contig5006.13013.1 vs. uniprot
Match: D8LNT2_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT2_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 1.690e-72
Identity = 168/399 (42.11%), Postives = 213/399 (53.38%), Query Frame = 1
Query:  484 CSSVNMSAIAPSMACGAPLAAPCFDHGRCRPRAAGGPGPSIYVFDAACSLANSS---------ALPPSTESLMLSHTW-------REMARAAGVLSETYRDACL-FLHVNKRLGVVPCPVEGPLWDGGRNHVMVDFTDGTRDLKRHLAESFAMDASSNMRSCYYRSGYDFAVPLRHKVDSANLTYVAPWHREYFLTAKGSLYLSGNGHDERMSVVQL---------------------------HSEPDGVVVALSCFDLHDEHLLPENEDFCMALN-ETASRHEYEELMNTTFGLVPAGRSTATYRLAEVMSAGAIPVFVARDIVRPFPERVDWSSLSFSFPPEEVGPAMMDTLRAVPPTELLAMQQKSVEAFLDIFGEEPGYDRIARVVIDELVKRV 1545
            C  VN  A    +ACG+P +APCFD  RCR  + GG   S+YV D  CS+  SS         A+PP  ++   +  W       R  A   G+L +T  +AC+ F  V +  G   C  + P W  G+NH ++D  D +R  +  L +  AM   SNMR CYYR GYD A+PL  +     L  VAP  R+YF T KG LYLSGNG  ER +V+ L                            S PD V+V   C + H E LL  N+  C A   E  S   Y +LMNTTF L+PAGRS ATYRLAE +SAGA+PVF+ +D V+PFP ++ WS  SFSFPPEEV P M+ TLRAVP  EL  MQ  ++E F   FG  PG D +   V+D L  R+
Sbjct:  197 CLMVNTRA---EVACGSPWSAPCFDLSRCR--SGGGDLLSVYVHDETCSMRTSSEIMASYGDVAIPPPWDAAAETQLWXXXXXTLRHAAAERGLLVDTPDEACIVFYAVPRDKG--ECVSKTPTWGEGQNHALLDLNDESRAARSSL-DGKAMFLQSNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAPAEGRGEMGRANGDSQSSSSPD-VLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQDFVKPFPGKIPWSDFSFSFPPEEV-PRMLKTLRAVPDRELAQMQATALEVFDTYFG--PGMDNMLHTVLDILEDRL 583          
BLAST of mRNA_L-elsbetiae_contig5006.13013.1 vs. uniprot
Match: D8LQY4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY4_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 1.790e-56
Identity = 101/188 (53.72%), Postives = 130/188 (69.15%), Query Frame = 1
Query:  889 MDASSNMRSCYYRSGYDFAVPL-RHKVDSANLTYVAPWHREYFLTAKGSLYLSGNGHDERMSVVQLHSEPDGVVVALSCFDLHDEHLLPENEDFCMALNETASRHEYEELMNTTFGLVPAGRSTATYRLAEVMSAGAIPVFVARDIVRPFPERVDWSSLSFSFPPEEVGPAMMDTLRAVPPTELLAMQ 1449
            MD S +  SCYYRSGYD ++PL   KV        AP  R+YFLT KG+LYL G G +ER +V + H   +GVV  + C ++H + +LPEN+D+C    +    ++YE+LMNTTF LVPAGRS  ++RL EVMSAGAIPVFV RD ++PF E++DW S SF F P++VGP MM+TLRAV P  LL MQ
Sbjct:    1 MDWSFDALSCYYRSGYDLSLPLVPGKVFPDTAPSPAP-DRDYFLTFKGTLYLRGYGLEERSAVSRAHDPANGVVSVIKCSNMHGDDILPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVEPARLLEMQ 187          
BLAST of mRNA_L-elsbetiae_contig5006.13013.1 vs. uniprot
Match: A0A6H5JXY3_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY3_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 7.690e-56
Identity = 147/389 (37.79%), Postives = 187/389 (48.07%), Query Frame = 1
