mRNA_L-elsbetiae_contig499.12983.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig499.12983.1 vs. uniprot
Match: D8LDU0_ECTSI (Radial spoke protein 10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDU0_ECTSI) HSP 1 Score: 257 bits (656), Expect = 4.650e-84 Identity = 157/166 (94.58%), Postives = 160/166 (96.39%), Query Frame = 3 Query: 90 MGDEEVEYKAEYLDTAEDAEPEVANWLPRPGKAKVTYAEGSSFEGVFNGERIKEGSGKYTWMKPAEEDGEDPQVHAIFEGNYKDGKKAGLGKMTYPNGDEYTGEWKDNVMEGEGTYIYKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGTITEGKWVFK 587 MGDEEVEYKAEYLDTAEDAEPEVANWLPRPGKAKVTYAEGSSFEGVFNGERIK+G GKYTWMKPAEEDGEDPQVHA +EGNY DGKKAG GKMTYPNGDEYTGEWKDN MEGEGTY+YKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGTITEG WVFK Sbjct: 1 MGDEEVEYKAEYLDTAEDAEPEVANWLPRPGKAKVTYAEGSSFEGVFNGERIKDGPGKYTWMKPAEEDGEDPQVHATYEGNYTDGKKAGTGKMTYPNGDEYTGEWKDNAMEGEGTYVYKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGTITEGTWVFK 166
BLAST of mRNA_L-elsbetiae_contig499.12983.1 vs. uniprot
Match: A0A835Z6C0_9STRA (Radial spoke protein 10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6C0_9STRA) HSP 1 Score: 184 bits (466), Expect = 3.470e-55 Identity = 120/166 (72.29%), Postives = 134/166 (80.72%), Query Frame = 3 Query: 90 MGDEEVEYKAEYLDTAEDAEPEVANWLPRPGKAKVTYAEGSSFEGVFNGERIKEGSGKYTWMKPAEEDGEDPQVHAIFEGNYKDGKKAGLGKMTYPNGDEYTGEWKDNVMEGEGTYIYKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGTITEGKWVFK 587 M ++E EYK EY D AEDAEP+V NWLPR GKA VTY +GS+FEG FN +R K G GKYTWMKP E+ E P V A +EG+Y DG K G GKMTYPNGD Y GEWKDN+ GEGTY YKA+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV+G+ITEGKW+FK Sbjct: 1 MAEQEAEYKCEYTDVAEDAEPQVHNWLPRAGKALVTYTDGSTFEGSFNDDRKKHGHGKYTWMKPPGEEDEGPVVLATYEGSYVDGAKCGTGKMTYPNGDTYWGEWKDNLHHGEGTYTYKASSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNGSITEGKWIFK 166
BLAST of mRNA_L-elsbetiae_contig499.12983.1 vs. uniprot
Match: A0A7S3UV74_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV74_HETAK) HSP 1 Score: 152 bits (385), Expect = 6.300e-43 Identity = 100/166 (60.24%), Postives = 113/166 (68.07%), Query Frame = 3 Query: 90 MGDEEVEYKAEYLDTAEDAEPEVANWLPRPGKAKVTYAEGSSFEGVFNGERIKEGSGKYTWMKPAEEDGEDPQVHAIFEGNYKDGKKAGLGKMTYPNGDEYTGEWKDNVMEGEGTYIYKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGTITEGKWVFK 587 MGDEE EYK +YLD + EP+ NWL RPGKAKVTY G +FEG F+GER+K+G G Y WM P ++ E Q A +EG YKDGKK G GKM +PNGD Y G W++N M GEGTY YK TXXXXXXXXXXXXXXXXXXXXX DGTI G W K Sbjct: 1 MGDEESEYKVQYLDAPDSEEPQEFNWLVRPGKAKVTYPGGHTFEGTFDGERMKQGYGVYVWMNPPNDEEEVTQ-RAKYEGEYKDGKKHGTGKMEFPNGDIYHGMWENNQMHGEGTYTYKKTXXXXXXXXXXXXXXXXXXXXXASDESQFRGEWKDGTIEAGTWAMK 165
BLAST of mRNA_L-elsbetiae_contig499.12983.1 vs. uniprot
