mRNA_L-elsbetiae_contig4929.12888.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig4929.12888.1
Unique NamemRNA_L-elsbetiae_contig4929.12888.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig4929.12888.1 vs. uniprot
Match: D7FWK8_ECTSI (NAD_binding_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK8_ECTSI)

HSP 1 Score: 481 bits (1238), Expect = 1.300e-161
Identity = 246/317 (77.60%), Postives = 265/317 (83.60%), Query Frame = 1 
Query:  139 MKTSVGLSLCFFAAGVQAFVGHAPVLQTRSLWQVSSSPS------AAKAAAP--EGRRAGRVVVTRMGWGDDVVFSKVKITETGKLAEGQYGLTIDAGDIAKGYAVPGQYVQIRMDPDAKAGFFAIASPPDSRCVGSLEFLIKENDSTKALVGSKAGATVEMSTVMGKGFPIVENFSGYKYDFPIQNVVLSATGTGIAPLRAAIESGVLELPDEEDDGVFGRSCKLYWGCHDEESMPWKERMADWDKRGVEVVPVLSQPSASWTGRTGFVQQAIKEDGIRLPRNSGVLVCGHKEMAEEVKEMALKAGVLDGRVLSNF 1065
            MK+S+ LSLCF A G QAFVGH PV Q RS W   SS S      AA   AP  E R AGRVVVT+MGWGDDVVFSK K+ ETGK+AEGQY LTIDAGDIAK Y  PGQYVQI++   AK GFFAIASPPD+   GSLEFLIKEND+TKALVG KAG +VE+STVMGKGFPI ENF+GYKYDFP+QNVVLSA+GTGIAP RAAIESG LELPD +DDGVFGRSCKLYWGC DEESMPWK+R+  WDKRGVEVV VLSQPS SWTGRTGFVQQAIKE+GI LPRNS VLVCGHKEMAEEVKE+A KAGVLDGRVLSNF
Sbjct:    1 MKSSLALSLCFLAGGAQAFVGHVPVSQPRSPWGGFSSSSSVATRAAASVPAPRAERRTAGRVVVTKMGWGDDVVFSKAKVVETGKIAEGQYALTIDAGDIAKEYTAPGQYVQIKVTSSAKPGFFAIASPPDASS-GSLEFLIKENDATKALVGVKAGGSVEVSTVMGKGFPIKENFTGYKYDFPVQNVVLSASGTGIAPFRAAIESGALELPDADDDGVFGRSCKLYWGCRDEESMPWKDRVEAWDKRGVEVVVVLSQPSESWTGRTGFVQQAIKEEGIPLPRNSAVLVCGHKEMAEEVKEIAEKAGVLDGRVLSNF 316
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BLAST of mRNA_L-elsbetiae_contig4929.12888.1 vs. uniprot
Match: A0A835YXH2_9STRA (NAD_binding_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXH2_9STRA)

HSP 1 Score: 277 bits (708), Expect = 5.200e-83
Identity = 140/262 (53.44%), Postives = 184/262 (70.23%), Query Frame = 1 
Query:  283 RRAGRVVVTRMGWGDDVVFSKVKITETGKLAEGQYGLTIDAGDIAKGYAVPGQYVQIRMDPDAKAGFFAIASPPDSRCVGSLEFLIKENDSTKALVGSKAGATVEMSTVMGKGFPIVENFSGYKYDFPIQNVVLSATGTGIAPLRAAIESGVLELPDEEDDGVFGRSCKLYWGCHDEESMPWKERMADWDKRGVEVVPVLSQPSA-SWTGRTGFVQQAIKEDGIRLPRNSGVLVCGHKEMAEEVKEMALKAGVLDGRVLSNF 1065
            R   R  V    W  +V +    +    K A+G Y LT+DAG+I+ GY +PGQYVQI+   D KAGF+AIAS P +   G  EFL+KE D+ K L   K+G T++MS VMG GFPI E F+GYKYDFP+QNV+L ATGTGIAP+RAAIESG+LE+   +  G FGRSC LY+G H  E M +++++ +W+ +G+ VVPV+S P+A +W GRTGFVQ+A+ EDG+R+PRN+G L+CG KEM  EVK++   AGV  GR L NF
Sbjct:   49 RATSRQTVQCNAWATEVEWKTASLVSNKKAADGLYSLTVDAGEISTGYKMPGQYVQIKTG-DEKAGFYAIASAPKTD--GMFEFLVKETDTNKWLTQMKSG-TLDMSAVMGNGFPIKEEFTGYKYDFPVQNVILVATGTGIAPIRAAIESGLLEV---DTSGPFGRSCTLYYGAHSPERMAYQDKLEEWESKGMTVVPVMSAPAAGAWNGRTGFVQKALGEDGVRVPRNTGALLCGQKEMVAEVKDILGGAGVFAGRQLLNF 303
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BLAST of mRNA_L-elsbetiae_contig4929.12888.1 vs. uniprot
Match: A0A6H5JM17_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM17_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 2.010e-72
Identity = 125/173 (72.25%), Postives = 141/173 (81.50%), Query Frame = 1 
Query:  376 EGQYGLTIDAGDIAKGYAVPGQYVQIRMDPDAKAGFFAIASPPDSRCVGSLEFLIKENDSTKALVGSKAGATVEMSTVMGKGFPIVENFSGYKYDFPIQNVVLSATGTGIAPLRAAIESGVLELPDEEDDGVFGRSCKLYWGCHDEESMPWKERMADWDKRGVEVVPVLSQPS 894
