mRNA_L-elsbetiae_contig4973.12956.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig4973.12956.1
Unique NamemRNA_L-elsbetiae_contig4973.12956.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig4973.12956.1 vs. uniprot
Match: D8LPK1_ECTSI (EsV-1-182, RFC small subunit n=2 Tax=root TaxID=1 RepID=D8LPK1_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 1.100e-141
Identity = 221/330 (66.97%), Postives = 253/330 (76.67%), Query Frame = 1
Query:   25 QPWVEKYRPRCVDDIVDHDELKQVLRGSQRTGHLPHLLFYGPPGTGKTSTILALARALVGDRNVRDRVLELNASDERGLSVVCDKIKTFSKVSVSN-SGSCYPLKLVILDEADTMTADAQSALRRTMETHAAVTRFCLVCNYPSKIIAPLSSRCAKFRFSAVDPALMKRRLLYICERECVVFEQCSGRVLGAIVESSRGDMRKAVNLLQTVSQQLPRATPSEIAEVAGEVPAAVVGELWSAVVGGSIGSASVSFQATKDAVVKFVAEGYAVGKIFPEIQRRVVLQSTGTPKKLSDRDRARVCLRLLRADRRLNDGADEELQLLDVCCLLQ 1011
            QPWVEKYRPR V D+V HD LK+VL+G+++TG LPHLLF+GPPGTGKTSTILALAR L+G+ N+R+RVLELNASDERGL VV DKIKTF K+S+S+    C P KLVILDEADTMTADAQSALRRTMET A VTRFCLVCNY SKIIAPL+SRCAKFRFS + P  MK RLLYICERE ++FE CS  VL AIV+SSRGDMR AVNLLQTVSQQ  R TP  + EVAGEVP      LWSAV   +  S    F+   DAV  FV EGY VGK+  EIQ RVV        +L + D+A +CL L+  DR LNDGADEELQLL++C ++Q
Sbjct:    2 QPWVEKYRPRRVKDVVHHDHLKRVLKGAEKTGDLPHLLFHGPPGTGKTSTILALARTLLGEENMRERVLELNASDERGLDVVRDKIKTFCKMSISSFQPGCPPFKLVILDEADTMTADAQSALRRTMETQAVVTRFCLVCNYVSKIIAPLASRCAKFRFSTLTPESMKGRLLYICERENIIFENCSRGVLDAIVKSSRGDMRSAVNLLQTVSQQQHRVTPESVVEVAGEVPERAFDTLWSAV---TSPSHLEHFEDVVDAVSTFVGEGYPVGKVLSEIQSRVVQSG-----ELENADKAVICLELMETDRCLNDGADEELQLLNICLVVQ 323          
BLAST of mRNA_L-elsbetiae_contig4973.12956.1 vs. uniprot
Match: A0A6H5JEB4_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEB4_9PHAE)

HSP 1 Score: 308 bits (789), Expect = 4.840e-100
Identity = 173/337 (51.34%), Postives = 222/337 (65.88%), Query Frame = 1
Query:   25 QPWVEKYRPRCVDDIVDHDELKQVLRGSQRTGHLPHLLFYGPPGTGKTSTILALARALVGDRNVRDRVLELNASDERGLSVVCDKIKTFSKVSVSNSGS-----CYPLKLVILDEADTMTADAQSALRRTMETHAAVTRFCLVCNYPSKIIAPLSSRCAKFRFSAVDPALMKRRLLYICERECVVFEQCSGRVLGAIVESSRGDMRKAVNLLQTVSQQLPRA--TPSEIAEVAGEVPAAVVGELWSAVVGGSIGSASVSFQATKDAVVKFVAEGYAVGKIFPEIQRRVVLQSTGTPKKLSDRDRARVCLRLLRADRRLNDGADEELQLLDVCCLLQR 1014
            QPWVEKYRP+ VDD+   DE+   L+G+  TG LPHLLFYGPPGTGKTST+LALAR L G    RDR+LELNASDERG+ VV +KIKTF++V+V  +       C P K++ILDEADTMT DAQSALRRTMET++ VTRFCL+CNY ++II PL+SRCAKFRFSA+    M  RL YI   E V   + +   L AIV+ S GDMRKAV  +Q+ SQ    A  TP  + ++AG++PA V   LWSA+  GS       +     AV  F++ GY +  +  ++Q   V  +T     + D ++A +C R+  ADR L DG +EELQLLD+  +  R
