mRNA_L-elsbetiae_contig5.12999.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: D7G2F8_ECTSI (DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F8_ECTSI) HSP 1 Score: 221 bits (564), Expect = 1.520e-68 Identity = 104/143 (72.73%), Postives = 130/143 (90.91%), Query Frame = 1 Query: 1 NEPERVRGVGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPG----ACGSYRRGKSNCGDVDVLIRPP 417 +EP+RVRG+GDSVMKELSTFYEEGRM+RL+GLEADP+++ L++ Q++ WVG +KA++L+D G+RSIED+R +G H+L+EQ +ICLSRHEDI+QRMPRSEAAEIEA+V +VAQSICPG ACGSYRRGKS+CGDVDVLIRPP Sbjct: 90 HEPQRVRGLGDSVMKELSTFYEEGRMHRLDGLEADPKLKCLKILQEVGWVGAVKAQQLYDKGVRSIEDLRTKGLHLLSEQAQICLSRHEDIMQRMPRSEAAEIEAVVTKVAQSICPGVICQACGSYRRGKSHCGDVDVLIRPP 232
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: A0A6H5JHQ3_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ3_9PHAE) HSP 1 Score: 223 bits (568), Expect = 1.410e-65 Identity = 102/139 (73.38%), Postives = 127/139 (91.37%), Query Frame = 1 Query: 1 NEPERVRGVGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPGACGSYRRGKSNCGDVDVLIRPP 417 +EP+RVRG+GDSVMKEL+TFYEEGRM RL+ LEADP+++ L++FQ++ WVG +KA++L+D G+RSIED+R +G H+L+EQ +ICL+RHEDI QRMPRSEAAEIEA+V VAQSICPGACGSYRRGKS+CGDVDVLIRPP Sbjct: 566 HEPQRVRGLGDSVMKELATFYEEGRMYRLDELEADPKLKCLKIFQEVGWVGAVKAQQLYDQGIRSIEDLRTKGLHLLSEQAQICLNRHEDITQRMPRSEAAEIEAVVTRVAQSICPGACGSYRRGKSHCGDVDVLIRPP 704
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: D7G2F7_ECTSI (DNA polymerase lambda n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F7_ECTSI) HSP 1 Score: 187 bits (475), Expect = 7.090e-53 Identity = 97/146 (66.44%), Postives = 114/146 (78.08%), Query Frame = 1 Query: 1 NEPERVRGVGDSVMKELSTFYEEGR-MNRLEGLEADPRVRS--LELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPG----ACGSYRRGKSNCGDVDVLIRPP 417 N+PERVRGVGD MKEL+ F EG+ +R ADP L+LFQ++ WVG +KAR+L+D G+RSIED+R G+ +LTEQ R+CL+RHEDI QRMPRSEAAEIEA V +VAQSICPG ACGSYRRGKSNCGDVDVLIRPP Sbjct: 346 NDPERVRGVGDGAMKELTAFLAEGKGKSRAPVSGADPPAPEACLKLFQEVGWVGAVKARQLYDKGMRSIEDLRTSGRDLLTEQMRVCLNRHEDIKQRMPRSEAAEIEAAVTKVAQSICPGVICQACGSYRRGKSNCGDVDVLIRPP 491
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: A0A6H5JQ91_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ91_9PHAE) HSP 1 Score: 147 bits (370), Expect = 2.460e-38 Identity = 78/138 (56.52%), Postives = 92/138 (66.67%), Query Frame = 1 Query: 58 FYEEGRMNRLEGLEADPRV--RSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPG----------------ACGSYRRGKSNCGDVDVLIRPP 417 F R R E DP L+LFQ++ WVG +K ++L+D G+RSIE++R RG+H+LTEQ R CL+RHEDI RMPRSEAAEIEA V +VAQSICPG ACGSYRR K NCGDVDVLIRPP Sbjct: 326 FLPRARARRSPVSEVDPPTVEACLKLFQEVGWVGAVKTQQLYDKGMRSIENLRTRGRHLLTEQVRFCLNRHEDIKPRMPRSEAAEIEAAVTKVAQSICPGVICQASFLTSPRRRTEACGSYRRVKRNCGDVDVLIRPP 463
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: A0A8B7XIU3_ACAPL (DNA polymerase n=4 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XIU3_ACAPL) HSP 1 Score: 114 bits (285), Expect = 6.360e-27 Identity = 59/142 (41.55%), Postives = 89/142 (62.68%), Query Frame = 1 Query: 4 EPERVRGVGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPG----ACGSYRRGKSNCGDVDVLIRPP 417 E ++ G+G + ++S E G + +++ + +++L++F +I VGP A+E G R+++DVRE+ + LT Q +I L +ED ++RMPR EA EIE V E+A+S PG CGSYRRGK+ CGDVDVLI P Sbjct: 352 EANKIPGIGTRLADKISEILESGHLRKIDHVCGGEDMKALDIFNQIWGVGPTVAQEWVQLGFRTLDDVREKAK--LTRQQKIGLKHYEDFLERMPRQEAGEIERTVREMAESATPGMLAVVCGSYRRGKATCGDVDVLITHP 491
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: K1PLM1_CRAGI (DNA polymerase n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1PLM1_CRAGI) HSP 1 Score: 107 bits (268), Expect = 1.470e-26 Identity = 58/142 (40.85%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 4 EPERVRGVGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPGA----CGSYRRGKSNCGDVDVLIRPP 417 E + GVG + ++ E G + +L AD ++ +ELF + G AR+ F G R+++D+R + + LT Q +I L +EDI+ RMPR+EAA IE +V E A+ + PG CGSYRRGK CGDVDVL+ P Sbjct: 36 EARALPGVGTRLADKIWEIAESGELRKLNEFNADKDIKVIELFTNVWGAGAHTARQWFQQGFRTLDDLRTKAK--LTHQQKIGLKHYEDILDRMPRTEAAAIEQVVREAAEFLAPGVIAQCCGSYRRGKPTCGDVDVLLTHP 175
