mRNA_L-elsbetiae_contig4936.12896.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig4936.12896.1
Unique NamemRNA_L-elsbetiae_contig4936.12896.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig4936.12896.1 vs. uniprot
Match: D7G2Z7_ECTSI (ABC transmembrane transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z7_ECTSI)

HSP 1 Score: 431 bits (1108), Expect = 4.690e-146
Identity = 221/288 (76.74%), Postives = 251/288 (87.15%), Query Frame = 1 
Query:    1 QVAEVYKRTLIMYRREPVLTKARLTQTIVVALLVGLIFLQLGDTQA-MQSMMGVLFFVAINQSILGTIGVLQASDKHPCVFPNEMPVFLREHDSGAYRVGSYFFGRTLAEIPIQVIFPTIFATIIYLLVGFLLEAKPYFLFTLFIVLTSNAGISLGYVVSALAKNVDVALALGPMVLMPFVIFGGLLINLNEIPAYFVWYSVFSFVQYGYRGVSIVIWETKDVLRCPPAPAQCAFPTGQSVLDYLEFEGGDEEIWRNILILVALTVGFRVLAFFTLMYRSRPTGERAY 861
            Q  EVYKRT+IMYRREPVLTKARL QT+VVA+LVGLIFLQLG++Q  +QS MGVLFFVAINQ ILGTIGVLQ       VFPNEMPVFLREHDSGAYRV SYFFGRTLAEIPIQV+FPT+F+ IIYLL GF LEAKP+ LF ++IVLTSN+ ISLGYVVSA AK+VDVALA+GPM+LMPF+IFGGLLINL+EIP YF+WYS+FSF+QYGY+ +SIVIWE+K+ L CPP P  C FPTGQ VLDYLEFEGG+ E+W N + LVAL VGFR+LAFF L+YRSRPTGERAY
Sbjct:  304 QAVEVYKRTIIMYRREPVLTKARLGQTVVVAVLVGLIFLQLGNSQRDVQSTMGVLFFVAINQGILGTIGVLQ-------VFPNEMPVFLREHDSGAYRVSSYFFGRTLAEIPIQVVFPTVFSVIIYLLCGFPLEAKPFLLFIVYIVLTSNSAISLGYVVSAFAKSVDVALAVGPMILMPFIIFGGLLINLSEIPVYFMWYSIFSFIQYGYKAISIVIWESKESLDCPPEPEPCVFPTGQDVLDYLEFEGGNRELWLNFVYLVALMVGFRILAFFALLYRSRPTGERAY 584
[Close]
BLAST of mRNA_L-elsbetiae_contig4936.12896.1 vs. uniprot
Match: A0A836CAQ7_9STRA (ABC transmembrane transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAQ7_9STRA)

HSP 1 Score: 315 bits (808), Expect = 4.350e-100
Identity = 166/288 (57.64%), Postives = 218/288 (75.69%), Query Frame = 1 
Query:    1 QVAEVYKRTLIMYRREPVLTKARLTQTIVVALLVGLIFLQLGDTQA-MQSMMGVLFFVAINQSILGTIGVLQASDKHPCVFPNEMPVFLREHDSGAYRVGSYFFGRTLAEIPIQVIFPTIFATIIYLLVGFLLEAKPYFLFTLFIVLTSNAGISLGYVVSALAKNVDVALALGPMVLMPFVIFGGLLINLNEIPAYFVWYSVFSFVQYGYRGVSIVIWETKDVLRCPPAPAQCAFPTGQSVLDYLEFEGGDEEIWRNILILVALTVGFRVLAFFTLMYRSRPTGERAY 861
            Q+ E+YKRTL+MY+REP+LT+ RL Q +VV+++VGLIFLQLG  Q+ +Q ++GVLFF  +NQSILG IGVLQ       VFP EMP+FLREH S +YRV +YF GRTLAE+PIQ+IFP ++ TI+Y LVG    A  +F+F L+++L SNA ISLGYV+SALAK+V +ALALGP+VLMP +IF GLLIN++ IPAYF+W SVFSFVQYG+ GV I++++    L CPP    C +PTG SVLDYL F   ++  WRN+ IL AL +GFR++A+  L YR++ +    Y
Sbjct:  375 QLWELYKRTLLMYKREPILTRVRLAQAVVVSVMVGLIFLQLGTAQSDVQGLIGVLFFAILNQSILGLIGVLQ-------VFPLEMPIFLREHGSASYRVDTYFLGRTLAELPIQLIFPAVYGTILYWLVGLPAFADTFFMFLLYVILASNAAISLGYVISALAKDVSIALALGPLVLMPLIIFAGLLINVDSIPAYFLWLSVFSFVQYGFEGVCIIVFDKLPTLECPPT-GFCPYPTGASVLDYLSFHMDNK--WRNVGILCALILGFRLVAYLALEYRAKRSRSAGY 652
[Close]
BLAST of mRNA_L-elsbetiae_contig4936.12896.1 vs. uniprot
Match: A0A6H5L3Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Z3_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 2.530e-57
Identity = 83/111 (74.77%), Postives = 96/111 (86.49%), Query Frame = 1 
Query:  529 MPFVIFGGLLINLNEIPAYFVWYSVFSFVQYGYRGVSIVIWETKDVLRCPPAPAQCAFPTGQSVLDYLEFEGGDEEIWRNILILVALTVGFRVLAFFTLMYRSRPTGERAY 861
            MPF+IFGGLLINL+EIP YFVWYS+FSF+QYGY+ +SIVIWE+K+ L CPP P  C FPTGQ VLDYLEFEGG+ E+W N + LVAL VGFR+LAFF L+YRSRPTGERAY
Sbjct:    1 MPFIIFGGLLINLSEIPVYFVWYSIFSFIQYGYKAISIVIWESKETLDCPPEPEPCVFPTGQDVLDYLEFEGGNRELWLNFVYLVALMVGFRILAFFALLYRSRPTGERAY 111
[Close]
BLAST of mRNA_L-elsbetiae_contig4936.12896.1 vs. uniprot
Match: A0A0G4EMB8_VITBC (ABC transporter domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EMB8_VITBC)

HSP 1 Score: 196 bits (498), Expect = 2.370e-54
Identity = 116/282 (41.13%), Postives = 166/282 (58.87%), Query Frame = 1 