Sbjct:   28 QPWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVREKIKTFAQVAVGRATHQAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGAMLDRLSYISREEDV---KITADGLQAIVDLSGGDMRKAVTAMQSASQFYAGAEVTPEVLVDIAGKIPAEVKDALWSAIKSGS-------YHKIVAAVDDFMSSGYPLSTLLEDMQEATVADTT-----IPDHNKADICRRIAEADRCLIDGCNEELQLLDLASVAAR 349          
BLAST of mRNA_L-elsbetiae_contig4973.12956.1 vs. uniprot
Match: A0A6G0WQ06_9STRA (AAA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WQ06_9STRA)

HSP 1 Score: 281 bits (720), Expect = 5.370e-90
Identity = 157/333 (47.15%), Postives = 210/333 (63.06%), Query Frame = 1
Query:   28 PWVEKYRPRCVDDIVDHDELKQVLRGSQRTGHLPHLLFYGPPGTGKTSTILALARALVGDR-NVRDRVLELNASDERGLSVVCDKIKTFSKVSVSNSGSCYPLKLVILDEADTMTADAQSALRRTMETHAAVTRFCLVCNYPSKIIAPLSSRCAKFRFSAVDPALMKRRLLYICERECVVFEQCSGRVLGAIVESSRGDMRKAVNLLQTVSQ-QLPRATPSEIAEVAGEVPAAVVGELWSAVVGGSIGSASVSFQATKDAVVKFVAEGYAVGKIFPEIQRRVVLQSTGTPKKLSDRDRARVCLRLLRADRRLNDGADEELQLLDVCCLLQRVY 1020
            PWVEKYRP+ V DI   DE+   LR S   G LPHLLFYGPPGTGKTSTI+A+AR L G +     R LELNASD+RG+SV+ +K+K+F++ ++S S +  P K+++LDEAD+MT DAQSALRR ME ++ VTRFCL+CNY S+II P++SRCAKFR+  ++   M  R+ Y+CE+E V     S      ++E S GD+RKA+N LQ+ +Q    + T  +I  +AG  P A+  +LW       I  A  SF   KD V   +  GY V  I  ++   VV   +  P K     +A+VCL +  AD++L DGA E +QLLDV   L R Y
Sbjct:    8 PWVEKYRPKSVSDISHQDEVVSALRTSIANGQLPHLLFYGPPGTGKTSTIIAVARELFGPKFRENGRFLELNASDDRGISVIREKVKSFAQGAISGSSNMPPFKIIVLDEADSMTNDAQSALRRMMENYSKVTRFCLICNYVSRIIEPVASRCAKFRYQPLEQVSMTARIQYVCEQENV---SISNEATTTLLEVSGGDLRKAINYLQSANQLNGDQITEDDILAIAGVAPKALFDKLW-------IHVAKNSFDQLKDEVEDILYAGYPVLTILHQLADEVVANKSMDPLK-----KAKVCLCIAEADKKLGDGASEYMQLLDVAAFLMRTY 325          
BLAST of mRNA_L-elsbetiae_contig4973.12956.1 vs. uniprot
Match: A0A388K568_CHABU (AAA domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K568_CHABU)

HSP 1 Score: 280 bits (717), Expect = 2.090e-89
Identity = 157/340 (46.18%), Postives = 213/340 (62.65%), Query Frame = 1
Query:   19 SRQPWVEKYRPRCVDDIVDHDELKQVLRGSQRTGHLPHLLFYGPPGTGKTSTILALARALVGDRNVRDRVLELNASDERGLSVVCDKIKTFSKVSVSNSGS---CYPLKLVILDEADTMTADAQSALRRTMETHAAVTRFCLVCNYPSKIIAPLSSRCAKFRFSAVDPALMKRRLLYICERECVVFEQCSGRVLGAIVESSRGDMRKAVNLLQTVSQQLPRAT-PSEIAEVAGEVPAAVVGELWSAVVGGSIGSASVSFQATKDAVVKFVAEGYAVGKIFPEIQRRVVLQSTGTPKKLSDRDRARVCLRLLRADRRLNDGADEELQLLDVCCLLQRVYLN 1026
            S QPWVEKYRP+ V ++   +E+ + L+ +  TG+LPHLLFYGPPGTGKTST LA+AR L G   ++ RVLELNASD+RG++VV  KIK F+ ++V        C P KL+ILDEAD+MT DAQ+ALRRTMET+  VTRFC +CNY S+II PL+SRCAKFRF  +   +M +R+ YIC++E +  +      +  +   + GDMR+A+  LQ+ S++        +I  V+G VP  VV +L +    G        F   + AV    AEGY V +I  ++Q R V+        ++D  +AR+CLR+  AD+ L DGADE LQLLDV     R   N