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: UPI0018D8C18B (DNA polymerase lambda-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8C18B) HSP 1 Score: 110 bits (276), Expect = 1.300e-25 Identity = 59/142 (41.55%), Postives = 87/142 (61.27%), Query Frame = 1 Query: 4 EPERVRGVGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPG----ACGSYRRGKSNCGDVDVLIRPP 417 E ++ G+G + ++S E G + +++ + +++L++F I VGP A+E G R+++DVRE+ + L Q +I L +ED +QRM R EA EIE V E+A+SI PG CGSYRRGK+ CGDVDVLI P Sbjct: 353 EANKIPGIGTRLADKISEILESGHLRKIDHVCGGEDMKALDIFNNIWGVGPTVAQEWVQLGYRTLDDVREKAK--LNRQQKIGLKHYEDFLQRMQREEAGEIERTVREMAESIDPGMLAVVCGSYRRGKTTCGDVDVLITHP 492
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: A0A7R8WZ31_9CRUS (DNA polymerase lambda (Fragment) n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8WZ31_9CRUS) HSP 1 Score: 109 bits (272), Expect = 2.200e-25 Identity = 57/138 (41.30%), Postives = 85/138 (61.59%), Query Frame = 1 Query: 16 VRGVGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPG----ACGSYRRGKSNCGDVDVLIRPP 417 + G+G S+ ++ E+G++ + E L +VR+LELF I VG A + GLR++ DV+ + LT Q +I L +D+++RM R+EA EI A++ + + +CPG ACGSYRRGKS CGDVDVL+ P Sbjct: 185 LHGIGPSLADKIWEIVEQGKLRKAEKLSEGEKVRTLELFTSIWGVGATTAELWYGMGLRNLNDVKTKAH--LTHQQQIGLKCFDDLLERMSRAEAGEIAAVIRKAVEELCPGTQTFACGSYRRGKSTCGDVDVLVTHP 320
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: UPI0003596D47 (DNA polymerase lambda n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003596D47) HSP 1 Score: 108 bits (271), Expect = 5.730e-25 Identity = 57/135 (42.22%), Postives = 84/135 (62.22%), Query Frame = 1 Query: 25 VGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPG----ACGSYRRGKSNCGDVDVLIRPP 417 +G + ++ E G + +L+ L++ VR LE F + GP A++ F G R+IED++E+ LT Q ++ + ++D++ RMPR EAAEIE +V E A+SI G ACGSYRRGK+ CGDVDVL+ P Sbjct: 318 IGKRLADKIWEIAESGELRKLQELKSSEEVRVLETFTNVWGAGPTTAQQWFQQGFRTIEDLKEKAH--LTHQQKVGVRLYQDLLDRMPREEAAEIEKVVREAAESIQEGVVAQACGSYRRGKATCGDVDVLVTHP 450
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: A0A8B8EPU1_CRAVI (DNA polymerase n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EPU1_CRAVI) HSP 1 Score: 107 bits (268), Expect = 8.500e-25 Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 1 Query: 4 EPERVRGVGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPGA----CGSYRRGKSNCGDVDVLIRPP 417 E + GVG + ++ E G + +L AD ++ +ELF + G AR+ F G R+++D+R + + LT Q RI L ++DI+ RMPR EAA IE +V E A+ + PG CGSYRRGK CGDVDVL+ P Sbjct: 271 EARNLPGVGTRLADKIWEIAESGELRKLNEFNADEDIKVIELFTNVWGAGAHTARQWFQQGFRTLDDLRTKAK--LTHQQRIGLKHYDDILDRMPRMEAAAIEQVVREAAEFLAPGVIAQCCGSYRRGKPTCGDVDVLVTHP 410 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5.12999.1 >prot_L-elsbetiae_contig5.12999.1 ID=prot_L-elsbetiae_contig5.12999.1|Name=mRNA_L-elsbetiae_contig5.12999.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=139bp NEPERVRGVGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVback to top mRNA from alignment at L-elsbetiae_contig5:98912..99927+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5.12999.1 ID=mRNA_L-elsbetiae_contig5.12999.1|Name=mRNA_L-elsbetiae_contig5.12999.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1016bp|location=Sequence derived from alignment at L-elsbetiae_contig5:98912..99927+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5:98912..99927+ >mRNA_L-elsbetiae_contig5.12999.1 ID=mRNA_L-elsbetiae_contig5.12999.1|Name=mRNA_L-elsbetiae_contig5.12999.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=834bp|location=Sequence derived from alignment at L-elsbetiae_contig5:98912..99927+ (Laminarionema elsbetiae ELsaHSoW15)back to top |