Query:  484 CSSVNMSAIAPSMACGAPLAAPCFDHGRCRPRAAGGPGPSIYVFDAACSLANSSALPPSTESLMLSHTW----------------REMARAAGVLSETYRDACLFLHVNKRLGVVPCPVEGPLWDGGRNHVMVDFTDGTRDLKRHLAESFAMDASSNMRSCYYRSGYDFAVPLRHKVDSANLTYVAPWHREYFLTAKGSLYLSGNGHDERMSVVQL---------------------------HSEPDGVVVALSCFDLHDEHLLPENEDFCMALN-ETASRHEYEELMNTTFGLVPAGRSTATYRLAEVMSAGAIPVFV-----------------------ARDIVRPFPERVDWSSLSFSFPPEEVGPAMMDTLRAVPPTELLAMQ 1449
            C  VN  A    +ACG+P +APCFD  RCR    GG   S+YV D  CS+  +S +  S   + +S  W                R  A   G+L +T  +AC+  +   R     C  + P W GG+NH ++D  D +R  +R L +  AM   SNMR CYYR GYD A+PL             P  R      +G LYLSGNG  ER +V+ L                            S PD V+V   C + H E LL  N+  C A   E  S   + ELMNTTF L+PAGRS ATYRLAE +SAGA+PVF+                       ++D V+PFP ++ WS  SF+FPPEEV P M+ TLRAVP  EL  MQ
Sbjct:  116 CLMVNTRA---EVACGSPWSAPCFDLSRCR--GGGGGSLSVYVHDETCSMRKTSEIMASYGDVAVSPPWDAAAETQLXXXXXXXLRLAAAERGLLVDTPDEACIVFYAVPR-DKAECVSKTPTWGGGQNHALLDLNDESRAARRSL-DGKAMFLQSNMRPCYYRHGYDIAMPL-------------PARRPVERLREGKLYLSGNGFLERSAVLDLMSGGASAAVARAEGRGEMEGANGDSHSSSSPD-VLVVERCCNFHSEQLLSWNKAMCEASQREYYSSPSFGELMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQDGYVAEASNKPPTPTASKHCNSQDFVKPFPGKIRWSEFSFTFPPEEV-PRMLKTLRAVPDKELARMQ 482          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5006.13013.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRU9_9PHAE1.900e-24371.64GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A6H5JGQ8_9PHAE4.160e-10949.32GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G4H1_ECTSI6.060e-10351.07Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5KKV6_9PHAE1.190e-10146.81GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5L9T2_9PHAE4.110e-10147.97GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G4H3_ECTSI2.820e-7856.31Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H7_ECTSI3.900e-7752.50Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D8LNT2_ECTSI1.690e-7242.11Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D8LQY4_ECTSI1.790e-5653.72Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5JXY3_9PHAE7.690e-5637.79GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5006contigL-elsbetiae_contig5006:730..8535 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score672.5
Seed ortholog evalue1.5e-190
Seed eggNOG ortholog2880.D7FYQ6
Preferred nameEXTL1
KEGG koko:K02366,ko:K02368,ko:K21988
KEGG TC1.A.17.4
KEGG ReactionR05935,R05936,R10138,R10139
KEGG Pathwayko00534,ko01100,map00534,map01100
KEGG ModuleM00059
