mRNA_L-elsbetiae_contig4938.12898.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4938.12898.1 vs. uniprot
Match: D7FX88_ECTSI (PLCXc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX88_ECTSI) HSP 1 Score: 328 bits (841), Expect = 4.770e-109 Identity = 161/236 (68.22%), Postives = 192/236 (81.36%), Query Frame = 1 Query: 1 QSWSLRTMLDAGVRAVDIRLRYKADLSLVLEHGIIELPFAFDGDVRDVLASFLVDNPTETVVMFYQMKDLSSXXXXXXXXXTAPSAEEALRASMEAHPGLWLDGSTIPTLAEARGKVVLPTSMGRESQDEFDLGAFGAVSRKKGLIREFFLESGAAAPADGGPFRLNFFSGTGRHVHPLTVAAGLGDIFQGTNEVVFEFTGGCLGVTMFDFVGEDAVTHVVAQQGTTGPTWDEPEE 708 Q+WSLRTMLD GVRA+D+R+R K+DLSLVLEHGI+ELP+ FD DVRDVLASFL DNPTETVVMFYQM DL+ +AE+ L+ASM +P LWLDG+ +PTL EARGK VLPT MG+E Q++F+L +F AV+ KKGL+R+FFLE G PADGGPFRLN+ SGTG +V+PLTVAAGL ++QGTNEVVFEF+GG LGV MFDFVGEDAV HVVAQQGT G +WD+P+E Sbjct: 154 QAWSLRTMLDTGVRAIDVRIRRKSDLSLVLEHGIVELPYGFDVDVRDVLASFLTDNPTETVVMFYQMNDLAGEDSSGGV-----TAEDTLQASMSQYPDLWLDGAVVPTLEEARGKAVLPTDMGQEEQNDFNLSSFEAVATKKGLVRDFFLEGGGV-PADGGPFRLNYLSGTGTYVYPLTVAAGLKSVYQGTNEVVFEFSGGSLGVVMFDFVGEDAVAHVVAQQGTDGLSWDQPQE 383
BLAST of mRNA_L-elsbetiae_contig4938.12898.1 vs. uniprot
Match: UPI001F2D45DE (phosphatidylinositol-specific phospholipase C domain-containing protein n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F2D45DE) HSP 1 Score: 92.4 bits (228), Expect = 7.450e-18 Identity = 78/239 (32.64%), Postives = 109/239 (45.61%), Query Frame = 1 Query: 1 QSWSLRTMLDAGVRAVDIRLRYKADLSLVLEHGIIELPFAFDGDVRDVLASFLVDNPTETVVMFYQMKDLSSXXXXXXXXXTAPSAEEALRASMEAHPGLWLDGSTIPTLAEARGKVVLPTSMGRES----------QDEFDLGAFGAVSRKKGLIREFFLESGAAAPADGGPFRLNFFSGTGRHVHPLTVAAG---LGDIFQGTNEVVFE-FTGGCL---GVTMFDFVGEDAVTHVVA 666 QS LR+ LDAG+RA+DIR R+ D + + HG++ L FD DV FL NPTETVVM + + T EA R P LW GS +PTL E RGK+V+ + QD++ + + K +R+ + AP G +NF SG+ +PL VA G LG +G N+ + GG + GV M DF G + ++A Sbjct: 69 QSLDLRSQLDAGIRALDIRCRH-IDNAFTIHHGVVYLHVNFD-DVLRTTIQFLNANPTETVVMRVKKEHTEENVTR-----TFAQTFEAYRDQPAYSPYLWR-GSHVPTLGEVRGKIVILDDFAGGAYGIPWGAISLQDDWTVSQLADIDDKWFKVRDHLARTNTGAP---GTLFVNFLSGSSALAYPLHVAGGINILGVQTRGVNDYAIDHLVGGNVQRAGVMMMDFPGAGLIDAILA 296
BLAST of mRNA_L-elsbetiae_contig4938.12898.1 vs. uniprot
