mRNA_L-elsbetiae_contig4998.12995.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4998.12995.1 vs. uniprot
Match: D7FLZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLZ7_ECTSI) HSP 1 Score: 578 bits (1489), Expect = 6.360e-195 Identity = 369/632 (58.39%), Postives = 419/632 (66.30%), Query Frame = 1 Query: 1 MQDFRTAVGSLRLAVRMDRSALNVRQRLAE----QGMVWVDGGDPEAALACFEEACTVDGANASVHFCKTVALVKLARFGEALRAMEAVLGRRKGTADDYVLRAKIRWALGMVGPGNNDMKAARALQSDHPEVVMFGRRCLGDAATLYAKAKMFADAGDDQMAVKVLNQVAELTPDDIKVPIVRAACKHRRLKDFMGALRDYDESSFRHFEGVHVGRRALNQAADRLRSLRGIVVVGTSSESQDGEEREVGTISAXXXXXXXXXXXXXXQREAQVDTTVSSAAGA--------GWKNAISADISGSYEPAPVVAGXXXXXXXXXXDVERVKVHGGGSNNGS-----GKAVADEGCTIPAGETAGRGAAXXXXXXXXXADTGRIEKTVEAQAVHERLDEAELRLRFRLAIPHAGPDPAYDLRPSAHFAQQQRFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEVEGEV---EGYTEPAYITRQRCLVLNDWALSLFEGGEYAKAVLALDIAIMGGKAFARVTGGAMESKFYLNRGDCYRASGAAEMAVCDYKRALEVEPGNWMVKTRLSLAHYLKGNSLFNDGDFSQAKSELDVAVAYNWKV 1836 +QD RTAVG LRLAVRMD+SALNVRQRLAE QGMVW+DGGD EAALACFEEACTVDGANASVHFCKTVALVKL RF EALR++EAVLGRRKGTADDYVLRAKIRWA+GMVGPGN D+ A+ LQSDHPEVVMFGRRCLG+A LYAKAK ADAGDD AVK+LNQVA+LTP+D+KVPI+RAACK RRLKDF GAL DYDE SFRHF VHVGRRAL++AA RLRS + S+ GE+ G + R A D +++A+G G +N+ S ++G + V V K GGG + + G+A E P E+ + RI++ +E Q ERL + ELR FRLAIPHAGPDP Y LRP F QQ XXXXXXXXXXXXXXXXXXXX G++ +GE EGY+EP YITRQRCLVLNDWALSLFE GEY KAV ALD+AI G +A A TGGAMESKF+LNRGDCYR SG AEMAV DY RALEVEP NWMVKTRLS+AHYLKG+SLFNDG+F +AKSELD A+AYNWKV Sbjct: 202 LQDLRTAVGCLRLAVRMDKSALNVRQRLAEVLLSQGMVWLDGGDSEAALACFEEACTVDGANASVHFCKTVALVKLGRFVEALRSVEAVLGRRKGTADDYVLRAKIRWAVGMVGPGNIDLGIAKTLQSDHPEVVMFGRRCLGNAEGLYAKAKELADAGDDVRAVKILNQVADLTPEDVKVPIMRAACK-RRLKDFAGALCDYDECSFRHFREVHVGRRALDRAASRLRSR---------ASSRRGED--TGRLGVAVPGGLGGGAGIEGAR-AGGDVVLAAASGQVVDGENTEGVENSASDALAGGGDVGKVTG--EKGEQDTPAGVRETKRGGGGGDGENATVEPGRAGVSESPFPPLSESINTAERGTDPPRLSTTEASRIQEDMEMQVDCERLADEELRRMFRLAIPHAGPDPTYTLRP---FQPQQXXXXXXXXXXXXXXXXXXXXXXXSSAPSGGIPSEGKGGLLKTVIIEGER-----------GQQSQGEGKEREGYSEPPYITRQRCLVLNDWALSLFEFGEYEKAVYALDLAIDGDRASALATGGAMESKFFLNRGDCYRGSGDAEMAVRDYTRALEVEPSNWMVKTRLSMAHYLKGHSLFNDGNFLEAKSELDTAIAYNWKV 804
BLAST of mRNA_L-elsbetiae_contig4998.12995.1 vs. uniprot