            EG Y LTID GDIAK Y VPGQYVQI++    K  FFAIASPPD+R          END+T+ALVG KAG +VE+S VMGKGFPI ENF+GYKYDFP+QNVVLSA+GTGIAP RAAIESG LELPD +DDGVFGRSCKLYWGC DEES+PWK+R+  WDK+GVEVV VLS+PS
Sbjct:  344 EGHYALTIDVGDIAKEYTVPGQYVQIKVTSSDKPRFFAIASPPDAR----------ENDATEALVGVKAGGSVEVSPVMGKGFPITENFTGYKYDFPVQNVVLSASGTGIAPFRAAIESGALELPDADDDGVFGRSCKLYWGCRDEESIPWKDRVKAWDKQGVEVVIVLSEPS 506
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BLAST of mRNA_L-elsbetiae_contig4929.12888.1 vs. uniprot
Match: A0A7S2UVS4_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVS4_9STRA)

HSP 1 Score: 239 bits (611), Expect = 5.300e-69
Identity = 117/249 (46.99%), Postives = 164/249 (65.86%), Query Frame = 1 
Query:  325 DDVVFSKVKITETGKLAEGQYGLTIDAGDIAKGYAVPGQYVQIRMDPDAKAGFFAIASPPDSRCV-GSLEFLIKENDSTKALVGSKAGATVEMSTVMGKGFPIVENFSGYKYDFPIQNVVLSATGTGIAPLRAAIESGVLELPDEEDDGVFGRSCKLYWGCHDEESMPWKERMADWDKRGVEVVPVLSQPSAS-WTGRTGFVQQAIKEDGIRLPRNSGVLVCGHKEMAEEVKEMALKAGVLDGRVLSNF 1065
            +D+ +++VK+ E  K AEG   + +D GDI K Y  PGQYVQ+R D   K GF+AIA+ P      G+ EFLIKE +    L G++ GA +EM+  MGKG+ I ENF GYKYD+P  N++L A G+GIAP+RAAIE+G+  +          + C+LY+G    + + +K++   W   GVE+VPV+S+P  + WTGRTG++Q A+K DG+ +PRNSG ++CGHKEM E VKE   +AG  +GR L NF
Sbjct:   57 NDIAWNQVKVLENKKAAEGLKSIVLDVGDIEKSYTNPGQYVQLRPDASGKPGFYAIANAPAKAVSKGAFEFLIKETEGNTWLTGAEDGAALEMTGAMGKGYAIQENFLGYKYDWPCINILLFACGSGIAPVRAAIENGLTVMKGSP----LMKQCRLYYGVKTPDHLAYKDKFEAWAADGVEIVPVVSRPEGTGWTGRTGYIQDALKADGVDIPRNSGAIMCGHKEMVESVKETMAEAGSFEGRFLLNF 301
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BLAST of mRNA_L-elsbetiae_contig4929.12888.1 vs. uniprot
Match: A0A7S2G1T3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G1T3_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.880e-68
Identity = 129/259 (49.81%), Postives = 170/259 (65.64%), Query Frame = 1 
Query:  313 MGWGDDVVFSKVKITETGKLAEGQYGLTIDAGD-IAKGYAVPGQYVQIRMDPDAKAGFFAIASPPDSRCVGSLEFLIKENDST------KALVGSKAGATVEMSTVMGKGFPIVENFSGY-KYDFPIQNVVLSATGTGIAPLRAAIESGVLELPDEEDDGVFGRSCKLYWGCHDEESMPWKERMADWDKRGVEVVPVLSQPSASWTGRTGFVQQAIKEDGIRLPRNSGVLVCGHKEMAEEVKEMALKAGVLDGRVLSNF 1065
            MGWGDDVVFS  K+      AEG   +T++AGD I   Y +PGQ+VQI+   D KAGFFAIAS P +   G  E LIK ++ +      + L GSKAG T+ MS  MG GF + +NFS     DFP+QNV+L A G+GI+P+R+AIESG L           G+ C LY+G  D   M + E+  +W+ +GV+VVPV+S+    W GRTG+VQ A+KEDG++L RN+G L+CG K MAEEVKE  ++AGV +GRVL+NF
Sbjct:    1 MGWGDDVVFSTAKVLSNEPAAEGMRSITVEAGDDILGAYTIPGQFVQIKEKEDTKAGFFAIASSPGAT-PGQCELLIKLSEGSDWAPGNQWLCGSKAGETLIMSPAMGSGFKMEDNFSETGANDFPVQNVLLFAAGSGISPIRSAIESGALA----------GKDCTLYYGARDTTFMAYMEKFDEWEAKGVKVVPVMSKADG-WDGRTGYVQAALKEDGVKLARNTGALMCGMKGMAEEVKEALVEAGVDEGRVLTNF 247
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BLAST of mRNA_L-elsbetiae_contig4929.12888.1 vs. uniprot
Match: B7G998_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G998_PHATC)

HSP 1 Score: 224 bits (571), Expect = 5.490e-64
Identity = 114/255 (44.71%), Postives = 159/255 (62.35%), Query Frame = 1 
Query:  313 MGWGDDVVFSKVKITETGKLAEGQYGLTIDAG---DIAKGYAVPGQYVQIRMDPDAKAGFFAIASPPDSRCVGSLEFLIKENDSTKALVGSKAGATVEMSTVMGKGFPIVENFSGYKYDFPIQNVVLSATGTGIAPLRAAIESGVLELPDEEDDGVFGRSCKLYWGCHDEESMPWKERMADWDKRGVEVVPVLSQPSAS-WTGRTGFVQQAIKEDGIRLPRNSGVLVCGHKEMAEEVKEMALKAGVLDGRVLSNF 1065