Query:    1 QVAEVYKRTLIMYRREPVLTKARLTQTIVVALLVGLIFLQLGDTQ-AMQSMMGVLFFVAINQSILGTIGVLQASDKHPCVFPNEMPVFLREHDSGAYRVGSYFFGRTLAEIPIQVIFPTIFATIIYLLVGFLLEAKPYFLFTLFIVLTSNAGISLGYVVSALAKNVDVALALGPMVLMPFVIFGGLLINLNEIPAYFVWYSVFSFVQYGYRGVSIVIWETKDVLRCPPAPAQCAFPTGQSVLDYLEFEGGDEEIW-RNILILVALTVGFRVLAFFTLMYRSR 840
            Q   +  R + M  R+PVLT ARL QT+++ LLVGLIF QLGD Q ++Q   G +FF+  NQSI+G  GVLQ       VFP E P+ +REH+SG+Y   +YF  + L+ IP Q+IFP +F +I Y ++G   +   + L  L I+LT+NA ISLGY+VS    +V VALALGP++ MP ++FGG  +N + I   +VW    SF +YG+   + V+W   +          C F  G  VL +L     D  +W R++ +L A+ VGF ++A     Y+ R
Sbjct:  393 QFMVLLNREMKMTSRDPVLTVARLGQTLILGLLVGLIFYQLGDGQRSVQDKNGGIFFIVTNQSIMGIFGVLQ-------VFPMERPIAMREHESGSYSTTAYFLCKILSNIPFQIIFPALFCSISYWMMGLNPDGVTFILSVLIIILTANAAISLGYLVSTACTSVAVALALGPLIAMPLMLFGGFFVNTDTIGPGWVWLEYLSFFKYGFSAFATVVWTFPENQAIECGGTDCRFRDGNDVLKFLAVRKDD--LWERDVPVLAAMVVGFNLIALIFFWYQGR 665
[Close]
BLAST of mRNA_L-elsbetiae_contig4936.12896.1 vs. uniprot
Match: A0A812W3M3_9DINO (W protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812W3M3_9DINO)

HSP 1 Score: 191 bits (484), Expect = 1.880e-52
Identity = 116/287 (40.42%), Postives = 173/287 (60.28%), Query Frame = 1 
Query:    1 QVAEVYKRTLIMYRREPVLTKARLTQTIVVALLVGLIFLQL-GDTQAMQSMMGVLFFVAINQSILGTIGVLQASDKHPCVFPNEMPVFLREHDSGAYRVGSYFFGRTLAEIPIQVIFPTIFATIIYLLVGFLLE--AKPYFLFTLFIVLTSNAGISLGYVVSALAKNVDVALALGPMVLMPFVIFGGLLINLNEIPAYFVWYSVFSFVQYGYRGVSIVIWETKDVLRCP----PAPAQCAFPTGQSVLDYLEFEGGDEEIWRNILILVALTVGFRVLAFFTLMYRSR 840
            Q   ++ R L    R+P+LTKARL QT+ + LL GLI+L+L  + Q +Q++ G +FFV INQS  G  GV+Q        FP E P+F+REH+SG Y V +Y+  +T A+   Q+IFP IF T+++ +VG      A  +  FT  I+L SN  ISLGY+VS    +VDVALA+GP +++PF++FGGL INL+ IP +  W    S+ +Y Y  ++ VIW  + +  CP    P   QC F +G  VL+ + F   D  +  ++++L ++   +R +AF  L  R+R
Sbjct:  372 QFTVLFSRALTNTLRDPILTKARLGQTLFLGLLAGLIYLRLENNQQIVQNVNGAMFFVLINQSFSGIFGVMQT-------FPMERPIFMREHESGCYTVSAYYLAKTCADFAFQLIFPAIFCTLVFWMVGLSDNDSAVEWLAFTGIILLASNTAISLGYLVSTAVPSVDVALAVGPAIVLPFLLFGGLFINLSSIPDWLAWLEYLSWFRYAYNLLATVIWSDRTI-DCPGNAIPGSEQCPFVSGDQVLN-IYFPERDTTV--DLVVLCSMVFIYRFIAFSALWLRTR 647
[Close]
BLAST of mRNA_L-elsbetiae_contig4936.12896.1 vs. uniprot
Match: UPI001E1E0DBA (LOW QUALITY PROTEIN: protein white-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0DBA)

HSP 1 Score: 183 bits (465), Expect = 7.060e-50
Identity = 108/285 (37.89%), Postives = 171/285 (60.00%), Query Frame = 1 
Query:    1 QVAEVYKRTLIMYRREPVLTKARLTQTIVVALLVGLIFLQLG-DTQAMQSMMGVLFFVAINQSILGTIGVLQASDKHPCVFPNEMPVFLREHDSGAYRVGSYFFGRTLAEIPIQVIFPTIFATIIYLLVGFLLEAKPYFLFTLFIVLTSNAGISLGYVVSALAKNVDVALALGPMVLMPFVIFGGLLINLNEIPAYFVWYSVFSFVQYGYRGVSIVIWETKDVLRCP---PAPAQ-CAFPTGQSVLDYLEFEGGDEEIWRNILILVALTVGFRVLAFFTLMYRSR 840
            Q A V+ R+     REP++ + RL Q +++AL++GLI+LQL  D + + ++ GVLF + IN +I   +GVL +       FP E P+FLRE+  G YRV  YF  ++LAE+P  +I P IF+   Y+L G    A+ + +FT  IV+ +N  +S GY+VSA   +V  ALA+ P +++P ++FGG  +N + IP YF+W    S+ +Y    V++  W+  D+L C     +P   C +  GQ V+ YL ++  D   W NI +L+A+ V +R++AF  L+ R+R
Sbjct:  349 QFAAVFARSWKTAIREPMVVRVRLVQAVILALMLGLIYLQLDLDQEGVMNINGVLFLILINMTITNMLGVLNS-------FPLETPIFLREYGIGLYRVDIYFICKSLAELPSFIIIPVIFSAS-YILDGLYNSAEAFLIFTAVIVIVANTSVSFGYIVSAATNSVSTALAIAPPLIVPLIMFGGFFLNSDSIPVYFIWLEYLSWFKYANELVTVNQWDNIDMLSCDGNSTSPVDSCHYHNGQQVILYLNYDKDD--FWLNIGVLLAMMVVYRLVAFIVLLVRAR 623
[Close]
BLAST of mRNA_L-elsbetiae_contig4936.12896.1 vs. uniprot
Match: A0A8K1CHX3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHX3_PYTOL)

HSP 1 Score: 184 bits (466), Expect = 9.180e-50
Identity = 104/287 (36.24%), Postives = 170/287 (59.23%), Query Frame = 1 