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000139,GO:0000271,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006040,GO:0006044,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0008150,GO:0008152,GO:0008194,GO:0008354,GO:0008375,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0015012,GO:0015014,GO:0015020,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019899,GO:0019953,GO:0021537,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030111,GO:0030154,GO:0030166,GO:0030176,GO:0030177,GO:0030182,GO:0030201,GO:0030202,GO:0030203,GO:0030210,GO:0030900,GO:0030968,GO:0031090,GO:0031175,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033554,GO:0033692,GO:0034620,GO:0034637,GO:0034645,GO:0034976,GO:0035295,GO:0035966,GO:0035967,GO:0036465,GO:0036498,GO:0040011,GO:0042175,GO:0042221,GO:0042328,GO:0042330,GO:0042802,GO:0042803,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045880,GO:0046982,GO:0046983,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048706,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050508,GO:0050509,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0055123,GO:0060322,GO:0060465,GO:0060828,GO:0061564,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0072498,GO:0090092,GO:0090097,GO:0090098,GO:0090100,GO:0090263,GO:0097485,GO:0098588,GO:0098657,GO:0098791,GO:0098827,GO:0099003,GO:0099504,GO:0120036,GO:0120039,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
EggNOG free text desc.macromolecule glycosylation
EggNOG OGsKOG1021@1,KOG1021@2759
EC2.4.1.224,2.4.1.225
COG Functional cat.S
CAZyGT47,GT64
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko02000
Ec32 ortholog descriptionGlycosyltransferase, family GT47
Ec32 orthologEc-26_004330.1
Exons5
Model size1560
Cds size1560
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5006.13013.1prot_L-elsbetiae_contig5006.13013.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5006 730..8535 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816504.4226608-CDS-L-elsbetiae_contig5006:729..8401622816504.4226608-CDS-L-elsbetiae_contig5006:729..840Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5006 730..840 -
1691683607.6838183-CDS-L-elsbetiae_contig5006:729..8401691683607.6838183-CDS-L-elsbetiae_contig5006:729..840Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5006 730..840 -
1622816504.4338863-CDS-L-elsbetiae_contig5006:2167..23991622816504.4338863-CDS-L-elsbetiae_contig5006:2167..2399Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5006 2168..2399 -
1691683607.6987236-CDS-L-elsbetiae_contig5006:2167..23991691683607.6987236-CDS-L-elsbetiae_contig5006:2167..2399Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5006 2168..2399 -
1622816504.4451363-CDS-L-elsbetiae_contig5006:3134..33251622816504.4451363-CDS-L-elsbetiae_contig5006:3134..3325Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5006 3135..3325 -
1691683607.7134256-CDS-L-elsbetiae_contig5006:3134..33251691683607.7134256-CDS-L-elsbetiae_contig5006:3134..3325Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5006 3135..3325 -