            MGWG D ++S  K+T   K  E    +T++     + A  Y +PGQYVQ+R+D   K  F AIAS PD+    S EFL+K+ +    L     G  VE+S V+G G+ I EN    KYDFP QN++L A G+G+AP++AA+ESG L++  +       R  +LY+G    E + + ++ ++W+  G EVVPVLSQP  S W GRTG++Q A++EDG+ +PRNSG L+CG K M E VK+   KAGV +GRVL NF
Sbjct:    1 MGWGPDPIWSPSKVTTNSKACESGNSVTLNVSVQPETASEYKLPGQYVQVRLDDSTKPLFLAIASAPDAENA-SFEFLVKKTEGNDWLTSIAPGTAVEVSQVLGNGYSIAENIDSLKYDFPTQNILLFAAGSGLAPIKAALESGQLKVGSDSS-----RQARLYYGERTAEDLCYVDKYSEWEAAGFEVVPVLSQPDESVWKGRTGYIQTALEEDGVDIPRNSGALLCGMKGMTEAVKDFLTKAGVFEGRVLFNF 249
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BLAST of mRNA_L-elsbetiae_contig4929.12888.1 vs. uniprot
Match: A0A7S3QJ99_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ99_9STRA)

HSP 1 Score: 226 bits (575), Expect = 2.520e-63
Identity = 117/263 (44.49%), Postives = 166/263 (63.12%), Query Frame = 1 
Query:  313 MGWGDDVVFSKVKITETGKL-AEGQY-GLTID-AGDIAKGYAVPGQYVQIRMDPDAKAG---FFAIASPPDSRCV---GSLEFLIKENDSTKALVGSKAGATVEMSTVMGKGFPIVENFSGYKYDFPIQNVVLSATGTGIAPLRAAIESGVLELPDEEDDGVFGRSCKLYWGCHDEESMPWKERMADWDKRGVEVVPVLSQPS---ASWTGRTGFVQQAIKEDGIRLPRNSGVLVCGHKEMAEEVKEMALKAGVLDGRVLSNF 1065
            MGWG D ++    IT T    A G + GL +D + D+ + Y VPGQYVQ++ D + + G   F AIAS P +       S+EFL+K+ DS   +     G  + +S V+G GFPI E  SG+K+DFP+QN +L A G+GIAP+RAAIESG L +      G  GR+ +LY+GC     MP+  +  +W+  G+EVVPV+S+P      WTGRTG+VQ  ++EDG+ +PRN+G L+CG K MAE +K++   AGV + RV++NF
Sbjct:   83 MGWGPDPIWESATITSTSAASASGNFVGLKVDVSADLVEAYKVPGQYVQVKQDINDEEGKVLFLAIASAPGAGAETEGSSIEFLVKKTDSNDWITNVDDGTAIAVSQVLGGGFPIEEEMSGFKHDFPLQNCLLFANGSGIAPIRAAIESGQLNIGKP---GEGGRTARLYFGCTTPADMPYLTKFREWETNGIEVVPVISRPEECEGEWTGRTGYVQNLVEEDGVAIPRNTGALLCGVKGMAESIKDLLTTAGVFESRVMTNF 342
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BLAST of mRNA_L-elsbetiae_contig4929.12888.1 vs. uniprot
Match: A0A1Z5J6M8_FISSO (NAD_binding_1 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6M8_FISSO)

HSP 1 Score: 224 bits (570), Expect = 4.460e-63
Identity = 118/254 (46.46%), Postives = 161/254 (63.39%), Query Frame = 1 
Query:  313 MGWGDDVVFSK--VKITETGKLAEGQYGLTIDAG-DIAKGYAVPGQYVQIRMDPDAKAGFFAIASPPDSRCVGSLEFLIKENDSTKALVGSKAGATVEMSTVMGKGFPIVENFSGYKYDFPIQNVVLSATGTGIAPLRAAIESGVLELPDEEDDGVFGRSCKLYWGCHDEESMPWKERMADWDKRGVEVVPVLSQPSASWTGRTGFVQQAIKEDGIRLPRNSGVLVCGHKEMAEEVKEMALKAGVLDGRVLSNF 1065
            MGWG + V+S   VK  +    +     + +D   + A  Y  PGQYVQ+R+D   K  F AIASPPD+      EFLIK+ +  + +    AGA V++S V+G GFPI EN  G+KYDFP QN++L A G+GIAP++AA ESG L + +        R  +LY+G      + + E  ++W+K G++VVPVLSQP A W GRTG+VQ A+ EDG+ +PRNSG L+CG K M+E VK++  KAGV +GRVL NF
Sbjct:   61 MGWGPEPVWSSASVKTNQAACQSGACVKILMDVPPETAAEYKNPGQYVQVRLDDATKPLFLAIASPPDAENA-VFEFLIKKTEGNEWMTSLSAGAAVQISQVLGNGFPIEENLEGFKYDFPTQNLLLFAAGSGIAPIKAAAESGKLNISE-------ARKARLYYGERTAADLCYVELFSEWEKAGIQVVPVLSQPGADWEGRTGYVQAALAEDGVPVPRNSGALLCGMKGMSEAVKDLLQKAGVFEGRVLFNF 306
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BLAST of mRNA_L-elsbetiae_contig4929.12888.1 vs. uniprot
Match: A0A448YXU2_9STRA (NAD_binding_1 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXU2_9STRA)

HSP 1 Score: 221 bits (564), Expect = 1.580e-62
Identity = 117/254 (46.06%), Postives = 164/254 (64.57%), Query Frame = 1 
