mRNA_L-elsbetiae_contig4910.12857.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4910.12857.1 vs. uniprot
Match: D7FU33_ECTSI (Metallophos domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU33_ECTSI) HSP 1 Score: 455 bits (1171), Expect = 1.520e-148 Identity = 232/303 (76.57%), Postives = 254/303 (83.83%), Query Frame = 3 Query: 6 QERWALGWRVLEVVEARFESGLHPPRVIAIGDVHGCMNELKDLVRKVEYWPGDLLLFLGDLVAKGPNSAGAVRTARELGGVSVRGNHEFEVLRWLDVTHNGHRRTPTAHHRIAMSLSEEDGAWLKNSPWYFRCPDLDALFVHAGFTPGVSMRKQNPRMMMNMRSLTLEAGTATSKVVENRPWAREWLGPETVFFGHDAARGLQVLDQAMGLDTGCVYGGRLTACVLPERRLVSVASKSAYMQYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESDGRHRSPYEKLSPG 914 Q++ +LGWRVLEVVEARFESGLHPPR++AIGDVHGC+NE+KDLVRKVEYWPGDLLLFLGDLVAKGPNSAG VRTARELGGVSVRGNHEFEVLRWL+V N + R P+AHH+IAMSL E+DG WLKNSPWYF+C +LDALFVHAGF PGVSM++QNPRMMMNMRSLTLE G TSKVVENRPWAREW GP+TVFFGHDAARGLQVLDQAMGLDTGCVYGGRLTAC+LPERRLVSVASK+AYMQY+ XXXXXXXXXX E +DGR RSPY+KLSPG Sbjct: 699 QQQASLGWRVLEVVEARFESGLHPPRIVAIGDVHGCVNEMKDLVRKVEYWPGDLLLFLGDLVAKGPNSAGVVRTARELGGVSVRGNHEFEVLRWLNVGENENGRGPSAHHQIAMSLGEDDGLWLKNSPWYFQCEELDALFVHAGFIPGVSMKRQNPRMMMNMRSLTLEGGAPTSKVVENRPWAREWAGPDTVFFGHDAARGLQVLDQAMGLDTGCVYGGRLTACILPERRLVSVASKAAYMQYRKKRRRSVRGSGAGGGWSEQRXXXXXXXXXXGTGGD-------ERNDGRLRSPYDKLSPG 994
BLAST of mRNA_L-elsbetiae_contig4910.12857.1 vs. uniprot
Match: A0A6H5L3E7_9PHAE (Metallophos domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E7_9PHAE) HSP 1 Score: 454 bits (1169), Expect = 2.690e-146 Identity = 235/299 (78.60%), Postives = 256/299 (85.62%), Query Frame = 3 Query: 18 ALGWRVLEVVEARFESGLHPPRVIAIGDVHGCMNELKDLVRKVEYWPGDLLLFLGDLVAKGPNSAGAVRTARELGGVSVRGNHEFEVLRWLDVTHNGHRRTPTAHHRIAMSLSEEDGAWLKNSPWYFRCPDLDALFVHAGFTPGVSMRKQNPRMMMNMRSLTLEAGTATSKVVENRPWAREWLGPETVFFGHDAARGLQVLDQAMGLDTGCVYGGRLTACVLPERRLVSVASKSAYMQYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESDGRHRSPYEKLSPG 914 +LGWRVLEVVEARF+SGLHPPR++AIGDVHGC+NE+KDLVRKVEYWPGDLLLFLGDLVAKGPNSAG VRTARELGGVSVRGNHEFEVLRWL+V N + R P+AHH+IAMSL E+DG WLKNSPWYF+C +LDALFVHAGFTPGVSM++QNPRMMMNMRSLT+E G TSKVVENRPWAREW GP+TVFFGHDAARGLQVLDQAMGLDTGCVYGGRLTAC+LPERRLVSVASK+AYMQY+ XXXXXXXXXXXXXX E SDGR RSPY+KLSPG Sbjct: 903 SLGWRVLEVVEARFKSGLHPPRIVAIGDVHGCVNEMKDLVRKVEYWPGDLLLFLGDLVAKGPNSAGVVRTARELGGVSVRGNHEFEVLRWLNVGENENGRGPSAHHQIAMSLGEDDGLWLKNSPWYFQCEELDALFVHAGFTPGVSMKRQNPRMMMNMRSLTIEGGAPTSKVVENRPWAREWAGPDTVFFGHDAARGLQVLDQAMGLDTGCVYGGRLTACILPERRLVSVASKAAYMQYRKKRRRSVRGSGAGGGWSEQXXXXXXXXXXXXXXGD-------ERSDGRLRSPYDKLSPG 1194
