Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | signal anchor |
Ec32 ortholog description | hypothetical protein |
Ec32 ortholog | Ec-25_000440.1 |
Exons | 2 |
Model size | 276 |
Cds size | 276 |
Stop | 0 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816493.288816-CDS-L-elsbetiae_contig4944:9851..9993 | 1622816493.288816-CDS-L-elsbetiae_contig4944:9851..9993 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4944 9852..9993 - |
1691683599.4278183-CDS-L-elsbetiae_contig4944:9851..9993 | 1691683599.4278183-CDS-L-elsbetiae_contig4944:9851..9993 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4944 9852..9993 - |
1622816493.3028738-CDS-L-elsbetiae_contig4944:10682..10816 | 1622816493.3028738-CDS-L-elsbetiae_contig4944:10682..10816 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4944 10683..10816 - |
1691683599.4384198-CDS-L-elsbetiae_contig4944:10682..10816 | 1691683599.4384198-CDS-L-elsbetiae_contig4944:10682..10816 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4944 10683..10816 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4944.12909.1 >prot_L-elsbetiae_contig4944.12909.1 ID=prot_L-elsbetiae_contig4944.12909.1|Name=mRNA_L-elsbetiae_contig4944.12909.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp
QGSKVLELEHPAAVRRVLSLLQWTTLDPQSIVGGCVLPKWPFFERVNGSV ALLSALLGALFASYLLAVLRGHPAKRSSSSRRGLLGGSISSQ back to topmRNA from alignment at L-elsbetiae_contig4944:9852..10816- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig4944.12909.1 ID=mRNA_L-elsbetiae_contig4944.12909.1|Name=mRNA_L-elsbetiae_contig4944.12909.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=965bp|location=Sequence derived from alignment at L-elsbetiae_contig4944:9852..10816- (Laminarionema elsbetiae ELsaHSoW15) CAGGGATCAAAGGTGCTCGAGCTGGAGCACCCCGCGGCCGTGCGGAGAGT
TCTGAGCTTGCTGCAGTGGACGACTCTGGACCCGCAGTCCATCGTCGGGG
GCTGCGTGTTGCCGAAATGGCCCTTCTTTGAACGGTGAGGGGTGTAGCAA
ACGCATCCACGGAACCCCTTTTCTACAGGCCAGGCTACATGTATAACTAG
GACAGCGGAGGGAAGGACTTTAGAAGCCGAAGTTGTCGGGTCGTTTAAAC
CCCACGACTAACTTTTATGAATAGCCGAAATCAAACCATTAGGTAGACCA
GTCAGCGGCTGACTGGTGTAATGGTTTGATTCCGGCTTACAGGACGCCGA
CAACTGGTTCAAACCACACCGCCCTGCTGCTGCTACTGACTGCTGTGCTA
TGCTAAGCGGGTGGCGCGCACTCGGTTCCAGCACCAACTAACATGACCAC
CGGTAGATGCCACCGGGGTCTCACCCACGCCAACCGCCATGGCGTTACTT
CTGCCGTGGCTTTGTTCCAGGCAGCTCTTCAAATCGTGACGATTGCAGTT
TCTTGCCTCTGTAGATATATACCAAGAGCAAAATACACGGCGAATGACTC
GCCCTGTCGTATAAAAATCTACGTTACACACATCTTGGGACGTCCTAAAG
AGCGCCACCTCCTATTTTGTAGGGGTCGGAACGGTTTCTCCCGTCTCGAA
AAGGGGTTCAGTGGATGCGTTATAAACCGGTTGTTCGACTCAAGAGACGC
AACTTATAAGCCCCCCCCCCCCCCCCCCCCGCCCTCCCTCGTTTCTGCGC
CGATGCAATAAACAACTATCCAGGGTAAACGGCAGCGTTGCGCTTCTCTC
GGCGCTCCTTGGGGCACTCTTCGCGAGCTATCTCCTCGCCGTGCTTCGCG
GCCATCCCGCCAAGCGTAGCAGCAGCAGCAGACGCGGACTTCTCGGCGGA
TCCATATCATCACAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig4944:9852..10816- >mRNA_L-elsbetiae_contig4944.12909.1 ID=mRNA_L-elsbetiae_contig4944.12909.1|Name=mRNA_L-elsbetiae_contig4944.12909.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=552bp|location=Sequence derived from alignment at L-elsbetiae_contig4944:9852..10816- (Laminarionema elsbetiae ELsaHSoW15) CAGGGATCAAAGGTGCTCGAGCTGGAGCACCCCGCGGCCGTGCGGAGAGT TCTGAGCTTGCTGCAGTGGACGACTCTGGACCCGCAGTCCATCGTCGGGG GCTGCGTGTTGCCGAAATGGCCCTTCTTTGAACGCAGGGATCAAAGGTGC TCGAGCTGGAGCACCCCGCGGCCGTGCGGAGAGTTCTGAGCTTGCTGCAG TGGACGACTCTGGACCCGCAGTCCATCGTCGGGGGCTGCGTGTTGCCGAA ATGGCCCTTCTTTGAACGGGTAAACGGCAGCGTTGCGCTTCTCTCGGCGC TCCTTGGGGCACTCTTCGCGAGCTATCTCCTCGCCGTGCTTCGCGGCCAT CCCGCCAAGCGTAGCAGCAGCAGCAGACGCGGACTTCTCGGCGGATCCAT ATCATCACAGGGTAAACGGCAGCGTTGCGCTTCTCTCGGCGCTCCTTGGG GCACTCTTCGCGAGCTATCTCCTCGCCGTGCTTCGCGGCCATCCCGCCAA GCGTAGCAGCAGCAGCAGACGCGGACTTCTCGGCGGATCCATATCATCAC AG back to top
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