mRNA_L-elsbetiae_contig4945.12910.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4945.12910.1 vs. uniprot
Match: D7FMG1_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG1_ECTSI) HSP 1 Score: 372 bits (956), Expect = 3.240e-116 Identity = 241/418 (57.66%), Postives = 274/418 (65.55%), Query Frame = 1 Query: 1 RHEQTAKDMLSRLERGSAGGGRSTTAAPFGLDVRGIVRLFGALQSNGFASGVYLHPAMTNHSCRPNAIKWRAGQSIADTKPQLGRS--ANQKPVAPK-SLLSEIRATELIRKGEEITISYLEPREIALDSRRSRLKDQFGFDCNCPLCEGGSXXXXXXXXXXXXXXXXXXXXXXELSSAAALEGFVERGRGRGGVRAPGEQRAPLAGEGPVKAASEGREGTGVGVSGAPVEA----GGAGGVTGSLGDAKTGGAQGAQEXXXXXXXXXXXXXXXXXXXXXG-----RGGLVARNVLERRLEAAESIVDLSRAKEVRWSGVLSEVLGYRRQATQWLSGRHISLARADKLIAKACIAILQGSIEAAQLDAECVDSVRQASNELPVSFGGCFGGEKTPPPLEGSFKARLLAVFLSALISRK 1218 RHE+TAK M+++L R S+ A GLDV GIVRLFGALQSNGFASG+YLHPAMTNHSCR NAIKWRAGQSI+DT+ + N P K SLLSEIRATELIR G+EITISYLEPREIAL SR++RLKDQFGFDC+C LCEG + S A LE F+ +G +G E P +G E VSG P + GG GG G GDA G GA+E XXXXX RGGLVARNVLERRLEAAES+VDLSRAKEV+W GVLSEVLGYRRQA++WLSGRHISLARADKLIAKACIAILQGS EAAQ D EC ++V Q SN+LP+SFGG G E T PP +G FK RLLAVF+++LISR+ Sbjct: 187 RHEETAKVMVAKLGRESSA--TEAEAEALGLDVPGIVRLFGALQSNGFASGIYLHPAMTNHSCRANAIKWRAGQSISDTQMPHSKKKGVNPNPAGEKGSLLSEIRATELIRMGQEITISYLEPREIALASRQARLKDQFGFDCSCVLCEGHAESRQSNSEAAAAAAVD--------ESFAPLEAFLRQGLRQGRPEHQDEVAPPTC--------QKGVEVCRRNVSGEPGRSKTADGGEGGE-GIGGDAFNPGRGGAEEGEGRKWLGLEDGGHSGXXXXXXXXXXXRGGLVARNVLERRLEAAESVVDLSRAKEVKWPGVLSEVLGYRRQASRWLSGRHISLARADKLIAKACIAILQGSTEAAQSDVECAEAVLQTSNDLPMSFGGRRGLESTLPPTKGGFKTRLLAVFVASLISRR 585
BLAST of mRNA_L-elsbetiae_contig4945.12910.1 vs. uniprot
Match: A0A6H5L5K6_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K6_9PHAE) HSP 1 Score: 360 bits (925), Expect = 5.030e-111 Identity = 233/420 (55.48%), Postives = 270/420 (64.29%), Query Frame = 1 Query: 1 RHEQTAKDMLSRLERGSAGGGRSTTAAPFGLDVRGIVRLFGALQSNGFASGVYLHPAMTNHSCR---PNAIKWRAGQSIADTKPQLGRSA--NQKPVAPK-SLLSEIRATELIRKGEEITISYLEPREIALDSRRSRLKDQFGFDCNCPLCEGGSXXXXXXXXXXXXXXXXXXXXXXELSSAAALEGFVERGRGRGGVRAPGEQRAPLAGEGPVKAASEGREGTGVGVSGAPVEAGGAGGVTGS--LG-DAKTGGAQGAQEXXXXXXXXXXXXXXXXXXXXX-----GRGGLVARNVLERRLEAAESIVDLSRAKEVRWSGVLSEVLGYRRQATQWLSGRHISLARADKLIAKACIAILQGSIEAAQLDAECVDSVRQASNELPVSFGGCFGGEKTPPPLEGSFKARLLAVFLSALISRK 1218 RHE+TAK M+++L R S+ A GLDV GIVRLFGALQSNGFASG+YLHPAMTNHSCR PNAIKWRAGQSI+DT+ + R N P K SLLSEIRATELIR G+EITISYLEPREIAL SR++RLKDQFGF+C+C LCEG + A LE F+ +GR E + +A K + R T SG P A G G +G DA + G GA+E RGGLVARNVLERRLEAAES++DLSRAKEV+W+GVLSEVLGYRRQA++WLSGRHISLARADKLIAKACIAILQGS EAAQ D C +V QASN+LP+SFGG G E T PP +G FK RLLAVF+++LISR+ Sbjct: 198 RHEETAKVMVAKLRRESSA--TEAEAEAMGLDVPGIVRLFGALQSNGFASGIYLHPAMTNHSCRRQRPNAIKWRAGQSISDTQMPVSRKTGVNPDPAGEKGSLLSEIRATELIRTGQEITISYLEPREIALASRQARLKDQFGFNCSCVLCEGHADHRQSNSEATAASAAVH-------ERVAPLEAFLRQGRP--------EHQDEIAPPTCQKGGAVCRRNT----SGEPGRNKSADGRKGGEDIGEDAFSPGRGGAEEGEGREWLGPEDAGHSVGGSGEEDEEEDRGGLVARNVLERRLEAAESVLDLSRAKEVKWAGVLSEVLGYRRQASRWLSGRHISLARADKLIAKACIAILQGSTEAAQSDVGCAAAVLQASNDLPMSFGGRRGLESTLPPTKGGFKTRLLAVFVASLISRR 596
BLAST of mRNA_L-elsbetiae_contig4945.12910.1 vs. uniprot