BLAST of mRNA_L-elsbetiae_contig4910.12857.1 vs. uniprot
Match: A0A835ZAI5_9STRA (Bis-tetraphosphatase, symmetrical n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAI5_9STRA) HSP 1 Score: 306 bits (784), Expect = 4.670e-100 Identity = 147/222 (66.22%), Postives = 178/222 (80.18%), Query Frame = 3 Query: 78 PRVIAIGDVHGCMNELKDLVRKVEYWPGDLLLFLGDLVAKGPNSAGAVRTARELGGVSVRGNHEFEVLRWLDVTHNG--HRRTPTAHHRIAMSLSEEDGAWLKNSPWYFRCPDLDALFVHAGFTPGVSMRKQNPRMMMNMRSLTLEAGTATSKVVENRPWAREWLGPETVFFGHDAARGLQVLDQAMGLDTGCVYGGRLTACVLPERRLVSVASKSAYMQYK 737 PRVIAIGDVHGC+ EL++L+RK +Y PGDLLLFLGDLVAKGP+S GA+R ARELGG++VRGNHEFEVLRW + G H + H+ IA +L+ ED AWL++SPWY DLDALFVHAGF GV + +QNPR+MMNMRS+ L GTATSK E PWAR W GP+TVFFGHDA RGLQV + A+G+DTGCVYGGRLTAC+LPERRL+SV +++ Y+ +K Sbjct: 9 PRVIAIGDVHGCVEELQELIRKADYRPGDLLLFLGDLVAKGPDSIGAIRMARELGGIAVRGNHEFEVLRWHQIISTGGEHPLIGSEHYHIAKNLTAEDVAWLRSSPWYMHSRDLDALFVHAGFVSGVRLFRQNPRLMMNMRSI-LPDGTATSKHFEAWPWARLWEGPQTVFFGHDAERGLQVHEHAVGIDTGCVYGGRLTACILPERRLISVDARNEYITFK 229
BLAST of mRNA_L-elsbetiae_contig4910.12857.1 vs. uniprot
Match: A0A7S2SHC8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SHC8_9STRA) HSP 1 Score: 269 bits (687), Expect = 6.080e-84 Identity = 129/222 (58.11%), Postives = 163/222 (73.42%), Query Frame = 3 Query: 78 PRVIAIGDVHGCMNELKDLVRKVEYWPGDLLLFLGDLVAKGPNSAGAVRTARELGGVSVRGNHEFEVLRWLDVTHNGHRRTP--TAHHRIAMSLSEEDGAWLKNSPWYFRCPDLDALFVHAGFTPGVSMRKQNPRMMMNMRSLTLEAGTATSKVVENRPWAREWLGPETVFFGHDAARGLQVLDQAMGLDTGCVYGGRLTACVLPERRLVSVASKSAYMQYK 737 PRVIAIGDVHGC++EL+ L+R+ Y PGD+++FLGDLV+KGP+S V+ ARE+G + VRGNH+FEV+RW +G + H IA LS+ D W+ + PWY +L+ALFVHAGF G+ + KQNPR+MMNMRS+ L GT TSK N PWAR W GP+TV FGHDA R LQ + A+GLDTGCVYGGRLTAC+LPE+RLVSV++K Y QY+ Sbjct: 114 PRVIAIGDVHGCLDELQALLRRCNYQPGDVVVFLGDLVSKGPDSLSVVQMAREMGAIGVRGNHDFEVIRWHQAIKSGADPPVIGSEHFHIANGLSKADLKWMYSLPWYISSKELNALFVHAGFVSGIRLGKQNPRLMMNMRSI-LPDGTVTSKFFNNWPWARLWDGPQTVLFGHDADRSLQQYEHAIGLDTGCVYGGRLTACILPEKRLVSVSAKREYFQYR 334
BLAST of mRNA_L-elsbetiae_contig4910.12857.1 vs. uniprot