Query:  313 MGWGDDVVFSK--VKITETGKLAEGQYGLTIDAG-DIAKGYAVPGQYVQIRMDPDAKAGFFAIASPPDSRCVGSLEFLIKENDSTKALVGSKAGATVEMSTVMGKGFPIVENFSGYKYDFPIQNVVLSATGTGIAPLRAAIESGVLELPDEEDDGVFGRSCKLYWGCHDEESMPWKERMADWDKRGVEVVPVLSQPSASWTGRTGFVQQAIKEDGIRLPRNSGVLVCGHKEMAEEVKEMALKAGVLDGRVLSNF 1065
            MGWG D ++S   V+ T+ G L++    + ++   + A+ + +PGQYVQ+R D + K  F AIASPP++      EFLIK+ D    L    A   +E+S V+G GFP+ E F   KYDFP QNV+L A G+GI+P+R+AIESG LE           R+ +LY+G   E+ + + +R   W+K GVEVVPVLSQPS SW GRTG+VQ A++EDG+ +PRN+G L+CG K M E V ++  KAG  +GR+L+NF
Sbjct:   39 MGWGPDPIWSGSVVEDTQIGNLSKECVVVNLEVPPETAQEFTIPGQYVQLRPDEETKPIFLAIASPPEAENA-RFEFLIKKTDDNTWLTEGSA-TNLEISQVLGGGFPVKEEFDSLKYDFPCQNVLLFAAGSGISPIRSAIESGELET-------TGARTARLYYGARTEDDLCFVDRFPLWEKNGVEVVPVLSQPSESWQGRTGYVQNALEEDGVPVPRNTGALMCGMKGMTEAVTDILTKAGTFEGRILTNF 283
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BLAST of mRNA_L-elsbetiae_contig4929.12888.1 vs. uniprot
Match: A0A6U3NQ63_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NQ63_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.400e-61
Identity = 120/276 (43.48%), Postives = 165/276 (59.78%), Query Frame = 1 
Query:  283 RRAGRVVVTRMGWGDDVVFSKVKITETGKLAEGQYGLTIDA---GDIAKGYAVPGQYVQIRM--DPDAKAGFFAIASPPDS---RCVG----SLEFLIKENDSTKALVGSKAGATVEMSTVMGKGFPIVENFSGYKYDFPIQNVVLSATGTGIAPLRAAIESGVLELPDEEDDGVFGRSCKLYWGCHDEESMPWKERMADWDKRGVEVVPVLSQPS---ASWTGRTGFVQQAIKEDGIRLPRNSGVLVCGHKEMAEEVKEMALKAGVLDGRVLSNF 1065
            R +G V+   MGWG D ++SK  +T           + I      D+A  Y V GQYVQ+R   D DAK  F AIASPP +      G    + EFLIK+ ++   +        V++S V+G GFP  EN  G+KYDFP QNV+  ATG+GIAP+RAAIESG + +      G  GR+ +LY+G    E MP+ ++ A W+  G E+VPV+S+P    A W GRTG+VQ A++EDG+ +PRNS  L+CG K M E VK++   AGV +GR+++NF
Sbjct:   53 RSSGTVIY--MGWGPDPIWSKCAVTSNAPACPSSSCVCISVKMPADVAAEYKVAGQYVQVRPEGDDDAKPIFLAIASPPTASADEAAGPSSTTFEFLIKKTENNDWITNIPPSTCVDVSQVLGNGFPTAENMEGFKYDFPTQNVLFFATGSGIAPIRAAIESGQMGV---NPPGQGGRTARLYYGVSTPEDMPYADKFAQWELAGFEIVPVVSRPEETGAEWFGRTGYVQNALEEDGVAVPRNSAALLCGVKGMTESVKDLLSNAGVFEGRIMTNF 323
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4929.12888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWK8_ECTSI1.300e-16177.60NAD_binding_1 domain-containing protein n=1 Tax=Ec... [more]
A0A835YXH2_9STRA5.200e-8353.44NAD_binding_1 domain-containing protein n=1 Tax=Tr... [more]
A0A6H5JM17_9PHAE2.010e-7272.25Reverse transcriptase domain-containing protein (F... [more]
A0A7S2UVS4_9STRA5.300e-6946.99Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S2G1T3_9STRA1.880e-6849.81Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
B7G998_PHATC5.490e-6444.71Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3QJ99_9STRA2.520e-6344.49Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1Z5J6M8_FISSO4.460e-6346.46NAD_binding_1 domain-containing protein n=2 Tax=Fi... [more]
A0A448YXU2_9STRA1.580e-6246.06NAD_binding_1 domain-containing protein n=1 Tax=Ps... [more]
A0A6U3NQ63_9STRA1.400e-6143.48Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4929contigL-elsbetiae_contig4929:5956..12027 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score481.5
Seed ortholog evalue3e-133
Seed eggNOG ortholog2880.D7FWK8
KEGG koko:K20784
KEGG Pathwayko00514,map00514
Hectar predicted targeting categorychloroplast
EggNOG free text desc.Oxidoreductase NAD-binding domain
EggNOG OGs2QQ7C@2759,COG0543@1