Query:    1 QVAEVYKRTLIMYRREPVLTKARLTQTIVVALLVGLIFLQLG-DTQAMQSMMGVLFFVAINQSILGTIGVLQASDKHPCVFPNEMPVFLREHDSGAYRVGSYFFGRTLAEIPIQVIFPTIFATIIYLLVGFLLEAKPYFLFTLFIVLTSNAGISLGYVVSALAKNVDVALALGPMVLMPFVIFGGLLINLNEIPAYFVWYSVFSFVQYGYRGVSIVIWETKDVLRCPPAPAQCAFPTGQSVLDYLEFEGGDEEIWRNILILVALTVGFRVLAFFTLMYRSRPTGERA 858
            Q+  + +R ++   R+ +  KAR+  T+ + +++GLIFLQL  D + +Q   G +FF+A+NQ       +  +++      P E+P+ +REH+ G + V +++F + L+E+P Q++FP IF    Y +VGF  +A  +F F L IVL S++   LGY+VS LAK VDVA  LG + ++PF++FGGL +N +  P YF+W    S ++YG+ G+    W + D + C    A+C F TG  VLD    + G  ++W + ++LVAL + FR+L  F L  R+    + A
Sbjct:  397 QIDVICRRNVLRLVRDVIGFKARIGSTLFITIMIGLIFLQLKRDQKGVQDFTGAIFFIAVNQ-------LFSSANPEFISVPLEIPLIMREHNGGLFNVLTWYFAKNLSELPFQLLFPAIFVLPCYFMVGFGNDAGVFFSFYLIIVLLSSSATGLGYMVSCLAKRVDVAPILGILFILPFLLFGGLFLNSDSTPDYFIWLQRISPIKYGFHGLMRAFWNSVDTIHCASG-AKCIFTTGDDVLDLNSVKRG--QMWLDCVVLVALNIAFRLLGGFFLWRRTEKRNQLA 673
[Close]
BLAST of mRNA_L-elsbetiae_contig4936.12896.1 vs. uniprot
Match: A0A0G4F326_VITBC (ABC transporter domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F326_VITBC)

HSP 1 Score: 181 bits (458), Expect = 1.050e-48
Identity = 105/274 (38.32%), Postives = 167/274 (60.95%), Query Frame = 1 
Query:   43 REPVLTKARLTQTIVVALLVGLIFLQLGDTQ-AMQSMMGVLFFVAINQSILGTIGVLQASDKHPCVFPNEMPVFLREHDSGAYRVGSYFFGRTLAEIPIQVIFPTIFATIIYLLVGFLLEAKPYFLFTLFIVLTSNAGISLGYVVSALAKNVDVALALGPMVLMPFVIFGGLLINLNEIPAYFVWYSVFSFVQYGYRGVSIVIWETKDVLRCPPAP--AQCAFPTGQSVLDYLEFEGGDEEIWRNILILVALTVGFRVLAFFTLMYRSRPTGER 855
            R+P+L +ARL Q++V+ LL GLI+ +L + Q A Q   G + F+ INQ+++G +GVLQ        FP+E P+  RE++S  YRV +YF  + +++IP Q+ FP +F TI Y + G      P+ L  +F++LT+N  +S+GY++S +  NV VALALGP+ +MPF +FGG L+++  IP  ++W    SF +YG+ GV+  IW  + ++ C P+   ++  F TG  VL+Y      D  + R+   LVA+ +G+R L    L  ++R    R
Sbjct:  367 RDPILMRARLIQSLVLGLLCGLIYFRLENNQRAAQDKTGCINFMLINQAMVGVMGVLQT-------FPSEKPIAQREYESEVYRVDAYFLAKLISDIPFQLFFPFLFTTITYWMAGLNDAFVPFVLTVIFVLLTANVAMSVGYLLSCIFDNVGVALALGPLFVMPFFLFGGFLLSIESIPIGWIWLEYLSFFRYGFSGVAGSIWPGQRLV-CEPSGQGSRFCFETGSDVLEYWGLSAAD--LPRDFAALVAMIIGYRALGMLALCMKARAAKVR 630
[Close]
BLAST of mRNA_L-elsbetiae_contig4936.12896.1 vs. uniprot
Match: A0A0P4VZS6_SCYOL (ABC2_membrane domain-containing protein n=2 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VZS6_SCYOL)

HSP 1 Score: 171 bits (434), Expect = 4.280e-48
Identity = 95/283 (33.57%), Postives = 167/283 (59.01%), Query Frame = 1 
Query:    1 QVAEVYKRTLIMYRREPVLTKARLTQTIVVALLVGLIFLQLGDTQ-AMQSMMGVLFFVAINQSILGTIGVLQASDKHPCVFPNEMPVFLREHDSGAYRVGSYFFGRTLAEIPIQVIFPTIFATIIYLLVGFLLEAKPYFLFTLFIVLTSNAGISLGYVVSALAKNVDVALALGPMVLMPFVIFGGLLINLNEIPAYFVWYSVFSFVQYGYRGVSIVIWETKDVLRCPP--APAQCAFPTGQSVLDYLEFEGGDEEIWRNILILVALTVGFRVLAFFTLMYRSR 840
            Q   V KR+++   REP++ + ++ Q I+V+LL+G+I+L    TQ  + ++ G LF +    S   T+GV+         F  E+P+FLREH +G YR   YF  + LAE+P+ +  P +F +I+Y ++G    A+ +F+    ++L +NA +S GY++S LA+N+++ALA+   +L+P ++FGGL +N++ IP YF+W    S+  YG   + I  W+    + CPP   P  CA  TG+ V++ L F   +  +  ++ +L  + +GFR + F  L+ +++
Sbjct:   30 QFKAVLKRSVLANTREPMVLRTKVFQMIIVSLLLGVIYLDQEMTQEGITNINGALFLILTQISFSNTMGVVNT-------FCTELPIFLREHFNGMYRTDVYFISKNLAELPLTIFLPLLFVSIVYYMIGLYAPAENFFICAGLLILVANAAVSFGYMISCLARNLNIALAIAAPLLIPLMLFGGLFLNVDSIPVYFIWIRYISWFNYGNEALIINQWQNVKNITCPPDQIPDMCAL-TGEDVIEDLSFNKNN--LGLDVGLLFVIIIGFRFIGFLLLLLKTK 302
[Close]
BLAST of mRNA_L-elsbetiae_contig4936.12896.1 vs. uniprot
Match: UPI000BA7E65D (protein white-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA7E65D)

HSP 1 Score: 172 bits (437), Expect = 2.510e-47
Identity = 106/280 (37.86%), Postives = 160/280 (57.14%), Query Frame = 1 