Sbjct:    5 SSQPWVEKYRPKSVSEVAYQEEVVRTLKNTLETGNLPHLLFYGPPGTGKTSTALAIARQLFGPELIKSRVLELNASDDRGINVVRTKIKDFAAIAVGAGVPGYPCPPFKLLILDEADSMTEDAQNALRRTMETYTKVTRFCFICNYISRIIEPLASRCAKFRFKPLVSDIMVKRISYICDQEGLTLQP---EAMDTLCRIADGDMRRAITSLQSASRRYGHCLMKKDILNVSGVVPDEVVADLLTTCKSGV-------FDRAQAAVTNVAAEGYPVSQILAQMQDRAVVAQD-----MTDEQKARICLRIAEADKCLIDGADEFLQLLDVASCTMRALCN 329          
BLAST of mRNA_L-elsbetiae_contig4973.12956.1 vs. uniprot
Match: A0A1Y1HK96_KLENI (Replication factor C subunit RFC4 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HK96_KLENI)

HSP 1 Score: 279 bits (714), Expect = 6.530e-89
Identity = 162/340 (47.65%), Postives = 212/340 (62.35%), Query Frame = 1
Query:   19 SRQPWVEKYRPRCVDDIVDHDELKQVLRGSQRTGHLPHLLFYGPPGTGKTSTILALARALVGDRNVRDRVLELNASDERGLSVVCDKIKTFSKVSVSNSGS---CYPLKLVILDEADTMTADAQSALRRTMETHAAVTRFCLVCNYPSKIIAPLSSRCAKFRFSAVDPALMKRRLLYICERECVVFEQCSGRVLGAIVESSRGDMRKAVNLLQTVSQQLPRATPSE-IAEVAGEVPAAVVGELWSAVVGGSIGSASVSFQATKDAVVKFVAEGYAVGKIFPEIQRRVVLQSTGTPKKLSDRDRARVCLRLLRADRRLNDGADEELQLLDVCCLLQRVYLN 1026
            S QPWVEKYRPR V+D+   +E+ + LR S  TG+LPHLLFYGPPGTGKT+T LA+AR L G   V+ RVLELNASD+RG++VV  KIK F+ V+V    S   C P K++ILDEAD+MT DAQ+ALRRTMET++ VTRFC +CNY S+II PL+SRCAKFRF  +   +M  R+ YIC  E +  +  +   LG +   S GDMR+A+  LQ+ S+       SE I  V+G VP  V+ +L ++   G        +   +  V   +A+GYAV +I  ++   VV     T     D  +AR+C R+  AD+ L DG DE LQLLDV     R   N
Sbjct:    8 STQPWVEKYRPRNVNDVASQEEVVKTLRNSLETGNLPHLLFYGPPGTGKTTTALAIARQLFGPELVKTRVLELNASDDRGINVVRTKIKDFAAVAVGPGVSGYPCPPFKVLILDEADSMTEDAQNALRRTMETYSKVTRFCFICNYISRIIEPLASRCAKFRFKPLGREIMTDRIQYICREEGLSLDDEALNTLGKV---SGGDMRRAITCLQSASRLFGSRISSENIISVSGVVPDDVIEKLLTSCRSGD-------YDKAQGTVTDIIADGYAVSQILSQLHDEVVRAEDVT-----DEQKARICERVAEADKCLIDGGDEYLQLLDVASNTMRALCN 332          
BLAST of mRNA_L-elsbetiae_contig4973.12956.1 vs. uniprot
Match: A0A5C3EQA8_9BASI (Probable RFC2 - DNA replication factor C, 41 KD subunit n=1 Tax=Pseudozyma flocculosa TaxID=84751 RepID=A0A5C3EQA8_9BASI)

HSP 1 Score: 281 bits (718), Expect = 6.790e-89
Identity = 161/374 (43.05%), Postives = 232/374 (62.03%), Query Frame = 1
Query:    1 MADKSCSRQPWVEKYRPRCVDDIVDHDELKQVLRGSQRTGHLPHLLFYGPPGTGKTSTILALARALVGDRNVRDRVLELNASDERGLSVVCDKIKTFSKVSVSNSG---SCYPLKLVILDEADTMTADAQSALRRTMETHAAVTRFCLVCNYPSKIIAPLSSRCAKFRFSAVDPALMKRRLLYICERECVVFEQCSGRVLGAIVESSRGDMRKAVNLLQTVSQ-------QLPRATPSEIAEVAGEVPAAVVG-------------------ELWSAVVGGSIGSASVSFQATKDAVVKFVAEGYAVGKIFPEIQRRVVLQSTGTPKKLSDRDRARVCLRLLRADRRLNDGADEELQLLDVCCLLQRVYLNNSK 1035