Match: A0A7S2RSU2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSU2_9STRA) HSP 1 Score: 145 bits (365), Expect = 6.050e-40 Identity = 71/122 (58.20%), Postives = 86/122 (70.49%), Query Frame = 3 Query: 90 MGDEEVEYKAEYLDTAEDAEPEVA-NWLPRPGKAKVTYAEGSSFEGVFNGERIKEGSGKYTWMKPAEEDGEDPQVHAIFEGNYKDGKKAGLGKMTYPNGDEYTGEWKDNVMEGEGTYIYKAT 452 MGDEE EYK +Y+D AEDAE NW+ R GKA VTY G ++EG FN E+ K G G +TW++ EE+G + A +EGNY DGKK G+GKMT+PNGD Y GEWK+N MEGEGTY Y T Sbjct: 1 MGDEEAEYKVKYIDVAEDAEEATEFNWVSRAGKALVTYPNGCTYEGEFNSEKQKHGMGTFTWVEADEEEGF--KKVATYEGNYADGKKHGIGKMTFPNGDVYHGEWKENKMEGEGTYTYAKT 120
BLAST of mRNA_L-elsbetiae_contig499.12983.1 vs. uniprot
Match: A0A7S3ZK90_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZK90_9STRA) HSP 1 Score: 124 bits (311), Expect = 8.400e-32 Identity = 89/169 (52.66%), Postives = 103/169 (60.95%), Query Frame = 3 Query: 90 MGDEEVEYKAEYLDTAEDA--EPEVANWLPRPGKAKVTYAEGSSFEGVFNGERIKEGSGKYTWMKPAEEDGEDPQV-HAIFEGNYKDGKKAGLGKMTYPNGDEYTGEWKDNVMEGEGTYIYKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGTITEGKWVFK 587 M DEE YK EYLD AEDA E V W+ R GKA+VTY G+ +EG FN E++K G GKYTWM +EE+G + QV A +EG YKDGK+ G+G MTYPNGD Y YKA+ XXXXXXXXXXXXXXXXXX GT EG+W FK Sbjct: 1 MADEESNYKVEYLDCAEDAPEEERVFTWIARAGKARVTYNSGAVYEGEFNDEKMKHGQGKYTWMAASEEEGVEEQVVSATYEGEYKDGKRDGVGTMTYPNGDVXXXXXXXXXXXXXXXYKYKASDDXXXXXXXXXXXXXXXXXXFGKCKSKLDGTWEGGTFKEGEWQFK 169
BLAST of mRNA_L-elsbetiae_contig499.12983.1 vs. uniprot
Match: A0A7S2XWG3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWG3_9STRA) HSP 1 Score: 123 bits (308), Expect = 2.240e-31 Identity = 100/164 (60.98%), Postives = 116/164 (70.73%), Query Frame = 3 Query: 102 EVEYKAEYLDTAEDAEPEVANWLPRPGKAKVTY--AEGSSFEGVFNGERIKEGSGKYTWMKPAEEDGEDPQVHAIFEGNYKDGKKAGLGKMTYPNGDEYTGEWKDNVMEGEGTYIYKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGTITEGKWVFK 587 E EY+ EYLD + EP+V NW+ RPGKAKVTY A G +FEG F+ E++K+G G Y WM P +D E + A +EGNY+DGKK G+GKMT+PNGD Y T+ YKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G ITEG W K Sbjct: 5 EEEYRVEYLDQPDSEEPQVFNWVVRPGKAKVTYLAAGGHTFEGTFDAEKLKQGHGVYVWMNPPNDDDEVTE-RARYEGNYRDGKKHGVGKMTFPNGDIYHXXXXXXXXXXXXTFTYKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGNITEGTWALK 167
BLAST of mRNA_L-elsbetiae_contig499.12983.1 vs. uniprot
Match: A0A662XNK4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XNK4_9STRA) HSP 1 Score: 112 bits (279), Expect = 3.210e-27 Identity = 59/118 (50.00%), Postives = 77/118 (65.25%), Query Frame = 3 Query: 90 MGDEEVEYKAEYLDTAEDAEPEVANWLPRPGKAKVTYAEGSSFEGVFNGERIKEGSGKYTWMKPAEEDGEDPQVHAIFEGNYKDGKKAGLGKMTYPNGDEYTGEWKDNVMEGEGTYIY 443 MGD+ EY Y+D PE A +L R G+ K+TYA G +FEG +R+K G GKYTW + +E DGE V A +EG Y +G K+GLGKMT+PNGD Y GEWK + M G+G+ +Y Sbjct: 1 MGDD-AEYSVVYVDDR----PEEAKFLRREGEVKITYANGDTFEGTIGTDRLKHGEGKYTWNQRSE-DGE-VAVLATYEGTYVNGSKSGLGKMTFPNGDTYHGEWKADKMMGDGSLMY 111
BLAST of mRNA_L-elsbetiae_contig499.12983.1 vs. uniprot