Query:    1 QVAEVYKRTLIMYRREPVLTKARLTQTIVVALLVGLIFLQLGDTQ-AMQSMMGVLFFVAINQSILGTIGVLQASDKHPCVFPNEMPVFLREHDSGAYRVGSYFFGRTLAEIPIQVIFPTIFATIIYLLVGFLLEAKPYFLFTLFIVLTSNAGISLGYVVSALAKNVDVALALGPMVLMPFVIFGGLLINLNEIPAYFVWYSVFSFVQYGYRGVSIVIWETKDVLRCPPAPAQCAFPTGQSVLDYLEFEGGDEEIWRNILILVALTVGFRVLAFFTLMYRS 837
            QV  V  R+ + + REP+LT  R  QT+ +A+L+G I+     TQ ++Q++ GVLF +  N +     GV+        VF  E+PVFLREH +G YR   YF  +T  E P+ VI P +F +I+Y +VG     K + +    ++L SN   S GY++S ++  V++AL++GP +L+P ++FGG  +N +  P YF+W    S+  YG   +SI  W   D + C      C  P G++VL  L F+  D  I+ N L LV L VGFR+LAF  L++R+
Sbjct:  154 QVRAVGWRSFLSFSREPLLTNIRFAQTVFMAVLLGAIYWNQDLTQESVQNINGVLFLLLTNMTFQNMFGVIN-------VFCEELPVFLREHWNGMYRTDVYFLCKTFTEAPLYVIAPVLFTSILYWMVGLYDNGKTFLICNGIVILISNTATSFGYLMSCISSTVEIALSIGPALLIPLMMFGGFFLNNSSTPVYFIWLKYVSWFYYGNEALSINQWRNIDHIACNQTQIGC-IPNGKAVLKQLNFDE-DNFIFDNWL-LVTLLVGFRILAFIGLLFRA 423
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4936.12896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Z7_ECTSI4.690e-14676.74ABC transmembrane transporter n=1 Tax=Ectocarpus s... [more]
A0A836CAQ7_9STRA4.350e-10057.64ABC transmembrane transporter n=1 Tax=Tribonema mi... [more]
A0A6H5L3Z3_9PHAE2.530e-5774.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4EMB8_VITBC2.370e-5441.13ABC transporter domain-containing protein n=1 Tax=... [more]
A0A812W3M3_9DINO1.880e-5240.42W protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23098... [more]
UPI001E1E0DBA7.060e-5037.89LOW QUALITY PROTEIN: protein white-like n=1 Tax=Me... [more]
A0A8K1CHX3_PYTOL9.180e-5036.24Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0G4F326_VITBC1.050e-4838.32ABC transporter domain-containing protein n=2 Tax=... [more]
A0A0P4VZS6_SCYOL4.280e-4833.57ABC2_membrane domain-containing protein n=2 Tax=Sc... [more]
UPI000BA7E65D2.510e-4737.86protein white-like n=1 Tax=Limulus polyphemus TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4936contigL-elsbetiae_contig4936:564..7881 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score434.5
Seed ortholog evalue3.9e-119
Seed eggNOG ortholog2880.D7G2Z7
Preferred namew
KEGG koko:K21396
KEGG TC3.A.1.204
Hectar predicted targeting categorysignal anchor
GOsGO:0000003,GO:0001408,GO:0001409,GO:0001504,GO:0001505,GO:0003008,GO:0003674,GO:0003824,GO:0005215,GO:0005275,GO:0005345,GO:0005346,GO:0005395,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006576,GO:0006725,GO:0006726,GO:0006727,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006836,GO:0006856,GO:0006862,GO:0006863,GO:0007610,GO:0007611,GO:0007613,GO:0007617,GO:0007618,GO:0007619,GO:0008049,GO:0008055,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0008558,GO:0009058,GO:0009308,GO:0009309,GO:0009605,GO:0009628,GO:0009629,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0015075,GO:0015205,GO:0015208,GO:0015215,GO:0015216,GO:0015399,GO:0015405,GO:0015605,GO:0015696,GO:0015711,GO:0015748,GO:0015837,GO:0015842,GO:0015851,GO:0015854,GO:0015865,GO:0015868,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0016246,GO:0016441,GO:0016458,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0018130,GO:0019098,GO:0019222,GO:0019438,GO:0019748,GO:0019953,GO:0022414,GO:0022804,GO:0022857,GO:0031047,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031410,GO:0031982,GO:0032501,GO:0032504,GO:0033060,GO:0034220,GO:0034641,GO:0035194,GO:0040011,GO:0040029,GO:0042330,GO:0042332,GO:0042401,GO:0042440,GO:0042441,GO:0042623,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043324,GO:0043473,GO:0043474,GO:0043492,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0044703,GO:0045117,GO:0046148,GO:0046152,GO:0046158,GO:0046483,GO:0048066,GO:0048069,GO:0048072,GO:0048519,GO:0048609,GO:0048770,GO:0050789,GO:0050877,GO:0050890,GO:0050896,GO:0051179,GO:0051234,GO:0051608,GO:0051615,GO:0051641,GO:0051649,GO:0051704,GO:0055085,GO:0060179,GO:0060255,GO:0065007,GO:0065008,GO:0070729,GO:0070731,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072530,GO:0090740,GO:0090741,GO:0097708,GO:0098588,GO:0098656,GO:0098657,GO:0098700,GO:0099504,GO:1901264,GO:1901360,GO:1901362,GO:1901505,GO:1901564,GO:1901566,GO:1901576,GO:1901679,GO:1903716,GO:1903790,GO:1904823,GO:1905948