1622816504.4589193-CDS-L-elsbetiae_contig5006:4735..49071622816504.4589193-CDS-L-elsbetiae_contig5006:4735..4907Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5006 4736..4907 -
1691683607.7239227-CDS-L-elsbetiae_contig5006:4735..49071691683607.7239227-CDS-L-elsbetiae_contig5006:4735..4907Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5006 4736..4907 -
1622816504.4699788-CDS-L-elsbetiae_contig5006:7681..85351622816504.4699788-CDS-L-elsbetiae_contig5006:7681..8535Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5006 7682..8535 -
1691683607.7339978-CDS-L-elsbetiae_contig5006:7681..85351691683607.7339978-CDS-L-elsbetiae_contig5006:7681..8535Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5006 7682..8535 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5006.13013.1

>prot_L-elsbetiae_contig5006.13013.1 ID=prot_L-elsbetiae_contig5006.13013.1|Name=mRNA_L-elsbetiae_contig5006.13013.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=520bp
VSRRRGLHLLCWTPCVLLACFWASRWTAEFSSATSAGGRPGVLGLRVAED
HAPDDGGEDPELAYWYPIPDRIVPIRRSGEVDEYMTGADMLRLLEAARLR
NTTAAAAAADAAAGHQQHHDARKIAPIANVHAAEALGDSDVRSVTTVFAP
GWSGMPTAGNRCSSVNMSAIAPSMACGAPLAAPCFDHGRCRPRAAGGPGP
SIYVFDAACSLANSSALPPSTESLMLSHTWREMARAAGVLSETYRDACLF
LHVNKRLGVVPCPVEGPLWDGGRNHVMVDFTDGTRDLKRHLAESFAMDAS
SNMRSCYYRSGYDFAVPLRHKVDSANLTYVAPWHREYFLTAKGSLYLSGN
GHDERMSVVQLHSEPDGVVVALSCFDLHDEHLLPENEDFCMALNETASRH
EYEELMNTTFGLVPAGRSTATYRLAEVMSAGAIPVFVARDIVRPFPERVD
WSSLSFSFPPEEVGPAMMDTLRAVPPTELLAMQQKSVEAFLDIFGEEPGY
DRIARVVIDELVKRVGHHR*
back to top

mRNA from alignment at L-elsbetiae_contig5006:730..8535-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5006.13013.1 ID=mRNA_L-elsbetiae_contig5006.13013.1|Name=mRNA_L-elsbetiae_contig5006.13013.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7806bp|location=Sequence derived from alignment at L-elsbetiae_contig5006:730..8535- (Laminarionema elsbetiae ELsaHSoW15)
GTGAGCAGGCGTCGCGGGCTCCACCTCCTGTGTTGGACGCCGTGCGTCCT GTTGGCGTGCTTCTGGGCGTCGAGGTGGACGGCAGAGTTCAGTTCTGCGA CCTCGGCGGGGGGGCGTCCCGGTGTGCTCGGGCTTCGAGTCGCGGAGGAT CATGCTCCCGATGACGGAGGCGAGGATCCAGAGCTGGCCTATTGGTACCC CATCCCAGACCGCATCGTGCCGATACGACGCTCAGGAGAGGTCGACGAGT ATATGACCGGCGCTGACATGTTGCGCCTGCTGGAGGCGGCCCGTCTCCGG AACACCACCGCCGCCGCCGCCGCCGCCGACGCAGCAGCAGGGCATCAGCA GCACCACGACGCGAGAAAGATCGCGCCGATAGCGAACGTGCACGCGGCGG AGGCGCTCGGCGACAGCGACGTCCGCTCTGTCACCACCGTCTTCGCCCCC GGGTGGAGCGGCATGCCGACCGCCGGCAACCGCTGCTCCTCCGTCAACAT GTCCGCCATCGCTCCGAGCATGGCGTGCGGCGCGCCGCTCGCGGCGCCCT GCTTCGACCACGGCCGCTGCCGCCCGCGCGCCGCCGGCGGGCCGGGCCCG TCCATCTACGTCTTCGATGCCGCCTGCTCCCTCGCCAACAGCTCCGCGCT CCCGCCCAGCACGGAGAGCCTGATGCTGAGCCACACGTGGAGGGAGATGG CCAGGGCTGCCGGGGTGTTATCGGAGACCTACCGGGACGCTTGCCTGTTC