Match: A0A7S2D0G2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D0G2_9STRA) HSP 1 Score: 107 bits (267), Expect = 3.310e-25 Identity = 56/103 (54.37%), Postives = 68/103 (66.02%), Query Frame = 3 Query: 90 MGDEEVEYKAEYLD--TAEDAEPEVANWLPRPGKAKVTYAEGSSFEGVFNGERIKEGSGKYTWMKPAEEDGEDPQVHAIFEGNYKDGKKAGLGKMTYPNGDEY 392 MGDEE +YK Y D T E EP V W+ PGKAKV YA G S++G FN E++K G G YTWM +DGE V A + G+Y DGK+ G+GKMT+PNGD Y Sbjct: 15 MGDEESDYKISYYDKETGELGEPGV--WVSEPGKAKVEYASGDSYDGEFNDEKMKHGQGIYTWMGEENDDGE-RAVKATYTGSYADGKRCGVGKMTFPNGDVY 114
BLAST of mRNA_L-elsbetiae_contig499.12983.1 vs. uniprot
Match: W4GSP5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GSP5_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.170e-23 Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 3 Query: 90 MGDEEVEYKAEYLDTAEDAEPEVANWLPRPGKAKVTYAEGSSFEGVFNGERIKEGSGKYTWMKPAEEDGEDPQVHAIFEGNYKDGKKAGLGKMTYPNGDEYTGEWKDNVME 422 MGD EY EY D PE W+ RPG KVTYA G +FEG FN +R+K G GKYTW + ++D + + A ++G Y++GKK G+GKM +P GD Y G+W + ++ Sbjct: 1 MGDG-AEYNVEYTDD----NPEEFKWVKRPGPVKVTYANGDTFEGTFNSDRLKHGHGKYTWNEKTDDD--EVKEIAWYDGAYENGKKHGVGKMQFPTGDTYHGQWSSDAID 104
BLAST of mRNA_L-elsbetiae_contig499.12983.1 vs. uniprot
Match: A0A1V9YZ19_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZ19_9STRA) HSP 1 Score: 101 bits (251), Expect = 4.450e-23 Identity = 47/106 (44.34%), Postives = 67/106 (63.21%), Query Frame = 3 Query: 105 VEYKAEYLDTAEDAEPEVANWLPRPGKAKVTYAEGSSFEGVFNGERIKEGSGKYTWMKPAEEDGEDPQVHAIFEGNYKDGKKAGLGKMTYPNGDEYTGEWKDNVME 422 EY EY +D PE A WL RPGK K+TYA G +FEG N R+K G G+YTW + +++ + A ++G+Y DG+K G+GKM +PNGD Y G+W + ++ Sbjct: 5 AEYTVEY----QDENPEEAKWLSRPGKVKITYANGDTFEGTVNESRLKHGVGRYTWTERVDDE---VKEIAWYKGDYVDGRKHGIGKMQFPNGDVYHGQWAKDTID 103 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig499.12983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig499.12983.1 >prot_L-elsbetiae_contig499.12983.1 ID=prot_L-elsbetiae_contig499.12983.1|Name=mRNA_L-elsbetiae_contig499.12983.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=172bp MGDEEVEYKAEYLDTAEDAEPEVANWLPRPGKAKVTYAEGSSFEGVFNGEback to top mRNA from alignment at L-elsbetiae_contig499:34988..38354+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig499.12983.1 ID=mRNA_L-elsbetiae_contig499.12983.1|Name=mRNA_L-elsbetiae_contig499.12983.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3367bp|location=Sequence derived from alignment at L-elsbetiae_contig499:34988..38354+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig499:34988..38354+ >mRNA_L-elsbetiae_contig499.12983.1 ID=mRNA_L-elsbetiae_contig499.12983.1|Name=mRNA_L-elsbetiae_contig499.12983.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1032bp|location=Sequence derived from alignment at L-elsbetiae_contig499:34988..38354+ (Laminarionema elsbetiae ELsaHSoW15)back to top |