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1131@1,KOG0061@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-09_004270.1
Exons8
Model size864
Cds size864
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4936.12896.1prot_L-elsbetiae_contig4936.12896.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig4936 564..7881 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816491.868596-CDS-L-elsbetiae_contig4936:563..7021622816491.868596-CDS-L-elsbetiae_contig4936:563..702Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4936 564..702 +
1691683598.2999468-CDS-L-elsbetiae_contig4936:563..7021691683598.2999468-CDS-L-elsbetiae_contig4936:563..702Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4936 564..702 +
1622816491.8852339-CDS-L-elsbetiae_contig4936:1816..19111622816491.8852339-CDS-L-elsbetiae_contig4936:1816..1911Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4936 1817..1911 +
1691683598.312619-CDS-L-elsbetiae_contig4936:1816..19111691683598.312619-CDS-L-elsbetiae_contig4936:1816..1911Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4936 1817..1911 +
1622816491.901193-CDS-L-elsbetiae_contig4936:2571..26581622816491.901193-CDS-L-elsbetiae_contig4936:2571..2658Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4936 2572..2658 +
1691683598.3258533-CDS-L-elsbetiae_contig4936:2571..26581691683598.3258533-CDS-L-elsbetiae_contig4936:2571..2658Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4936 2572..2658 +
1622816491.9139452-CDS-L-elsbetiae_contig4936:3204..33471622816491.9139452-CDS-L-elsbetiae_contig4936:3204..3347Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4936 3205..3347 +
1691683598.3408434-CDS-L-elsbetiae_contig4936:3204..33471691683598.3408434-CDS-L-elsbetiae_contig4936:3204..3347Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4936 3205..3347 +
1622816491.9290886-CDS-L-elsbetiae_contig4936:5066..51241622816491.9290886-CDS-L-elsbetiae_contig4936:5066..5124Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4936 5067..5124 +
1691683598.3502777-CDS-L-elsbetiae_contig4936:5066..51241691683598.3502777-CDS-L-elsbetiae_contig4936:5066..5124Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4936 5067..5124 +
1622816491.9416213-CDS-L-elsbetiae_contig4936:5620..57201622816491.9416213-CDS-L-elsbetiae_contig4936:5620..5720Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4936 5621..5720 +
1691683598.3594754-CDS-L-elsbetiae_contig4936:5620..57201691683598.3594754-CDS-L-elsbetiae_contig4936:5620..5720Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4936 5621..5720 +
1622816491.952232-CDS-L-elsbetiae_contig4936:7002..71601622816491.952232-CDS-L-elsbetiae_contig4936:7002..7160Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4936 7003..7160 +
1691683598.3690925-CDS-L-elsbetiae_contig4936:7002..71601691683598.3690925-CDS-L-elsbetiae_contig4936:7002..7160Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4936 7003..7160 +
1622816491.9636607-CDS-L-elsbetiae_contig4936:7797..78811622816491.9636607-CDS-L-elsbetiae_contig4936:7797..7881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4936 7798..7881 +