Match: A0A6H5K4B5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4B5_9PHAE) HSP 1 Score: 263 bits (671), Expect = 2.850e-78 Identity = 136/162 (83.95%), Postives = 145/162 (89.51%), Query Frame = 1 Query: 1 MQDFRTAVGSLRLAVRMDRSALNVRQRLAEQGMVWVDGGDPEAALACFEEACTVDGANASVHFCKTVALVKLARFGEALRAMEAVLGRRKGTADDYVLRAKIRWALGMVGPGNNDMKAARALQSDHPEVVMFGRRCLGDAATLYAKAKMFADAGDDQMAVKV 486 +QD RTAVG LRLAVRMD+SALNVRQRLAE GMVW+DGGD EAALACFEEACTVDGANASVH CKTVALVKL RF EALR++EAVLGRRKGTADDYVLRAKIRWA+GMVGPGN D+ A+ LQSDHPEVVMFGRRCLG+A LYAKAK ADAGDD AVKV Sbjct: 229 LQDLRTAVGCLRLAVRMDKSALNVRQRLAE-GMVWLDGGDSEAALACFEEACTVDGANASVHSCKTVALVKLGRFVEALRSVEAVLGRRKGTADDYVLRAKIRWAVGMVGPGNIDLGIAKTLQSDHPEVVMFGRRCLGNAEGLYAKAKELADAGDDVRAVKV 389
BLAST of mRNA_L-elsbetiae_contig4998.12995.1 vs. uniprot
Match: A0A6H5K7M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M7_9PHAE) HSP 1 Score: 139 bits (349), Expect = 5.330e-34 Identity = 117/237 (49.37%), Postives = 127/237 (53.59%), Query Frame = 1 Query: 1129 ERLDEAELRLRFRLAIPHAGPDPAYDLRPSAHFAQQQRFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEVEG-EVEGYTEPAYITRQRCLVLNDWALSLFEGGEYAKAVLALDIAIMGGKAFARVTGGAMESKFYLNRGDCYRASGAAEMAVCDYKRALEVEPGNWMVKTRLSLAHYLKGNSLFNDGDFSQAKSELDVAVAYNWKV 1836 ERL + ELR RFRLAIPHAGPDP Y LR QQ XXXXXXXXXXXXXXXXXXX + EG E EGY+EP YITRQRCLVLNDWALSLFE GEY KAV ALD+AI G +A A TGGAMESKF+LNR G+SLFNDG+F +AKSELD A+AYNWKV Sbjct: 9 ERLADEELRRRFRLAIPHAGPDPTYILR---SLEPQQXXXXXXXXXXXXXXXXXXXXXXLSSTLSGGIPSEGNGGLLKTVIIEGERGQQ---------SQAEGKEREGYSEPPYITRQRCLVLNDWALSLFEVGEYEKAVYALDLAIDGDRASALATGGAMESKFFLNRQG---------------------------------------GHSLFNDGNFLEAKSELDTAIAYNWKV 194
BLAST of mRNA_L-elsbetiae_contig4998.12995.1 vs. uniprot
Match: A0A6G0WXA7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXA7_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.470e-15 Identity = 49/124 (39.52%), Postives = 78/124 (62.90%), Query Frame = 1 Query: 1468 ITRQRCLVLNDWALSLFEGGEYAKAVLALDIAIMGGKAFA-RVTGGAMESKFYLNRGDCYRASGAAEMAVCDYKRALEVEPGNWMVKTRLSLAHYLKGNSLFNDGDFSQAKSELDVAVAYNWKV 1836 IT QR L+LND A+S + G + A+ A+++AI A R+ G ++ +FY+NRGDCYRA ++ A+ DY ALE++P + + TR+++ Y G LFN G F +A+ E +A+ +N K+ Sbjct: 315 ITHQRNLILNDVAVSEIKNGRFEAALNAMNLAIDAEVTMASRLAGRVIDYRFYVNRGDCYRALSKSQAALVDYNCALELQPMDAEIHTRIAMIRYHFGLELFNRGAFDKAEIEFTLAIRHNPKI 438
BLAST of mRNA_L-elsbetiae_contig4998.12995.1 vs. uniprot
Match: A0A1V9ZYE2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYE2_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.050e-14 Identity = 52/135 (38.52%), Postives = 80/135 (59.26%), Query Frame = 1 Query: 1426 EVEGEVEGYTEPAYITRQRCLVLNDWALSLFEGGEYAKAVLALDIAIMGGKAFA-RVTGGAMESKFYLNRGDCYRASGAAEMAVCDYKRALEVEPGNWMVKTRLSLAHYLKGNSLFNDGDFSQAKSELDVAVAYN 1827 ++ VE + E ITRQR LVLND A++ + G Y A+ A++ AI A + R G ++ +FY+NRGDCYRA + A+ DY ALE++P + + TR+++ Y G LFN F +A+ E +A+ +N Sbjct: 285 QIVSNVEEHPE---ITRQRNLVLNDMAIAYVKLGHYDAALTAMNKAIASEMATSSRFDGKVIDYRFYINRGDCYRALSKFQPALADYNTALELQPLDKDIHTRIAMIRYHFGIELFNRAAFDKAEIEFTMAIRHN 416
