mRNA_L-elsbetiae_contig495.12918.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: D7FQY0_ECTSI (Dihydroorotase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY0_ECTSI) HSP 1 Score: 508 bits (1307), Expect = 6.670e-172 Identity = 250/273 (91.58%), Postives = 261/273 (95.60%), Query Frame = 3 Query: 1305 RGSPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQLVGEGRRPQVA 2123 + +PEEI KAKASGHVYAVKLYPAGATTNSDSGVTDLA VAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIK LV+++P LKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKIS CGCAGIFTGHAA+ELYCEVFEGEGALDR AGFSSHHGADFYGIPRNEG+LTLVKEKWTVP Y FGQTEVVPLRAGE+V WQ+VGEG+RP+ A Sbjct: 83 KSTPEEILKAKASGHVYAVKLYPAGATTNSDSGVTDLANVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKPLVQKMPNLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISPCGCAGIFTGHAALELYCEVFEGEGALDRFAGFSSHHGADFYGIPRNEGALTLVKEKWTVPGSYKFGQTEVVPLRAGEDVCWQMVGEGKRPKAA 355
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: A0A835ZAN4_9STRA (Dihydroorotase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAN4_9STRA) HSP 1 Score: 396 bits (1018), Expect = 1.750e-128 Identity = 195/269 (72.49%), Postives = 219/269 (81.41%), Query Frame = 3 Query: 1317 EEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQLVGEGRRPQVA 2123 EEI +A+ SGHV+AVKLYPAGATTNSDSGVTDLAKV P +EAMAEVGMPLL+HGEVT + VDIFDKEARF+EEV+ LV R P LKVV EHITT EA FV ++ NVAATITPQHLLYNRN IF+GG+RPHMYCLP+LKRE HRL LV AATSG+ K FLGTD+APHAR AK SACGCAGIF+GHAA+ELY EVF+ GALD F S GADFYG+PRN ++TL +E W VPA Y FG +EVVPLRAGE V WQ+ EGRRP A Sbjct: 89 EEIHQARKSGHVHAVKLYPAGATTNSDSGVTDLAKVYPVLEAMAEVGMPLLVHGEVTASHVDIFDKEARFVEEVLGPLVARFPNLKVVAEHITTKEAAEFVLSSGPNVAATITPQHLLYNRNEIFRGGVRPHMYCLPILKREEHRLALVGAATSGSAKIFLGTDSAPHARGAKESACGCAGIFSGHAALELYAEVFDAAGALDSFGAFCSQRGADFYGLPRNAATVTLAREPWRVPASYAFGASEVVPLRAGEHVAWQIADEGRRPPAA 357
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: A0A1H4AZA8_9GAMM (Dihydroorotase n=3 Tax=Thiothrix TaxID=1030 RepID=A0A1H4AZA8_9GAMM) HSP 1 Score: 367 bits (941), Expect = 3.120e-117 Identity = 178/261 (68.20%), Postives = 214/261 (81.99%), Query Frame = 3 Query: 1311 SPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQL 2093 SPE+IR+AK+SG ++AVK YPAGATT+SDSGVTD+ +VA +E M EV +PLLIHGEVT +DIFD+EA FIE ++ L+ERLP+L+VV+EHITT++A AFVTAA ANVAATIT HLLYNRNA+FQGGIRPH YCLPVLKRE+HR LV AATSGNPKFFLGTD+APH R K S+CGCAGI++ HAA+ELY EVFE GALD+L F+S HG+DFYG+PRN+ +TLVK+ WTVPA G ++PLRAGE V W L Sbjct: 81 SPEDIRQAKSSGFIHAVKYYPAGATTHSDSGVTDIRQVAAVLETMQEVDLPLLIHGEVTDTNIDIFDREAVFIERILVPLLERLPRLRVVLEHITTAQAAAFVTAASANVAATITVHHLLYNRNAMFQGGIRPHAYCLPVLKRESHRQALVAAATSGNPKFFLGTDSAPHLRHDKESSCGCAGIYSAHAALELYAEVFEQAGALDKLEAFASFHGSDFYGLPRNQEQVTLVKQPWTVPAALNAGDHALIPLRAGETVGWHL 341