1691683598.3811302-CDS-L-elsbetiae_contig4936:7797..78811691683598.3811302-CDS-L-elsbetiae_contig4936:7797..7881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4936 7798..7881 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig4936.12896.1

>prot_L-elsbetiae_contig4936.12896.1 ID=prot_L-elsbetiae_contig4936.12896.1|Name=mRNA_L-elsbetiae_contig4936.12896.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=288bp
QVAEVYKRTLIMYRREPVLTKARLTQTIVVALLVGLIFLQLGDTQAMQSM
MGVLFFVAINQSILGTIGVLQASDKHPCVFPNEMPVFLREHDSGAYRVGS
YFFGRTLAEIPIQVIFPTIFATIIYLLVGFLLEAKPYFLFTLFIVLTSNA
GISLGYVVSALAKNVDVALALGPMVLMPFVIFGGLLINLNEIPAYFVWYS
VFSFVQYGYRGVSIVIWETKDVLRCPPAPAQCAFPTGQSVLDYLEFEGGD
EEIWRNILILVALTVGFRVLAFFTLMYRSRPTGERAY*
back to top

mRNA from alignment at L-elsbetiae_contig4936:564..7881+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig4936.12896.1 ID=mRNA_L-elsbetiae_contig4936.12896.1|Name=mRNA_L-elsbetiae_contig4936.12896.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7318bp|location=Sequence derived from alignment at L-elsbetiae_contig4936:564..7881+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGTGGCGGAGGTGTACAAGAGGACGCTCATCATGTACCGGAGGGAGCC
GGTGCTGACCAAGGCTCGCCTCACCCAGACGATCGTCGTCGCCCTCCTCG
TGGGCTTGATTTTTCTGCAGCTCGGGGACACGCAGGCTAGTAAATACGGG
GTAGTAGTAGTGCGGTTTTCGTCTGCTCATCAGACCGCAGCACGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGTGGAGGGA
GAGAGGGAGGTTTAGGCGGAGGGAGAACAAGGGGAGCATTGTGTCCCCTA
TTTCGGCTTGCGCGCATTTTGCCCCTCTTTCGTAAGTGCGGTATCTTTCT
GCCGTAGATGACATTAAGATACTACCCTTTCCCCCCTGGACAATTTTTCG
AAGCTCGATTACTCCGTAACGAAGAGGGTGCCAGCACCAAACGACACATT
TTGGAACAGCCCTCGAGTAGATCTTTCCCACGCCACCCCCCCTTCGGCAC
CGGCACACACTCTTCTTGCTGGGGAGGAATAATCGAGCCTTGAGAAATCT
GTCCAGGGGGGTGTGGTGGTATCTTGTGAAACCTACGGTACGTGAGGCAC
CAGCACCCTCGGAGCCACGGGTGTTGTGTATCTTGCTTGATAATCCTATT
TTGGCGTCGTTGCTGTTGTTGTTGCTGCTTATGCTGATCTGCGTGGTCGA
CCAAGGAGCAAGCATTCGTTACACGATGTTGTGACGGCCGCAGCGATAAA
CAGCTAGGAATATGTACATACACAGCCGGGAAATCTGAGGACAGATAAGA
GAGCGATCGGAACAAAAAGCGTGTTTCCCCTTATCTGTCTGCAGGTGAAA
GCGCAATATTTTGCAGCGCCTCAGTCTGCCAACTTTCCTTTCGGCGTCGG
GTTGCGACTTCTGTCGGTGCAAAACATTATCGTCGACAGATTGCCGAACT
CACGAACTCGGGTGTCAAAATATCCTCAGCGAGAGACATTCGGAGCAGCG
AAGCCATGCCTTGGGCGACGCCCATGCCAATTTGAAGTCTACGCCGACTC
CCGCACCCGTGTAATGTACCCCCCATTCAGCCTTCAGTGGTGCTGCTTGG
TTTCCCGGTCTTTTTGTGGTTTGTGGTTTTTCTTTTTTTTCGAGCCCGCC
TTCTTATTGGTTTCCTTTCTCGCTCGTAAAACCCAAGTTGTACACACACG
TTACTACTGTTGCGCGTTTCATTTGATCTGTGCCGTTGTTGCGCAGACCG
AAGTGCAGAGCATGATGGGCGTGCTTTTCTTCGTGGCTATCAACCAGAGC
ATTCTAGGAACGATCGGAGTGCTGCAGGCGAGTGACAAACACCCGTGCGT
ATGTATGTATGTATGTATGTATGTATGTATGTACCGTAGGTGACACAAGA
TACCACACCCCCTGGAAAGGTTTTCAAAGCTCGGTTGCTCCCGGCAAAAA
GAGTGCCAGTTCCGAAAGCGGGTCGCGTTGGAAATATCTAGTCGAGGGCT
GTCCGAAAATGTGCCGTTTGGTGATGGCACCCTCTTCGTTACGGAGTAGT
CGAGCTCTAAAACTCTGTCCAGGGGTTGTGGTATCTTGTGTCGCCTACGG
TGTGTACCTCTGTATGGAAAATGTTCGGGTGGAAATAAATTTCATAGTTA
TTGTTTTCTTGTGGGATCTGGGGACCGGCCACCCACAGTAAGCGACAACC
CGCCCGAGATTTCCGCTCTGAAGAACTTGGAGAGGACAGCAGGCAGCGCC
TGGGCTCTCTTTGTTCTTGTTTTTCGCATCTCTTGGTACATATTTACATA
CGGTAGATACGTCCCGCGGTGCGAACCGGGAAACAAGTGAACCACTACGG
CTGCCGCGCGCGGATACACAACACGCGCGTGTGTGTGTTGTAATTCAACA
TCAATATGCATGCCAATCTCTGCACATATGCTCACGTGGTACACACCACC
GCGCGATTGTTTTGCCCTTTTTGCGCGGCATGGCGTACGTGCGTATGTAC
AATACCAGGTCTTCCCGAACGAAATGCCCGTTTTCCTGAGGGAGCACGAT
AGCGGGGCCTACCGCGTCGGCTCCTATTTCTTTGGGCGGACGCTGGTGAG
CACGGAATGGTGGATGGATTGCCTTCTTATTTTCACGCGAGTGCGTGCGT
GCGTGCGTGCGTGCGTGTGCGTGCGTGTGCATTAGATCGGAGGGTAAATC
CTGGTTTATTTCGTTGCGTCATGGTGCACAAATCGTTTTTCCTATTGTTG
TTTGGCTCGGAGTTGTTGCTTCTTGACGGCGAGGGGCCTGTAGCTGGTGG
TTTTGAAGGAGGTGAGCGAGGATCGGAGAGTGGTTAGCGTGGCAGCGCTT