            +A++  + +PWVEKYRP+ +D++   +    VL+ +  + +LPH+LFYGPPGTGKTSTILALAR L G   ++ RVLELNASDERG+SVV +KIK F+K++V+N      C P K++ILDEAD+MT DAQSALRR ME ++ +TRFCLVCNY ++II PL+SRC+KFRF ++     K RL  I + E V FE+    VL  ++ +S GD+R+A+  LQ+ S+       +     P  I E+AG VP AV+                    E+ S    G  GS+S SFQ  +DAV     EG+++ ++  ++   ++  +T     L+ R +A+  L++   D+ L DGADEELQLL++C  +Q V   + K
Sbjct:   20 IAEQRAAMRPWVEKYRPKTIDEVASQEHTVAVLQKTLMSSNLPHMLFYGPPGTGKTSTILALARQLFGPELIKTRVLELNASDERGISVVREKIKNFAKLAVTNPKIDYPCPPFKIIILDEADSMTQDAQSALRRIMEQYSKITRFCLVCNYVTRIIEPLASRCSKFRFRSLATESTKTRLESIAKAEGVEFEE---GVLDTLITTSDGDLRRAITYLQSASRLHSIEGTERTAIAPDSIVEIAGVVPQAVIMGLCTAMGIEPAETDADGDVEMTSVQKKGGRGSSSSSFQVIRDAVRSIAREGFSITQLLIQLHDAIIGHAT-----LNARIKAKSALQMAEMDKSLIDGADEELQLLNLCLKIQAVVATDGK 385          
BLAST of mRNA_L-elsbetiae_contig4973.12956.1 vs. uniprot
Match: K3W771_GLOUD (AAA domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W771_GLOUD)

HSP 1 Score: 278 bits (710), Expect = 2.460e-88
Identity = 155/334 (46.41%), Postives = 214/334 (64.07%), Query Frame = 1
Query:   28 PWVEKYRPRCVDDIVDHDELKQVLRGSQRTGHLPHLLFYGPPGTGKTSTILALARALVG-DRNVRDRVLELNASDERGLSVVCDKIKTFSKVSVSNSGSCYPLKLVILDEADTMTADAQSALRRTMETHAAVTRFCLVCNYPSKIIAPLSSRCAKFRFSAVDPALMKRRLLYICERECVVFEQCSGRVLGAIVESSRGDMRKAVNLLQTVSQQLPRATPS--EIAEVAGEVPAAVVGELWSAVVGGSIGSASVSFQATKDAVVKFVAEGYAVGKIFPEIQRRVVLQSTGTPKKLSDRDRARVCLRLLRADRRLNDGADEELQLLDVCCLLQRVY 1020
            PWVEKYRP+ VD+I   + +   L+ S  +G LPHLLFYGPPGTGKTSTI+A+AR L G D     R LELNASD+RG+SVV +K+K F++ ++S S +  P K+++LDEAD+MT DAQSALRR ME ++ VTRFCL+CNY S+II P++SRCAKFRF+ ++   M  R+ YIC+ E V   + S  V+ +++E S GD+RKA+N LQ+  Q       S  ++  VAG  P  ++   W +V       AS +F   K  +   +  GY V  +  ++   V+     T  KLSD  +A++CLR+  AD++L DGA E  QLLDV   + RVY
Sbjct:   17 PWVEKYRPKNVDEISHQEHVVATLKTSIASGQLPHLLFYGPPGTGKTSTIVAVARQLFGPDFRKNGRFLELNASDDRGISVVREKVKGFAQGAISGSSTMPPFKIIVLDEADSMTGDAQSALRRMMENYSKVTRFCLICNYVSRIIEPVASRCAKFRFAPLEKISMTARIQYICQEEHV---ESSDEVIDSLLECSNGDLRKAINFLQSAKQLCGNEPLSKDDVIAVAGLAPPELLELFWKSV-------ASNNFDKMKVEIESILMAGYPVLTVLKQLSDDVL-----TNAKLSDTKKAKLCLRIAEADKKLVDGASEHFQLLDVASYIMRVY 335          
BLAST of mRNA_L-elsbetiae_contig4973.12956.1 vs. uniprot
Match: A0A7S4DH62_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DH62_HETAK)

HSP 1 Score: 278 bits (710), Expect = 3.700e-88
Identity = 170/347 (48.99%), Postives = 204/347 (58.79%), Query Frame = 1
Query:   10 KSCSRQPWVEKYRPRCVDDIVDHDELKQVLRGSQRTGHLPHLLFYGPPGTGKTSTILALARALVGDRNVRDRVLELNASDERGLSVVCDKIKTFSKVSVS------NSGSCYPLKLVILDEADTMTADAQSALRRTMETHAAVTRFCLVCNYPSKIIAPLSSRCAKFRFSAVDPALMKRRLLYICERECVVFEQCSGRVLGAIVESSRGDMRKAVNLLQTVSQQLPRATPSE------IAEVAGEVPAAVVGELWSAVVGGSIGSASVSFQATKDAVVKFVAEGYAVGKIFPEIQRRVVLQSTGTPKKLSDRDRARVCLRLLRADRRLNDGADEELQLLDVCCLLQR 1014