Match: L7UB27_MYXSD (1-phosphatidylinositol phosphodiesterase n=4 Tax=Myxococcus TaxID=32 RepID=L7UB27_MYXSD) HSP 1 Score: 89.7 bits (221), Expect = 6.430e-17 Identity = 79/241 (32.78%), Postives = 110/241 (45.64%), Query Frame = 1 Query: 1 QSWSLRTMLDAGVRAVDIRLRYKADLSLVLEHGIIELPFAFDGDVRDVLASFLVDNPTETVVMFYQMKDLSSXXXXXXXXXTAPSAEEALRASMEAHPGLWLDGSTIPTLAEARGKVVLPTSMGR----------ESQDEFDLGAFGAVSRKKGLIREFF--LESGAAAPADGGPFRLNFFSGTGRHVHPLTVAAG---LGDIFQGTNE-VVFEFTGGCL---GVTMFDFVGEDAVTHVVA 666 QS LRT LDAG+RAVDIR R+ D + HG++ L FD DV FL NPTETVVM + + + E R E +P LW GS +PTL E RGK+V+ G + QD++ + + K +R +SG+++ +NF SG+ +P VA G LG ++G N+ V GG GV M DF G + ++A Sbjct: 79 QSLDLRTQLDAGIRAVDIRCRHIGD-RFTIHHGVVYLHVNFD-DVLQTTIQFLQANPTETVVMRVKKEHTEEDVTR-----SFAQTFEWYRNRPEYNPYLWR-GSHVPTLGEVRGKIVVLDDFGGGTYGIPWGALDLQDDWTVSQLADIDDKWNKVRAHLDRTQSGSSSK-----LFVNFLSGSSAMAYPRHVAGGINILGIDYRGVNDYAVDHLVGGWAQRAGVMMMDFPGAGLIDAILA 306
BLAST of mRNA_L-elsbetiae_contig4938.12898.1 vs. uniprot
Match: UPI001CCE2E8E (phosphatidylinositol-specific phospholipase C n=1 Tax=Cystobacter gracilis TaxID=394092 RepID=UPI001CCE2E8E) HSP 1 Score: 84.3 bits (207), Expect = 4.200e-15 Identity = 79/248 (31.85%), Postives = 117/248 (47.18%), Query Frame = 1 Query: 1 QSWSLRTMLDAGVRAVDIRLRYKADLSLVLEHGIIELPFAFDGDVRDVLASFLVDNPTETVVMFYQMKDLSSXXXXXXXXXTAPSAEE--ALRASMEAHPGLWLDGSTIPTLAEARGKVVLPTSMGRES----------------QDEFDLGAFGAVSRKKGLIREFF--LESGAAAPADGGPFRLNFFSGTGRH--VHPLTVAAGLGDIFQGTNEVVFEFT-GGCL---GVTMFDFVGEDAVTHVVA 666 QS LRT LDAG+RA+DIR R+ D + HG + FD DV FL D+P+ETV+M ++K+ S EE A S A+ G+T+PTL + RGK+V+ + G S QDE+++ + K I F +SG+A+ +NF SG+ VHP TVA+G G +++G N+ E+ G + G+ M DF G + ++A Sbjct: 93 QSLPLRTQLDAGIRALDIRCRHIGD-RFAIHHGSVYQHANFD-DVLRTTIQFLKDHPSETVLM--KVKE------EYDAEGNTRSFEETFAWYQSQTAYKNFIWTGTTLPTLEQVRGKIVIVQAFGGGSYGVRWPSDGSNASFDVQDEWEVTWLWDIPTKWERILAQFEKTKSGSASV-----MYVNFLSGSSSTGGVHPYTVASGEGSVYRGMNDQALEYLMAGNMQRTGMVMMDFPGAGLIDAIIA 325
BLAST of mRNA_L-elsbetiae_contig4938.12898.1 vs. uniprot
Match: A0A840NKH7_9PSEU (1-phosphatidylinositol phosphodiesterase n=2 Tax=Saccharopolyspora TaxID=1835 RepID=A0A840NKH7_9PSEU) HSP 1 Score: 79.7 bits (195), Expect = 7.990e-14 Identity = 74/252 (29.37%), Postives = 115/252 (45.63%), Query Frame = 1 Query: 10 