Match: A0A7S4AJV0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AJV0_9STRA) HSP 1 Score: 275 bits (702), Expect = 6.620e-84 Identity = 134/241 (55.60%), Postives = 174/241 (72.20%), Query Frame = 3 Query: 21 LGWRVLEVVEARFESGLHPPRVIAIGDVHGCMNELKDLVRKVEYWPGDLLLFLGDLVAKGPNSAGAVRTARELGGVSVRGNHEFEVLRWLDVTHNGHRR--TPTAHHRIAMSLSEEDGAWLKNSPWYFRCPDLDALFVHAGFTPGVSMRKQNPRMMMNMRSLTLEAGTATSKVVENRPWAREWLGPETVFFGHDAARGLQVLDQAMGLDTGCVYGGRLTACVLPERRLVSVASKSAYMQYK 737 LG R+++ V + + PRVIAIGDVHGC++EL+DL+R+ +Y PGDL++FLGDLV+KGP+S V+ ARE+G + VRGNH+FEV+RW +G + H IA L++ D W+ + PWY PDL ALFVHAGF G+ + KQNPR++MNMRS+ L GT TSK N PWAR W GP+TV FGHDA RGLQ + A+GLDTGCVYGGRLTAC+LPE+RLVSV ++ Y +Y+ Sbjct: 279 LGLRMVDAVTEKAKQ--RHPRVIAIGDVHGCIDELQDLLRECDYRPGDLVVFLGDLVSKGPDSMAVVQMAREIGAIGVRGNHDFEVVRWHQAIMSGVDPPVVGSEHFHIANCLTKADMKWMYSLPWYISSPDLGALFVHAGFVSGIRLAKQNPRLLMNMRSI-LPDGTVTSKFFNNWPWARLWDGPQTVLFGHDADRGLQQYEHAIGLDTGCVYGGRLTACILPEKRLVSVNARREYFKYR 516
BLAST of mRNA_L-elsbetiae_contig4910.12857.1 vs. uniprot
Match: A0A7S0CBS1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBS1_9STRA) HSP 1 Score: 272 bits (695), Expect = 8.450e-82 Identity = 131/223 (58.74%), Postives = 164/223 (73.54%), Query Frame = 3 Query: 78 PRVIAIGDVHGCMNELKDLVRKVEYWPGDLLLFLGDLVAKGPNSAGAVRTARELGGVSVRGNHEFEVLRWLDVTHNGHRRTP---TAHHRIAMSLSEEDGAWLKNSPWYFRCPDLDALFVHAGFTPGVSMRKQNPRMMMNMRSLTLEAGTATSKVVENRPWAREWLGPETVFFGHDAARGLQVLDQAMGLDTGCVYGGRLTACVLPERRLVSVASKSAYMQYK 737 PRVIAIGDVHGC++EL+ L+R+ +Y PGD+++FLGDLV+KGP+S V+ ARE+G + VRGNH+F V++W +G P + H IA +L ED WL N PWY +L ALFVHAGF GV ++KQNPR+MMNMRS+ L GT TSK N PWAR W GP+TV FGHDA RGLQ + A+GLDTGCVYGGRLTAC+LPE+RLVSV +K Y +Y+ Sbjct: 395 PRVIAIGDVHGCIDELQALLRRCDYRPGDMIVFLGDLVSKGPDSTSVVQMAREIGAIGVRGNHDFAVIQWHQAIASG-ADLPLIRSEHFHIACNLGREDMKWLHNLPWYISSKELSALFVHAGFVSGVRLQKQNPRLMMNMRSI-LPDGTVTSKFFNNWPWARVWDGPQTVLFGHDADRGLQHYENAIGLDTGCVYGGRLTACILPEKRLVSVNAKQQYFEYR 615
BLAST of mRNA_L-elsbetiae_contig4910.12857.1 vs. uniprot
Match: A0A7S4T7R7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T7R7_9STRA) HSP 1 Score: 276 bits (706), Expect = 7.910e-81 Identity = 137/241 (56.85%), Postives = 175/241 (72.61%), Query Frame = 3 Query: 21 LGWRVLEVVEARFESGLHPPRVIAIGDVHGCMNELKDLVRKVEYWPGDLLLFLGDLVAKGPNSAGAVRTARELGGVSVRGNHEFEVLRWLDVTHNGHRRTP--TAHHRIAMSLSEEDGAWLKNSPWYFRCPDLDALFVHAGFTPGVSMRKQNPRMMMNMRSLTLEAGTATSKVVENRPWAREWLGPETVFFGHDAARGLQVLDQAMGLDTGCVYGGRLTACVLPERRLVSVASKSAYMQYK 737 LG +L+ V R + P+VIAIGDVHGC++EL+ L+R+ +Y PGDL++FLGDLV+KGP+SA V+ ARELG + VRGNH+FEV+RW +G + H +IA +LS+ED W+ + PWY L ALFVHAGF G+ + KQNPR++MNMRS+ L GT TSK N PWAR W GP+TV FGHDA RGLQ + A+GLDTGCVYGGRLTAC+LPE+RLVSV++K Y QY+ Sbjct: 697 LGPLLLDAVVERARQ--NQPKVIAIGDVHGCIDELQALLRQCDYSPGDLIVFLGDLVSKGPDSASVVQMARELGAIGVRGNHDFEVIRWHQAVMSGADPPVMGSEHFQIATALSKEDLKWMYSLPWYINSQSLGALFVHAGFVSGIRLGKQNPRLLMNMRSI-LPDGTVTSKFFNNWPWARLWDGPQTVLFGHDADRGLQQYEHAIGLDTGCVYGGRLTACILPEKRLVSVSAKREYFQYR 934
BLAST of mRNA_L-elsbetiae_contig4910.12857.1 vs. uniprot
Match: A0A448Z7H3_9STRA (Metallophos domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7H3_9STRA) HSP 1 Score: 276 bits (707), Expect = 2.300e-80 Identity = 135/242 (55.79%), Postives = 175/242 (72.31%), Query Frame = 3 Query: 18 ALGWRVLEVVEARFESGLHPPRVIAIGDVHGCMNELKDLVRKVEYWPGDLLLFLGDLVAKGPNSAGAVRTARELGGVSVRGNHEFEVLRWLDVTHNGHRR--TPTAHHRIAMSLSEEDGAWLKNSPWYFRCPDLDALFVHAGFTPGVSMRKQNPRMMMNMRSLTLEAGTATSKVVENRPWAREWLGPETVFFGHDAARGLQVLDQAMGLDTGCVYGGRLTACVLPERRLVSVASKSAYMQYK 737 +LG R+++ V + + PRVIAIGDVHGC++EL+DL+R+ +Y PGDL++FLGDLV+KGP+S V+ ARE+G + VRGNH+FEV+RW +G + H IA L++ D W+ + PWY PDL ALFVHAGF G+ + KQNPR+MMNMRS+ L GT TSK N PWAR W GP+TV FGHDA RGLQ + A+GLDTGCVYGGRLTAC+LPE+RLVSV ++ Y +Y+ Sbjct: 809 SLGLRMVDAVVEKAKQ--RHPRVIAIGDVHGCIDELQDLLRECDYRPGDLVVFLGDLVSKGPDSMAVVQMAREIGAIGVRGNHDFEVVRWHQAIMSGVDPPVVGSEHFHIANCLTKADMKWMYSLPWYISSPDLGALFVHAGFVSGIRLAKQNPRLMMNMRSI-LPDGTVTSKFFNNWPWARLWDGPQTVLFGHDADRGLQQYEHAIGLDTGCVYGGRLTACILPEKRLVSVGARREYFKYR 1047
BLAST of mRNA_L-elsbetiae_contig4910.12857.1 vs. uniprot
Match: A0A1Z5KJX1_FISSO (Metallophos domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJX1_FISSO) HSP 1 Score: 275 bits (702), Expect = 3.300e-80 Identity = 134/241 (55.60%), Postives = 173/241 (71.78%), Query Frame = 3 Query: 21 LGWRVLEVVEARFESGLHPPRVIAIGDVHGCMNELKDLVRKVEYWPGDLLLFLGDLVAKGPNSAGAVRTARELGGVSVRGNHEFEVLRWLDVTHNGHRR--TPTAHHRIAMSLSEEDGAWLKNSPWYFRCPDLDALFVHAGFTPGVSMRKQNPRMMMNMRSLTLEAGTATSKVVENRPWAREWLGPETVFFGHDAARGLQVLDQAMGLDTGCVYGGRLTACVLPERRLVSVASKSAYMQYK 737 +G R+++ V R + PRVIAIGDVHGC++EL+DL+R+ +Y PGDL++FLGDLV KGP+S V+ ARE+G + VRGNH+FEV+RW +G + H+ IA LS+ D W+ + PWY DL LFVHAGF G+ + KQNPR+MMNMRS+ L GT TSK N PWAR W GP+TV FGHDA RGLQ + A+GLDTGCVYGGRLTAC+LPE+RLVSV+++ Y +Y+ Sbjct: 705 IGLRLVDAVVERAKQ--RQPRVIAIGDVHGCIDELQDLLRECDYRPGDLVVFLGDLVCKGPDSISVVQMAREIGAIGVRGNHDFEVVRWHQAIISGVDPPVVRSEHYHIASCLSKADMKWMYSLPWYVSSQDLSTLFVHAGFVSGIRLAKQNPRLMMNMRSI-LPDGTVTSKFFNNWPWARLWDGPQTVLFGHDADRGLQQYEHAIGLDTGCVYGGRLTACILPEKRLVSVSARREYFKYR 942