Match: A0A6H5J9C5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C5_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 7.690e-17 Identity = 71/163 (43.56%), Postives = 91/163 (55.83%), Query Frame = 1 Query: 1657 RTHVALTINKSQGQRLTREGLDLRSNVFCHGQLYVALSRTTLCKNILCLVQPERLINGVPNVTNCVHEPFILAATGSSLPSFYQPPN--------------------------QNXXXXXXXXXXXXXXXXXXXSWHILDEVGDGACLLRIMVRRALGNPNYH 2067 RT ++TINKSQGQ L++ GLDLRS+ F HGQLYVALSR+ +I+CL+ +I+G+P N V+ P I AAT Y P N ++ XXXXXXXXXXX SW +LDE+GDGAC+LR + R G+P H Sbjct: 379 RTAYSMTINKSQGQTLSKIGLDLRSSPFAHGQLYVALSRSQNRTSIMCLLPDTHIIDGIPYTDNIVYPPLIQAATFGD----YHPGNSISGSVGGDKDTQSCDGDEESVDDADKDDXXXXXXXXXXXANADSLGSWTVLDEIGDGACMLRCVSRYIYGSPITH 537
BLAST of mRNA_L-elsbetiae_contig4945.12910.1 vs. uniprot
Match: A0A2P4X264_9STRA (Putative SET-domain transcriptional regulator protein, Zn-binding site n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X264_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 4.390e-15 Identity = 44/107 (41.12%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 124 ALQSNGFASGVYLHPAMTNHSCRPNAIKWRAGQSIADTKPQLGRSANQKPVAPKSLLSEIRATELIRKGEEITISYLEPREIALDSRRSRLKDQFGFDCNCPLCEGG 444 A+Q N F SGV+L+ AM NH C PN +K+ + P+ +SE+R I KGE++TISYL PRE + ++RR L +QFGF+C+C LC+ G Sbjct: 196 AMQCNAFDSGVFLYNAMFNHDCNPNCVKF-----------------TPEDAGPEGGVSEVRVARPIAKGEQLTISYLYPREQSRENRRKNLWEQFGFECSCELCKRG 285
BLAST of mRNA_L-elsbetiae_contig4945.12910.1 vs. uniprot
Match: A0A6G0X963_9STRA (SET domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X963_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 5.320e-15 Identity = 44/106 (41.51%), Postives = 60/106 (56.60%), Query Frame = 1 Query: 127 LQSNGFASGVYLHPAMTNHSCRPNAIKWRAGQSIADTKPQLGRSANQKPVAPKSLLSEIRATELIRKGEEITISYLEPREIALDSRRSRLKDQFGFDCNCPLCEGG 444 +Q N F+SGV+LH AM NH C PN +K+ +++ +SE+RA IRKGE++ ISYL PRE + + R+ +L QFGF C CPLC G Sbjct: 187 MQCNAFSSGVFLHTAMFNHDCNPNCVKFTPETALS--------------------VSEVRAARAIRKGEQLFISYLYPREQSRERRQKQLLRQFGFQCVCPLCSRG 272
BLAST of mRNA_L-elsbetiae_contig4945.12910.1 vs. uniprot
Match: A0A3F2RZL5_9STRA (SET domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RZL5_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 5.650e-15 Identity = 43/107 (40.19%), Postives = 61/107 (57.01%), Query Frame = 1 Query: 124 ALQSNGFASGVYLHPAMTNHSCRPNAIKWRAGQSIADTKPQLGRSANQKPVAPKSLLSEIRATELIRKGEEITISYLEPREIALDSRRSRLKDQFGFDCNCPLCEGG 444 A+Q N F SGV+L AM NH C PN +K+ + P +SE+R I+KGE++TISYL PRE + ++R+ L++QFGF+C C LC+ G Sbjct: 119 AMQCNAFDSGVFLFNAMFNHDCNPNCVKFAPEDA-----------------GPDGGVSEVRVARPIKKGEQLTISYLYPREKSRENRQKNLREQFGFECKCELCKRG 208
BLAST of mRNA_L-elsbetiae_contig4945.12910.1 vs. uniprot
Match: A0A485KVE1_9STRA (Aste57867_12068 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVE1_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 9.720e-15 Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 127 LQSNGFASGVYLHPAMTNHSCRPNAIKWRAGQSIADTKPQLGRSANQKPVAPKSLLSEIRATELIRKGEEITISYLEPREIALDSRRSRLKDQFGFDCNCPLCEGG 444 +Q N F+SGV+LH AM NH C PN +K+ +++ +SE+RA + I+KGE++ ISYL PRE + + R+ +L QFGF+C CP+C G Sbjct: 192 MQCNAFSSGVFLHTAMFNHDCNPNCVKFTPESAMS--------------------VSEVRAAKAIKKGEQLFISYLYPREQSRERRQKQLTRQFGFECVCPMCARG 277