SLRTMLDAGVRAVDIRLRYKADLSLVLEHGIIELPFAFDGDVRDVLA---SFLVDNPTETVVMFYQMK---DLSSXXXXXXXXXTAPSAEEALRASMEAHPGLWLDGST--IPTLAEARGKVVLPT--------------------SMGRESQDEFDLGAFGAVSRKKGLIREFFLESGAAAPADGGPFRLNFFSGTGRHVHPLTVAAGLGDIFQGTNEVVFEFTGGC----LGVTMFDFVGEDAVTHVVAQ 669 +L LDAGVRA+DIR+R K D + HG F + + DVLA +FL +P ET++M + + D+ S TA + A + H G + ++ +PTL +ARGK+VL + + G QDE+ + G + K +R+ + E+ +A D G NF SG+ +P TV+ G G +G N+ E G GV + DF G D + V+++ Sbjct: 89 TLTAQLDAGVRAIDIRVR-KVDNQFTIHHGT----FYQNANFADVLAKADAFLAAHPGETILMRLKAECTGDIGSCTDENSDQDTATILDRY--ADEDPHGGRLQNPASDGMPTLGDARGKIVLGSLQEAQGGLVDGYGLSQFTNDNWGDYVQDEYQVPTIGDIDDKWNHVRDHWDETNSA---DSGEMFWNFTSGSSLGANPKTVSCGTGGT-RGVNDYALEHLAGNDVPRTGVVLMDFPGGDLIDEVISR 329
BLAST of mRNA_L-elsbetiae_contig4938.12898.1 vs. uniprot
Match: UPI00190A8AD6 (phosphatidylinositol-specific phospholipase C n=1 Tax=Saccharopolyspora sp. HNM0986 TaxID=2781241 RepID=UPI00190A8AD6) HSP 1 Score: 79.3 bits (194), Expect = 1.110e-13 Identity = 75/254 (29.53%), Postives = 110/254 (43.31%), Query Frame = 1 Query: 10 SLRTMLDAGVRAVDIRLRYKADLSLVLEHGIIELPFAFDGDVRDVLAS---FLVDNPTETVVMFYQMKDLSSXXXXXXXXXTAPSAEEALRASMEAHPGLWL-----DGSTIPTLAEARGKVVLPT--------------------SMGRESQDEFDLGAFGAVSRKKGLIREFFLESGAAAPADGGPFRLNFFSGTGRHVHPLTVAAGLGDIFQGTNEVVFEFTGGC----LGVTMFDFVGEDAVTHVVAQQG 675 +L LDAG+RA+DIR+R K D + HG F + DVLA FL +P ETV++ + + +AE R G +L DG+ PTL ARGK+VL + G QDE+++ G + +K +RE + ++ +A PA+ LNF SG+ P VA G +G N+ E GG GV + DF G D + V+++ G Sbjct: 89 TLTAQLDAGIRAIDIRVR-KVDNEFTVHHGT----FYQHANFADVLAKAGDFLAAHPGETVLLRLKAECTGEVGSCTDESSDLSTAEIVDRYQQNDPNGHYLYNPASDGT--PTLGAARGKIVLTALQEAQGGLVGGYGLEQFNDDNWGDYVQDEYEVPTVGDIEQKWNHVREHWDKTNSADPAE---MFLNFTSGSSLGADPKDVACGASGA-RGVNDHALEHLGGNDVPRTGVVLMDFPGSDLINEVISRNG 331
BLAST of mRNA_L-elsbetiae_contig4938.12898.1 vs. uniprot
Match: A0A1H3LWQ3_9PSEU (1-phosphatidylinositol phosphodiesterase n=3 Tax=Saccharopolyspora TaxID=1835 RepID=A0A1H3LWQ3_9PSEU) HSP 1 Score: 75.9 bits (185), Expect = 2.060e-12 Identity = 75/251 (29.88%), Postives = 107/251 (42.63%), Query Frame = 1 Query: 10 SLRTMLDAGVRAVDIRLRYKADLSLVLEHGIIELPFAFDGDVRDVL---ASFLVDNPTETVVMFYQMK---DLSSXXXXXXXXXTAPSAEEALRASMEAHPGLWLD--GSTIPTLAEARGKVVLPT--------------------SMGRESQDEFDLGAFGAVSRKKGLIREFFLESGAAAPADGGPFRLNFFSGTGRHVHPLTVAAGLGDIFQGTNEVVFEFTGGC----LGVTMFDFVGEDAVTHVVA 666 +L L +G+RA+DIR+R + D L HG PF + + DVL