            KS   QPWVEKYRP+ VDDI   DE+ + L+ +  TG LPHLLFYGPPGTGKTSTILA+A+ L G    R RVLELNASDERG+ V+ +K+K F++ +V       N   C P K+V+LDEADTMT DAQ+ALRRTME H+ VTRFCLVCNY S+II PL+SRCAKFRF  +    M  RL  I   E V F   S   +  IV  + GDMRKAV  LQT  +        +      I E+AG++PA     LW AV    +      F   ++      AEGY VG +   +Q  V L   G P    D  +A V  RL RAD  L DGA E LQLLD    L R
Sbjct:   11 KSARHQPWVEKYRPKTVDDIAHQDEVVKTLKNAIDTGVLPHLLFYGPPGTGKTSTILAVAKTLFGPEIYRARVLELNASDERGIKVIREKVKGFAQHAVGRGVVGPNGRRCPPFKIVVLDEADTMTPDAQAALRRTMEVHSKVTRFCLVCNYVSRIIEPLASRCAKFRFQPLQAPAMAARLRQIGAEEGVAF---SDETVDTIVAVAGGDMRKAVTTLQTAHRLFGGGGSGKALGRDAILELAGDLPAEATAGLWRAVAEDRV------FHRVQEEADALAAEGYPVGALLLRLQEEV-LARPGLP----DWRKAAVLERLARADAALVDGAGERLQLLDAAATLAR 343          
BLAST of mRNA_L-elsbetiae_contig4973.12956.1 vs. uniprot
Match: A0A5D6YBZ7_9STRA (AAA domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBZ7_9STRA)

HSP 1 Score: 277 bits (709), Expect = 3.710e-88
Identity = 159/344 (46.22%), Postives = 217/344 (63.08%), Query Frame = 1
Query:    4 ADKSCSRQPWVEKYRPRCVDDIVDHDELKQVLRGSQRTGHLPHLLFYGPPGTGKTSTILALARALVG-DRNVRDRVLELNASDERGLSVVCDKIKTFSKVSVSNSGS--CYPLKLVILDEADTMTADAQSALRRTMETHAAVTRFCLVCNYPSKIIAPLSSRCAKFRFSAVDPALMKRRLLYICERECVVFEQCSGRVLGAIVESSRGDMRKAVNLLQTVSQQL--PRATPSEIAEVAGEVPAAVVGELWSAVVGGSIGSASVSFQATKDAVVKFVAEGYAVGKIFPEIQRRVVLQSTGTPKKLSDRDRARVCLRLLRADRRLNDGADEELQLLDVCCLLQRVY 1020
            AD   +  PWVEKYRP+ VD+I   D +   LR +  +G LPHLLFYGPPGTGKTSTI+A+AR L G D     R LELNASD+RG+ VV +K+K+F++ ++  SGS    P K+++LDEAD+MT DAQSALRR ME ++ VTRFCL+CNY S+II P++SRCAKFRF+ ++   M  R+ +ICE E +     S  V+  ++  S GD+RKA+N LQ+  Q       +  ++  VAG  P  ++   W+AV       AS SF  TK  +   +  GY V  I  ++   V+  +     KLSD  +A+VCLR+ +AD++L DGA E  QLLDV   + RVY
Sbjct:    9 ADTPPATLPWVEKYRPKSVDEISHQDHVVATLRTAIASGQLPHLLFYGPPGTGKTSTIVAVARQLFGPDFRRNGRFLELNASDDRGIGVVREKVKSFAQGAIGGSGSGGMPPFKIIVLDEADSMTGDAQSALRRMMENYSKVTRFCLICNYVSRIIEPVASRCAKFRFAPLERGSMAARIRFICEAERIA---SSDAVIDELLACSGGDLRKAINFLQSAKQLCGDDDLSADDVIAVAGLAPPELLELFWTAV-------ASNSFDKTKLEIENILMAGYPVLTILKQLNADVLANA-----KLSDAQQAKVCLRIAQADKKLVDGASEHFQLLDVASYIMRVY 337          
BLAST of mRNA_L-elsbetiae_contig4973.12956.1 vs. uniprot
Match: A0A293M3C4_ORNER (AAA domain-containing protein (Fragment) n=3 Tax=Ornithodoros TaxID=6937 RepID=A0A293M3C4_ORNER)

HSP 1 Score: 277 bits (708), Expect = 9.800e-88
Identity = 158/330 (47.88%), Postives = 214/330 (64.85%), Query Frame = 1
Query:   28 PWVEKYRPRCVDDIVDHDELKQVLRGSQRTGHLPHLLFYGPPGTGKTSTILALARALVGDRNVRDRVLELNASDERGLSVVCDKIKTFSKVSVS----NSGSCYPLKLVILDEADTMTADAQSALRRTMETHAAVTRFCLVCNYPSKIIAPLSSRCAKFRFSAVDPALMKRRLLYICERECVVFEQCSGRVLGAIVESSRGDMRKAVNLLQTVSQQL--PRATPSEIAEVAGEVPAAVVGELWSAVVGGSIGSASVSFQATKDAVVKFVAEGYAVGKIFPEIQRRVVLQSTGTPKKLSDRDRARVCLRLLRADRRLNDGADEELQLLDVC 999