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: A0A5C8BIR0_9BURK (Dihydroorotase n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A5C8BIR0_9BURK) HSP 1 Score: 366 bits (940), Expect = 5.040e-117 Identity = 175/264 (66.29%), Postives = 214/264 (81.06%), Query Frame = 3 Query: 1311 SPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQLVGE 2102 +P+++R AKASG V+A KLYPAGATTNSDSGVT L K+ PA+EAMAE+G+PLL+HGEVT A VD+FD+E RFI+E + +VER P L+VV EHITT++A FV AAPANV ATIT HLLYNRN + GGIRPH YCLP+LKR TH+ L++AATSGNPKFFLGTD+APHA+ K +ACGCAG +T +AAIELY E FE +GALD+L F+SH+GADFYG+PRN +TLV+E+WT PA FG EVVPLRA E++ W+LV E Sbjct: 83 TPDDVRGAKASGFVHAAKLYPAGATTNSDSGVTSLDKIFPALEAMAEIGLPLLVHGEVTRAEVDVFDREKRFIDEQLTRVVERFPTLRVVFEHITTADAAEFVKAAPANVGATITAHHLLYNRNHMLVGGIRPHFYCLPILKRGTHQQALLEAATSGNPKFFLGTDSAPHAKHTKEAACGCAGCYTAYAAIELYAEAFEQQGALDKLEAFASHYGADFYGLPRNTDRITLVREEWTAPASLPFGDFEVVPLRANEQLRWRLVNE 346
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: A0A4T0V417_9NEIS (Dihydroorotase n=2 Tax=Crenobacter TaxID=1654931 RepID=A0A4T0V417_9NEIS) HSP 1 Score: 363 bits (933), Expect = 5.020e-116 Identity = 181/264 (68.56%), Postives = 211/264 (79.92%), Query Frame = 3 Query: 1305 RGSPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQLV 2096 R S +EIR+AKASG V+ VKLYPAGATTNSD+GVT + K PA+EAMAEVG+PLL+HGEVT +DIFD+EA FIE+V + L+ RLP LKVV EHITT +A +V AAPANV ATIT HLL NRNA+F GG+RPH +CLPVLKRETHR LVKAATSG+PKFFLGTD+APHAR AK SACGCAG++T HAAIELY E FE GALDRL F+S +G FYG+P N ++TLV+E WTV FG TE+VPLRAGE V W+LV Sbjct: 80 RTSADEIRRAKASGFVHGVKLYPAGATTNSDAGVTSIDKAMPALEAMAEVGLPLLVHGEVTDPAIDIFDREAVFIEQVFEPLIARLPGLKVVFEHITTRQAAEYVAAAPANVGATITAHHLLMNRNALFVGGVRPHHFCLPVLKRETHREALVKAATSGSPKFFLGTDSAPHARHAKESACGCAGMYTAHAAIELYAEAFEAAGALDRLEAFASLNGPAFYGLPANADTVTLVREDWTVEPVLPFGDTELVPLRAGETVRWKLV 343
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: UPI001BB44DCC (dihydroorotase n=1 Tax=Ferrigenium kumadai TaxID=1682490 RepID=UPI001BB44DCC) HSP 1 Score: 363 bits (932), Expect = 7.320e-116 Identity = 176/263 (66.92%), Postives = 213/263 (80.99%), Query Frame = 3 Query: 1311 SPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQLVG 2099 S EEIRKAKASG V+AVKLYPAGATTNSD+GVTDL K A+E M GMPLL+HGE T A +DIFD+EA FIE V++ L++ +P L+VV EHITT +A FV +AP N+AAT+TPQHLLYNRNA+ GGIRPH YCLP+LKRETHR LVKAATSG+ KFFLGTD+APHA+ K +ACGCAG ++ H+AIELY EVFE GALD+L GF+S HGAD+YG+PRN+ ++TL KE+W VPA FG+ +VPLRAGE + W+LVG Sbjct: 82 SAEEIRKAKASGAVHAVKLYPAGATTNSDAGVTDLRKTYAALEEMQRCGMPLLVHGEATDAAIDIFDREAVFIERVMQPLLKDMPNLRVVFEHITTKDAAQFVMSAPDNIAATLTPQHLLYNRNAMLVGGIRPHFYCLPILKRETHREALVKAATSGSRKFFLGTDSAPHAQHTKENACGCAGCYSAHSAIELYAEVFEAAGALDKLEGFASFHGADYYGLPRNKETITLCKEEWQVPASVEFGEHRLVPLRAGETMKWKLVG 344