COG Functional cat.CH
CAZyGT77
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Exons6
Model size2486
Cds size930
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4929.12888.1prot_L-elsbetiae_contig4929.12888.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig4929 6094..10609 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816490.9408767-UTR-L-elsbetiae_contig4929:5955..60931622816490.9408767-UTR-L-elsbetiae_contig4929:5955..6093Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig4929 5956..6093 +
1691683597.6092696-UTR-L-elsbetiae_contig4929:5955..60931691683597.6092696-UTR-L-elsbetiae_contig4929:5955..6093Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig4929 5956..6093 +
1622816491.02601-UTR-L-elsbetiae_contig4929:10609..120271622816491.02601-UTR-L-elsbetiae_contig4929:10609..12027Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig4929 10610..12027 +
1691683597.6865802-UTR-L-elsbetiae_contig4929:10609..120271691683597.6865802-UTR-L-elsbetiae_contig4929:10609..12027Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig4929 10610..12027 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816490.9522066-CDS-L-elsbetiae_contig4929:6093..63001622816490.9522066-CDS-L-elsbetiae_contig4929:6093..6300Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4929 6094..6300 +
1691683597.6217895-CDS-L-elsbetiae_contig4929:6093..63001691683597.6217895-CDS-L-elsbetiae_contig4929:6093..6300Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4929 6094..6300 +
1622816490.9654703-CDS-L-elsbetiae_contig4929:7024..70481622816490.9654703-CDS-L-elsbetiae_contig4929:7024..7048Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4929 7025..7048 +
1691683597.63911-CDS-L-elsbetiae_contig4929:7024..70481691683597.63911-CDS-L-elsbetiae_contig4929:7024..7048Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4929 7025..7048 +
1622816490.976307-CDS-L-elsbetiae_contig4929:8140..82891622816490.976307-CDS-L-elsbetiae_contig4929:8140..8289Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4929 8141..8289 +
1691683597.6506343-CDS-L-elsbetiae_contig4929:8140..82891691683597.6506343-CDS-L-elsbetiae_contig4929:8140..8289Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4929 8141..8289 +
1622816490.9878151-CDS-L-elsbetiae_contig4929:8913..90961622816490.9878151-CDS-L-elsbetiae_contig4929:8913..9096Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4929 8914..9096 +
1691683597.6594882-CDS-L-elsbetiae_contig4929:8913..90961691683597.6594882-CDS-L-elsbetiae_contig4929:8913..9096Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4929 8914..9096 +
1622816490.9992003-CDS-L-elsbetiae_contig4929:9520..97111622816490.9992003-CDS-L-elsbetiae_contig4929:9520..9711Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4929 9521..9711 +
1691683597.6684709-CDS-L-elsbetiae_contig4929:9520..97111691683597.6684709-CDS-L-elsbetiae_contig4929:9520..9711Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4929 9521..9711 +
1622816491.0119812-CDS-L-elsbetiae_contig4929:10433..106091622816491.0119812-CDS-L-elsbetiae_contig4929:10433..10609Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4929 10434..10609 +