BLAST of mRNA_L-elsbetiae_contig4945.12910.1 vs. uniprot
Match: A0A225WSW6_9STRA (SET-domain transcriptional regulator protein, Zn-binding site n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WSW6_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.380e-14 Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 124 ALQSNGFASGVYLHPAMTNHSCRPNAIKWRAGQSIADTKPQLGRSANQKPVAPKSLLSEIRATELIRKGEEITISYLEPREIALDSRRSRLKDQFGFDCNCPLCEGG 444 A+Q N F SGV+L+ AM NH C PN +K+ + P+ +SE+R I KGE++TISYL PRE + ++R+ L +QFGF+C+C LC+ G Sbjct: 194 AMQCNAFDSGVFLYNAMFNHDCNPNCVKF-----------------TPEDAGPEGGVSEVRVARPIAKGEQLTISYLYPREQSRENRQKNLWEQFGFECSCELCKRG 283
BLAST of mRNA_L-elsbetiae_contig4945.12910.1 vs. uniprot
Match: A0A1W0A991_9STRA (Homoserine dehydrogenase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A991_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.440e-14 Identity = 47/106 (44.34%), Postives = 61/106 (57.55%), Query Frame = 1 Query: 127 LQSNGFASGVYLHPAMTNHSCRPNAIKWRAGQSIADTKPQLGRSANQKPVAPKSLLSEIRATELIRKGEEITISYLEPREIALDSRRSRLKDQFGFDCNCPLCEGG 444 +Q N F+SGV+LH AM NH C PN IK+ PVA + SE+RA + I KG ++ ISYL PRE + SR+ +L+ QFGF CNC LC+ G Sbjct: 583 MQCNAFSSGVFLHTAMFNHDCNPNCIKFT-------------------PVASHGI-SEVRAAQFIPKGTQLMISYLYPREQSRSSRQLQLEKQFGFTCNCSLCQRG 668
BLAST of mRNA_L-elsbetiae_contig4945.12910.1 vs. uniprot
Match: A0A024U6G3_9STRA (SET domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6G3_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.400e-14 Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 127 LQSNGFASGVYLHPAMTNHSCRPNAIKWRAGQSIADTKPQLGRSANQKPVAPKSLLSEIRATELIRKGEEITISYLEPREIALDSRRSRLKDQFGFDCNCPLCEGG 444 +Q N F SGV+LH AM NH C PN +K+ P+ G S +SE+RA + I+KGE++ ISY+ PRE + + R+++L QFGF C+CP+C G Sbjct: 191 MQCNAFTSGVFLHTAMFNHDCNPNCVKFS---------PESGLS-----------VSEVRAAKAIKKGEQLFISYIYPREQSRERRQAQLVRQFGFVCHCPMCGRG 276 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4945.12910.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4945.12910.1 >prot_L-elsbetiae_contig4945.12910.1 ID=prot_L-elsbetiae_contig4945.12910.1|Name=mRNA_L-elsbetiae_contig4945.12910.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=419bp MLSRLERGSAGGGRSTTAAPFGLDVRGIVRLFGALQSNGFASGVYLHPAMback to top mRNA from alignment at L-elsbetiae_contig4945:5306..13404- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4945.12910.1 ID=mRNA_L-elsbetiae_contig4945.12910.1|Name=mRNA_L-elsbetiae_contig4945.12910.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8099bp|location=Sequence derived from alignment at L-elsbetiae_contig4945:5306..13404- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4945:5306..13404- >mRNA_L-elsbetiae_contig4945.12910.1 ID=mRNA_L-elsbetiae_contig4945.12910.1|Name=mRNA_L-elsbetiae_contig4945.12910.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2514bp|location=Sequence derived from alignment at L-elsbetiae_contig4945:5306..13404- (Laminarionema elsbetiae ELsaHSoW15)back to top |