TACGCCTACATAGAGTCGTAGGCAGCACTTGCGCCCAACGTCACGAGTGA
GAGAGAAGAAGGAGCTAACGACTAAAGCGCCAGCTTCAGGACTCAAGACA
GCAGACAGCAGTGCGTGCAGGCCATTGTTTTGGCGCGGCGCGGGGGAGTC
GAAGATATTGCATCGACAGGGGTCTCTACTCGCCGGCGGCATGGTAAGGT
GTCCGCGGAGGGGCAAGCCGCCTCCGAGTGGTTCGAATATTTATATTCCT
CCCTCTGCTCGTCGACCTTTGTGTGCGGTGTTTGTCTGCAGGCCGAAATC
CCGATCCAGGTCATCTTCCCCACGATTTTCGCCACGATCATCTATCTCCT
TGTCGGGTTTCTGCTGGAGGCAAAACCTTACTTCCTCTTCACCCTGTTCA
TCGTGCTCACTTCGAATGCCGGCATCTCCTTGGGGTGAGCGAGGGGTGTT
GTAGTTCTTGGGGGGGGGGCTCTGGTGAATTGCTGAAAGCTTGGAGTTTT
TTTTCGTTGCTGCTGCCGGGAGGCCATGTGTTGGAATGAATGGCCAAGTT
CAGTATTCGCGACCATTCTTTTGCCTTCCTATGTATGTATTTCTATTTTG
TTCGTCGTTTTCGTGTTTCAGTCCGATTGCAGGCTGGAAGGCATCACCTT
CCGCTCATCATGGACTCATGTCCCCTAGATTACCGCGATGAAAAAAGTGT
ACACATGTCATGGTCCGTGTGCACAGCACTTTGTCCATTTTTTTCCCAGC
ACCCACGTAAACGTTTCTCGGCGTACATCGAGGTGGTTGTTCCAAAATCT
CAAGATACCGGCAAACACCTTGTCTGAAGGCGCGGCTTGTGATGGGAGAG
ATTTTTTGTGTTTCTCCTCGACTTTTTATCTGCGAAAATCTGTAGAACTT
GGTTCGTTTTATAGCAAAAACTAACCATCCGATTTTCAAAAAGACTGCGG
CATTTTATCCCTAAATCCGATCCCCAGGTGCGTCTTTTTTTTTTTTCCGA
GGAAAACTCTAGTAGTCGAGAAATCGTGTTTTTTTGCCGAAATCACGTCC
TTTTCTCCTATTCTTTCCCAGTCTAGAGTATCAGTCGCGTGTGGCTTCTA
AATAGCTTGAAATTATACGCCATCACGGGTTTTCTTATTTTAAGCCTATC
TCCTCCCCCCTTGGCCTGGGGATCACTATTATACATCGGATGGCTGGAAT
TTCGGCTGAACCGATTTATTTCGAGAGTTATGACAAAATACGCGATCGGA
CAAATTATTGTGCACGGACTATATGTTGACGCGGGCCTGCCTTAAGAGTT
CTTCCCCAAGCATCTCGTGCGTATAAAGTATGCAGCGGTTGTGTGACGAG
GAAAGAACATTCGGGCGCACACATCCCTTGGTCCCTGCATATATGCCGGT
CGCCCCATTAGTCTAGTTGGTATCCACGCAACCTTCTAATGCACCAGGTC
CCGGGTTCGAGCCCCAGCGAAGCGAGTTTTTTCTCACATTCGTTTCTGGC
AAACTTGAAAGCGATATCGTGAGTAAATGCTACTTCGACTTCATTGTTGA
CGAGGGCGGGGAGTGCTGAACCCTGCTCGCGATAAAAAAAACCTAGGCAG
GCACCGCAGGAGGGGGTCCAACCCCCCCCTCCTATGTGACCCCGGTTGGG
TCGTCTAGCTAGAGTAGAANNNNNNNNNNCCTGTAAATTTACAACTGAAA
AAAACAGCAGCAGCAGCAGCTGCTATGTTTTGAGCACCGAAGCAGCAGCT
GCTGTGCATACTGAAACAAACAGCTGCTGCTTCTTTTCTGTGCTGACGCT
CCCTTGAACCAAACAGGGCTCTACAAAAAAAACCTAGGCAGGCACCGCAG
GAGGGGGTCCAACCCCCCCCTCCTATGTGACCCCGGTTGGGTCGTCTAGC
TAGAGTAGAAGTGGAGTATGGGGGCCAGAGGGGCAGACGACAAAATCCAA
TAATGGGCAGACAAAAAAAAAAAATGATGTATATGTAGAGCCCATGGCAA
CCTGAAGCGCAGACGGCCCAATCCGTCGCCCACCTTCTTTATTTTTGCAG
CCGCGTGCTGAATGCGACCTACCTGTAATCAACCGCGCCACTGCTGTTGC
TGTTGGTTTTGGAAATCACCATCGTCAAACGCCACCGACGACTGGCACCG
CAGTTACGTGGTGTCCGCTCTCGCGAAGAACGTGGACGTGGCTTTGGCTC
TGGGGCCCATGGTGAGGAGCAGACTAAAAAAACAGCGCGTGCTTCGTAGC
CGGGGGCTCGGTTTGTAGATTTGGCTTCGTATAGGTAAGTGTTTTGACTA
TGCAGGCGTAGATAAGAGTGTTTTCGGTCATTCTTCACGTTTCGGCGAGC
CCCTCTCTGCGTATGTGTCTCATCGACCTTTTGCGAATGGTGACAGGCCC
CTGGACCGTCACTTAACGCTGTCGACTAGCGAAGCGTTGTCAGCGATGGA
TGCCTTGCAGGAGTGTTTTTTCGTTGCCTTCCGTTACGCAGCCCGCACGT
AAATTAGCGCATGATAGACAGAGCTGCCCAAAGCAACCCAGCTGCATCGT
TGAACTCCGACACCAGCATCGGGTCAGCCCCATCTCCGATGTCTACGAAA
GGCTCGCCGACTAAGAGAGCCACCGAAAACCTTGCCAGATGTTCGTTCCT
AGCTCCAACAACCTCAACCCGCCGGGTGTGTTTGCGCGCGTGTGTGTTTG
GGAGCAGGTTTTGATGCCCTTCGTTATCTTCGGGGGATTGCTGATCAACC
TCAACGAGATCCCGGCCTACTTTGTATGGTACTCGGTCTTCTCCTTCGTT
CAGTACGGTGAGGGCAAGCAACAGGCCAGCACGCGCACGCCGCCGTGCGC
GTCTTTCTGCAATATTTTGTGTGCGTGCTTGGGTTGGTTGGATGGAAGCG
TATTTTTCCACCGTTGTTTCGTTTCCCCCTCCCTATAAACGCTTCATTTT
TAAAAAGTAAAACAGCAAAGTCGACCATTTTAATATTCCCGCAACATTGG
CTGACACAGCCACGCACTCAGCCTCCAAAAGGATGATTGACGACGAAAAT
ATGGAAGTGGTTCAGTGTTACTGGAATTCGCTTTCAAGGGAGCGCAGAAA
TGAGCTCTTTCTTGACAAGTGCTCGCAGCTGAATCCAATTTTTGCAATGC
AACAAGCTCAGACCTGTAGCTCTGATACCTGCCCAGTGTTTAGCACGAAG
AACTAAGCGAACTGATGCTCTTTGTAGTGCAGAGTACGAACGATTTTAGG
CGTCGACAAACTGCTGCTGTGGCCCTGCAGACGTAAACACGCAAAAAAAA
AAAACCTACCAAAAAGCCCCGCCCTATCGAGGCACACGCTCGCACCGCTG
CGCCAGCCCTTGTAGCTCACAGTCACCATCCCAGACGAAACAAACCACAG
GGGAGGATATCTACTACTCACGACTAGCGTCATTGCGGGTTTGATACCTT
GAATCGCTCTGTGAGCGTCAAATCAGAGCTGCCTTCGAACACGCACGGAG
GCGCTCGGCGAGGCCAGCACCAGTAGACAGCAGCAGCTGTAGTTAGTGCC