1691683597.6772058-CDS-L-elsbetiae_contig4929:10433..106091691683597.6772058-CDS-L-elsbetiae_contig4929:10433..10609Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4929 10434..10609 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig4929.12888.1

>prot_L-elsbetiae_contig4929.12888.1 ID=prot_L-elsbetiae_contig4929.12888.1|Name=mRNA_L-elsbetiae_contig4929.12888.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=310bp
MKTSVGLSLCFFAAGVQAFVGHAPVLQTRSLWQVSSSPSAAKAAAPEGRR
AGRVVVTRMGWGDDVVFSKVKITETGKLAEGQYGLTIDAGDIAKGYAVPG
QYVQIRMDPDAKAGFFAIASPPDSRCVGSLEFLIKENDSTKALVGSKAGA
TVEMSTVMGKGFPIVENFSGYKYDFPIQNVVLSATGTGIAPLRAAIESGV
LELPDEEDDGVFGRSCKLYWGCHDEESMPWKERMADWDKRGVEVVPVLSQ
PSASWTGRTGFVQQAIKEDGIRLPRNSGVLVCGHKEMAEEVKEMALKAGV
LDGRVLSNF*
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mRNA from alignment at L-elsbetiae_contig4929:5956..12027+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig4929.12888.1 ID=mRNA_L-elsbetiae_contig4929.12888.1|Name=mRNA_L-elsbetiae_contig4929.12888.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6072bp|location=Sequence derived from alignment at L-elsbetiae_contig4929:5956..12027+ (Laminarionema elsbetiae ELsaHSoW15)
CGAACGTGTATCCCCGCTCCCCTGTCAGGGTTTGCTAGTGTAGCCAGGTG
GGGTGCTCCTATTTGGGGGGCCGGTGGCGAGGCGGGCGCAAAACATACGT
TGTGACGTTGTGCTTCACTGTCCTGAGAGATCTGTACGATGAAGACTTCC
GTCGGTCTATCACTGTGCTTCTTTGCCGCAGGGGTGCAGGCCTTTGTCGG
CCATGCCCCTGTGCTGCAGACTCGATCGCTGTGGCAAGTGTCTAGCTCTC
CTTCTGCAGCCAAGGCAGCAGCGCCAGAGGGAAGGAGAGCAGGCCGGGTT
GTGGTTACGAGGATGGGATGGGGAGACGATGTGGTTTTCAGTAAGGTGCG
AACACGCAAGAGACCGCACAAGGCATGCAGATGATGTAGGGTAGAGACGG
CGAGACAGGTCGAAATGTGCAATGATCATGAAGACTCATGAGGAGAGGAA
ATCAAGCTCCTGCTGCGCTCGTTTGGAATGAGAAAGCCTGCAGAGCGTGA
TGCATACATGTGGAATGTGTGAGACAACGGCGCATGAGAAAATCAGTTCG
GGTTGTCTCATTACAATTTCTTGCGTGGAATGCCGCATGTACATACAAAA
GCAAAACCACTTCGCTGAGAGACGAAATCGAGGAACAAACCGAAAATCGA
TCATGATAAATTAACTGCCCGCTTCTATGTATGTAATCCCCCGCGTTTGT
ACATATCAAAGATCAAGAGAGCGCCACTTTTGCATTTTGCACCCACCCCG
CAGTACGCAGCAGCAGAACCGCAATGGCAGCAGTTGCTGGACTTCTACCG
ATTTCCACATCTTCCATTTTGCACATGATGTCTGAAACAACCACTGTTCA
TCTTTCCCACGGATGTGGACACTTGAGAGGTTTTTTAGGGCAACTGGCAA
TTTTTTCGAAGCAAAGAGTTCGCATCTTACGCGCTCGCCGCAATATATCA
CCCCACCCCCCTACCCCTGATCCCTGATACTGACCCATAACCCGTACCCC
TTCTCATCATCCCTTTCCGACGTTACCTTTCCTACCTTATCTTCGCATCT
CTCCACCTCGCGAATGTAGGTCAAGATAACCGAGACGGGAAAGGTGAGGC
ACGAGGGGTGACGGCATTAAATTCATTTGTTGTTCACCCCCGACACGTTG
ACTACATACGTACCGAAGGCTGCGCTCTTTACATGTCTAATTAAATATTA
TTCGGTGATGGTTTGTGCTGAGTGTATAAGCAGTCCTTTTTTCTGCTGAT
CAATGAGCAGAAAAGGTAGAGAGAGGGCACGGTAGAGTGTTGTGTTGTAC
GTAGGGTGCGCTTAGGAACGCTGCGACTAATTTGCCCAAGGAGCGTTTCA
AACCAGTGAGGGAAACGACGTGATGTCAGCAGGGATGTGTATCATTTTCA
GGACACTTTATTTCTCGCTCTTCCAGCAGCAGTGTGTGCGTTGCGGCATC
CTTGAACGCAGCAAGCCGACGGGCAAAAGGGGTTACGGGTTTGCAAACAT
GGCGAGGCGTTTGGCACCTACCCACCCGTCTCTTCAGGTGGCACATTCAT
GCGTGCAATGGTGGTTCGGGACCAACCACCCCGGGTTGTATTCGGTGTTG
TGTCGAAGAGGACACGAAACGACCGGCGTACAGCAGCTGTGCGATAGGTC
CATCTGAGGATACGCCTCAGGTCTATCTGAGGACGCGCCCTGCATATCAA
CTTCTATATAAAACACTTTTAGAGCCCAGTCGTGCTTTGAGGTGGATGGG
CGTACGGGTGACTTCATGATTTCACCCCGTCGCCACGAGAGAGGAAGGGC
AGATGAGGGACGGTCTCTTTTATTTCGCCAGCTCCGGACAAGGCATTTTT
TTTTTTCCCGTGCAGGCGGGACCCAGATGCCACCGACAGCAGGGTCGGCT
TTGCCTCCCGCACGCTGATGATCCACCCAAATGGGCGCGAAGCCCTACCA
GCAAACCCGTCAAGCCCAAACCGATCCCGAACGATTCCTCGCACACACGC
CATGCATGATGGCCCGGTACTGAACGACACAACACAACAGCAACTGCAAG