CTGCACGTGAACAAGCGGCTGGGGGTCGTCCCGTGCCCCGTGGAGGGTCC GCTGTGGGACGGGGGGAGGAATCACGTGATGGTGGATTTCACCGACGGTA CCCGGTGAGCGATCGATGTACATACCGGTAGTAGCCCGTCTACTTGTGCT CTTCTGTCGGGGGGTGTTTGTTCTGAATTCGCAAAACGTTCGTTTCTATG TAAGTAGACTATCTAGCAGTAGAAAACCTTCTAAATGAAGAGTTGGTAGC GACAGCAGGGGAAGGAGGAGGAGCAGAGTGCTGGGGATGGCCAAATCGCC GGACAAGACTCCTACTAGATAAAAAAAAGTGCCCCATCATCTAACTTCTC CAAGGTTGTCATCTCCTACAACACGTACAAACAGACAATATGTAACCGAG AAGTGATCGTGGCTGTTGTCTGTTTCACAGAACTGTGTGTTCAGGCTGGT GGTACGCTTCCTTCCTCCAACGGATATATATCTCAGGGTGCTGCTGTACA TCCACTACTACAAGTAACGGGGTGGTGCCTGCATGGGGCGCGGGCGGAGA GAGGCGCACTCAATCCCACGTCGACCCCTGTGTCCTCCTTGTTTCATTAG AGCAAAGAGCAAAAGTTGTTGGAGGGAGAGAAGGGCAATCCACTCACATA CGTAATTGTTCTTGTTCGTCTGGGTTTTTTTTCATGTTCTTTCCGTCTGG CTCTTTTGCTCTCGATCAATGAATTCAACAACCGACCAGTTTAACTACAA GTAGCTAATGCAGACCTTGCTTGACTCGGTAGGCTCCTTCTTTTTCTCTA CACTGAACCCAGTATGATGATAAGGGTTTTTGTTCCGCCGCAATATTGCA AAAAAGCCTACAATACCGAGTCGAGGCCTTGTTTATATACGAAGTATCTA GGCCGCGTATTTGATTTGTCTTGTGTCCTTTGTCCTTTGTATAAGAAGCA CAAGGCTGCGCGTTGGCAATTACTGCTGTTTCGCCTTTGCAACGAGTGCA CACATACACAGCTAAATAAGTAAAACTCGCTTCGCTCGAAGAAAGAAGTA GTGTGTCCACAGCTTTGGTGGCTGGAATATATATGTGTATGTAACACAAC CCTGCAGCGTTATTCAAATCACAATGTAGGGAGGGCACTCGGTTCGCTCT TTTTCTTCGATTTCTCGCCGCAGAGGGTGCCTGCCGGGTTGGTGGTGAGG AAAGAACACGCCTGCAGCTCCTGTATTGCTCGAGGGTGTAGAAGAAAGAA TGAAGCGATATCAGTGCTCCAGTCGCGGAGTAATTTATGTATGTACGTAC GGGATGATTTGGGCAAACCGAAGCTTTTTGGGGGGGGGGGACTCGCACAC AAAAAATACGACCATGCGACCCTCCCCCCCCCAAAAAAAAAAAGCAATGC CCTCGCTCTCTTGCGGCCGCGCTGGCACCCGGAGCCGCATACTCCATCCC GGACGGAGAAAAAAAATGGATTTCGATCTACTGACTACAGTACTGGGCCC GCTATAGTGCCGAGGTGTGTCCTGAGATTTGACCGGCACTATACCGGGCA CCGGCACTATTCAGAATAGTGCCTCAATAGTGCCGGTTTTCGAATATCCC CCAATAGTGCCGGACCGGCACTATTGAGGAGGAGTTTGATTTCATGGTGT GGCGCTCATGCTTTGCGGGGCCAACAGAGTACGAAATGGATCGAAATTAT GTATTAATAGCGTATTAATAGTGGACGAAGCTAAATCTCAGTCCTCGTTG CCCTCCTTCGATGTTGCAAGATAAAAAAAGACAAAACAGAACAAGAAACA CGACAGGAAGCGCGCCGCAAAGAAACAAACAACCATGTACTGTACTACTG TACCCCGCCCTCACTACGTCGCGACAAACTCTCTCATGTCTGCCTGGCGC ACCCGCTTCGATGTTGCAAGAAAAAAACAAAAACACACAAACCAAGACAA GCACGACAGGACGCGTACTGCAAGAAAAGCAAAGCGCCTCTGCGTAGAGT TCTTCGGGTCTGCAGCAGCACGTGTACCCTCTGCGTGGCGTCTGTCCGCT GTCTTGTGTGTGTGTGTGGGGGGGGGTGTAGTGAACCGGCACTATACCGG GCACCGGCACTATAGCGGGCCCAGTACTGTACTGACTACTGTGCTGCTCA CAGCTAGTGTCGGTGCAGATTTTATATCCCTGATCGCCCTGTAGGTGTCG AATCAGAGCTGCCTCCCGACGCACTTTCGGGCGCTCGGCCAGCAGCAGCA GGCGGCAGTAGCAAGGGTTACTGCTATAAAGCAAGGACTGAGATGATCTG TGTACCGAGGCCCTATGCGGCGGGGGGGATACCGTCGATAGAACACCGGG ATATTACCCGGGATAAACCATATTCACCTACCCGCCCACCCCACTACCGG TAATATCCGGTAACGGGTAATGTACATACCCAGCATTTTGATTTGTCAGT TTAAACAATGCGATGTGTTCCTATCTTTGGAGTAGGCGGTAACATCACAA CATCACGGTGGGTTTCCTCCCCGAAATACTTGTTGGTTTGACCTGGCAAA AGTTTTGCAGGGGAGGTGTTGAATTTTTCGGATATCTCAGGTGTTTTTCT ACTGACTGTACCAATATCACGTCACTATCTATCTTCGATCTCACCGTCGA