BLAST of mRNA_L-elsbetiae_contig4998.12995.1 vs. uniprot
Match: T0SI81_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SI81_SAPDV) HSP 1 Score: 87.4 bits (215), Expect = 2.100e-14 Identity = 46/124 (37.10%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 1468 ITRQRCLVLNDWALSLFEGGEYAKAVLALDIAIMGG-KAFARVTGGAMESKFYLNRGDCYRASGAAEMAVCDYKRALEVEPGNWMVKTRLSLAHYLKGNSLFNDGDFSQAKSELDVAVAYNWKV 1836 I+RQR L+LND A+ + G++ + A++ AI + +R G A++ ++Y+NRGDCYRA G + A+ DY A E++P + + TR+++ Y G LFN F +A+ E A+ +N KV Sbjct: 295 ISRQRNLILNDMAIMHIQAGDFEAGLTAMNQAIASEIETSSRFEGKAIDYRYYINRGDCYRALGKLQAALADYNTARELQPTDTEIHTRIAMIRYHFGLELFNRAAFDKAEIEFSSAIRHNHKV 418
BLAST of mRNA_L-elsbetiae_contig4998.12995.1 vs. uniprot
Match: A0A485LHM4_9STRA (Aste57867_21000 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LHM4_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 3.160e-14 Identity = 49/124 (39.52%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 1468 ITRQRCLVLNDWALSLFEGGEYAKAVLALDIAIMGGKAFA-RVTGGAMESKFYLNRGDCYRASGAAEMAVCDYKRALEVEPGNWMVKTRLSLAHYLKGNSLFNDGDFSQAKSELDVAVAYNWKV 1836 ITRQR L+LND A++ + G Y A+ A+++AI A R G ++ +FY+NRGDCYRA + A+ DY ALE++P + + TR+++ Y G FN G F +A+ E +A+ +N K+ Sbjct: 336 ITRQRNLILNDIAVAEIKRGNYDAALNAMNLAIESEVTTASRFDGRVIDYRFYVNRGDCYRALSKCQPALADYNCALELQPLDAEIHTRIAMIRYHFGLEQFNRGAFDKAEIEFTLAIRHNDKI 459
BLAST of mRNA_L-elsbetiae_contig4998.12995.1 vs. uniprot
Match: F0YK37_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK37_AURAN) HSP 1 Score: 87.4 bits (215), Expect = 4.290e-14 Identity = 71/236 (30.08%), Postives = 104/236 (44.07%), Query Frame = 1 Query: 1 MQDFRTAVGSLRLAVRMDRSA-LNVRQRLAE----QGMVWVDGGDPEAALACFEEACTVDGANASVHFCKTVALVKLARFGEALRAMEAVLGRRKGT----------ADDYVLRAKIRWALGMVGPGNNDMKAARALQSDHPEVVMFGRRCLGDAATLYAKAKMFADAGDDQMAVKVLNQVAELTPDDIKVPIVRAACKHRRLKDFMGALRDYDESSFRHFEGVHVGRRALNQAAD 663 + D +A+ LR V + VR RLA +G W+ GD AAL CF+EA +D ++ +A KL F ALR + + A+ +VLRAK+ WALG++ G DM A +L DH EV F +A LY A D A+K+L + P DIK+ + RA+ HR+ AL D ++S + R + + A+ Sbjct: 57 LYDLHSAIIDLRYVVVQGQGVHAAVRHRLATILDLRGFCWLRAGDARAALECFKEASQLDPLSSRFFAHCAIAHTKLKEFDAALRHISRAIDLDTNLVSGNSPDPSYAEQFVLRAKLYWALGLIDVGIKDMSMAMSLAPDHIEVRRFNDMMQRKSAELYRTALNHMMHHDFSSAIKLLTAALRIAPRDIKLLVTRASA-HRQAGACDIALVDLSQASTAFCHSMRPSSRTVEEQAN 291