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: K3WFP8_GLOUD (Dihydroorotase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFP8_GLOUD) HSP 1 Score: 363 bits (931), Expect = 1.350e-115 Identity = 173/260 (66.54%), Postives = 211/260 (81.15%), Query Frame = 3 Query: 1317 EEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQLV 2096 +EI++A ASG V+AVKLYPAGATTNSDSGVT++ V PA++AM+EVGMPLL+HGEVT +DIFD+EA FIE V+K LV ++P+LK+VMEHITT EA FVT APAN+AATITPQHLLYNRN IFQGG+RPH YCLPVLKRE HRL L++A SG+ KFFLGTD+APH K SACGCAGI++GHAA+ELY E FE G L+ L GF+ HGADFYG+ RN+G L +E+W VPA Y F +E+VPL+AGE + W+L+ Sbjct: 93 DEIKRAHASGKVFAVKLYPAGATTNSDSGVTNIENVYPALQAMSEVGMPLLVHGEVTDPSIDIFDREATFIERVLKPLVAKMPQLKIVMEHITTEEAAKFVTQAPANIAATITPQHLLYNRNVIFQGGLRPHKYCLPVLKREKHRLALLEAVASGSKKFFLGTDSAPHIASKKESACGCAGIYSGHAALELYAEAFESIGKLELLQGFACEHGADFYGLKRNDGETILKQEEWQVPASYPFDNSELVPLKAGETMRWKLL 352
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: A0A7S2USN6_9STRA (Dihydroorotase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USN6_9STRA) HSP 1 Score: 364 bits (935), Expect = 1.700e-115 Identity = 178/263 (67.68%), Postives = 210/263 (79.85%), Query Frame = 3 Query: 1305 RGSPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQL 2093 R S EEIRKAK SG VYAVKLYPAGATTNSDSGVTD+ V PA+EAMA+VGMPLL+HGEVT VD+FD+E +IE V+K +VE+ P LKVVMEHITT+EA +V A NV ATIT HLLYNRNAIF+GGI PHM+CLP+LKRE HR L++AATSGNPKFFLGTD+APHA + KIS CGCAGIFTGHA + LY E F+ A+D+L GFSS HG DFYG+PRN +TLV+ WTVP Y+FG+ EVVPL+AG ++ W + Sbjct: 137 RTSAEEIRKAKESGLVYAVKLYPAGATTNSDSGVTDIQNVYPALEAMADVGMPLLVHGEVTDQNVDVFDREPAYIERVLKGVVEKFPALKVVMEHITTAEAAEWVQAQGPNVGATITAHHLLYNRNAIFKGGICPHMFCLPILKRERHRQALLQAATSGNPKFFLGTDSAPHAVQNKISPCGCAGIFTGHAPMSLYAEAFDSVSAMDKLEGFSSFHGPDFYGLPRNSVKITLVRNPWTVPNVYSFGKDEVVPLKAGMDLEWTV 399
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: G2IV69_PSEUL (Dihydroorotase n=4 Tax=Pseudogulbenkiania TaxID=568394 RepID=G2IV69_PSEUL) HSP 1 Score: 362 bits (929), Expect = 1.910e-115 Identity = 177/262 (67.56%), Postives = 210/262 (80.15%), Query Frame = 3 Query: 1311 SPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQLV 2096 S EE+RKAKASG V+ VKLYPAGATTNSD+GVT + K PA+EAMAE+G+PLL+HGEVT