CGAGGGAAAGGGACGGCCGAACCCTTCTGTGTGACCACGGTTCAGTACTC TGGCAAGATGTCCTCGTGACAGGGAGCCCATCGAGCACTGGAAATAAATG TGAAGAAAAAATAAAATAAAAATCTAGATATATATGGAATACCGGTTGAA TCCAACGGGGTCCCGTCTCTAACGTGGGCCAGGTTCCATATTTGATTCAC TGATTTTTCCATTTATACCGACCGGCAGCGACCTGAAACGACACCTGGCG GAAAGCTTCGCGATGGATGCGTCTTCGAACATGCGCTCCTGCTACTACCG GAGCGGCTACGACTTCGCGGTGCCCCTGCGACACAAGGTGGATTCCGCCA ACCTCACCTACGTCGCCCCCTGGCACCGGGAGTACTTCCTCACGGCGAAG GTGAGGGGACGGACAGAAAGAAAGCTGGGCGGCTTGTGCGGGAAGCCGAG AGAGAGAGGGAGAAGAGTCGCGCGAACCGCACGCCTTGGGGGCCTAACGT GCCCTCGAGCTTGGAGGAGATCCCGCCAGACCGATCGATCGATCCCAGGC GGTTTTCGTTTCAGCCCCCCAACGCTGCTCTTTTTCAGGCATGCCTGTGT GTGGTCGTGTTTTTCCCTCAGCCTTTGTACGTAGATAGTCTCTCTACTCC TGTCGACGACTCTCCTGGTCACTGGAAAGAGTTGGGACACCATCCGTCAG GCTGACGCGTTACCATAGGTTGTGTCATATGTACGACGTGTCACACCAGG TACCATCCGCGCCCCCCCCCCCCCAACACACACACACACGCACACACACA AAACGCATAATTTTGTGTGTAACTCGGAATATAGCAACAACTTTCGGTTG TTCACCGTGCCCCGCCCATGCCGAAAGCGCCAGTTCCGCCGCTGCCCTCT TGGAGACCGGCCAGTCATGGCGAGCGGGTGAGGCCCGGACGACCATGATA AAAGTATGTTAGTCGCAAAAGGCACAGGGGGGGGGGGGGGGTTCACCCGA CCTCGGGGTTCTCGTGCTTGTTCAGCGGGCGCGGCGATTCGCGCGCTGTG TGCGTGTTTTCTCTCCCGCTGAAGAGAGCACTGGTCCCCTACCGAATCCA GCCCCCTTCGGTGGTGGTGGAGTGATGCCTCTCCACGAGCGTACGCTTAA GTCTGGCGCGACCAAAAACTCCGTTCCGTTTCGTTTCGGTCGAGAGAAGT TTTTGAGACCGAATGTTAAGGCCGGAGAAGACGCTGTTTATCGATGCTTG GCCGAGAGGGCATCCTACTACTGTAGGCTAAATATATGCTCGTAAGTGTG TCCACAAGAGGGTGTAGCCAAAACCAACCGAACCAACACGAGCACCCTGG GTATTGTAGGAAACGCACAGACGGTTGCTCCGTGTCTCGGGAGCGGAAGA GACGTGCGGACGTTTTGGTTGGCCAACCTGACCGAGGAGGCAAGCCACAC AGGCAGTTGATCACACACACACGCACACACACACAGAGAGAGAGAGAGAG AGAGAGAGAGGCAGCCAGAGAGACAGCCAGAGAGACAGCCCACCCAACCC CGAAAAAAAGACCGTTCTGTGTGTGTGTGTGTGTTTGTGTGTGTTTCTCC TCCCATTATTGGCTTTTTTATTCGTCGTGTGCCCCACTGGCCCCCTTCCT CCACTACGACTAGCTAGACGACCAAACCGGGGTCACACAGGAGGGGGGGT GGTGGGGATGGACCCTCTCCTGCGGTGCCCGCCTGTTTCGTTTTTACCGC GAGCACTATAAACAAATGCTCCTATAAATATGATGTACTACTTCGATGAA AAAACTCCAGGGCAGCCTTTACCTCTCGGGGAACGGGCACGACGAGCGGA TGAGCGTGGTCCAGCTGCACTCCGAGCCGGACGGGGTGGTGGTGGCGCTC AGCTGCTTTGACCTTCACGACGAGCACCTCCTCCCGGAGAACGAGGACTT CTGCATGGCCCTCAACGAGACAGCCTCGCGGCACGAGTACGAGGAGCTCA TGTGAGAGCTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTGGTGGCAGTG GTGGTTGGTGGTGGCGTTCCTGCTGTTATTGATGTTGCTGTTTTTGTTTT CCTTTGTAAATACTCGGAGTATTGGGTTTAGAGGCCTTTTTTGGGGGGGG CGAATCTTGAGTGTTTCATCACCCTCTCGCGGCTGCGGCGTCGGTTGCGT AGCGCATATGTATATAGCGGGCGTGTGATGTGATGTGGTGTGGTGTGACG CGTGGTGCCGTGTGCGTTGCGCTTGTTGGTTGCCCCGAGAACGCAGCTCG CTGGGGCTTTTGTTGTGTGTTTTTTTGCCCTGTTGCCGTCAATTTTGCCT GCCCACTTTGCGATGCGGGCACATTCACATATTTGATCGTTTCTTCCGCT GCATGAATGTTATTGACTGTACATATACTTTTTGCTTTTTGGTGATCTCT CTCGTCTGTACCGACGCAAAAAATACACACACCGCGGCAGGCACACTTGG TTCGAGTTTGTTTAACACTCCGTACGATTCGTCCCTGCCCTCTCTCTCTC TGTCTCTCTGCTGATCTCATCGTTTCGCAAATTACCTAGCTAGAAGCTAA