ACCGTTTCCTGATGAAGCGTGCGTCATCGGCGTTCCACTCCACTCTGTCC
TCTTTTGTTTATTTTTGTGGCGTTTAGATACTCATGTAAACCTGCGCGGG
GGGATTCTCTTTCTCTTTCTTCTTCTTTCTTACAGCTGGCGGAGGGCCAG
TACGGCCTCACCATCGACGCCGGGGACATTGCCAAGGGGTACGCCGTCCC
GGGGCAGTACGTCCAGATCCGGATGGATCCCGACGCCAAGGCGGGCTTCT
TCGCCATCGCCTCCCCTCCCGACTCTAGGTGTGTGTGGTGTGTTTGTAGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGAATGTGTCTGGGCGCCGCCAAGTTAAAACAT
CGCCGCCGCGACGAGTGTATACCCGCCGGCGGTCGTGTCGCCGTCCAAGC
CAAGCGGTGTTTCGTGGGTGACAAACCACGCGGCGGGACGGCGGTGCGTG
CGGTGCCGCGAGGTGTTTTTTGAGCCTCGAGAAACCGCAGCAGTGCGCGG
GGCGCGCTCGCCGCGGGGTGCGCGCTCATGCGGGCAGAGTAGTCGTGCTG
TTTATGCGACCCAGGCAGCAGCAAATACGGGGCGTCGTCTATTTCTCGTG
CTGATTGGGTTGATAAAGCGTTGGTGGGCGTACGGTACTTGACCCCCCCC
CCCCTCCGGGTGGACAGCAGAAACATACTGAATATAACTTTTTTCGTCAA
ATAATTTGGACAGCCCCAAAGCGTGTACCCCCCTCCCTCCCTGTCCACAC
ACATACACACACAGTCCCTGACACAGTTTACCCGTCCCCCGTTCCCCCTC
CCCGCTGTTTTTGGCGTTTTGTCCGCTTGTTGGTCATTTTGACGACGGTC
GGCATTAGCGGCTCTCTCGAGTTCCTCATCAAGGAGAACGACTCGACGAA
AGCACTGGTGGGGTCGAAGGCCGGGGCCACTGTGGAGATGTCCACCGTGA
TGGGCAAGGGGTTCCCCATCGTGGAGAACTTCAGCGGGTACAAGTACGAC
TTCCCGATCCAGAACGTCGTCCTTTCGGCGACTGGCACGGGGTGAGTGGG
TGGGTGGGGTGTTGTAGGTTCAACGCCGGCGGTCGGTTGTGTCTTCTGGC
GACTCCTGGCCAACTCTGTTGTGTTTAGTCTCCTGAAAACACCTTGTCGC
ATAGTATAGCAGTTGAACGACGTTGTTGCTGTGGTGCTGTTGCTGTTGCT
GTTGCTGTTGCTTTCTGATCGTGAGCGGGCCGGGGCCTTGCCGTGTCAAG
CACACCACCACCGCCGCTCATACTTTTATCCGCCCTCCCTTGTTTATCTG
CGGCTCTCTTTCGTTGTGTTTTTGTTCCTTCCTGCGCGGGTGGTTTTATT
TTATTCCTGTCTTTTTTCAGCTATTTATTGTGTGCATTTTTCATCGAAAC
AAGCGCTGCACCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCGC
CCCCCCTCAAAACAGGATCGCGCCCTTGCGCGCCGCGATCGAGTCCGGCG
TGCTGGAGCTGCCGGACGAAGAGGACGACGGGGTCTTCGGGCGGTCGTGC
AAGCTGTACTGGGGCTGCCACGACGAGGAGAGCATGCCGTGGAAGGAACG
GATGGCGGACTGGGACAAGCGCGGCGTGGAGGTGGTGCCCGTGCTCTCTC
AGCCGAGTGAGTTGCAAAGTTCGTACATGTGGCTGTGGCTGTGGTTTGCT
CCATACGTGCATATGTAGCTGCTGCGCATCTCTCTCTCTCTCTCTCTCTC
TCTACGTCTGTGTCTCTCTTTGTCTCCATCTCTGTCTCTGTCACACACGC
ACAAAATATAGCTGGTAAAACACGGCCATAGTTCCCTCTGGTTTTACCTG
AAAGCAGGCAAACAAAAAAGAAAAACAATGAGAGCCGAAGCGGAGCGCGT
TTCCAACCTGCTCCACCGCAAGCCATCCCAGCTCCGCCTCTCAGCCTCAG
TGTAATATTTTGCGGAAACAACCGTCTATTGTCGAAGCGAAATATCGCTG
CCAGCGGCTTGTTTTTCGAAGTCAATCTCGTAGCCCCCCAAACCCAAACC
TGCCATACTCAAAAGTAGCCGAACACAACCGTTTCCCACTCCGAGTCGCG
CCACAAGACCTCCTCTCGGCCAGGTTTGATTCCCTCCCACTGCCCCCTCC
CTACCCGGGTGATTTGCTGGATTTTCTCCACCTCGAACCGTGTGTCCGTG
GAATCGCGGCCAAACAGCTGGGGCAGGCTAACACTGAGCAATCGCATTCG
TCGCCCCGGTCCCCCTGCCCCACGGCTTTCTCTCGAGAGTACGGAGATCA
GGGGGGCACCGGAAATTCCAAGCCAACGTCACCCAAGCCAACATATTTTC
CACCGTGCCCCCCCCCCCCCCACCTCAGGCGCGTCGTGGACCGGGCGCAC
GGGCTTCGTGCAGCAGGCGATCAAGGAGGACGGGATCCGCCTGCCCCGCA
ACAGCGGCGTGCTCGTTTGCGGGCACAAGGAGATGGCGGAGGAGGTTAAG
GAAATGGCTCTCAAGGCGGGAGTGCTCGACGGCCGAGTGCTGTCCAACTT
TTAGCTTTTTTTGTTTTTTTGCTTTTAAGCGGGTGTGCATGCTTAGCTGT
CATGCTGCCGTGCATCGATCGGTTCAGCTCGGGCTTTGAAATGAATCTTG
ATTCCATTTCGGGGTCGCGCGTTTCGGCGTTGGTTTCGGTTTCGAACTTG
ACTCGGTTCGGCCTGATGGAACGAACCACCATGATAGAAATGGCCACCGC
CAGATTTCGTAAAAGGGTAGGGAGGCATAGATACGGGGGCGGTGAGCAAG
CAGCACTTTTCGCTGGTTTGTTCAGAACTATCTTGTGGTCTTATGGGTGA
GGTCGTTGCTGGGAAATCATTTTTGGGATTACAGCAGGTAGGGGGGTGTC
TTGGGCATGCAAGGAGCGCCGATAGAAGAGACAATTCTCAGTTAAGCCAA
CCCTTGCCTGCCTGAGTGTTCAACAGCGTCTGGCTTCGTGTTGGAGTGGT
TCTACTGGGGACGTCACCAAATCCTGACTGAAGGTTTGCATCTAGATGTG
TATGTACGTGTGACACTGTTGGGAGGAAAATTGAGACAAAAACAAATGGT