BLAST of mRNA_L-elsbetiae_contig4998.12995.1 vs. uniprot
Match: A0A024U2Z9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2Z9_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 6.970e-14 Identity = 45/122 (36.89%), Postives = 73/122 (59.84%), Query Frame = 1 Query: 1468 ITRQRCLVLNDWALSLFEGGEYAKAVLALDIAIMGGKAF--ARVTGGAMESKFYLNRGDCYRASGAAEMAVCDYKRALEVEPGNWMVKTRLSLAHYLKGNSLFNDGDFSQAKSELDVAVAYN 1827 ITRQR L+LND A++ + G Y A+ A+++ + + +R G ++ +FY+NRGDCYRA A+ DY ALE++P + + TR+++ Y G FN G F +A+ E +A+ +N Sbjct: 316 ITRQRNLILNDVAVAEIQSGRYDAALNAMNLQAIASEVATASRFDGSVIDYRFYVNRGDCYRAQSKNHAALADYNSALELQPMDADIHTRVAIIRYQFGLEQFNRGAFDKAEVEFTLAIRHN 437
BLAST of mRNA_L-elsbetiae_contig4998.12995.1 vs. uniprot
Match: A0A1V9Z8Y4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8Y4_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.470e-13 Identity = 48/134 (35.82%), Postives = 77/134 (57.46%), Query Frame = 1 Query: 1438 EVEGYTEPAYITRQRCLVLNDWALSLFEGGEYAKAVLALDIAIMGGKAFA-RVTGGAMESKFYLNRGDCYRASGAAEMAVCDYKRALEVEPGNWMVKTRLSLAHYLKGNSLFNDGDFSQAKSELDVAVAYNWKV 1836 E++ E I+RQR LVLND A+ G Y A+ A++ AI A + R G ++ ++Y+NRGDCYRA A+ DY AL+++P + + +R+++ Y G LFN F +A+ E +A+ +N +V Sbjct: 278 EIDPVDEHPEISRQRNLVLNDMAIEYLRQGRYEDALTAMNQAIASEFATSSRFEGKVIDYRYYINRGDCYRALSKFLPALADYNTALDLQPTDVEIHSRIAMIRYHFGLDLFNRAAFDKAEVEFSMAIRHNHRV 411 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4998.12995.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4998.12995.1 >prot_L-elsbetiae_contig4998.12995.1 ID=prot_L-elsbetiae_contig4998.12995.1|Name=mRNA_L-elsbetiae_contig4998.12995.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=620bp MQDFRTAVGSLRLAVRMDRSALNVRQRLAEQGMVWVDGGDPEAALACFEEback to top mRNA from alignment at L-elsbetiae_contig4998:3122..12490- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4998.12995.1 ID=mRNA_L-elsbetiae_contig4998.12995.1|Name=mRNA_L-elsbetiae_contig4998.12995.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9369bp|location=Sequence derived from alignment at L-elsbetiae_contig4998:3122..12490- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4998:3122..12490- >mRNA_L-elsbetiae_contig4998.12995.1 ID=mRNA_L-elsbetiae_contig4998.12995.1|Name=mRNA_L-elsbetiae_contig4998.12995.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3720bp|location=Sequence derived from alignment at L-elsbetiae_contig4998:3122..12490- (Laminarionema elsbetiae ELsaHSoW15)back to top |