            PWVEKYRP+ VDD+   DE+  VL+ S +   LP+LLFYGPPGTGKTSTILALAR L GD   + R+LELNASDERG+ VV +KIK FS++S S    +   C P K+VILDEAD+MT+ AQ+ALRRTME     TRFCL+CNY S+II PL+SRC+KFRF  V   ++ +RL  ICE E V    C   VLG ++++  GDMR+AVNLLQ+VS        T  +++EVA  VP   +  +           +S S++  +  V  FV EG+A  ++F ++   +V     T ++ +D+ ++ +C +L   D RL DGADE LQ++D+C
Sbjct:   35 PWVEKYRPKTVDDVAHQDEVVSVLKKSLQGADLPNLLFYGPPGTGKTSTILALARELFGDM-YKSRILELNASDERGIQVVREKIKNFSQLSASGVRPDGTPCPPYKIVILDEADSMTSSAQAALRRTMEKQTKTTRFCLICNYVSRIIEPLTSRCSKFRFKPVPKDVLLKRLRLICEAENV---DCEDGVLGFLMDACEGDMRRAVNLLQSVSMFKIGEPLTSDDVSEVANVVPKPWIDRVLQV-------CSSNSYEKLQAVVEDFVLEGFAASQLFSQMHDVIV-----TSEEYTDKQKSVICEKLAICDHRLLDGADEYLQIMDLC 348          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4973.12956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPK1_ECTSI1.100e-14166.97EsV-1-182, RFC small subunit n=2 Tax=root TaxID=1 ... [more]
A0A6H5JEB4_9PHAE4.840e-10051.34AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6G0WQ06_9STRA5.370e-9047.15AAA domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A388K568_CHABU2.090e-8946.18AAA domain-containing protein n=1 Tax=Chara brauni... [more]
A0A1Y1HK96_KLENI6.530e-8947.65Replication factor C subunit RFC4 n=1 Tax=Klebsorm... [more]
A0A5C3EQA8_9BASI6.790e-8943.05Probable RFC2 - DNA replication factor C, 41 KD su... [more]
K3W771_GLOUD2.460e-8846.41AAA domain-containing protein n=1 Tax=Globisporang... [more]
A0A7S4DH62_HETAK3.700e-8848.99Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5D6YBZ7_9STRA3.710e-8846.22AAA domain-containing protein n=1 Tax=Pythium bras... [more]
A0A293M3C4_ORNER9.800e-8847.88AAA domain-containing protein (Fragment) n=3 Tax=O... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4973contigL-elsbetiae_contig4973:3784..4821 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeViruses
Seed ortholog score416.8
Seed ortholog evalue1e-113
Seed eggNOG ortholog654926.Q8QNA5_ESV1K
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0016032,GO:0019058,GO:0019079,GO:0039686,GO:0039693,GO:0044403,GO:0044419,GO:0051704
EggNOG free text desc.ATPase activity
EggNOG OGs4QAR1@10239,4QUNA@35237
COG Functional cat.S
Best tax leveldsDNA viruses, no RNA stage
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionEsV-1-182 replication factor C small subunit
Ec32 orthologEc-06_005100.1
Exons1
Model size1038
Cds size1038