VD+FD+EA FIE V + L+ RLP+LKVV EHITT +A +V AAPANVAATIT HLL NRNA+F GGIRPH YCLPVLKRE HR LVKAATSG+ KFFLGTD+APHAR K ++CGCAG++T +AAIELY E FE ALD+L GF+S HG FYG+PRN ++TLVKE WTVPA +G E+VPLRAGE + W+L+ Sbjct: 81 SAEEVRKAKASGFVHGVKLYPAGATTNSDAGVTSIDKAMPALEAMAEIGLPLLVHGEVTDPAVDVFDREAVFIERVFQPLLARLPQLKVVFEHITTKDAAEYVAAAPANVAATITAHHLLMNRNALFVGGIRPHHYCLPVLKRELHRQALVKAATSGSAKFFLGTDSAPHARHTKENSCGCAGMYTANAAIELYAEAFEAADALDQLEGFASFHGPAFYGLPRNADTITLVKESWTVPASLPYGDQELVPLRAGESIGWKLL 342
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Match: A0A1Z4VTX1_9GAMM (Dihydroorotase n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z4VTX1_9GAMM) HSP 1 Score: 359 bits (921), Expect = 3.070e-114 Identity = 171/261 (65.52%), Postives = 206/261 (78.93%), Query Frame = 3 Query: 1311 SPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEGALDRLAGFSSHHGADFYGIPRNEGSLTLVKEKWTVPACYTFGQTEVVPLRAGEEVFWQL 2093 SPEEIR A ASGHVYAVKLYPAGATT+SD+GVTD+ P +EAMAE G+PLL+HGEVT +DIFD+EA FIE ++ LV RLP+LK+V+EHITT + + FV + NVA T+T HLLYNRNA+ GGIRPH YCLPVLKRE+HR L+ AATSG+PKFFLGTD+APH + AK SACGCAG++T HAAIE Y E FE ALD+L GF+SHHGADFYG+PRN ++TLV+E WTVP Y +V+PLRAG E+ W+L Sbjct: 81 SPEEIRTAAASGHVYAVKLYPAGATTHSDAGVTDIQHTLPTLEAMAEAGLPLLVHGEVTDPDIDIFDREAVFIERHLEPLVRRLPELKLVLEHITTRQGIEFVQGSGPNVAGTLTAHHLLYNRNAMLVGGIRPHYYCLPVLKRESHREALITAATSGSPKFFLGTDSAPHPQHAKESACGCAGLYTAHAAIEFYAEAFEQANALDKLEGFASHHGADFYGLPRNTDTITLVREPWTVPESYPLADAKVIPLRAGGEIAWRL 341 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig495.12918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig495.12918.1 >prot_L-elsbetiae_contig495.12918.1 ID=prot_L-elsbetiae_contig495.12918.1|Name=mRNA_L-elsbetiae_contig495.12918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp MEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKSLVERLPKLKVVMback to top mRNA from alignment at L-elsbetiae_contig495:9998..14768- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig495.12918.1 ID=mRNA_L-elsbetiae_contig495.12918.1|Name=mRNA_L-elsbetiae_contig495.12918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4771bp|location=Sequence derived from alignment at L-elsbetiae_contig495:9998..14768- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig495:9998..14768- >mRNA_L-elsbetiae_contig495.12918.1 ID=mRNA_L-elsbetiae_contig495.12918.1|Name=mRNA_L-elsbetiae_contig495.12918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1386bp|location=Sequence derived from alignment at L-elsbetiae_contig495:9998..14768- (Laminarionema elsbetiae ELsaHSoW15)back to top |