ATATATAATTTATGCATGAAAAACTCCGCCATGATTTGTCTCTCCTCTCC CTCTGCTGACCTCTCATCGGTGCGTGAAATTCATAAATACGTGCACACGC GGGGGCAATTTTTCCTTGAATCCCATCGACGCGCAGGAACACAACCTTCG GCCTGGTGCCGGCGGGGCGCTCGACGGCGACGTACCGCCTCGCCGAGGTC ATGAGCGCCGGCGCCATCCCCGTGTTCGTGGCGAGAGACATCGTGCGCCC GTTTCCGGAGAGAGTTGACTGGTCGTCGCTGTCATTCTCCTTTCCGCCGG AGGAGGTCGGTCCGGCCATGATGGACACCCTGCGCGCGGTGCCGCCGACA GAGCTGTTGGCGATGCAGGTGAAGAAGTGTTGGACGTGTGGGCTAAGGGG AGAAAGAAGGACAGGGGCGTGCGGTGGGTGACTTTTTTTTTTTTTTTTGA TGGGCGGGGAGCGAAAAGAGAGGAAGGGGTTGGCGGCGGCGGCGGCGGGG GTGAGGTTTTTATGTATTTGTCGCCTCTTTGTGTCGGCTTAGGGGGGACG GGGCGTGTGTCGATGTTATCGTGCCCTTGCCTACCCCCCCCTCCCCCCTG TCCTCTCCGAAAAACGGATTCATGTTAATATCTTGCCAGCTCACGACTTA CTTCGTGTCTCACTGCTGTACATTAGCGCTAACCCGCAGATGGGGTACCC CTTGTCGGCCTACCGTAGGTGACACAAGATACTACACCCCCTGGACTGAA TTTTAGAGCTCCATTACTCCGTAACGAAGAAGGTGCCAGCACCAAACGAA ACCTTTTCGGACAGCCCTCGGCTAGATATTTCCAACGCTACCATTTTTGG CACTGTCGCTCTTCTTGCTGAGGAGGAATCGAGCTTCGAAAATCTGCCCA GGGGGTGTGGTATCTTGTGTCACCTACGGTATTGCTTTCGAAGTTGAAGG GTGGATGGGCGCGCACTCTCTGCACTGCCGCTGTGCTGAGAATTTTCGTG AGATCTGACGGAGACGGTGCAGAGGAAGGAGTGCGAACGAGTAGTCACGG GTGGAGGCACGCTGATTGTTTCGTACGATCAATATATCTAGGGGTCGGGA AAGGGCGGGGGCTCCTCAGAGACGTTCTTGGCACTGTATGGTATGCCTCT TGTCTTCTGGCGGCAAGGTCTAGTCGGGCGCCGATTGCTTCTCTCGTTAG ATCCTCTTGGTGCATGATACAACGAACACGCCCGGGGGGGGGGGGGGGGG GGGGGCGGCTTTTCCCCCCCGGGGGGGGGGGGGGGAAAAAAAAACAGGTC CTCCGCGGGAAGTTTTTTNNNNNNNNNNGTGTTCTTTTTTTCCGCTGTTT TCCCGTTTGGGGGGACAAGCAGCCCCGCCGGGGGGGGGGGGGGGGGGGGG GGGCGTGTACTGCTTGTCTCACGCAGAGGGATAGTTGGCAATGACAAGCA TGTCTGCCGCGGAAAGTCTATTATGCCACAATTAGGGGGTATTTTATAAT ATCGTGAATTATAGAAGTATGTATGGTAGCCATGCAACCGGCGGCCCCAA AGGCCCAAACCTTTCTGGCAAGCAGCGAGCGCCGTTGTCCCAACCAACGA CTAACACCCGCCCCGCTGCGCCGCTCCCTCTCTCTCTCTCTCCCCCCTTA CCGTATCTGTCTTTCGTCTGGGCGGCACGAACAAAACAAACACAGCAAAA ATCGGTGGAGGCGTTTCTCGATATTTTTGGCGAGGAGCCGGGGTACGACA GGATCGCTCGCGTCGTCATCGACGAGCTGGTGAAGCGGGTCGGCCATCAC CGATAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5006:730..8535-

>mRNA_L-elsbetiae_contig5006.13013.1 ID=mRNA_L-elsbetiae_contig5006.13013.1|Name=mRNA_L-elsbetiae_contig5006.13013.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3120bp|location=Sequence derived from alignment at L-elsbetiae_contig5006:730..8535- (Laminarionema elsbetiae ELsaHSoW15)
GTGAGCAGGCGTCGCGGGCTCCACCTCCTGTGTTGGACGCCGTGCGTCCT
GTTGGCGTGCTTCTGGGCGTCGAGGTGGACGGCAGAGTTCAGTTCTGCGA
CCTCGGCGGGGGGGCGTCCCGGTGTGCTCGGGCTTCGAGTCGCGGAGGAT
CATGCTCCCGATGACGGAGGCGAGGATCCAGAGCTGGCCTATTGGTACCC
CATCCCAGACCGCATCGTGCCGATACGACGCTCAGGAGAGGTCGACGAGT
ATATGACCGGCGCTGACATGTTGCGCCTGCTGGAGGCGGCCCGTCTCCGG
AACACCACCGCCGCCGCCGCCGCCGCCGACGCAGCAGCAGGGCATCAGCA
GCACCACGACGCGAGAAAGATCGCGCCGATAGCGAACGTGCACGCGGCGG
AGGCGCTCGGCGACAGCGACGTCCGCTCTGTCACCACCGTCTTCGCCCCC
GGGTGGAGCGGCATGCCGACCGCCGGCAACCGCTGCTCCTCCGTCAACAT