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816497.8789215-CDS-L-elsbetiae_contig4973:3783..48211622816497.8789215-CDS-L-elsbetiae_contig4973:3783..4821Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4973 3784..4821 -
1691683602.8752346-CDS-L-elsbetiae_contig4973:3783..48211691683602.8752346-CDS-L-elsbetiae_contig4973:3783..4821Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4973 3784..4821 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4973.12956.1prot_L-elsbetiae_contig4973.12956.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig4973 3784..4821 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig4973.12956.1

>prot_L-elsbetiae_contig4973.12956.1 ID=prot_L-elsbetiae_contig4973.12956.1|Name=mRNA_L-elsbetiae_contig4973.12956.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=346bp
MADKSCSRQPWVEKYRPRCVDDIVDHDELKQVLRGSQRTGHLPHLLFYGP
PGTGKTSTILALARALVGDRNVRDRVLELNASDERGLSVVCDKIKTFSKV
SVSNSGSCYPLKLVILDEADTMTADAQSALRRTMETHAAVTRFCLVCNYP
SKIIAPLSSRCAKFRFSAVDPALMKRRLLYICERECVVFEQCSGRVLGAI
VESSRGDMRKAVNLLQTVSQQLPRATPSEIAEVAGEVPAAVVGELWSAVV
GGSIGSASVSFQATKDAVVKFVAEGYAVGKIFPEIQRRVVLQSTGTPKKL
SDRDRARVCLRLLRADRRLNDGADEELQLLDVCCLLQRVYLNNSK*
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mRNA from alignment at L-elsbetiae_contig4973:3784..4821-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig4973.12956.1 ID=mRNA_L-elsbetiae_contig4973.12956.1|Name=mRNA_L-elsbetiae_contig4973.12956.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1038bp|location=Sequence derived from alignment at L-elsbetiae_contig4973:3784..4821- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGGACAAGAGTTGTTCTCGCCAGCCTTGGGTCGAGAAGTATCGCCC TCGGTGCGTCGACGACATAGTCGACCACGATGAATTAAAGCAGGTCTTGC GTGGATCTCAGAGGACGGGTCACCTCCCTCACCTGTTGTTCTACGGTCCC CCGGGCACCGGCAAGACTTCAACGATCCTGGCCCTGGCGCGCGCGTTGGT GGGCGATCGCAACGTTCGCGACCGCGTGCTGGAGCTGAACGCTTCCGACG AGCGCGGTCTGAGCGTTGTTTGCGACAAAATAAAGACTTTTTCGAAGGTG TCTGTGTCTAACAGCGGTAGCTGCTACCCTCTGAAGCTTGTGATTCTAGA CGAGGCTGATACGATGACGGCTGACGCCCAGTCGGCCCTTCGGCGGACGA TGGAGACGCACGCGGCCGTGACGCGTTTTTGTCTGGTGTGCAACTACCCG TCTAAAATCATAGCCCCGCTTTCTTCTCGGTGCGCCAAGTTTCGCTTCAG CGCCGTCGACCCCGCTTTGATGAAGAGACGCTTGCTGTACATTTGCGAGC GCGAGTGTGTGGTCTTCGAGCAGTGCAGCGGCCGGGTGCTGGGCGCCATT GTGGAGAGCTCGAGGGGGGACATGCGGAAGGCGGTGAATTTGCTGCAGAC TGTGTCGCAGCAACTTCCTCGCGCGACGCCTTCCGAGATCGCGGAGGTGG CGGGCGAGGTTCCCGCCGCCGTTGTGGGAGAGCTGTGGTCGGCAGTCGTC GGGGGCTCTATCGGCTCCGCCAGCGTCTCTTTCCAGGCGACGAAGGATGC CGTGGTCAAGTTTGTGGCGGAGGGTTACGCTGTCGGCAAGATTTTTCCCG AGATTCAGCGTCGAGTGGTGCTTCAATCCACCGGAACCCCCAAAAAGTTG TCGGACCGTGACCGGGCGCGCGTTTGCCTCAGGCTGCTGCGCGCCGATCG CCGCCTGAACGACGGGGCCGACGAGGAGCTTCAGTTGCTAGACGTGTGTT GCTTGCTGCAACGCGTGTATTTAAATAATTCGAAATGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig4973:3784..4821-