FL +P E V+M + + +++S TA + + + G LD G +PTL +ARGK+VL T + G QD +D+ + K +R+ G A AD G LNF SG+ P VA G F+G N+ E G GV M DF G D V ++A Sbjct: 103 TLGVQLQSGIRAIDIRVR-RYDDRFTLHHG----PFYQNANFSDVLREAGEFLAAHPGEAVLMRLKAECTGEMTSCTDENSQLDTAQILD--WYRDNDPNGGYLLDPAGGEMPTLGQARGKIVLATLQGAGGGLYEGRGLGQFNNDTWGEYVQDAYDVPTLFDIDDKWFKVRDHL---GKTAAADSGRMFLNFSSGSSPAAFPNAVACGASG-FRGVNDYALEHLNGTDLPRTGVIMMDFPGADLVNAIIA 342
BLAST of mRNA_L-elsbetiae_contig4938.12898.1 vs. uniprot
Match: A0A2T4VNY9_VITXG (1-phosphatidylinositol phosphodiesterase n=2 Tax=Vitiosangium sp. (strain GDMCC 1.1324) TaxID=2138576 RepID=A0A2T4VNY9_VITXG) HSP 1 Score: 73.2 bits (178), Expect = 2.980e-11 Identity = 71/240 (29.58%), Postives = 102/240 (42.50%), Query Frame = 1 Query: 1 QSWSLRTMLDAGVRAVDIRLRYKADLSLVLEHGIIELPFAFDGDVRDVLASFLVDNPTETVVMFYQMKDLSSXXXXXXXXXTAPSAEEALRASMEAHPGLWLDGSTIPTLAEARGKVVLPTSMGRESQDEFDLGAFGA---------------VSRKKGLIREFFLESGAAAPADGGPFRLNFFSGTGRHVHPLTVAAGLGDIFQGTNEVVFEFTGGCL---GVTMFDFVGEDAVTHVVA 666 QS LR LDAG+R +DIR R+ D + H + FD DV FL DNPTETV+M + K+ + T E R P +W G+T+PTL E RGK+V+ D+F GA+G + K L+R + + +P +NF S +G P VA G+ + + + GG + GV M DF G + ++A Sbjct: 93 QSLELRPQLDAGIRVLDIRARHIGD-RFTIHHDAYYVMANFD-DVLGTAIQFLRDNPTETVLMRVK-KEYNEESTTRSFAATF----EWYRNQAAYSPYIWR-GTTVPTLGEVRGKIVI--------LDDFAGGAYGISWDSLNKQDAWTETNTTNKWNLVRTHLEATNSGSP---NTLYVNFLSASGAGGTPKGVAGGVNE------QALHYLVGGNVVRTGVLMMDFPGAGLIDAIIA 307
BLAST of mRNA_L-elsbetiae_contig4938.12898.1 vs. uniprot
Match: UPI0009E30A81 (phosphatidylinositol-specific phospholipase C n=1 Tax=Allosalinactinospora lopnorensis TaxID=1352348 RepID=UPI0009E30A81) HSP 1 Score: 72.8 bits (177), Expect = 3.820e-11 Identity = 74/246 (30.08%), Postives = 106/246 (43.09%), Query Frame = 1 Query: 1 QSWSLRTMLDAGVRAVDIRLRYKADLSLVLEHGIIELPFAFDGDVRDVLASFLVDNPTETVVMF----YQMKD--LSSXXXXXXXXXTAPSAEEALRASMEAHPGLWLDGSTIPTLAEARGKVVLPTSMGRES--------------QDEFDLGAFGAVSRKKGLIREFFLESGAAAPADGGPFRLNFFSGTGRHVHPLTVAAGLGDIFQGTNEV----VFEFTGGCLGVTMFDFVGEDAVTHVVA 666 Q L L AG+RA+DIR R+ D+ + HG + L F +RD FL ++PTETV+M Y+ ++ S P + R + + G DG IPTL EARGK+VL + QDE+ + + K R F ++G+ D +NF SG G +P VA G+ + +G N+ +FE GV M D+ G V VVA Sbjct: 96 QDSGLPEQLGAGIRALDIRARHHRDV-FPIHHGRVYLNANFTDVLRDT-TDFLKEHPTETVLMRLKEEYRAEENTRSFAETLEWYLNDNPDTADLAREHLWSPGG---DGRRIPTLGEARGKIVLLQDFNGDGAVYGPRWGGPAMDIQDEYRVPTIFDIDDKWHKARAHFEKTGSG---DSEALSVNFLSGAGVGAYPKEVARGVLGL-RGVNDFALQYLFERNVSRTGVVMMDYPGAGLVDAVVA 332