GCAAAAAAATGACTGGGTGCGCGCGCGCTCCACACACTCATAATAGCGTG
TCTGGTTTTTAATTTATGCATACAAATGTCAGCAGCCTACGTCCAGTCTG
TGAAAAAGTCGTTCCAGAGGGAGCTAGCTTGTCGTAGGCACACTAACCCT
CTTCTTTCCGTCCAAGACATACTCGCACAAAATCTGGTTTTTATGTTTTT
ATTTGATCTTCCCTGAAAGTTTTCCCTGTTCGAGCTGTGATTTGAATTTT
CGGAGGTGGAGGGGTGACCCGGGCTTTGCACAGTGCTGCCGTCGAGGTGC
AGCACAGTTTGGACGGCCGAACGCCCCTGGCAATATTGTTGTTCAGTTGC
ATCCAAAAACAGATGTAGAAACTGCTGCCGGTTTGTCTCTCGTAAGGACC
GATGCGCTAGCCACCCCACTTGCCAATTTTTCATTTTTTCAGGGTACCCC
ATCATTGGGTTTGTTAGCCTGTGACCACGGGAATCGAACGGATCAAGTTC
TCGATCTGTCCTGGAGGTACTCTGGGTACATGAAGAGATCGGAATGACTT
TCAGTGAGAAGGCAACAACAACACTTGTTTAGGGGGGTAACTTTGTGGTG
CAGCCAGTGCCTCCGGCGGAGAGGGAGCTGGACAATATCGAACGAATCGA
AAACTACCACTAAATACTGTCGCTCTGCTCTGCTTTGTTTCGTAACACTA
ACTCCTCATTTCTCTTGGCTCAATAAAAATGTGGCATCCGCCTGATGGGA
AAGCAGAGGGCTCTCGTCTCTTGCACCCGGTCCTTTTCCCGCTCTGTCGG
CGGGCGGGAGAAGGCCTACGAAGTGTTTGTATTGTGTTCCCCGCTCCTAA
TTCGTTAGTATTATTGTACCCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig4929:5956..12027+

>mRNA_L-elsbetiae_contig4929.12888.1 ID=mRNA_L-elsbetiae_contig4929.12888.1|Name=mRNA_L-elsbetiae_contig4929.12888.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1860bp|location=Sequence derived from alignment at L-elsbetiae_contig4929:5956..12027+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGACTTCCGTCGGTCTATCACTGTGCTTCTTTGCCGCAGGGGTGCA
GGCCTTTGTCGGCCATGCCCCTGTGCTGCAGACTCGATCGCTGTGGCAAG
TGTCTAGCTCTCCTTCTGCAGCCAAGGCAGCAGCGCCAGAGGGAAGGAGA
GCAGGCCGGGTTGTGGTTACGAGGATGGGATGGGGAGACGATGTGGTTTT
CAGTAAGATGAAGACTTCCGTCGGTCTATCACTGTGCTTCTTTGCCGCAG
GGGTGCAGGCCTTTGTCGGCCATGCCCCTGTGCTGCAGACTCGATCGCTG
TGGCAAGTGTCTAGCTCTCCTTCTGCAGCCAAGGCAGCAGCGCCAGAGGG
AAGGAGAGCAGGCCGGGTTGTGGTTACGAGGATGGGATGGGGAGACGATG
TGGTTTTCAGTAAGGTCAAGATAACCGAGACGGGAAAGGTCAAGATAACC
GAGACGGGAAAGCTGGCGGAGGGCCAGTACGGCCTCACCATCGACGCCGG
GGACATTGCCAAGGGGTACGCCGTCCCGGGGCAGTACGTCCAGATCCGGA
TGGATCCCGACGCCAAGGCGGGCTTCTTCGCCATCGCCTCCCCTCCCGAC
TCTAGGTGTGTCTGGCGGAGGGCCAGTACGGCCTCACCATCGACGCCGGG
GACATTGCCAAGGGGTACGCCGTCCCGGGGCAGTACGTCCAGATCCGGAT
GGATCCCGACGCCAAGGCGGGCTTCTTCGCCATCGCCTCCCCTCCCGACT
CTAGGTGTGTCGGCTCTCTCGAGTTCCTCATCAAGGAGAACGACTCGACG
AAAGCACTGGTGGGGTCGAAGGCCGGGGCCACTGTGGAGATGTCCACCGT
GATGGGCAAGGGGTTCCCCATCGTGGAGAACTTCAGCGGGTACAAGTACG
ACTTCCCGATCCAGAACGTCGTCCTTTCGGCGACTGGCACGGGCGGCTCT
CTCGAGTTCCTCATCAAGGAGAACGACTCGACGAAAGCACTGGTGGGGTC
GAAGGCCGGGGCCACTGTGGAGATGTCCACCGTGATGGGCAAGGGGTTCC
CCATCGTGGAGAACTTCAGCGGGTACAAGTACGACTTCCCGATCCAGAAC
GTCGTCCTTTCGGCGACTGGCACGGGGATCGCGCCCTTGCGCGCCGCGAT
CGAGTCCGGCGTGCTGGAGCTGCCGGACGAAGAGGACGACGGGGTCTTCG
GGCGGTCGTGCAAGCTGTACTGGGGCTGCCACGACGAGGAGAGCATGCCG
TGGAAGGAACGGATGGCGGACTGGGACAAGCGCGGCGTGGAGGTGGTGCC
CGTGCTCTCTCAGCCGAGATCGCGCCCTTGCGCGCCGCGATCGAGTCCGG
CGTGCTGGAGCTGCCGGACGAAGAGGACGACGGGGTCTTCGGGCGGTCGT
GCAAGCTGTACTGGGGCTGCCACGACGAGGAGAGCATGCCGTGGAAGGAA
CGGATGGCGGACTGGGACAAGCGCGGCGTGGAGGTGGTGCCCGTGCTCTC
TCAGCCGAGCGCGTCGTGGACCGGGCGCACGGGCTTCGTGCAGCAGGCGA
TCAAGGAGGACGGGATCCGCCTGCCCCGCAACAGCGGCGTGCTCGTTTGC
GGGCACAAGGAGATGGCGGAGGAGGTTAAGGAAATGGCTCTCAAGGCGGG
AGTGCTCGACGGCCGAGTGCTGTCCAACTTTTAGGCGCGTCGTGGACCGG
GCGCACGGGCTTCGTGCAGCAGGCGATCAAGGAGGACGGGATCCGCCTGC
CCCGCAACAGCGGCGTGCTCGTTTGCGGGCACAAGGAGATGGCGGAGGAG
GTTAAGGAAATGGCTCTCAAGGCGGGAGTGCTCGACGGCCGAGTGCTGTC
CAACTTTTAG
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