>mRNA_L-elsbetiae_contig4973.12956.1 ID=mRNA_L-elsbetiae_contig4973.12956.1|Name=mRNA_L-elsbetiae_contig4973.12956.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2076bp|location=Sequence derived from alignment at L-elsbetiae_contig4973:3784..4821- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGGACAAGAGTTGTTCTCGCCAGCCTTGGGTCGAGAAGTATCGCCC
TCGGTGCGTCGACGACATAGTCGACCACGATGAATTAAAGCAGGTCTTGC
GTGGATCTCAGAGGACGGGTCACCTCCCTCACCTGTTGTTCTACGGTCCC
CCGGGCACCGGCAAGACTTCAACGATCCTGGCCCTGGCGCGCGCGTTGGT
GGGCGATCGCAACGTTCGCGACCGCGTGCTGGAGCTGAACGCTTCCGACG
AGCGCGGTCTGAGCGTTGTTTGCGACAAAATAAAGACTTTTTCGAAGGTG
TCTGTGTCTAACAGCGGTAGCTGCTACCCTCTGAAGCTTGTGATTCTAGA
CGAGGCTGATACGATGACGGCTGACGCCCAGTCGGCCCTTCGGCGGACGA
TGGAGACGCACGCGGCCGTGACGCGTTTTTGTCTGGTGTGCAACTACCCG
TCTAAAATCATAGCCCCGCTTTCTTCTCGGTGCGCCAAGTTTCGCTTCAG
CGCCGTCGACCCCGCTTTGATGAAGAGACGCTTGCTGTACATTTGCGAGC
GCGAGTGTGTGGTCTTCGAGCAGTGCAGCGGCCGGGTGCTGGGCGCCATT
GTGGAGAGCTCGAGGGGGGACATGCGGAAGGCGGTGAATTTGCTGCAGAC
TGTGTCGCAGCAACTTCCTCGCGCGACGCCTTCCGAGATCGCGGAGGTGG
CGGGCGAGGTTCCCGCCGCCGTTGTGGGAGAGCTGTGGTCGGCAGTCGTC
GGGGGCTCTATCGGCTCCGCCAGCGTCTCTTTCCAGGCGACGAAGGATGC
CGTGGTCAAGTTTGTGGCGGAGGGTTACGCTGTCGGCAAGATTTTTCCCG
AGATTCAGCGTCGAGTGGTGCTTCAATCCACCGGAACCCCCAAAAAGTTG
TCGGACCGTGACCGGGCGCGCGTTTGCCTCAGGCTGCTGCGCGCCGATCG
CCGCCTGAACGACGGGGCCGACGAGGAGCTTCAGTTGCTAGACGTGTGTT
GCTTGCTGCAACGCGTGTATTTAAATAATTCGAAATGAATGGCGGACAAG
AGTTGTTCTCGCCAGCCTTGGGTCGAGAAGTATCGCCCTCGGTGCGTCGA
CGACATAGTCGACCACGATGAATTAAAGCAGGTCTTGCGTGGATCTCAGA
GGACGGGTCACCTCCCTCACCTGTTGTTCTACGGTCCCCCGGGCACCGGC
AAGACTTCAACGATCCTGGCCCTGGCGCGCGCGTTGGTGGGCGATCGCAA
CGTTCGCGACCGCGTGCTGGAGCTGAACGCTTCCGACGAGCGCGGTCTGA
GCGTTGTTTGCGACAAAATAAAGACTTTTTCGAAGGTGTCTGTGTCTAAC
AGCGGTAGCTGCTACCCTCTGAAGCTTGTGATTCTAGACGAGGCTGATAC
GATGACGGCTGACGCCCAGTCGGCCCTTCGGCGGACGATGGAGACGCACG
CGGCCGTGACGCGTTTTTGTCTGGTGTGCAACTACCCGTCTAAAATCATA
GCCCCGCTTTCTTCTCGGTGCGCCAAGTTTCGCTTCAGCGCCGTCGACCC
CGCTTTGATGAAGAGACGCTTGCTGTACATTTGCGAGCGCGAGTGTGTGG
TCTTCGAGCAGTGCAGCGGCCGGGTGCTGGGCGCCATTGTGGAGAGCTCG
AGGGGGGACATGCGGAAGGCGGTGAATTTGCTGCAGACTGTGTCGCAGCA
ACTTCCTCGCGCGACGCCTTCCGAGATCGCGGAGGTGGCGGGCGAGGTTC
CCGCCGCCGTTGTGGGAGAGCTGTGGTCGGCAGTCGTCGGGGGCTCTATC
GGCTCCGCCAGCGTCTCTTTCCAGGCGACGAAGGATGCCGTGGTCAAGTT
TGTGGCGGAGGGTTACGCTGTCGGCAAGATTTTTCCCGAGATTCAGCGTC
GAGTGGTGCTTCAATCCACCGGAACCCCCAAAAAGTTGTCGGACCGTGAC
CGGGCGCGCGTTTGCCTCAGGCTGCTGCGCGCCGATCGCCGCCTGAACGA
CGGGGCCGACGAGGAGCTTCAGTTGCTAGACGTGTGTTGCTTGCTGCAAC
GCGTGTATTTAAATAATTCGAAATGA
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