BLAST of mRNA_L-elsbetiae_contig4938.12898.1 vs. uniprot
Match: A0A250IIL0_9DELT (1-phosphatidylinositol phosphodiesterase n=1 Tax=Melittangium boletus DSM 14713 TaxID=1294270 RepID=A0A250IIL0_9DELT) HSP 1 Score: 70.5 bits (171), Expect = 2.440e-10 Identity = 73/241 (30.29%), Postives = 97/241 (40.25%), Query Frame = 1 Query: 1 QSWSLRTMLDAGVRAVDIRLRYKADLSLVLEHGIIELPFAFDGDVRDVLASFLVDNPTETVVMFYQMKDLSSXXXXXXXXXTAPSAEEALRASMEAHPGLWLDGSTIPTLAEARGKVVLPTSMGRESQDEFDLGAFGA---------------VSRKKGLIREFFLESGAAAPADGGPFRLNFFSGTGRHVHPLTVAAGLGDIFQGTNEVVFEFTGGC----LGVTMFDFVGEDAVTHVVA 666 Q +LR LDAGVRAVDIR R+ D + HG L FD V FL DNPTETV+M + + + + E R P +W G+ +PTL EARGK+V+ D+F+ G G + K L+R + + D LNF S G P AG+ D NE + G GV M DF G + ++A Sbjct: 89 QGLNLRPQLDAGVRAVDIRARHIGD-RFTIHHGAYHLMTNFDY-VLGTTVQFLKDNPTETVLMRVKKEHTEEGNTR-----SFAATFEWYRDQAAYSPYIWR-GTHVPTLGEARGKIVI--------LDDFEGGDHGINWNSIRLQDAWEETNTTTKWNLVRNHLVTTNTG---DTNALYLNFLSAAGAGGTP----AGIAD---DVNEQALHYLMGSNVQRTGVLMMDFPGAGLIDAIIA 303 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4938.12898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4938.12898.1 >prot_L-elsbetiae_contig4938.12898.1 ID=prot_L-elsbetiae_contig4938.12898.1|Name=mRNA_L-elsbetiae_contig4938.12898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=233bp MLDAGVRAVDIRLRYKADLSLVLEHGIIELPFAFDGDVRDVLASFLVDNPback to top mRNA from alignment at L-elsbetiae_contig4938:166..1794+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4938.12898.1 ID=mRNA_L-elsbetiae_contig4938.12898.1|Name=mRNA_L-elsbetiae_contig4938.12898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1629bp|location=Sequence derived from alignment at L-elsbetiae_contig4938:166..1794+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4938:166..1794+ >mRNA_L-elsbetiae_contig4938.12898.1 ID=mRNA_L-elsbetiae_contig4938.12898.1|Name=mRNA_L-elsbetiae_contig4938.12898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1398bp|location=Sequence derived from alignment at L-elsbetiae_contig4938:166..1794+ (Laminarionema elsbetiae ELsaHSoW15)back to top |