GTCCGCCATCGCTCCGAGCATGGCGTGCGGCGCGCCGCTCGCGGCGCCCT
GCTTCGACCACGGCCGCTGCCGCCCGCGCGCCGCCGGCGGGCCGGGCCCG
TCCATCTACGTCTTCGATGCCGCCTGCTCCCTCGCCAACAGCTCCGCGCT
CCCGCCCAGCACGGAGAGCCTGATGCTGAGCCACACGTGGAGGGAGATGG
CCAGGGCTGCCGGGGTGTTATCGGAGACCTACCGGGACGCTTGCCTGTTC
CTGCACGTGAACAAGCGGCTGGGGGTCGTCCCGTGCCCCGTGGAGGGTCC
GCTGTGGGACGGGGGGAGGAATCACGTGATGGTGGATTTCACCGACGGTA
CCCGGTGAGCAGGCGTCGCGGGCTCCACCTCCTGTGTTGGACGCCGTGCG
TCCTGTTGGCGTGCTTCTGGGCGTCGAGGTGGACGGCAGAGTTCAGTTCT
GCGACCTCGGCGGGGGGGCGTCCCGGTGTGCTCGGGCTTCGAGTCGCGGA
GGATCATGCTCCCGATGACGGAGGCGAGGATCCAGAGCTGGCCTATTGGT
ACCCCATCCCAGACCGCATCGTGCCGATACGACGCTCAGGAGAGGTCGAC
GAGTATATGACCGGCGCTGACATGTTGCGCCTGCTGGAGGCGGCCCGTCT
CCGGAACACCACCGCCGCCGCCGCCGCCGCCGACGCAGCAGCAGGGCATC
AGCAGCACCACGACGCGAGAAAGATCGCGCCGATAGCGAACGTGCACGCG
GCGGAGGCGCTCGGCGACAGCGACGTCCGCTCTGTCACCACCGTCTTCGC
CCCCGGGTGGAGCGGCATGCCGACCGCCGGCAACCGCTGCTCCTCCGTCA
ACATGTCCGCCATCGCTCCGAGCATGGCGTGCGGCGCGCCGCTCGCGGCG
CCCTGCTTCGACCACGGCCGCTGCCGCCCGCGCGCCGCCGGCGGGCCGGG
CCCGTCCATCTACGTCTTCGATGCCGCCTGCTCCCTCGCCAACAGCTCCG
CGCTCCCGCCCAGCACGGAGAGCCTGATGCTGAGCCACACGTGGAGGGAG
ATGGCCAGGGCTGCCGGGGTGTTATCGGAGACCTACCGGGACGCTTGCCT
GTTCCTGCACGTGAACAAGCGGCTGGGGGTCGTCCCGTGCCCCGTGGAGG
GTCCGCTGTGGGACGGGGGGAGGAATCACGTGATGGTGGATTTCACCGAC
GGTACCCGCGACCTGAAACGACACCTGGCGGAAAGCTTCGCGATGGATGC
GTCTTCGAACATGCGCTCCTGCTACTACCGGAGCGGCTACGACTTCGCGG
TGCCCCTGCGACACAAGGTGGATTCCGCCAACCTCACCTACGTCGCCCCC
TGGCACCGGGAGTACTTCCTCACGGCGAAGCGACCTGAAACGACACCTGG
CGGAAAGCTTCGCGATGGATGCGTCTTCGAACATGCGCTCCTGCTACTAC
CGGAGCGGCTACGACTTCGCGGTGCCCCTGCGACACAAGGTGGATTCCGC
CAACCTCACCTACGTCGCCCCCTGGCACCGGGAGTACTTCCTCACGGCGA
AGGGCAGCCTTTACCTCTCGGGGAACGGGCACGACGAGCGGATGAGCGTG
GTCCAGCTGCACTCCGAGCCGGACGGGGTGGTGGTGGCGCTCAGCTGCTT
TGACCTTCACGACGAGCACCTCCTCCCGGAGAACGAGGACTTCTGCATGG
CCCTCAACGAGACAGCCTCGCGGCACGAGTACGAGGAGCTCATGGCAGCC
TTTACCTCTCGGGGAACGGGCACGACGAGCGGATGAGCGTGGTCCAGCTG
CACTCCGAGCCGGACGGGGTGGTGGTGGCGCTCAGCTGCTTTGACCTTCA
CGACGAGCACCTCCTCCCGGAGAACGAGGACTTCTGCATGGCCCTCAACG
AGACAGCCTCGCGGCACGAGTACGAGGAGCTCATGAACACAACCTTCGGC
CTGGTGCCGGCGGGGCGCTCGACGGCGACGTACCGCCTCGCCGAGGTCAT
GAGCGCCGGCGCCATCCCCGTGTTCGTGGCGAGAGACATCGTGCGCCCGT
TTCCGGAGAGAGTTGACTGGTCGTCGCTGTCATTCTCCTTTCCGCCGGAG
GAGGTCGGTCCGGCCATGATGGACACCCTGCGCGCGGTGCCGCCGACAGA
GCTGTTGGCGATGCAGGAACACAACCTTCGGCCTGGTGCCGGCGGGGCGC
TCGACGGCGACGTACCGCCTCGCCGAGGTCATGAGCGCCGGCGCCATCCC
CGTGTTCGTGGCGAGAGACATCGTGCGCCCGTTTCCGGAGAGAGTTGACT
GGTCGTCGCTGTCATTCTCCTTTCCGCCGGAGGAGGTCGGTCCGGCCATG
ATGGACACCCTGCGCGCGGTGCCGCCGACAGAGCTGTTGGCGATGCAGCA
AAAATCGGTGGAGGCGTTTCTCGATATTTTTGGCGAGGAGCCGGGGTACG
ACAGGATCGCTCGCGTCGTCATCGACGAGCTGGTGAAGCGGGTCGGCCAT
CACCGATAACAAAAATCGGTGGAGGCGTTTCTCGATATTTTTGGCGAGGA
GCCGGGGTACGACAGGATCGCTCGCGTCGTCATCGACGAGCTGGTGAAGC
GGGTCGGCCATCACCGATAA
back to top