CCTCAAGACGGTTGTCGGTATTGGCAAGTATTCTACACACCTGGGACCGT
ATGCTTTCCGATGTGTATAGTTTCCTCGTGGATGAATGCTATCTGACCCA
AACCACCCAAAATCGTGCTGTGGATCGGCGGACTAGCTCTTTCTCTCTCG
TCCGAGCTATTCTAGTTCAGCACCAATGTCAAGCGATGCTGAGAGTTAGT
GCCCTGCAAGAATTGACGCCTAATTGTTTGTCCTACTATGCAGCCAAGGA
TCTTATCCACATGTCCTCTGACTCCTGGCTTCGATGACTTCCTCCGAGCT
GGGCTTTTGACTTCTCCGTATCTACTTACACTGAAGATCTGTATTTTTTT
ACGTCCCAGGAAGTCCCCTCCCTCAAAACCCCAATCGCGTATGCGCCCCC
TTGAAAGCCGGATTCCAGTAGCACTGGGTTATCCACCCCGACGTTGAGAG
GGACCCGGGTCCGACCACTTTACGCGTGCCCCCCCCCCTATCCCTCCCTT
ATAATGGGTACCCCGGGCTACTAAAATAAACAACTACAGGCTACAGGGGC
GTTTCGATCGTGATCTGGGAGACCAAGGACGTGCTTAGGTGCCCACCAGC
ACCGGCTCAGTGCGCCTTCCCGACCGGGCAGTCTGTTTTGGACTACCTTG
AGTTCGAAGGCGGCGACGAAGAGATCTGGCGGAATATATTGATCTTGGTG
AGTTGAGTGGGGGGAGAAAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGTGAA
ACCCGCAGCACGTTATTTTTGTTCATGGGTTTCTAGTGGATCCAGTGCCC
CAGCAACCAATATCAGCATGACACCGAAAATGCGAGGAAAGCGTTCTGCG
CGAGTTTTCCGTTCTTGTGCTATATCTTGCGGGAGGGGCTCCGGATATGT
TGTTTGTTTCGACCTGACAGAGTTGTTGAATGCGTGCATGTACGCCTCCT
CTGAAATATATATTTTGGGTCCAATGAGTGGCCAGTCAGGAGCAACAACG
AAAGCTTCGGAGCCGTGGCGAGTGAGCCTAGTGTATTCAGGCGAATTGAT
GGCGATTGAAAAAGGGTTCGCGGGCATCGGGTTTAGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGATGCCACCAT
CGTAACCTTTCTCAAGAAAACGTCTCGGTTTTTTGGGTGTTGCGTGCTGG
CTGAATGGACGCTGCACTTCGCCCCGCCCCCGTCACCCCTCTTTGTTGCT
ACAACGCTACGACGCAATCGCGCGTCGTCCGCAGGTGGCCCTGACCGTCG
GCTTTCGGGTCCTGGCGTTCTTCACGCTGATGTACCGCAGCCGGCCTACG
GGAGAGCGGGCGTACTAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig4936:564..7881+

>mRNA_L-elsbetiae_contig4936.12896.1 ID=mRNA_L-elsbetiae_contig4936.12896.1|Name=mRNA_L-elsbetiae_contig4936.12896.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1728bp|location=Sequence derived from alignment at L-elsbetiae_contig4936:564..7881+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGTGGCGGAGGTGTACAAGAGGACGCTCATCATGTACCGGAGGGAGCC
GGTGCTGACCAAGGCTCGCCTCACCCAGACGATCGTCGTCGCCCTCCTCG
TGGGCTTGATTTTTCTGCAGCTCGGGGACACGCAGGCTACAGGTGGCGGA
GGTGTACAAGAGGACGCTCATCATGTACCGGAGGGAGCCGGTGCTGACCA
AGGCTCGCCTCACCCAGACGATCGTCGTCGCCCTCCTCGTGGGCTTGATT
TTTCTGCAGCTCGGGGACACGCAGGCTATGCAGAGCATGATGGGCGTGCT
TTTCTTCGTGGCTATCAACCAGAGCATTCTAGGAACGATCGGAGTGCTGC
AGGCGAGTGACAAACACCCGTGCTGCAGAGCATGATGGGCGTGCTTTTCT
TCGTGGCTATCAACCAGAGCATTCTAGGAACGATCGGAGTGCTGCAGGCG
AGTGACAAACACCCGTGCGTCTTCCCGAACGAAATGCCCGTTTTCCTGAG
GGAGCACGATAGCGGGGCCTACCGCGTCGGCTCCTATTTCTTTGGGCGGA
CGCTGGTCTTCCCGAACGAAATGCCCGTTTTCCTGAGGGAGCACGATAGC
GGGGCCTACCGCGTCGGCTCCTATTTCTTTGGGCGGACGCTGGCCGAAAT
CCCGATCCAGGTCATCTTCCCCACGATTTTCGCCACGATCATCTATCTCC
TTGTCGGGTTTCTGCTGGAGGCAAAACCTTACTTCCTCTTCACCCTGTTC
ATCGTGCTCACTTCGAATGCCGGCATCTCCTTGGGGCCGAAATCCCGATC
CAGGTCATCTTCCCCACGATTTTCGCCACGATCATCTATCTCCTTGTCGG
GTTTCTGCTGGAGGCAAAACCTTACTTCCTCTTCACCCTGTTCATCGTGC
TCACTTCGAATGCCGGCATCTCCTTGGGTTACGTGGTGTCCGCTCTCGCG
AAGAACGTGGACGTGGCTTTGGCTCTGGGGCCCATGTTACGTGGTGTCCG
CTCTCGCGAAGAACGTGGACGTGGCTTTGGCTCTGGGGCCCATGGTTTTG
ATGCCCTTCGTTATCTTCGGGGGATTGCTGATCAACCTCAACGAGATCCC
GGCCTACTTTGTATGGTACTCGGTCTTCTCCTTCGTTCAGTACGGTTTTG
ATGCCCTTCGTTATCTTCGGGGGATTGCTGATCAACCTCAACGAGATCCC
GGCCTACTTTGTATGGTACTCGGTCTTCTCCTTCGTTCAGTACGGCTACA
GGGGCGTTTCGATCGTGATCTGGGAGACCAAGGACGTGCTTAGGTGCCCA
CCAGCACCGGCTCAGTGCGCCTTCCCGACCGGGCAGTCTGTTTTGGACTA
CCTTGAGTTCGAAGGCGGCGACGAAGAGATCTGGCGGAATATATTGATCT
TGGCTACAGGGGCGTTTCGATCGTGATCTGGGAGACCAAGGACGTGCTTA
GGTGCCCACCAGCACCGGCTCAGTGCGCCTTCCCGACCGGGCAGTCTGTT
TTGGACTACCTTGAGTTCGAAGGCGGCGACGAAGAGATCTGGCGGAATAT
ATTGATCTTGGTGGCCCTGACCGTCGGCTTTCGGGTCCTGGCGTTCTTCA
CGCTGATGTACCGCAGCCGGCCTACGGGAGAGCGGGCGTACTAAGTGGCC
CTGACCGTCGGCTTTCGGGTCCTGGCGTTCTTCACGCTGATGTACCGCAG
CCGGCCTACGGGAGAGCGGGCGTACTAA
back to top