BLAST of mRNA_L-elsbetiae_contig4910.12857.1 vs. uniprot
Match: A0A7S2YIS4_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YIS4_9STRA) HSP 1 Score: 275 bits (703), Expect = 5.600e-80 Identity = 138/243 (56.79%), Postives = 173/243 (71.19%), Query Frame = 3 Query: 21 LGWRVLEVVEARFESGLHPPRVIAIGDVHGCMNELKDLVRKVEYWPGDLLLFLGDLVAKGPNSAGAVRTARELGGVSVRGNHEFEVLRWLDVTHNGHRRTPTA----HHRIAMSLSEEDGAWLKNSPWYFRCPDLDALFVHAGFTPGVSMRKQNPRMMMNMRSLTLEAGTATSKVVENRPWAREWLGPETVFFGHDAARGLQVLDQAMGLDTGCVYGGRLTACVLPERRLVSVASKSAYMQYK 737 +G R+++ V R + PRVIAIGDVHGC++EL+DL+R+ +Y PGDL++FLGDLV KGP+S V+ ARE+G + VRGNH+FEV+RW G P A H IA LS+ED W+ N PWY DL ALFVHAGF G+ + KQNPR+MMNMRS+ L GT TSK N PWAR W GP+TV FGHDA RGLQ + A+GLDTGCVYGGRLTA +LPER+LVSV+++ Y +Y+ Sbjct: 773 IGLRLVDAVTERAKQ--RQPRVIAIGDVHGCIDELQDLLRQCQYAPGDLVVFLGDLVCKGPDSISVVQMAREIGALGVRGNHDFEVIRWHRAIKAG--VDPPALRSEHFHIASCLSKEDVKWMHNLPWYISSKDLSALFVHAGFVSGIRLAKQNPRLMMNMRSI-LPDGTVTSKFFNNWPWARLWDGPQTVLFGHDADRGLQQYEHAIGLDTGCVYGGRLTAYILPERKLVSVSARREYFKYR 1010 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4910.12857.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4910.12857.1 >prot_L-elsbetiae_contig4910.12857.1 ID=prot_L-elsbetiae_contig4910.12857.1|Name=mRNA_L-elsbetiae_contig4910.12857.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=268bp MNELKDLVRKVEYWPGDLLLFLGDLVAKGPNSAGAVRTARELGGVSVRGNback to top mRNA from alignment at L-elsbetiae_contig4910:4728..12031+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4910.12857.1 ID=mRNA_L-elsbetiae_contig4910.12857.1|Name=mRNA_L-elsbetiae_contig4910.12857.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7304bp|location=Sequence derived from alignment at L-elsbetiae_contig4910:4728..12031+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4910:4728..12031+ >mRNA_L-elsbetiae_contig4910.12857.1 ID=mRNA_L-elsbetiae_contig4910.12857.1|Name=mRNA_L-elsbetiae_contig4910.12857.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1608bp|location=Sequence derived from alignment at L-elsbetiae_contig4910:4728..12031+ (Laminarionema elsbetiae ELsaHSoW15)back to top |